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Search of human proteins with 24308257
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308257 vesicle amine transport protein 1 homolog (T.
californica)-like [Homo sapiens]
(419 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308257 vesicle amine transport protein 1 homolog (T. califo... 838 0.0
gi|18379349 vesicle amine transport protein 1 [Homo sapiens] 316 2e-86
gi|194239674 crystallin, zeta isoform a [Homo sapiens] 154 1e-37
gi|13236495 crystallin, zeta isoform a [Homo sapiens] 154 1e-37
gi|22538446 tumor protein p53 inducible protein 3 [Homo sapiens] 130 3e-30
gi|22538444 tumor protein p53 inducible protein 3 [Homo sapiens] 130 3e-30
gi|194239676 crystallin, zeta isoform b [Homo sapiens] 120 2e-27
gi|28557745 zinc binding alcohol dehydrogenase domain containing... 83 4e-16
gi|67078404 trans-2-enoyl-CoA reductase, mitochondrial isoform a... 77 2e-14
gi|197927207 crystallin, zeta isoform c [Homo sapiens] 75 1e-13
gi|67078406 trans-2-enoyl-CoA reductase, mitochondrial isoform b... 72 1e-12
gi|41872631 fatty acid synthase [Homo sapiens] 70 5e-12
gi|47519420 reticulon 4 interacting protein 1 precursor [Homo sa... 54 2e-07
gi|90669511 crystallin, zeta-like 1 [Homo sapiens] 54 2e-07
gi|156627571 sorbitol dehydrogenase [Homo sapiens] 48 2e-05
gi|34577061 class I alcohol dehydrogenase, beta subunit [Homo sa... 43 6e-04
gi|4501933 class I alcohol dehydrogenase, gamma subunit [Homo sa... 42 8e-04
gi|4501929 class I alcohol dehydrogenase, alpha subunit [Homo sa... 40 0.005
gi|71743840 class IV alcohol dehydrogenase, mu or sigma subunit ... 39 0.011
gi|217272816 RAD51-like 3 isoform 6 [Homo sapiens] 33 0.37
gi|71565152 class II alcohol dehydrogenase, pi subunit [Homo sap... 33 0.48
gi|189491778 nephrocystin 1 isoform 4 [Homo sapiens] 33 0.48
gi|156523966 class V alcohol dehydrogenase isoform 1 [Homo sapiens] 33 0.63
gi|4501939 class V alcohol dehydrogenase isoform 2 [Homo sapiens] 33 0.63
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 32 1.1
gi|79749430 FRAS1-related extracellular matrix protein 2 precurs... 32 1.1
gi|71565154 class III alcohol dehydrogenase, chi subunit [Homo s... 31 1.8
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 31 2.4
gi|28274705 family with sequence similarity 9, member A [Homo sa... 30 3.1
gi|10864057 protamine 3 [Homo sapiens] 30 4.1
>gi|24308257 vesicle amine transport protein 1 homolog (T.
