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Search of human proteins with 239757944
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757944 PREDICTED: hypothetical protein [Homo sapiens]
(600 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757944 PREDICTED: hypothetical protein [Homo sapiens] 1269 0.0
gi|239752455 PREDICTED: hypothetical protein XP_002348281 [Homo ... 49 1e-05
gi|40288197 GATA binding protein 6 [Homo sapiens] 43 7e-04
gi|57864582 hornerin [Homo sapiens] 43 0.001
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 41 0.004
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 41 0.004
gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H... 40 0.008
gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H... 40 0.008
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 37 0.068
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 37 0.068
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 36 0.089
gi|239756839 PREDICTED: hypothetical protein [Homo sapiens] 35 0.20
gi|50843837 hypothetical protein LOC55701 [Homo sapiens] 35 0.20
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 35 0.26
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 35 0.26
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s... 35 0.26
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s... 35 0.26
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 34 0.34
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 34 0.34
gi|126352608 elastin isoform e precursor [Homo sapiens] 34 0.44
gi|126352446 elastin isoform d precursor [Homo sapiens] 34 0.44
gi|126352322 elastin isoform c precursor [Homo sapiens] 34 0.44
gi|126352700 elastin isoform b precursor [Homo sapiens] 34 0.44
gi|126352440 elastin isoform a precursor [Homo sapiens] 34 0.44
gi|169169912 PREDICTED: hypothetical protein [Homo sapiens] 34 0.44
gi|169179759 PREDICTED: hypothetical protein [Homo sapiens] 34 0.44
gi|239749005 PREDICTED: hypothetical protein [Homo sapiens] 34 0.44
gi|169180158 PREDICTED: hypothetical protein [Homo sapiens] 34 0.44
gi|239743025 PREDICTED: hypothetical protein [Homo sapiens] 34 0.44
gi|119508426 alpha 3 type IX collagen [Homo sapiens] 34 0.44
>gi|239757944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 600
Score = 1269 bits (3283), Expect = 0.0
Identities = 600/600 (100%), Positives = 600/600 (100%)
Query: 1 MGEEGGREAGGVHAPGSGHAAQRAQWWWAAYLALLLAGVVARQQALDVQAVAVLLITPQP 60
MGEEGGREAGGVHAPGSGHAAQRAQWWWAAYLALLLAGVVARQQALDVQAVAVLLITPQP
Sbjct: 1 MGEEGGREAGGVHAPGSGHAAQRAQWWWAAYLALLLAGVVARQQALDVQAVAVLLITPQP 60
Query: 61 LVQLACPPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGS 120
LVQLACPPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGS
Sbjct: 61 LVQLACPPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGS 120
Query: 121 SQFPFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPE 180
SQFPFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPE
Sbjct: 121 SQFPFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPE 180
Query: 181 LQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAG 240
LQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAG
Sbjct: 181 LQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAG 240
Query: 241 HVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADG 300
HVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADG
Sbjct: 241 HVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADG 300
Query: 301 QGWHPCRQLARQASGHKQEVPAGQGHHQPHRCHSRGIGSHKLPVTRVLSLVQHLGHIPKA 360
QGWHPCRQLARQASGHKQEVPAGQGHHQPHRCHSRGIGSHKLPVTRVLSLVQHLGHIPKA
Sbjct: 301 QGWHPCRQLARQASGHKQEVPAGQGHHQPHRCHSRGIGSHKLPVTRVLSLVQHLGHIPKA 360
Query: 361 PCLTHALPHLPAGHQLLGAAAHQQQLVGIVSELGLWALGWVTEGHAVRAVDYRASDSHGL 420
PCLTHALPHLPAGHQLLGAAAHQQQLVGIVSELGLWALGWVTEGHAVRAVDYRASDSHGL
Sbjct: 361 PCLTHALPHLPAGHQLLGAAAHQQQLVGIVSELGLWALGWVTEGHAVRAVDYRASDSHGL 420
Query: 421 ELQLGAELEEAVHCADIECASARCQCQVVESGIRCGEAMGPCQGQWRWGQQQQEEAEAEG 480
ELQLGAELEEAVHCADIECASARCQCQVVESGIRCGEAMGPCQGQWRWGQQQQEEAEAEG
Sbjct: 421 ELQLGAELEEAVHCADIECASARCQCQVVESGIRCGEAMGPCQGQWRWGQQQQEEAEAEG 480
Query: 481 RPASHHGGLKWCSRGVSWAAWHIRSVQLPQGSGDGHEMAAGGHSLAYLVGHRRGPSSSWR 540
RPASHHGGLKWCSRGVSWAAWHIRSVQLPQGSGDGHEMAAGGHSLAYLVGHRRGPSSSWR
Sbjct: 481 RPASHHGGLKWCSRGVSWAAWHIRSVQLPQGSGDGHEMAAGGHSLAYLVGHRRGPSSSWR 540
Query: 541 CQEHVSQSPSLPPHNAIVPSPTHPNKPGQAAQPLSARPFAQWHRAGCCCPLLAAAGMMEY 600
CQEHVSQSPSLPPHNAIVPSPTHPNKPGQAAQPLSARPFAQWHRAGCCCPLLAAAGMMEY
Sbjct: 541 CQEHVSQSPSLPPHNAIVPSPTHPNKPGQAAQPLSARPFAQWHRAGCCCPLLAAAGMMEY 600
>gi|239752455 PREDICTED: hypothetical protein XP_002348281 [Homo
sapiens]
Length = 241
Score = 48.9 bits (115), Expect = 1e-05
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 296 QLADGQGWHPCRQLARQASGHKQEV-PAGQGHHQPHRCHSRGI-GSHKLPVTRVLSLVQH 353
+LA QG R LA +S HKQ P H+ H G+ G ++ + V+ L Q
Sbjct: 40 ELAGAQGGEVLR-LAVDSSAHKQLAGPLALLHNDTS--HGVGLLGPRQVVLLAVVRLTQ- 95
Query: 354 LGHIPKAPCLTHALPHLPAGHQLLGAAAHQQQLVGIVSELGLWALGWVTEGHA----VRA 409
L + + L ALP AGHQ G ++QQLV +V G A+G T HA +
Sbjct: 96 LEEVVQTQELADALPDAAAGHQAAGRIVYEQQLVDVVH--GGQAVG--THAHAGGRVAAS 151
Query: 410 VDYRASDSHGLEL-QLGAELEEAVHCADIECASARCQCQVVESG 452
V G +L Q+G +L+++VHCA S QV +G
Sbjct: 152 VVLDGPRDMGPQLSQVGGQLKDSVHCAHEHLPSHPVHSQVGTAG 195
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 43.1 bits (100), Expect = 7e-04
Identities = 61/255 (23%), Positives = 86/255 (33%), Gaps = 26/255 (10%)
Query: 57 TPQPLVQLAC-PPA--LALPGFQGLPCGAPAGGQLCGVLDPG--WGCWDEESTGRVVSEK 111
TPQ + A PPA L L + P GAP G GV PG W++ + +
Sbjct: 62 TPQLDTEAAAGPPARSLLLSSYASHPFGAPHGPSAPGVAGPGGNLSSWEDLLLFTDLDQA 121
Query: 112 GGANQI----DGSSQFPFLPGHRGRTHH----FPHSAPSGLGHSPGN--HDTGAAAAPWE 161
A+++ G+ PF P + P+ +PG H AAAA
Sbjct: 122 ATASKLLWSSRGAKLSPFAPEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAAA 181
Query: 162 GYHVPICLESCHGADRLPELQQRLDLQGLAASNGAGGVLVATG----------QGARGKE 211
P+ + + LP L L G +N AGG G G+ G
Sbjct: 182 AASSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAGGAGAHPGWPQASADSPPYGSGGGA 241
Query: 212 GGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPGPAAAEHEVGGAGVGKGPDVA 271
G A G G V P + + + + PG AA G GV G
Sbjct: 242 AG-GGAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGGYAAAGSGGAGGVSGGGSSL 300
Query: 272 VVVVGEVAHHQAAQA 286
+ G + + A
