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Name: CACNG2 Sequence: fasta or formatted (323aa) NCBI GI: 5174405
Description:

voltage-dependent calcium channel gamma-2 subunit

Referenced in:

Calcium and TRP Cation Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         28           2
 C cysteine            1.9          6           2
 D aspartate           4.6         15           1
 E glutamate           4.0         13           2
 F phenylalanine       5.3         17           2
 G glycine             5.9         19           2
 H histidine           2.5          8           1
 I isoleucine          6.8         22           2
 K lysine              4.6         15           2
 L leucine             7.4         24           2
 M methionine          2.5          8           1
 N asparagine          4.3         14           1
 P proline             3.1         10           1
 Q glutamine           2.2          7           1
 R arginine            6.5         21           2
 S serine             11.8         38           3
 T threonine           7.4         24           2
 V valine              5.0         16           1
 W tryptophan          0.9          3           1
 Y tyrosine            4.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   voltage-dependent calcium channel gamma-2 subunit [Ho... 
CACNG3                0.728   voltage-dependent calcium channel gamma-3 subunit [Ho...
CACNG4                0.564   voltage-dependent calcium channel gamma-4 subunit [Ho...
CACNG8                0.510   voltage-dependent calcium channel gamma-8 subunit [H...
CACNG5                0.153   voltage-dependent calcium channel gamma-5 subunit is...
CACNG7                0.141   voltage-dependent calcium channel gamma-7 subunit [H...
CACNG5                0.133   voltage-dependent calcium channel gamma-5 subunit iso...
TMEM114               0.051   PREDICTED: transmembrane protein 114 
TMEM114               0.051   transmembrane protein 114 
TMEM114               0.048   PREDICTED: transmembrane protein 114, partial [Homo...
CACNG1                0.032   voltage-dependent calcium channel gamma-1 subunit [Ho...
LOC644070             0.023   PREDICTED: germ cell-specific gene 1-like protein 2...
LOC644070             0.023   PREDICTED: germ cell-specific gene 1-like protein 2...
LOC644070             0.023   PREDICTED: germ cell-specific gene 1-like protein 2...
LIM2                  0.021   lens intrinsic membrane protein 2, 19kDa isoform 2 ...
TMEM114               0.021   PREDICTED: transmembrane protein 114 
CLDN4                 0.021   claudin 4 
CLDN6                 0.018   claudin 6 
CLDN20                0.016   claudin 20 
GSG1L                 0.016   GSG1-like isoform 1 
CLDN8                 0.016   claudin 8 
CLDN9                 0.014   claudin 9 
CLDN18                0.014   claudin 18 isoform 1 
CLDN10                0.014   claudin 10 isoform b 
NOLC1                 0.013   nucleolar and coiled-body phosphoprotein 1 
CLDN10                0.013   claudin 10 isoform a 
EMP1                  0.013   epithelial membrane protein 1 
NKG7                  0.013   natural killer cell group 7 sequence 
PMP22                 0.013   peripheral myelin protein 22 
PMP22                 0.013   peripheral myelin protein 22 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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