californica)-like [Homo sapiens]
Length = 419
Score = 838 bits (2165), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MAKEGVEKAEETEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFR 60
MAKEGVEKAEETEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFR
Sbjct: 1 MAKEGVEKAEETEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFR 60
Query: 61 KAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY 120
KAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY
Sbjct: 61 KAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY 120
Query: 121 EIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLRE 180
EIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLRE
Sbjct: 121 EIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLRE 180
Query: 181 GMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVK 240
GMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVK
Sbjct: 181 GMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVK 240
Query: 241 RISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEK 300
RISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEK
Sbjct: 241 RISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEK 300
Query: 301 VNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEV 360
VNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEV
Sbjct: 301 VNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEV 360
Query: 361 KEAMQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ 419
KEAMQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ
Sbjct: 361 KEAMQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ 419
>gi|18379349 vesicle amine transport protein 1 [Homo sapiens]
Length = 393
Score = 316 bits (810), Expect = 2e-86
Identities = 163/365 (44%), Positives = 234/365 (64%), Gaps = 8/365 (2%)
Query: 19 EAGKEPAEGGGGDGSHRLGDAQEM-RAVVLAGFGGLNKLRLFRK--AMPEPQDGELKIRV 75
EA +P +G+ + + R +VL GFGG +K++L + A P P G+L +R+
Sbjct: 24 EAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRL 83
Query: 76 KACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAW 135
+ACGLNF DLM RQG D P P+ PG E +G+V A+G+ V + GDRVM W
Sbjct: 84 RACGLNFADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMW 143
Query: 136 AEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQ 195
E V P + IP+ M+F EAAA +N++TAY++LF+ NL+ G SVLVH A GGVG
Sbjct: 144 QEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGHSVLVHMAAGGVGM 203
Query: 196 AVAQLCSTVPNVTVFGTASTFKHEAIKDS-VTHLFD-RNADYVQEVKRISAEGVDIVLDC 253
A QLC TV NVTVFGTAS KHEA+K++ VTH D DYV E+K+IS +GVDIV+D
Sbjct: 204 AAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDP 263
Query: 254 LCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVI 313
L G +T KG +LLKP+G + YG +N++TG ++ + A++WW V ++L + N+ +
Sbjct: 264 LGGSDTAKGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAV 323
Query: 314 AGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNI 373
GF +L + G L+ GVV +L+ LYNQ IKP +DS+W E+V +AM+++ ++ N+
Sbjct: 324 CGF---HLGYLDGEVELVSGVVARLLALYNQGHIKPHIDSVWPFEKVADAMKQMQEKKNV 380
Query: 374 GKLIL 378
GK++L
Sbjct: 381 GKVLL 385
>gi|194239674 crystallin, zeta isoform a [Homo sapiens]
Length = 329
Score = 154 bits (390), Expect = 1e-37
Identities = 112/347 (32%), Positives = 176/347 (50%), Gaps = 37/347 (10%)
Query: 42 MRAVVLAGFGGLNKLRLFRK-AMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPL 100
MRAV + FGG L+L A+P P+D ++ I+V ACG+N ++ +R G P P
Sbjct: 8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 67
Query: 101 VPGFECSGIVEALGDSVKGYEIGDRVMAFVNYN-AWAEVVCTPVEFVYKIPDDMSFSEAA 159
PG + +G++EA+GD+ ++ GDRV + +AE VYK+P+ + F + A
Sbjct: 68 TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGA 127