Sbjct: 301 AAMGGREPQYSSLSA 315
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 42.7 bits (99), Expect = 0.001
Identities = 103/459 (22%), Positives = 151/459 (32%), Gaps = 59/459 (12%)
Query: 105 GRVVSEKGGANQIDGSS-QFPFLPGHRGRTHHFPHSAP--SGLGHSPGNHDTGAAAAPWE 161
G + + Q D SS Q H +HH SG G SPG+ G+ +
Sbjct: 845 GSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSP 904
Query: 162 GYHVPICLESCHGADRLPELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALA 221
Y HG+ G S+G G ++GQ + + G + +
Sbjct: 905 SY-------GRHGSGSGRSSSSGRHGSGSGQSSGFGHKS-SSGQSSGYTQHGSGSGHSSS 956
Query: 222 GEGDLHVGVQVGVPQADAGHVGAVLSLGPGPAAAEHEVG----GAGVGKGPDVAVVVVGE 277
E Q + G+ S G + + +G G+G G+ P +
Sbjct: 957 YEQHGSRSGQSSRSEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSR----- 1011
Query: 278 VAHHQAAQALAGEGLRPGQLADGQGWHPCRQLARQASGHKQEVPAGQGHHQPHRCHSRGI 337
H + +G+ G G GW R SGH +G GH + S G
Sbjct: 1012 -GRHGSG---SGQSSSYGPYRSGSGWSSSRGPYESGSGHS----SGLGHRESRSGQSSGY 1063
Query: 338 GSHKLPVTRVLSLVQHLGHIPKAP-CLTHALPHLPAGHQLLGAAAHQQQLVGIVSELGLW 396
G H + QH ++ C H G +++H Q G G
Sbjct: 1064 GQHGSSSGHSSTHGQHGSTSGQSSSCGQH-------GASSGQSSSHGQHGSGSSQSSGYG 1116
Query: 397 ALG---WVTEGHAVRAVDYRASDSHGLEL----------QLGAELEEAVHCADIECASAR 443
G + GH R R S S+G Q G+ L E+ E +S +
Sbjct: 1117 RQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQ 1176
Query: 444 CQCQVVESGIRCGEAMGPCQGQWRWGQQQQEEAEAEGRPASHHGGLKWCSRGVSWAAWHI 503
+ G G + G Q R GQ + E +S H G G ++ H
Sbjct: 1177 SS-SYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQH--GSGSRQSSGHG 1233
Query: 504 RSVQLPQGSGDGHEMAAGGH--SLAYLVGHRRGPSSSWR 540
R QGSG GH + G H L + H + S S R
Sbjct: 1234 R-----QGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGR 1267
Score = 39.7 bits (91), Expect = 0.008
Identities = 106/445 (23%), Positives = 148/445 (33%), Gaps = 91/445 (20%)
Query: 116 QIDGSSQFPFLPGHRGRTHHFP----HSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLES 171
Q GS Q P H + H H + SG S G H +G+ + G+H +S
Sbjct: 1822 QGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQS 1881
Query: 172 C----HGADRLPELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLH 227
HG+ G ++S G +GQ +RG++ G + G
Sbjct: 1882 SGYTQHGSG-----------SGHSSSYEQHGS--RSGQSSRGEQHG-------SSSGSSS 1921
Query: 228 VGVQVGVPQADAGHVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQAL 287
Q G G+ SLG G +H G+G G+ P + H +
Sbjct: 1922 SYGQHGS--------GSRQSLGHG----QH---GSGSGQSPSPSR------GRHGSG--- 1957
Query: 288 AGEGLRPGQLADGQGWHPCRQLARQASGHKQEVPAGQGHHQPHRCHSRGIGSHKLPVTRV 347
+G+ G G GW R SGH +G GH + S G G H
Sbjct: 1958 SGQSSSYGPYGSGSGWSSSRGPYESGSGHS----SGLGHRESRSGQSSGYGQHGSSSGHS 2013
Query: 348 LSLVQH-LGHIPKAPCLTHALPHLPAGHQLLGAAAHQQQLVGIVSELGLWALG---WVTE 403
+ QH + C H G +++H Q G G G +
Sbjct: 2014 STHGQHGSASGQSSSCGQH-------GASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSP 2066
Query: 404 GHAVRAVDYRASDSHGLEL----------QLGAELEEAVHCADIECASARCQCQVVESGI 453
GH R R S S+G Q G L E+ E +S + + G
Sbjct: 2067 GHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSS-SYSQHGS 2125
Query: 454 RCGEAMGPCQGQWRWGQQQQEEAEAEGRPASHHGGLKWCSRGVSWAAWHIRSVQLPQGSG 513
G + G Q R GQ + E +S G G ++ H R QGSG
Sbjct: 2126 GSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQH--GSGSRQSSGHGR-----QGSG 2178
Query: 514 DGHEMAAGGHSLAYLVGHRRGPSSS 538
GH + G H G G SSS
Sbjct: 2179 SGHSPSRGRH------GSGSGHSSS 2197
Score = 37.7 bits (86), Expect = 0.030
Identities = 107/453 (23%), Positives = 150/453 (33%), Gaps = 88/453 (19%)
Query: 116 QIDGSSQFPFLPGHRGRTHHFP----HSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLES 171
Q GS Q P H + H H + SG S G H +G+ + G+H +S
Sbjct: 2292 QGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQS 2351
Query: 172 C----HGADRLPELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLH 227
HG+ G ++S G +GQ +RG+ G + G
Sbjct: 2352 SGYTQHGSG-----------SGHSSSYEQHGS--RSGQSSRGERHG-------SSSGSSS 2391
Query: 228 VGVQVGVPQADAGHVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQAL 287
Q G G+ SLG G +H G+G G+ P + H +
Sbjct: 2392 SYGQHGS--------GSRQSLGHG----QH---GSGSGQSPSPSR------GRHGSG--- 2427
Query: 288 AGEGLRPGQLADGQGWHPCRQLARQASGHKQEVPAGQGHHQPHRCHSRGIGSHKLPVTRV 347
+G+ G GW R SGH +G GH + S G G H
Sbjct: 2428 SGQSSSYSPYGSGSGWSSSRGPYESGSGHS----SGLGHRESRSGQSSGYGQHGSSSGHS 2483
Query: 348 LSLVQHLGHIPKAP-CLTHALPHLPAGHQLLGAAAHQQQLVGIVSELGLWALG---WVTE 403
+ QH ++ C H G +++H Q G G G +
Sbjct: 2484 STHGQHGSTSGQSSSCGQH-------GASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSP 2536
Query: 404 GHAVRAVDYRASDSHGLEL----------QLGAELEEAVHCADIECASARCQCQVVESGI 453
GH R R S S+G Q G+ L E+ E +S + + G
Sbjct: 2537 GHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSS-SYSQHGS 2595
Query: 454 RCGEAMGPCQGQWRWGQQQQEEAEAEGRPASHHGGLKWCSRGVSWAAWHIR----SVQLP 509
G + G Q R GQ + E +S H G G ++ H R S Q P
Sbjct: 2596 GSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQH--GSGSRQSSGHGRQGSGSGQSP 2653
Query: 510 Q----GSGDGHEMAAGGHSLAYLVGHRRGPSSS 538
GSG GH + G H RGP S
Sbjct: 2654 SRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYES 2686
Score = 34.3 bits (77), Expect = 0.34
Identities = 61/268 (22%), Positives = 83/268 (30%), Gaps = 52/268 (19%)
Query: 76 QGLPCG--APAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRGRT 133
Q CG + GQ G G GR + G+ Q G Q G R
Sbjct: 1085 QSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGR---QGSGSGQSPGHGQRG--SGSRQSP 1139
Query: 134 HHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLAAS 193
+ H + SG S G H +G + G+H ES G G S
Sbjct: 1140 SYGRHGSGSGRSSSSGQHGSGLGESSGFGHH-----ESSSGQSS----SYSQHGSGSGHS 1190
Query: 194 NGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPGPA 253
+G G +GQ +RG+ G H G + +GH G P+
Sbjct: 1191 SGYGQHGSRSGQSSRGERHGSSSG------SSSHYGQHGSGSRQSSGHGRQGSGSGHSPS 1244
Query: 254 AAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGWHPCRQLARQA 313
H G+G+G H ++ GQ G G R
Sbjct: 1245 RGRH---GSGLG---------------HSSSH---------GQHGSGSGRSSSRGPYESR 1277
Query: 314 SGHKQ---EVPAGQGHHQPHRCHSRGIG 338
SGH + +G GH + H G G
Sbjct: 1278 SGHSSVFGQHESGSGHSSAYSQHGSGSG 1305
Score = 32.3 bits (72), Expect = 1.3
Identities = 60/268 (22%), Positives = 82/268 (30%), Gaps = 52/268 (19%)
Query: 76 QGLPCG--APAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRGRT 133
Q CG + GQ G G GR + G+ Q G Q G R
