Guide to the Human Genome
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Name: SMOX Sequence: fasta or formatted (555aa) NCBI GI: 28559074
Description:

spermine oxidase isoform 1

Referenced in:

Urea Cycle, Nitric Oxide, and Polyamines

Other entries for this name:
alt prot [502aa] spermine oxidase isoform 2
alt prot [190aa] spermine oxidase isoform 3
alt prot [532aa] spermine oxidase isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         37           3
 C cysteine            2.0         11           1
 D aspartate           4.7         26           2
 E glutamate           9.9         55           2
 F phenylalanine       3.4         19           2
 G glycine             9.4         52           2
 H histidine           3.6         20           2
 I isoleucine          4.7         26           2
 K lysine              3.4         19           1
 L leucine             7.9         44           2
 M methionine          1.4          8           1
 N asparagine          2.7         15           1
 P proline             5.6         31           2
 Q glutamine           3.6         20           2
 R arginine            6.7         37           3
 S serine              7.4         41           3
 T threonine           5.0         28           2
 V valine              6.8         38           3
 W tryptophan          1.8         10           1
 Y tyrosine            3.2         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spermine oxidase isoform 1 
SMOX                  0.875   spermine oxidase isoform 2 
SMOX                  0.861   spermine oxidase isoform 4 
PAOX                  0.302   polyamine oxidase isoform 1 
SMOX                  0.238   spermine oxidase isoform 3 
PAOX                  0.202   polyamine oxidase isoform 4 
PAOX                  0.113   polyamine oxidase isoform 2 
KDM1                  0.092   amine oxidase (flavin containing) domain 2 isoform a...
KDM1                  0.092   amine oxidase (flavin containing) domain 2 isoform b...
AOF1                  0.073   amine oxidase (flavin containing) domain 1 
IL4I1                 0.023   interleukin 4 induced 1 isoform 1 precursor 
IL4I1                 0.023   interleukin 4 induced 1 isoform 2 
MAOA                  0.021   monoamine oxidase A 
MAOB                  0.019   monoamine oxidase B 
FMO1                  0.010   flavin containing monooxygenase 1 
FMO3                  0.009   flavin containing monooxygenase 3 isoform 2 
FMO3                  0.009   flavin containing monooxygenase 3 isoform 1 
PCYOX1                0.009   prenylcysteine oxidase 1 
DPYD                  0.008   dihydropyrimidine dehydrogenase isoform 1 
PPOX                  0.007   protoporphyrinogen oxidase 
PPOX                  0.007   protoporphyrinogen oxidase 
AIFM3                 0.007   apoptosis-inducing factor, mitochondrion-associated...
AIFM3                 0.007   apoptosis-inducing factor, mitochondrion-associated,...
AIFM3                 0.007   apoptosis-inducing factor, mitochondrion-associated,...
RETSAT                0.007   all-trans-13,14-dihydroretinol saturase 
DMGDH                 0.006   dimethylglycine dehydrogenase precursor 
FILIP1L               0.006   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.006   filamin A interacting protein 1-like isoform 2 [Hom...
FILIP1L               0.006   filamin A interacting protein 1-like isoform 1 [Hom...
PCYOX1L               0.006   prenylcysteine oxidase 1 like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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