Query: 160 AFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHE 219
A + + TAY L A ++ G SVLVH A GGVG A Q+ + + GTA T + +
Sbjct: 128 AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQ 186
Query: 220 AI--KDSVTHLFD-RNADYVQEVKR-ISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILY 275
I ++ +F+ R +Y+ ++K+ + +G+DI+++ L N K LSLL G I+
Sbjct: 187 KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV 246
Query: 276 GSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLL---FKQGRAGLIR 332
GS + ++NP + I G +L + F+Q A L
Sbjct: 247 GSRGTI------------------EINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQA 288
Query: 333 GVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQR-IHDRGNIGKLIL 378
G+ IG +KPV+ S + LE+V EA + IH G GK+IL
Sbjct: 289 GME---IGW-----LKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL 327
>gi|13236495 crystallin, zeta isoform a [Homo sapiens]
Length = 329
Score = 154 bits (390), Expect = 1e-37
Identities = 112/347 (32%), Positives = 176/347 (50%), Gaps = 37/347 (10%)
Query: 42 MRAVVLAGFGGLNKLRLFRK-AMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPL 100
MRAV + FGG L+L A+P P+D ++ I+V ACG+N ++ +R G P P
Sbjct: 8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 67
Query: 101 VPGFECSGIVEALGDSVKGYEIGDRVMAFVNYN-AWAEVVCTPVEFVYKIPDDMSFSEAA 159
PG + +G++EA+GD+ ++ GDRV + +AE VYK+P+ + F + A
Sbjct: 68 TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGA 127
Query: 160 AFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHE 219
A + + TAY L A ++ G SVLVH A GGVG A Q+ + + GTA T + +
Sbjct: 128 AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQ 186
Query: 220 AI--KDSVTHLFD-RNADYVQEVKR-ISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILY 275
I ++ +F+ R +Y+ ++K+ + +G+DI+++ L N K LSLL G I+
Sbjct: 187 KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV 246
Query: 276 GSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLL---FKQGRAGLIR 332
GS + ++NP + I G +L + F+Q A L
Sbjct: 247 GSRGTI------------------EINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQA 288
Query: 333 GVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQR-IHDRGNIGKLIL 378
G+ IG +KPV+ S + LE+V EA + IH G GK+IL
Sbjct: 289 GME---IGW-----LKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL 327
>gi|22538446 tumor protein p53 inducible protein 3 [Homo sapiens]
Length = 332
Score = 130 bits (326), Expect = 3e-30
Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 23/337 (6%)
Query: 51 GGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIV 110
GG L + A P P +GE+ ++V A LN DLM RQG D PP + G E SG V
Sbjct: 10 GGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHV 69
Query: 111 EALGDSVKGY-EIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAY 169
LG +G+ +IGD MA + A+ V P + IP+ ++ ++AAA P ++TA+
Sbjct: 70 AELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAF 129
Query: 170 VMLFEVANLREGMSVLVHSAGGGVGQAVAQL---CSTVPNVTVFGTASTFKHEAIKDSVT 226
+L V N++ G VL+H+ GVG A QL +P VT E + +
Sbjct: 130 QLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAG 189
Query: 227 HLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETK 286
+ + +K GV+++LDC+ G K ++ L G ++LYG ++ G
Sbjct: 190 FNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYG---LMGGGDI 246
Query: 287 SFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYN--- 343
+ F+K L++ +I SLL + + L+ E+++ ++
Sbjct: 247 NGPLFSK-----------LLFKRGSLIT--SLLRSRDNKYKQMLVNAFTEQILPHFSTEG 293
Query: 344 QKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDV 380
+++ PV+D ++ + E++EA + + NIGK++L++