Sbjct: 2495 QSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGR---QGSGSGQSPGHGQRG--SGSRQSP 2549
Query: 134 HHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLAAS 193
+ H + SG S G H +G + G+H ES G G S
Sbjct: 2550 SYGRHGSGSGRSSSSGQHGSGLGESSGFGHH-----ESSSGQSS----SYSQHGSGSGHS 2600
Query: 194 NGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPGPA 253
+G G +GQ +RG+ G H G + +GH G P+
Sbjct: 2601 SGYGQHGSRSGQSSRGERHGSSSG------SSSHYGQHGSGSRQSSGHGRQGSGSGQSPS 2654
Query: 254 AAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGWHPCRQLARQA 313
H G+G+G H ++ GQ G G R
Sbjct: 2655 RGRH---GSGLG---------------HSSSH---------GQHGSGSGRSSSRGPYESR 2687
Query: 314 SGHKQ---EVPAGQGHHQPHRCHSRGIG 338
GH + +G GH + H G G
Sbjct: 2688 LGHSSVFGQHESGSGHSSAYSQHGSGSG 2715
Score = 32.0 bits (71), Expect = 1.7
Identities = 60/268 (22%), Positives = 83/268 (30%), Gaps = 52/268 (19%)
Query: 76 QGLPCG--APAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRGRT 133
Q CG + GQ G G GR + G+ Q G Q G R
Sbjct: 1555 QSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGR---QGSGSGQSPGHGQRG--SGSRQSP 1609
Query: 134 HHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLAAS 193
+ H + SG S G H +G + G+H ES G G S
Sbjct: 1610 SYGRHGSGSGRSSSSGQHGSGLGESSGFGHH-----ESSSGQSS----SYSQHGSGSGHS 1660
Query: 194 NGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPGPA 253
+G G +GQ +RG+ G + G + +GH G P+
Sbjct: 1661 SGYGQHGSRSGQSSRGERHG------SSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPS 1714
Query: 254 AAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGWHPCRQLARQA 313
H G+G+G H ++ GQ G G R
Sbjct: 1715 RGRH---GSGLG---------------HSSSH---------GQHGSGSGRSSSRGPYESR 1747
Query: 314 SGHKQ---EVPAGQGHHQPHRCHSRGIG 338
SGH + +G GH + H G G
Sbjct: 1748 SGHSSVFGQHESGSGHSSAYSQHGSGSG 1775
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 40.8 bits (94), Expect = 0.004
Identities = 50/161 (31%), Positives = 65/161 (40%), Gaps = 19/161 (11%)
Query: 179 PELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLH-VGVQVGVPQA 237
P LQ+ L Q A G ++ +GQ G GG D G G L V +G+
Sbjct: 68 PRLQRALGGQAWAGRRQLHGFMLYSGQQRDGHRGGHDVG-GRGGGGRLQLVAGALGLGAG 126
Query: 238 DAGHVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQL 297
H G L + G A EHEVG A + + G V H + LAG P ++
Sbjct: 127 VLDHSG--LRVAVGRAHLEHEVGAA---LHDVLDLQEAGRVHDH---ELLAGRHGEPARV 178
Query: 298 ADGQ------GWHPCRQL---ARQASGHKQEVPAGQGHHQP 329
A+GQ G H QL A+ EV A G H+P
Sbjct: 179 AEGQDLLEAGGRHGAGQLEGALAVAAEQVAEVEAAGGQHRP 219
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 40.8 bits (94), Expect = 0.004
Identities = 50/161 (31%), Positives = 65/161 (40%), Gaps = 19/161 (11%)
Query: 179 PELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLH-VGVQVGVPQA 237
P LQ+ L Q A G ++ +GQ G GG D G G L V +G+
Sbjct: 68 PRLQRALGGQAWAGRRQLHGFMLYSGQQRDGHRGGHDVG-GRGGGGRLQLVAGALGLGAG 126
Query: 238 DAGHVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQL 297
H G L + G A EHEVG A + + G V H + LAG P ++
Sbjct: 127 VLDHSG--LRVAVGRAHLEHEVGAA---LHDVLDLQEAGRVHDH---ELLAGRHGEPARV 178
Query: 298 ADGQ------GWHPCRQL---ARQASGHKQEVPAGQGHHQP 329
A+GQ G H QL A+ EV A G H+P
Sbjct: 179 AEGQDLLEAGGRHGAGQLEGALAVAAEQVAEVEAAGGQHRP 219
>gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform b [Homo sapiens]
Length = 2347
Score = 39.7 bits (91), Expect = 0.008
Identities = 45/152 (29%), Positives = 58/152 (38%), Gaps = 14/152 (9%)
Query: 129 HRGRTHHFPHSAPSGLGHSPGNHDT-----GAAAAPWEGYHVPICLESCHG---ADRLPE 180
H +HF H +P G PG DT GA +P P ES H AD E
Sbjct: 524 HHHHHYHFSHGSPRRPGPEPGACDTRLVRAGAPPSPPSPGRGPPDAESVHSIYHADCHIE 583
Query: 181 LQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQ---VGVPQA 237
Q AA+ A + +ATG G L + +G+G G + G P
Sbjct: 584 GPQERARVAHAAATAAASLRLATGLGTMNYPTILPSGVG-SGKGSTSPGPKGKWAGGPPG 642
Query: 238 DAGHVGAVLSLGPGP-AAAEHEVGGAGVGKGP 268
GH G + P P H VG G+G+ P
Sbjct: 643 TGGH-GPLSLNSPDPYEKIPHVVGEHGLGQAP 673
>gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform a [Homo sapiens]
Length = 2353
Score = 39.7 bits (91), Expect = 0.008
Identities = 45/152 (29%), Positives = 58/152 (38%), Gaps = 14/152 (9%)
Query: 129 HRGRTHHFPHSAPSGLGHSPGNHDT-----GAAAAPWEGYHVPICLESCHG---ADRLPE 180
H +HF H +P G PG DT GA +P P ES H AD E
Sbjct: 524 HHHHHYHFSHGSPRRPGPEPGACDTRLVRAGAPPSPPSPGRGPPDAESVHSIYHADCHIE 583
Query: 181 LQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQ---VGVPQA 237
Q AA+ A + +ATG G L + +G+G G + G P
Sbjct: 584 GPQERARVAHAAATAAASLRLATGLGTMNYPTILPSGVG-SGKGSTSPGPKGKWAGGPPG 642
Query: 238 DAGHVGAVLSLGPGP-AAAEHEVGGAGVGKGP 268
GH G + P P H VG G+G+ P
Sbjct: 643 TGGH-GPLSLNSPDPYEKIPHVVGEHGLGQAP 673
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 36.6 bits (83), Expect = 0.068
Identities = 97/370 (26%), Positives = 118/370 (31%), Gaps = 92/370 (24%)
Query: 62 VQLACPPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVV--SEKGGANQIDG 119
V + CP A GAP G L + G GR +E A + G
Sbjct: 665 VAVVCPQVAA---------GAPVGADLDVSVVLWVGVVGHLGRGRGAGRAEAARAAREGG 715
Query: 120 SSQFPFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHV-PICLESCHGADRL 178
Q F+ RG GLGH P W G V P+ S R+
Sbjct: 716 PHQGVFIQRGRG-----------GLGHRP--------LPGWRGQGVGPLAQPSVQVLGRV 756
Query: 179 PELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGV----QVGV 234
P G VA G L A A++G G L G+ V
Sbjct: 757 PR------------DPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGLGRVASVAA 804
Query: 235 PQADAGHVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVV--------------VGEVAH 280
A GAVL G A GG GP VV VG A
Sbjct: 805 EGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAV 864
Query: 281 HQAAQALAGEGLRPGQLADGQGW-------HPCRQ----LARQASGHKQEVPAGQGH-HQ 328
A + AG G ++ G G PCRQ A+ Q V A QG H+
Sbjct: 865 AAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHR 924
Query: 329 P---------HRCHSRGIGSHKLPVTRVLSLVQHLGHIPKAPCLTHALPHLPAGHQLLGA 379
P HR +RG S + R + H +A AL G Q +GA
Sbjct: 925 PGAQGAPSHRHRPGARGRRSRR----RAAVALAGGAHPARA-----ALGRRRGGGQAVGA 975
Query: 380 -AAHQQQLVG 388
AAHQ +L G
Sbjct: 976 RAAHQARLAG 985
Score = 32.0 bits (71), Expect = 1.7
Identities = 77/287 (26%), Positives = 100/287 (34%), Gaps = 54/287 (18%)
Query: 71 ALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHR 130
AL G GL APA + C G GCW R GG Q GH
Sbjct: 583 ALGGRAGL-VAAPARRE-CPARRRG-GCWPRRPRRRHGGGGGGGGP---GLQDLLGGGHA 636