Sbjct: 294 PQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 330
>gi|22538444 tumor protein p53 inducible protein 3 [Homo sapiens]
Length = 332
Score = 130 bits (326), Expect = 3e-30
Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 23/337 (6%)
Query: 51 GGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIV 110
GG L + A P P +GE+ ++V A LN DLM RQG D PP + G E SG V
Sbjct: 10 GGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHV 69
Query: 111 EALGDSVKGY-EIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAY 169
LG +G+ +IGD MA + A+ V P + IP+ ++ ++AAA P ++TA+
Sbjct: 70 AELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAF 129
Query: 170 VMLFEVANLREGMSVLVHSAGGGVGQAVAQL---CSTVPNVTVFGTASTFKHEAIKDSVT 226
+L V N++ G VL+H+ GVG A QL +P VT E + +
Sbjct: 130 QLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAG 189
Query: 227 HLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETK 286
+ + +K GV+++LDC+ G K ++ L G ++LYG ++ G
Sbjct: 190 FNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYG---LMGGGDI 246
Query: 287 SFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYN--- 343
+ F+K L++ +I SLL + + L+ E+++ ++
Sbjct: 247 NGPLFSK-----------LLFKRGSLIT--SLLRSRDNKYKQMLVNAFTEQILPHFSTEG 293
Query: 344 QKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDV 380
+++ PV+D ++ + E++EA + + NIGK++L++
Sbjct: 294 PQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 330
>gi|194239676 crystallin, zeta isoform b [Homo sapiens]
Length = 295
Score = 120 bits (301), Expect = 2e-27
Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 6/210 (2%)
Query: 42 MRAVVLAGFGGLNKLRLFRK-AMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPL 100
MRAV + FGG L+L A+P P+D ++ I+V ACG+N ++ +R G P P
Sbjct: 8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 67
Query: 101 VPGFECSGIVEALGDSVKGYEIGDRVMAFVNYN-AWAEVVCTPVEFVYKIPDDMSFSEAA 159
PG + +G++EA+GD+ ++ GDRV + +AE VYK+P+ + F + A
Sbjct: 68 TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGA 127
Query: 160 AFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHE 219
A + + TAY L A ++ G SVLVH A GGVG A Q+ + + GTA T + +
Sbjct: 128 AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQ 186
Query: 220 AI--KDSVTHLFD-RNADYVQEVKRISAEG 246
I ++ +F+ R +Y+ ++K + + G
Sbjct: 187 KIVLQNGAHEVFNHREVNYIDKIKVVGSRG 216
>gi|28557745 zinc binding alcohol dehydrogenase domain containing 2
[Homo sapiens]
Length = 377
Score = 83.2 bits (204), Expect = 4e-16
Identities = 83/269 (30%), Positives = 121/269 (44%), Gaps = 21/269 (7%)
Query: 63 MPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG-YE 121
+P P DG+L +R + G+N D+ G D K P GFE G V ALG S Y
Sbjct: 57 VPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYT 116
Query: 122 IGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREG 181
+G V A++ ++AE P +P E ++ TAY+ L E+ L EG
Sbjct: 117 VGQAV-AYMAPGSFAEYTVVPASIATPVPSVK--PEYLTLLVSGTTAYISLKELGGLSEG 173
Query: 182 MSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQE--- 238
VLV +A GG GQ QL S V GT S+ + A S+ DR +Y E
Sbjct: 174 KKVLVTAAAGGTGQFAMQL-SKKAKCHVIGTCSSDEKSAFLKSLG--CDRPINYKTEPVG 230
Query: 239 --VKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTG-ETKSFFSFAKSW 295
+K+ EGVD+V + + G + L G I+ G ++G +T + S K+
Sbjct: 231 TVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIG---FISGYQTPTGLSPVKA- 286
Query: 296 WQVEKVNPIKLYEENKVIAGFSLLNLLFK 324
P KL +++ + GF L + L K
Sbjct: 287 ----GTLPAKLLKKSASVQGFFLNHYLSK 311
>gi|67078404 trans-2-enoyl-CoA reductase, mitochondrial isoform a
[Homo sapiens]
Length = 373
Score = 77.4 bits (189), Expect = 2e-14
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 12/268 (4%)
Query: 21 GKEPAEGGGGDGSHRLGDAQE---MRAVVLAGFGGLNKL-RLFRKAMPEPQDGELKIRVK 76
G PA G G + + E +RA+V G K+ L + + ++++++
Sbjct: 19 GLLPASGCHGPAASSYSASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKML 78
Query: 77 ACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVM-AFVNYNAW 135
A +N D+ + QGN P+ P V G E V A+G +V G + GD V+ A W
Sbjct: 79 AAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTW 138
Query: 136 AEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQ 195
E + ++P D+ AA +N TAY ML + L+ G SV+ +++ GVGQ
Sbjct: 139 RTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQ 198
Query: 196 AVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGV-------D 248
AV Q+ + + T+ + + D + L + +E++R +
Sbjct: 199 AVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPR 258
Query: 249 IVLDCLCGDNTGKGLSLLKPLGTYILYG 276
+ L+C+ G ++ + L L GT + YG
Sbjct: 259 LALNCVGGKSSTELLRQLARGGTMVTYG 286
>gi|197927207 crystallin, zeta isoform c [Homo sapiens]
Length = 192
Score = 74.7 bits (182), Expect = 1e-13
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 35/215 (16%)
Query: 172 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI--KDSVTHLF 229
L A ++ G SVLVH A GGVG A Q+ + + GTA T + + I ++ +F
Sbjct: 3 LLSSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVF 61
Query: 230 D-RNADYVQEVKR-ISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKS 287
+ R +Y+ ++K+ + +G+DI+++ L N K LSLL G I+ GS +
Sbjct: 62 NHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTI------ 115
Query: 288 FFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLL---FKQGRAGLIRGVVEKLIGLYNQ 344
++NP + I G +L + F+Q A L G+ IG
Sbjct: 116 ------------EINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGME---IGW--- 157
Query: 345 KKIKPVVDSLWALEEVKEAMQR-IHDRGNIGKLIL 378
+KPV+ S + LE+V EA + IH G GK+IL
Sbjct: 158 --LKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL 190
>gi|67078406 trans-2-enoyl-CoA reductase, mitochondrial isoform b
[Homo sapiens]
Length = 297
Score = 71.6 bits (174), Expect = 1e-12
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 77 ACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVM-AFVNYNAW 135
A +N D+ + QGN P+ P V G E V A+G +V G + GD V+ A W
Sbjct: 3 AAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTW 62
Query: 136 AEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQ 195
E + ++P D+ AA +N TAY ML + L+ G SV+ +++ GVGQ
Sbjct: 63 RTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQ 122
Query: 196 AVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGV-------D 248
AV Q+ + + T+ + + D + L + +E++R +
Sbjct: 123 AVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPR 182
Query: 249 IVLDCLCGDNTGKGLSLLKPLGTYILYG 276
+ L+C+ G ++ + L L GT + YG
Sbjct: 183 LALNCVGGKSSTELLRQLARGGTMVTYG 210
>gi|41872631 fatty acid synthase [Homo sapiens]
Length = 2511
Score = 69.7 bits (169), Expect = 5e-12
Identities = 66/249 (26%), Positives = 103/249 (41%), Gaps = 26/249 (10%)
Query: 60 RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG 119
R A P +L V LNF D+M+ G + +PG S DS+ G
Sbjct: 1552 RHAQPTCPGAQL-CTVYYASLNFRDIMLATGKLS----PDAIPGKWTSQ------DSLLG 1600
Query: 120 YEI------GDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLF 173
E G RVM V A V +F++ +P + + EAA+ P+ + TAY L
Sbjct: 1601 MEFSGRDASGKRVMGLVPAKGLATSVLLSPDFLWDVPSNWTLEEAASVPVVYSTAYYALV 1660
Query: 174 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI-------KDSVT 226
+R G ++L+HS GGVGQA + ++ VF T + + A DS +
Sbjct: 1661 VRGRVRPGETLLIHSGSGGVGQAAIAIALSL-GCRVFTTVGSAEKRAYLQARFPQLDSTS 1719
Query: 227 HLFDRNADYVQEVK-RISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGET 285