Query: 131 GRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGL 190
G H AP+ + G G+ +C + GA +L + L
Sbjct: 637 GGAHGHVVVAPAAAAPTAREGRAGR-----HGHVAVVCPQVAAGAPVGADLDVSVVLW-- 689
Query: 191 AASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGH--VGAVLSL 248
+ G RG+ G EA A EG H GV + + GH +
Sbjct: 690 ---------VGVVGHLGRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLGHRPLPGWRGQ 740
Query: 249 GPGPAA-----------AEHEVGGAGVGKGPDVAVVVVGEV-AHHQAAQALAGEGLRPGQ 296
G GP A + VG A V +GP V G V AA A++G G+
Sbjct: 741 GVGPLAQPSVQVLGRVPRDPAVGAATVAQGP-----VHGHVPVELTAAAAVSGR----GR 791
Query: 297 LADGQGWHPCRQLARQASGHKQEVPAG----QGHHQPHRCHSRGIGS 339
L DG G ++A A+ Q AG QGH +RG G+
Sbjct: 792 LRDGLG-----RVASVAAEGAQVAWAGAVLVQGHEAGVAGGARGGGA 833
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 36.6 bits (83), Expect = 0.068
Identities = 97/370 (26%), Positives = 118/370 (31%), Gaps = 92/370 (24%)
Query: 62 VQLACPPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVV--SEKGGANQIDG 119
V + CP A GAP G L + G GR +E A + G
Sbjct: 665 VAVVCPQVAA---------GAPVGADLDVSVVLWVGVVGHLGRGRGAGRAEAARAAREGG 715
Query: 120 SSQFPFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHV-PICLESCHGADRL 178
Q F+ RG GLGH P W G V P+ S R+
Sbjct: 716 PHQGVFIQRGRG-----------GLGHRP--------LPGWRGQGVGPLAQPSVQVLGRV 756
Query: 179 PELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGV----QVGV 234
P G VA G L A A++G G L G+ V
Sbjct: 757 PR------------DPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGLGRVASVAA 804
Query: 235 PQADAGHVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVV--------------VGEVAH 280
A GAVL G A GG GP VV VG A
Sbjct: 805 EGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAV 864
Query: 281 HQAAQALAGEGLRPGQLADGQGW-------HPCRQ----LARQASGHKQEVPAGQGH-HQ 328
A + AG G ++ G G PCRQ A+ Q V A QG H+
Sbjct: 865 AAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHR 924
Query: 329 P---------HRCHSRGIGSHKLPVTRVLSLVQHLGHIPKAPCLTHALPHLPAGHQLLGA 379
P HR +RG S + R + H +A AL G Q +GA
Sbjct: 925 PGAQGAPSHRHRPGARGRRSRR----RAAVALAGGAHPARA-----ALGRRRGGGQAVGA 975
Query: 380 -AAHQQQLVG 388
AAHQ +L G
Sbjct: 976 RAAHQARLAG 985
Score = 32.0 bits (71), Expect = 1.7
Identities = 77/287 (26%), Positives = 100/287 (34%), Gaps = 54/287 (18%)
Query: 71 ALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHR 130
AL G GL APA + C G GCW R GG Q GH
Sbjct: 583 ALGGRAGL-VAAPARRE-CPARRRG-GCWPRRPRRRHGGGGGGGGP---GLQDLLGGGHA 636
Query: 131 GRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGL 190
G H AP+ + G G+ +C + GA +L + L
Sbjct: 637 GGAHGHVVVAPAAAAPTAREGRAGR-----HGHVAVVCPQVAAGAPVGADLDVSVVLW-- 689
Query: 191 AASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGH--VGAVLSL 248
+ G RG+ G EA A EG H GV + + GH +
Sbjct: 690 ---------VGVVGHLGRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLGHRPLPGWRGQ 740
Query: 249 GPGPAA-----------AEHEVGGAGVGKGPDVAVVVVGEV-AHHQAAQALAGEGLRPGQ 296
G GP A + VG A V +GP V G V AA A++G G+
Sbjct: 741 GVGPLAQPSVQVLGRVPRDPAVGAATVAQGP-----VHGHVPVELTAAAAVSGR----GR 791
Query: 297 LADGQGWHPCRQLARQASGHKQEVPAG----QGHHQPHRCHSRGIGS 339
L DG G ++A A+ Q AG QGH +RG G+
Sbjct: 792 LRDGLG-----RVASVAAEGAQVAWAGAVLVQGHEAGVAGGARGGGA 833
>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
Length = 330
Score = 36.2 bits (82), Expect = 0.089
Identities = 38/112 (33%), Positives = 46/112 (41%), Gaps = 19/112 (16%)
Query: 189 GLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSL 248
G AA+ GAGG A G G G GG G G +G P + +V L+
Sbjct: 61 GSAAATGAGGA-GAYGTGGPGGPGG-----PAGGGGACSMG-----PLTGSYNVNMALAG 109
Query: 249 GPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADG 300
GPGP GG+ G G A V+ AH + LAG P LA G
Sbjct: 110 GPGPGGG----GGSSGGAGALSAAGVIRVPAH----RPLAGAVAHPQPLATG 153
>gi|239756839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 743
Score = 35.0 bits (79), Expect = 0.20
Identities = 59/221 (26%), Positives = 71/221 (32%), Gaps = 37/221 (16%)
Query: 73 PGFQGLPCGAPAGGQLC---------GVLDPG--WGCWDEESTGRVVSEKGGANQIDGSS 121
P FQ PC P QL LDP + C +ST ++ +D
Sbjct: 467 PNFQEAPCSKPQLTQLLTGLVVEAHRAPLDPSIPYLCRHGDSTTSLIISYALVTIMD--- 523
Query: 122 QFPFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPEL 181
FP G TH HS G G A +G P HG R P++
Sbjct: 524 -FPIPQGLALTTHPGWHS-------EAGGRRDGGAGQVVQGLRGP------HGR-RGPQV 568
Query: 182 QQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAG- 240
Q AA+ G G L QGA G L A+ G H V VG G
Sbjct: 569 QAGWQAGRQAAALGRGAALRRAAQGAGSASGLLGGAVGARGRRRAHKPVVVGERLRGRGA 628
Query: 241 -------HVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVV 274
G V G +V GA G P V V+
Sbjct: 629 RVRTWRRGGGRVAQRGQLAHVLRRQVEGAAAGLTPHVPPVL 669
>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
Length = 1519
Score = 35.0 bits (79), Expect = 0.20
Identities = 76/325 (23%), Positives = 116/325 (35%), Gaps = 53/325 (16%)
Query: 43 QQALDVQAVAVLLITPQPLVQLACPPALALPGFQGLPCGAPAGGQLCGVLDPGWGC---- 98
Q + + A+ L+ P P A P L C AP GG++ V P C
Sbjct: 87 QVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRL-ALKCLAPGGGRVQEVPVPNEACAYLF 145
Query: 99 ---W-----DEESTGRV----VSEKGGANQIDGSSQF--------PFLPGHRGRT--HHF 136
W + TGR+ +S G ++ + + GH+ T
Sbjct: 146 TPEWLQGINKDRPTGRLSTCLLSAPSGIQRLPWAELICPRFVHKEGLMVGHQPSTLPPEL 205
Query: 137 PHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLAA-SNG 195
P S P GL P + +P +G++ P+ E G + + L+ L ++G + G
Sbjct: 206 P-SGPPGLPSPPLPEEALGTRSPGDGHNAPV--EGPEG-EYVELLEVTLPVRGSPTDAEG 261
Query: 196 AGGV----LVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPG 251
+ G+ V T +GA GK + +G G P + GA PG
Sbjct: 262 SPGLSRVRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRGQDGARPPGEGSSTGASPESPPG 321
Query: 252 PAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGWHPCRQLAR 311
A P+ AV+ V E +A LRPG+L G G Q A
Sbjct: 322 AEAV------------PEAAVLEVSEPPAEAVGEASGSCPLRPGELRGGGGG---GQGAE 366
Query: 312 QASGHKQEVPAGQGHHQPHRCHSRG 336
G + G+G+ + R RG
Sbjct: 367 GPPGTPRR--TGKGNRRKKRAAGRG 389
>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
sapiens]
Length = 1424
Score = 34.7 bits (78), Expect = 0.26
Identities = 61/219 (27%), Positives = 74/219 (33%), Gaps = 30/219 (13%)
Query: 67 PPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKG-------------- 112
P L LP L APA + C D G C+ + + G EKG