R+ + Q V +GVD+VL+ L + + L G ++ G ++
Sbjct: 1720 FANSRDTSFEQHVLWHTGGKGVDLVLNSLAEEKLQASVRCLATHGRFLEIGKFDLSQNHP 1779
Query: 286 KSFFSFAKS 294
F K+
Sbjct: 1780 LGMAIFLKN 1788
>gi|47519420 reticulon 4 interacting protein 1 precursor [Homo
sapiens]
Length = 396
Score = 54.3 bits (129), Expect = 2e-07
Identities = 92/372 (24%), Positives = 150/372 (40%), Gaps = 71/372 (19%)
Query: 52 GLNKLRLFRKAMPEP---QDGELKIRVKACGLNFIDLMVRQG------NIDNPP------ 96
G N++ F + M P E+ ++V A +N ID+ +R G N+ P
Sbjct: 52 GKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIK 111
Query: 97 --KTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFV---NYNAWAEVVCTPVEFVYKIPD 151
+ PL G + SG+V G VK ++ GD V A V +E V V P
Sbjct: 112 GEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPK 171
Query: 152 DMSFSEAAAFPMNFVTAYVMLFEVANLRE----GMSVLVHSAGGGVGQAVAQLCSTVPNV 207
++ ++AA+ P +TA+ + +V L + G VL+ A GGVG
Sbjct: 172 SLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG------------- 218
Query: 208 TVFGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLK 267
TF + +K H+ + E+ R G D V+D G + + L LK
Sbjct: 219 -------TFAIQVMKAWDAHVTAVCSQDASELVR--KLGADDVIDYKSG-SVEEQLKSLK 268
Query: 268 PLGTYILYGSSNMVTGETKSFF-SFAKSW---WQVEKVNPIKLYEENKVIAGFSLLNLLF 323
P +IL + V G T+++ F K W V V P L + IA L +
Sbjct: 269 PF-DFIL----DNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVT 323
Query: 324 KQGRA--GLIRGV-------------VEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIH 368
+A +GV ++ + L + KI+PV++ + +V EA ++
Sbjct: 324 VGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVE 383
Query: 369 DRGNIGKLILDV 380
GK +++V
Sbjct: 384 RGHARGKTVINV 395
>gi|90669511 crystallin, zeta-like 1 [Homo sapiens]
Length = 349
Score = 54.3 bits (129), Expect = 2e-07
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 60 RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVP-GFECSGIVEALGDSVK 118
++ +P +D +K++VKAC L+ I+ + + K L P G E +GIV +G V
Sbjct: 22 KEDLPVTEDNFVKLQVKACALSQINTKLLA---EMKMKKDLFPVGREIAGIVLDVGSKVS 78
Query: 119 GYEIGDRVMAFVNYNA----WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFE 174
++ D V+ + ++ EVV ++ P+ ++++EAA + V AY L
Sbjct: 79 FFQPDDEVVGILPLDSEDPGLCEVVRVHEHYLVHKPEKVTWTEAAGSIRDGVRAYTALHY 138
Query: 175 VANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKH----EAIKDSVTHLFD 230
+++L G SVL+ G QL V TA + + E + + + D
Sbjct: 139 LSHLSPGKSVLIMDGASAFGTIAIQLAHH-RGAKVISTACSLEDKQCLERFRPPIARVID 197
Query: 231 RNADYVQEVKRISAE----GVDIVLD 252
+ V + E GVDIVLD
Sbjct: 198 VSNGKVHVAESCLEETGGLGVDIVLD 223
>gi|156627571 sorbitol dehydrogenase [Homo sapiens]
Length = 357
Score = 47.8 bits (112), Expect = 2e-05
Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 30/138 (21%)
Query: 52 GLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQ-GNIDN-PPKTPLVPGFECSGI 109
G LRL +PEP E+ +R+ + G+ D+ + G I N K P+V G E SG
Sbjct: 16 GPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGT 75
Query: 110 VEALGDSVKGYEIGDRV---------------MAFVNYNAWAEVVCTPVE---------- 144
VE +G SVK + GDRV M N + TP +
Sbjct: 76 VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKH 135
Query: 145 ---FVYKIPDDMSFSEAA 159
F YK+PD+++F E A
Sbjct: 136 NAAFCYKLPDNVTFEEGA 153
>gi|34577061 class I alcohol dehydrogenase, beta subunit [Homo
sapiens]
Length = 375
Score = 42.7 bits (99), Expect = 6e-04
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 66 PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDR 125
P+ E++I++ A G+ D V GN+ P P++ G E +GIVE++G+ V + GD+
Sbjct: 32 PKAYEVRIKMVAVGICHTDDHVVSGNLVTP--LPVILGHEAAGIVESVGEGVTTVKPGDK 89
Query: 126 VMAFVNYNAWAEVVCTPVEFVYKIPDDM 153
V+ VC E Y + +D+