Sbjct: 9 PQVLLLPLLLVLLAAAPAASKGCVCKDKGQ-CFCDGAKGEK-GEKGFPGPPGSPGQKGFT 66
Query: 113 ---GANQIDGSSQFPFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICL 169
G G FP LPG G S G SPG T P+ VP C
Sbjct: 67 GPEGLPGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGLVGVPGCS 126
Query: 170 ESCHGADRLPELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVG 229
S G P L L G+ + G G +GA KE E + L +GD +
Sbjct: 127 GS-KGEQGFPGLPGTLGYPGIPGAAGLKG-----QKGAPAKE----EDIELDAKGDPGLP 176
Query: 230 VQVGVPQADAGHVGAVLSLGPGPAAAEHEVGGAGVGKGP 268
G PQ G G +GP GA +GP
Sbjct: 177 GAPG-PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGP 214
Score = 33.9 bits (76), Expect = 0.44
Identities = 37/135 (27%), Positives = 45/135 (33%), Gaps = 15/135 (11%)
Query: 64 LACPPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQF 123
L CP + PG G P A G+ + G G T E+G + + G
Sbjct: 720 LGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG------TPGFPGERGNSGE-HGEIGL 772
Query: 124 PFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQ 183
P LPG G + P G D G P E C+E GA LP L
Sbjct: 773 PGLPGLPGTPGNEGLDGPRG--------DPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNG 824
Query: 184 RLDLQGLAASNGAGG 198
QG G G
Sbjct: 825 LKGQQGRRGKTGPKG 839
Score = 30.4 bits (67), Expect = 4.9
Identities = 53/204 (25%), Positives = 69/204 (33%), Gaps = 28/204 (13%)
Query: 70 LALPGFQGLPCGAPAGGQLCGVL-DPGWGC--WDEESTGRVVSEKGGANQIDGSSQFPFL 126
+ LPG GLP G P L G DPG ++ GR + GA + G +
Sbjct: 770 IGLPGLPGLP-GTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQ 828
Query: 127 PGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAP-WEGYHVPICLESCHGADRLPELQQRL 185
G RG+T GL S +TG+ P +G P+ G
Sbjct: 829 QGRRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGN---------- 878
Query: 186 DLQGLAASNGAGGVLVATG----QGARGKEGGLDEALALAGEGDLHVGVQVGVPQA--DA 239
G+ G GV+ G G G G G V Q G P A +
Sbjct: 879 --PGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQ 936
Query: 240 GHVGAVLSLGPGPAAAEHEVGGAG 263
G G PGP+ H +G G
Sbjct: 937 GDKG-----NPGPSEISHVIGDKG 955
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 34.7 bits (78), Expect = 0.26
Identities = 61/219 (27%), Positives = 74/219 (33%), Gaps = 30/219 (13%)
Query: 67 PPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKG-------------- 112
P L LP L APA + C D G C+ + + G EKG
Sbjct: 9 PQVLLLPLLLVLLAAAPAASKGCVCKDKGQ-CFCDGAKGEK-GEKGFPGPPGSPGQKGFT 66
Query: 113 ---GANQIDGSSQFPFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICL 169
G G FP LPG G S G SPG T P+ VP C
Sbjct: 67 GPEGLPGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGLVGVPGCS 126
Query: 170 ESCHGADRLPELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVG 229
S G P L L G+ + G G +GA KE E + L +GD +
Sbjct: 127 GS-KGEQGFPGLPGTLGYPGIPGAAGLKG-----QKGAPAKE----EDIELDAKGDPGLP 176
Query: 230 VQVGVPQADAGHVGAVLSLGPGPAAAEHEVGGAGVGKGP 268
G PQ G G +GP GA +GP
Sbjct: 177 GAPG-PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGP 214
Score = 33.9 bits (76), Expect = 0.44
Identities = 37/135 (27%), Positives = 45/135 (33%), Gaps = 15/135 (11%)
Query: 64 LACPPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQF 123
L CP + PG G P A G+ + G G T E+G + + G
Sbjct: 720 LGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG------TPGFPGERGNSGE-HGEIGL 772
Query: 124 PFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQ 183
P LPG G + P G D G P E C+E GA LP L
Sbjct: 773 PGLPGLPGTPGNEGLDGPRG--------DPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNG 824
Query: 184 RLDLQGLAASNGAGG 198
QG G G
Sbjct: 825 LKGQQGRRGKTGPKG 839
Score = 30.4 bits (67), Expect = 4.9
Identities = 53/204 (25%), Positives = 69/204 (33%), Gaps = 28/204 (13%)
Query: 70 LALPGFQGLPCGAPAGGQLCGVL-DPGWGC--WDEESTGRVVSEKGGANQIDGSSQFPFL 126
+ LPG GLP G P L G DPG ++ GR + GA + G +
Sbjct: 770 IGLPGLPGLP-GTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQ 828
Query: 127 PGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAP-WEGYHVPICLESCHGADRLPELQQRL 185
G RG+T GL S +TG+ P +G P+ G
Sbjct: 829 QGRRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGN---------- 878
Query: 186 DLQGLAASNGAGGVLVATG----QGARGKEGGLDEALALAGEGDLHVGVQVGVPQA--DA 239
G+ G GV+ G G G G G V Q G P A +
Sbjct: 879 --PGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQ 936
Query: 240 GHVGAVLSLGPGPAAAEHEVGGAG 263
G G PGP+ H +G G
Sbjct: 937 GDKG-----NPGPSEISHVIGDKG 955
>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
sapiens]
Length = 1637
Score = 34.7 bits (78), Expect = 0.26
Identities = 61/219 (27%), Positives = 74/219 (33%), Gaps = 30/219 (13%)
Query: 67 PPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKG-------------- 112
P L LP L APA + C D G C+ + + G EKG
Sbjct: 9 PQVLLLPLLLVLLAAAPAASKGCVCKDKGQ-CFCDGAKGEK-GEKGFPGPPGSPGQKGFT 66
Query: 113 ---GANQIDGSSQFPFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICL 169
G G FP LPG G S G SPG T P+ VP C
Sbjct: 67 GPEGLPGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGLVGVPGCS 126
Query: 170 ESCHGADRLPELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVG 229
S G P L L G+ + G G +GA KE E + L +GD +
Sbjct: 127 GS-KGEQGFPGLPGTLGYPGIPGAAGLKG-----QKGAPAKE----EDIELDAKGDPGLP 176
Query: 230 VQVGVPQADAGHVGAVLSLGPGPAAAEHEVGGAGVGKGP 268
G PQ G G +GP GA +GP
Sbjct: 177 GAPG-PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGP 214
Score = 33.9 bits (76), Expect = 0.44
Identities = 37/135 (27%), Positives = 45/135 (33%), Gaps = 15/135 (11%)
Query: 64 LACPPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQF 123
L CP + PG G P A G+ + G G T E+G + + G
Sbjct: 720 LGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG------TPGFPGERGNSGE-HGEIGL 772
Query: 124 PFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQ 183
P LPG G + P G D G P E C+E GA LP L
Sbjct: 773 PGLPGLPGTPGNEGLDGPRG--------DPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNG 824
Query: 184 RLDLQGLAASNGAGG 198
QG G G
Sbjct: 825 LKGQQGRRGKTGPKG 839
Score = 30.4 bits (67), Expect = 4.9
Identities = 53/204 (25%), Positives = 69/204 (33%), Gaps = 28/204 (13%)
Query: 70 LALPGFQGLPCGAPAGGQLCGVL-DPGWGC--WDEESTGRVVSEKGGANQIDGSSQFPFL 126
+ LPG GLP G P L G DPG ++ GR + GA + G +
Sbjct: 770 IGLPGLPGLP-GTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQ 828
Query: 127 PGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAP-WEGYHVPICLESCHGADRLPELQQRL 185