Sbjct: 90 VIPLFTPQCGKCRVCKNPESNYCLKNDL 117
>gi|4501933 class I alcohol dehydrogenase, gamma subunit [Homo
sapiens]
Length = 375
Score = 42.4 bits (98), Expect = 8e-04
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 66 PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDR 125
P+ E++I++ A G+ D V GN+ P P++ G E +GIVE++G+ V + GD+
Sbjct: 32 PKAHEVRIKMVAAGICRSDEHVVSGNLVTP--LPVILGHEAAGIVESVGEGVTTVKPGDK 89
Query: 126 VMAFVNYNAWAEVVCTPVEFVYKIPDDM 153
V+ +C E Y + +D+
Sbjct: 90 VIPLFTPQCGKCRICKNPESNYCLKNDL 117
>gi|4501929 class I alcohol dehydrogenase, alpha subunit [Homo
sapiens]
Length = 375
Score = 39.7 bits (91), Expect = 0.005
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 66 PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDR 125
P+ E++I++ A G+ D V G + P P++ G E +GIVE++G+ V + GD+
Sbjct: 32 PKAHEVRIKMVAVGICGTDDHVVSGTMVTP--LPVILGHEAAGIVESVGEGVTTVKPGDK 89
Query: 126 VMAFVNYNAWAEVVCTPVEFVYKIPDDMS 154
V+ +C E Y + +D+S
Sbjct: 90 VIPLAIPQCGKCRICKNPESNYCLKNDVS 118
>gi|71743840 class IV alcohol dehydrogenase, mu or sigma subunit
[Homo sapiens]
Length = 386
Score = 38.5 bits (88), Expect = 0.011
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 66 PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDR 125
P+ E++I++ A G+ D V +G + + K P++ G E +GIVE++G+ V + GD+
Sbjct: 44 PKTKEVRIKILATGICRTDDHVIKGTMVS--KFPVIVGHEATGIVESIGEGVTTVKPGDK 101
Query: 126 VM 127
V+
Sbjct: 102 VI 103
>gi|217272816 RAD51-like 3 isoform 6 [Homo sapiens]
Length = 348
Score = 33.5 bits (75), Expect = 0.37
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 327 RAGLIRGVVEKLIGLYNQKKIKPVVDSLWA-LEEVKE------AMQRIHDRGNIGKLIL 378
R GL G+ E++I L +IK VVD + A LEEV + R H GN+G L L
Sbjct: 5 RVGLCPGLTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKTWRAHSSGNLGGLQL 63
>gi|71565152 class II alcohol dehydrogenase, pi subunit [Homo
sapiens]
Length = 380
Score = 33.1 bits (74), Expect = 0.48
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 66 PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDR 125
P+ E++I++ A L D V + P++ G E +GIVE++G V + GD+
Sbjct: 32 PKAHEVRIQIIATSLCHTDATVIDSKFEGLA-FPVIVGHEAAGIVESIGPGVTNVKPGDK 90
Query: 126 VM 127
V+
Sbjct: 91 VI 92
Score = 29.6 bits (65), Expect = 5.3
Identities = 31/119 (26%), Positives = 42/119 (35%), Gaps = 6/119 (5%)
Query: 148 KIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNV 207
KI DD + F T Y A + G + V GGVG + C
Sbjct: 165 KIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGL-GGVGLSAVMGCKAAGAS 223
Query: 208 TVFG---TASTFKHEAIKDSVTHLFDRNADY-VQEV-KRISAEGVDIVLDCLCGDNTGK 261
+ G + F + L R+ +QEV ++ GVD LDC G T K
Sbjct: 224 RIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMK 282
>gi|189491778 nephrocystin 1 isoform 4 [Homo sapiens]
Length = 614
Score = 33.1 bits (74), Expect = 0.48
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
Query: 345 KKIKPVVDSLWALEEVKEAMQ---RIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEE 401
+++K VDSL + ++KEA++ R H +G + E+ ++S ++ ++G E
Sbjct: 18 QELKQQVDSLLSESQLKEALEPNKRQHIYQRVGAPTEEEEE-------SESEDSEDSGGE 70
Query: 402 EEDHEGDSENKE 413
EED E + E KE
Sbjct: 71 EEDAEEEEEEKE 82
>gi|156523966 class V alcohol dehydrogenase isoform 1 [Homo sapiens]
Length = 375
Score = 32.7 bits (73), Expect = 0.63
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 66 PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDR 125
P+ E++I+V A GL ++ V G+ P + G E +GIVE++G+ V + GD+
Sbjct: 32 PKAKEVRIKVVATGLCGTEMKVL-GSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDK 90
Query: 126 VM 127
V+
Sbjct: 91 VI 92
>gi|4501939 class V alcohol dehydrogenase isoform 2 [Homo sapiens]
Length = 368
Score = 32.7 bits (73), Expect = 0.63
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 66 PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDR 125
P+ E++I+V A GL ++ V G+ P + G E +GIVE++G+ V + GD+
Sbjct: 32 PKAKEVRIKVVATGLCGTEMKVL-GSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDK 90
Query: 126 VM 127
V+
Sbjct: 91 VI 92
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 32.0 bits (71), Expect = 1.1
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 297 QVEKVNPIKLYEENKVIA---------GFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKI 347
Q EK +L +E K++ + L LL QG + + K +Y KK
Sbjct: 392 QKEKERKERLKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKKR 451
Query: 348 KPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEG 407
K + L + +EV E+M+ + + + + E+TP P+ + +T +AG ++ +
Sbjct: 452 KKIPQQLES-KEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGLDDWEAMA 510
Query: 408 DSENKERM 415
E E++
Sbjct: 511 SDEETEKV 518
>gi|79749430 FRAS1-related extracellular matrix protein 2 precursor
[Homo sapiens]
Length = 3169
Score = 32.0 bits (71), Expect = 1.1
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Query: 114 GDSVKGYEIGDRVMAFVNYNAWAEVVCTPVE--FVYKIPDDMSFSEAAAFPMNFVTAY-- 169
G ++ + + D +NY PVE FV++ D ++FSE FP+ +
Sbjct: 1130 GIAISAFNLKDLRQGHINYVQSVHKGVEPVEDRFVFRCSDGINFSERQFFPIVIIPTNDE 1189
Query: 170 --VMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSV 225
M + EGMS+++ + A L +T F T ++ I +V
Sbjct: 1190 QPEMFMREFMVMEGMSLVIDTPILNAADADVPLDDLTFTITQFPTHGHIMNQLINGTV 1247
>gi|71565154 class III alcohol dehydrogenase, chi subunit [Homo
sapiens]
Length = 374
Score = 31.2 bits (69), Expect = 1.8
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 66 PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDR 125
P+ E++I++ A + D G D P++ G E +GIVE++G+ V + GD
Sbjct: 30 PKAHEVRIKIIATAVCHTDAYTLSG-ADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDT 88
Query: 126 VM 127
V+
Sbjct: 89 VI 90
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 30.8 bits (68), Expect = 2.4
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 361 KEAMQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKE 413
K + IH RG+ +L D K + ET + G++EED EG E+K+
Sbjct: 1650 KLELSLIHSRGDSSELRPDDTKAEE----KEPIETQQNGDKEEDDEGKKEDKK 1698
>gi|28274705 family with sequence similarity 9, member A [Homo
sapiens]
Length = 332
Score = 30.4 bits (67), Expect = 3.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 3 KEGVEKAEETEQMIEKEAGKEPAEGGGGDGSHRLGDAQE 41
KE E+ EE E+ E+E G E E GGG G + +E
Sbjct: 227 KEEEEEKEEEEEEGEEEGGGEEGEEGGGGGEGEETEEEE 265
Score = 29.6 bits (65), Expect = 5.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 3 KEGVEKAEETEQMIEKEAGKEPAEGGGGDGSHRLGDAQE 41
+E EK EE E+ E+ G+E EGGGG + +E
Sbjct: 228 EEEEEKEEEEEEGEEEGGGEEGEEGGGGGEGEETEEEEE 266
>gi|10864057 protamine 3 [Homo sapiens]
Length = 103
Score = 30.0 bits (66), Expect = 4.1
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 388 MANDSTETSEAGEEEEDH--EGDSENKERMP 416
++ D+ S AGEEEE+ EG+ E KE +P
Sbjct: 39 VSQDNFSLSSAGEEEEEEEEEGEEEEKEELP 69
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,918,120
Number of Sequences: 37866
Number of extensions: 710287
Number of successful extensions: 3361
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3300
Number of HSP's gapped (non-prelim): 60
length of query: 419
length of database: 18,247,518
effective HSP length: 105
effective length of query: 314
effective length of database: 14,271,588
effective search space: 4481278632
effective search space used: 4481278632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.