G RG+T GL S +TG+ P +G P+ G
Sbjct: 829 QGRRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGN---------- 878
Query: 186 DLQGLAASNGAGGVLVATG----QGARGKEGGLDEALALAGEGDLHVGVQVGVPQA--DA 239
G+ G GV+ G G G G G V Q G P A +
Sbjct: 879 --PGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQ 936
Query: 240 GHVGAVLSLGPGPAAAEHEVGGAG 263
G G PGP+ H +G G
Sbjct: 937 GDKG-----NPGPSEISHVIGDKG 955
>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
sapiens]
Length = 1670
Score = 34.7 bits (78), Expect = 0.26
Identities = 61/219 (27%), Positives = 74/219 (33%), Gaps = 30/219 (13%)
Query: 67 PPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKG-------------- 112
P L LP L APA + C D G C+ + + G EKG
Sbjct: 9 PQVLLLPLLLVLLAAAPAASKGCVCKDKGQ-CFCDGAKGEK-GEKGFPGPPGSPGQKGFT 66
Query: 113 ---GANQIDGSSQFPFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICL 169
G G FP LPG G S G SPG T P+ VP C
Sbjct: 67 GPEGLPGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGLVGVPGCS 126
Query: 170 ESCHGADRLPELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVG 229
S G P L L G+ + G G +GA KE E + L +GD +
Sbjct: 127 GS-KGEQGFPGLPGTLGYPGIPGAAGLKG-----QKGAPAKE----EDIELDAKGDPGLP 176
Query: 230 VQVGVPQADAGHVGAVLSLGPGPAAAEHEVGGAGVGKGP 268
G PQ G G +GP GA +GP
Sbjct: 177 GAPG-PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGP 214
Score = 33.9 bits (76), Expect = 0.44
Identities = 37/135 (27%), Positives = 45/135 (33%), Gaps = 15/135 (11%)
Query: 64 LACPPALALPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQF 123
L CP + PG G P A G+ + G G T E+G + + G
Sbjct: 720 LGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPG------TPGFPGERGNSGE-HGEIGL 772
Query: 124 PFLPGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQ 183
P LPG G + P G D G P E C+E GA LP L
Sbjct: 773 PGLPGLPGTPGNEGLDGPRG--------DPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNG 824
Query: 184 RLDLQGLAASNGAGG 198
QG G G
Sbjct: 825 LKGQQGRRGKTGPKG 839
Score = 30.4 bits (67), Expect = 4.9
Identities = 53/204 (25%), Positives = 69/204 (33%), Gaps = 28/204 (13%)
Query: 70 LALPGFQGLPCGAPAGGQLCGVL-DPGWGC--WDEESTGRVVSEKGGANQIDGSSQFPFL 126
+ LPG GLP G P L G DPG ++ GR + GA + G +
Sbjct: 770 IGLPGLPGLP-GTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQ 828
Query: 127 PGHRGRTHHFPHSAPSGLGHSPGNHDTGAAAAP-WEGYHVPICLESCHGADRLPELQQRL 185
G RG+T GL S +TG+ P +G P+ G
Sbjct: 829 QGRRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGN---------- 878
Query: 186 DLQGLAASNGAGGVLVATG----QGARGKEGGLDEALALAGEGDLHVGVQVGVPQA--DA 239
G+ G GV+ G G G G G V Q G P A +
Sbjct: 879 --PGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQ 936
Query: 240 GHVGAVLSLGPGPAAAEHEVGGAG 263
G G PGP+ H +G G
Sbjct: 937 GDKG-----NPGPSEISHVIGDKG 955
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 34.3 bits (77), Expect = 0.34
Identities = 53/191 (27%), Positives = 67/191 (35%), Gaps = 32/191 (16%)
Query: 74 GFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRGRT 133
GFQGLP P G PG G + + V + GA + G PG RG
Sbjct: 663 GFQGLP--GPPG-------PPGEG---GKPGDQGVPGEAGAPGLVGPRGERGFPGERGSP 710
Query: 134 HHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLAAS 193
P GL +PG A+ P P Q LQG+
Sbjct: 711 GAQGLQGPRGLPGTPGTDGPKGASGPAGP----------------PGAQGPPGLQGMPGE 754
Query: 194 NGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLG-PGP 252
GA G +A +G RG G A +G + +G P AG G +G PGP
Sbjct: 755 RGAAG--IAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIG-PPGPAGANGEKGEVGPPGP 811
Query: 253 AAAEHEVGGAG 263
A + G G
Sbjct: 812 AGSAGARGAPG 822
Score = 30.4 bits (67), Expect = 4.9
Identities = 54/192 (28%), Positives = 63/192 (32%), Gaps = 38/192 (19%)
Query: 73 PGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRGR 132
PG +G P GQ G+ P G E + KG AN G P LPG RG
Sbjct: 506 PGERGAPGNRGFPGQ-DGLAGPK-GAPGERGPSGLAGPKG-ANGDPGRPGEPGLPGARGL 562
Query: 133 THHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLAA 192
T + P G G + AP G D P +G
Sbjct: 563 TGRPGDAGPQG--------KVGPSGAP--------------GEDGRPGPPGPQGARGQPG 600
Query: 193 SNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGP-G 251
G G A G+ + E GL A L G+P D G GA GP G
Sbjct: 601 VMGFPGPKGANGEPGKAGEKGLPGAPGLR-----------GLPGKD-GETGAAGPPGPAG 648
Query: 252 PAAAEHEVGGAG 263
PA E G G
Sbjct: 649 PAGERGEQGAPG 660
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 34.3 bits (77), Expect = 0.34
Identities = 53/191 (27%), Positives = 67/191 (35%), Gaps = 32/191 (16%)
Query: 74 GFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRGRT 133
GFQGLP P G PG G + + V + GA + G PG RG
Sbjct: 594 GFQGLP--GPPG-------PPGEG---GKPGDQGVPGEAGAPGLVGPRGERGFPGERGSP 641
Query: 134 HHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLAAS 193
P GL +PG A+ P P Q LQG+
Sbjct: 642 GAQGLQGPRGLPGTPGTDGPKGASGPAGP----------------PGAQGPPGLQGMPGE 685
Query: 194 NGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLG-PGP 252
GA G +A +G RG G A +G + +G P AG G +G PGP
Sbjct: 686 RGAAG--IAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIG-PPGPAGANGEKGEVGPPGP 742
Query: 253 AAAEHEVGGAG 263
A + G G
Sbjct: 743 AGSAGARGAPG 753
Score = 30.4 bits (67), Expect = 4.9
Identities = 54/192 (28%), Positives = 63/192 (32%), Gaps = 38/192 (19%)
Query: 73 PGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRGR 132
PG +G P GQ G+ P G E + KG AN G P LPG RG
Sbjct: 437 PGERGAPGNRGFPGQ-DGLAGPK-GAPGERGPSGLAGPKG-ANGDPGRPGEPGLPGARGL 493
Query: 133 THHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLAA 192
T + P G G + AP G D P +G
Sbjct: 494 TGRPGDAGPQG--------KVGPSGAP--------------GEDGRPGPPGPQGARGQPG 531
Query: 193 SNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGP-G 251
G G A G+ + E GL A L G+P D G GA GP G
Sbjct: 532 VMGFPGPKGANGEPGKAGEKGLPGAPGLR-----------GLPGKD-GETGAAGPPGPAG 579
Query: 252 PAAAEHEVGGAG 263
PA E G G
Sbjct: 580 PAGERGEQGAPG 591
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 33.9 bits (76), Expect = 0.44
Identities = 71/242 (29%), Positives = 75/242 (30%), Gaps = 59/242 (24%)
Query: 72 LPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRG 131
+PG GLP G GG L G PG G TG V K PG G
Sbjct: 141 VPGV-GLP-GVYPGGVLPGARFPGVGVLPGVPTGAGVKPKA--------------PGVGG 184
Query: 132 RTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLA 191
P P G G PG P GY PI G LP +L
Sbjct: 185 AFAGIPGVGPFG-GPQPG--------VPL-GY--PIKAPKLPGGYGLPYTTGKLPY---- 228
Query: 192 ASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPG 251
G GGV GA GK G G VG A A A G G
Sbjct: 229 -GYGPGGVA-----GAAGKAG-------------YPTGTGVGPQAAAAAAAKAAAKFGAG 269
Query: 252 PAAAEHEVGGAGV--------GKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGW 303
A VGGAGV G G V A AA A G G + G G+
Sbjct: 270 AAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF 329
Query: 304 HP 305
P
Sbjct: 330 GP 331
Score = 32.3 bits (72), Expect = 1.3
Identities = 32/112 (28%), Positives = 39/112 (34%), Gaps = 3/112 (2%)
Query: 189 GLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSL 248
G+A G GGV A A+ A A G G +GV VGVP G L +
Sbjct: 495 GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGV 554
Query: 249 GPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADG 300
G G G K V G + AL G G+ G + G
Sbjct: 555 GAGVPGFGAVPGALAAAKAAKYGAAVPGVLG---GLGALGGVGIPGGVVGAG 603
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 33.9 bits (76), Expect = 0.44
Identities = 71/242 (29%), Positives = 75/242 (30%), Gaps = 59/242 (24%)
Query: 72 LPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRG 131
+PG GLP G GG L G PG G TG V K PG G
Sbjct: 146 VPGV-GLP-GVYPGGVLPGARFPGVGVLPGVPTGAGVKPKA--------------PGVGG 189
Query: 132 RTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLA 191
P P G G PG P GY PI G LP +L
Sbjct: 190 AFAGIPGVGPFG-GPQPG--------VPL-GY--PIKAPKLPGGYGLPYTTGKLPY---- 233
Query: 192 ASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPG 251
G GGV GA GK G G VG A A A G G
Sbjct: 234 -GYGPGGVA-----GAAGKAG-------------YPTGTGVGPQAAAAAAAKAAAKFGAG 274
Query: 252 PAAAEHEVGGAGV--------GKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGW 303
A VGGAGV G G V A AA A G G + G G+
Sbjct: 275 AAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF 334
Query: 304 HP 305
P
Sbjct: 335 GP 336
Score = 33.5 bits (75), Expect = 0.57
Identities = 51/182 (28%), Positives = 66/182 (36%), Gaps = 34/182 (18%)
Query: 140 APSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLAASNGAGGV 199
A +GLG PG G +AAP VP + GA P + L G+ GGV
Sbjct: 108 AGAGLGGVPGVGGLGVSAAP----SVPGAVVPQPGAGVKPGKVPGVGLPGVY----PGGV 159
Query: 200 L-------------VATGQGARGKEGGLDEALA-LAGEG-------DLHVGVQVGVPQAD 238
L V TG G + K G+ A A + G G + +G + P+
Sbjct: 160 LPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLP 219
Query: 239 AG----HVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAG-EGLR 293
G + L G GP G AG G V A AA+ AG G+
Sbjct: 220 GGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVL 279
Query: 294 PG 295
PG
Sbjct: 280 PG 281
Score = 32.3 bits (72), Expect = 1.3
Identities = 32/112 (28%), Positives = 39/112 (34%), Gaps = 3/112 (2%)
Query: 189 GLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSL 248
G+A G GGV A A+ A A G G +GV VGVP G L +
Sbjct: 519 GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGV 578
Query: 249 GPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADG 300
G G G K V G + AL G G+ G + G
Sbjct: 579 GAGVPGFGAVPGALAAAKAAKYGAAVPGVLG---GLGALGGVGIPGGVVGAG 627
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 33.9 bits (76), Expect = 0.44
Identities = 71/242 (29%), Positives = 75/242 (30%), Gaps = 59/242 (24%)
Query: 72 LPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRG 131
+PG GLP G GG L G PG G TG V K PG G
Sbjct: 146 VPGV-GLP-GVYPGGVLPGARFPGVGVLPGVPTGAGVKPKA--------------PGVGG 189
Query: 132 RTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLA 191
P P G G PG P GY PI G LP +L
Sbjct: 190 AFAGIPGVGPFG-GPQPG--------VPL-GY--PIKAPKLPGGYGLPYTTGKLPY---- 233
Query: 192 ASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPG 251
G GGV GA GK G G VG A A A G G
Sbjct: 234 -GYGPGGVA-----GAAGKAG-------------YPTGTGVGPQAAAAAAAKAAAKFGAG 274
Query: 252 PAAAEHEVGGAGV--------GKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGW 303
A VGGAGV G G V A AA A G G + G G+
Sbjct: 275 AAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF 334
Query: 304 HP 305
P
Sbjct: 335 GP 336
Score = 33.5 bits (75), Expect = 0.57
Identities = 51/182 (28%), Positives = 66/182 (36%), Gaps = 34/182 (18%)
Query: 140 APSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLAASNGAGGV 199
A +GLG PG G +AAP VP + GA P + L G+ GGV
Sbjct: 108 AGAGLGGVPGVGGLGVSAAP----SVPGAVVPQPGAGVKPGKVPGVGLPGVY----PGGV 159
Query: 200 L-------------VATGQGARGKEGGLDEALA-LAGEG-------DLHVGVQVGVPQAD 238
L V TG G + K G+ A A + G G + +G + P+
Sbjct: 160 LPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLP 219
Query: 239 AG----HVGAVLSLGPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAG-EGLR 293
G + L G GP G AG G V A AA+ AG G+
Sbjct: 220 GGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVL 279
Query: 294 PG 295
PG
Sbjct: 280 PG 281
Score = 32.3 bits (72), Expect = 1.3
Identities = 32/112 (28%), Positives = 39/112 (34%), Gaps = 3/112 (2%)
Query: 189 GLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSL 248
G+A G GGV A A+ A A G G +GV VGVP G L +
Sbjct: 500 GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGV 559
Query: 249 GPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADG 300
G G G K V G + AL G G+ G + G
Sbjct: 560 GAGVPGFGAVPGALAAAKAAKYGAAVPGVLG---GLGALGGVGIPGGVVGAG 608
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 33.9 bits (76), Expect = 0.44
Identities = 71/242 (29%), Positives = 75/242 (30%), Gaps = 59/242 (24%)
Query: 72 LPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRG 131
+PG GLP G GG L G PG G TG V K PG G
Sbjct: 131 VPGV-GLP-GVYPGGVLPGARFPGVGVLPGVPTGAGVKPKA--------------PGVGG 174
Query: 132 RTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLA 191
P P G G PG P GY PI G LP +L
Sbjct: 175 AFAGIPGVGPFG-GPQPG--------VPL-GY--PIKAPKLPGGYGLPYTTGKLPY---- 218
Query: 192 ASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPG 251
G GGV GA GK G G VG A A A G G
Sbjct: 219 -GYGPGGVA-----GAAGKAG-------------YPTGTGVGPQAAAAAAAKAAAKFGAG 259
Query: 252 PAAAEHEVGGAGV--------GKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGW 303
A VGGAGV G G V A AA A G G + G G+
Sbjct: 260 AAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF 319
Query: 304 HP 305
P
Sbjct: 320 GP 321
Score = 32.3 bits (72), Expect = 1.3
Identities = 32/112 (28%), Positives = 39/112 (34%), Gaps = 3/112 (2%)
Query: 189 GLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSL 248
G+A G GGV A A+ A A G G +GV VGVP G L +
Sbjct: 485 GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGV 544
Query: 249 GPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADG 300
G G G K V G + AL G G+ G + G
Sbjct: 545 GAGVPGFGAVPGALAAAKAAKYGAAVPGVLG---GLGALGGVGIPGGVVGAG 593
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 33.9 bits (76), Expect = 0.44
Identities = 71/242 (29%), Positives = 75/242 (30%), Gaps = 59/242 (24%)
Query: 72 LPGFQGLPCGAPAGGQLCGVLDPGWGCWDEESTGRVVSEKGGANQIDGSSQFPFLPGHRG 131
+PG GLP G GG L G PG G TG V K PG G
Sbjct: 141 VPGV-GLP-GVYPGGVLPGARFPGVGVLPGVPTGAGVKPKA--------------PGVGG 184
Query: 132 RTHHFPHSAPSGLGHSPGNHDTGAAAAPWEGYHVPICLESCHGADRLPELQQRLDLQGLA 191
P P G G PG P GY PI G LP +L
Sbjct: 185 AFAGIPGVGPFG-GPQPG--------VPL-GY--PIKAPKLPGGYGLPYTTGKLPY---- 228
Query: 192 ASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPG 251
G GGV GA GK G G VG A A A G G
Sbjct: 229 -GYGPGGVA-----GAAGKAG-------------YPTGTGVGPQAAAAAAAKAAAKFGAG 269
Query: 252 PAAAEHEVGGAGV--------GKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGW 303
A VGGAGV G G V A AA A G G + G G+
Sbjct: 270 AAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGF 329
Query: 304 HP 305
P
Sbjct: 330 GP 331
Score = 32.3 bits (72), Expect = 1.3
Identities = 32/112 (28%), Positives = 39/112 (34%), Gaps = 3/112 (2%)
Query: 189 GLAASNGAGGVLVATGQGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSL 248
G+A G GGV A A+ A A G G +GV VGVP G L +
Sbjct: 514 GVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGV 573
Query: 249 GPGPAAAEHEVGGAGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADG 300
G G G K V G + AL G G+ G + G
Sbjct: 574 GAGVPGFGAVPGALAAAKAAKYGAAVPGVLG---GLGALGGVGIPGGVVGAG 622
>gi|169169912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 184
Score = 33.9 bits (76), Expect = 0.44
Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 14/123 (11%)
Query: 205 QGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPGPAAAE---HEVGG 261
+G G+ A AG H+G VP A HVG GPGP A G
Sbjct: 60 RGGTGRVPAPPRACVCAGSWQGHLGRAARVPCASHTHVG-----GPGPQAGPACGFRALG 114
Query: 262 AGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGWHPCRQLARQASGHKQEVP 321
+ GP A G ++AL+ + PG A + P ++ A SG + V
Sbjct: 115 SAQSPGPATAAGAPG------FSRALSPGPVPPGWRAAPRAGAPHQRAAATGSGGSRSVG 168
Query: 322 AGQ 324
G+
Sbjct: 169 GGK 171
>gi|169179759 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 33.9 bits (76), Expect = 0.44
Identities = 37/145 (25%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 435 ADIECASARCQCQVVESGIRCGEAMGPCQGQWRWGQQQQEEAEAE-GRPASHHGGLKWCS 493
A EC R ++G CG A P +GQW WG ++ G G W +
Sbjct: 46 AGSECVGHRAP----DAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGA 101
Query: 494 ----RGVS-WAAWHIRSVQLPQGSGDGHEMAAGGHSLAYLVGHRRGPSSSWRCQEHVSQS 548
RG S W A Q+ +G H + RRGP +C
Sbjct: 102 GSPMRGQSVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGR--QC------G 153
Query: 549 PSLPPHNAIVPSPTHPNKPGQAAQP 573
SLP ++++ P P++ A P
Sbjct: 154 NSLPEPSSMLTCPQQPHRATSPAAP 178
>gi|239749005 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 33.9 bits (76), Expect = 0.44
Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 14/123 (11%)
Query: 205 QGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPGPAAAE---HEVGG 261
+G G+ A AG H+G VP A HVG GPGP A G
Sbjct: 54 RGGTGRVPAPPRACVCAGSWQGHLGRAARVPCASHTHVG-----GPGPQAGPACGFRALG 108
Query: 262 AGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGWHPCRQLARQASGHKQEVP 321
+ GP A G ++AL+ + PG A + P ++ A SG + V
Sbjct: 109 SAQSPGPATAAGAPG------FSRALSPGPVPPGWRAAPRAGAPHQRAAATGSGGSRSVG 162
Query: 322 AGQ 324
G+
Sbjct: 163 GGK 165
>gi|169180158 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 33.9 bits (76), Expect = 0.44
Identities = 37/145 (25%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 435 ADIECASARCQCQVVESGIRCGEAMGPCQGQWRWGQQQQEEAEAE-GRPASHHGGLKWCS 493
A EC R ++G CG A P +GQW WG ++ G G W +
Sbjct: 46 AGSECVGHRAP----DAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGA 101
Query: 494 ----RGVS-WAAWHIRSVQLPQGSGDGHEMAAGGHSLAYLVGHRRGPSSSWRCQEHVSQS 548
RG S W A Q+ +G H + RRGP +C
Sbjct: 102 GSPMRGQSVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGR--QC------G 153
Query: 549 PSLPPHNAIVPSPTHPNKPGQAAQP 573
SLP ++++ P P++ A P
Sbjct: 154 NSLPEPSSMLTCPQQPHRATSPAAP 178
>gi|239743025 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 33.9 bits (76), Expect = 0.44
Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 14/123 (11%)
Query: 205 QGARGKEGGLDEALALAGEGDLHVGVQVGVPQADAGHVGAVLSLGPGPAAAE---HEVGG 261
+G G+ A AG H+G VP A HVG GPGP A G
Sbjct: 54 RGGTGRVPAPPRACVCAGSWQGHLGRAARVPCASHTHVG-----GPGPQAGPACGFRALG 108
Query: 262 AGVGKGPDVAVVVVGEVAHHQAAQALAGEGLRPGQLADGQGWHPCRQLARQASGHKQEVP 321
+ GP A G ++AL+ + PG A + P ++ A SG + V
Sbjct: 109 SAQSPGPATAAGAPG------FSRALSPGPVPPGWRAAPRAGAPHQRAAATGSGGSRSVG 162
Query: 322 AGQ 324
G+
Sbjct: 163 GGK 165
>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
Length = 684
Score = 33.9 bits (76), Expect = 0.44
Identities = 47/169 (27%), Positives = 61/169 (36%), Gaps = 18/169 (10%)
Query: 111 KGGANQIDGSSQFPFLPGH---------RGRTHHFPHSAPSGLGHSPGNHDTGAAAAPWE 161
+ GA G + P LPG RGR + PSG PG D G E
Sbjct: 323 RNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEAGPSGEPGVPG--DAGMPGERGE 380
Query: 162 GYHVPICLESCHGADRLPELQQRLDLQGLAASNGAGGVLVATGQGARGKEGGLDEALALA 221
H G P QG S G G + QG RG G A
Sbjct: 381 AGHRGSA--GALGPQGPPGAPGVRGFQGQKGSMGDPG--LPGPQGLRGDVGDRGPGGAAG 436
Query: 222 GEGDLHVGVQVGVPQADAGHVGAVLSLGP-GPAAAEHEVGGAGVGKGPD 269
+GD + G+P D G +G +GP G + + E+G G +GP+
Sbjct: 437 PKGDQGIAGSDGLP-GDKGELGPSGLVGPKGESGSRGELGPKGT-QGPN 483
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,946,254
Number of Sequences: 37866
Number of extensions: 1623639
Number of successful extensions: 6233
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 5983
Number of HSP's gapped (non-prelim): 353
length of query: 600
length of database: 18,247,518
effective HSP length: 108
effective length of query: 492
effective length of database: 14,157,990
effective search space: 6965731080
effective search space used: 6965731080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.