LOC100130465 19822

Name: LOC100130465	Sequence: fasta or formatted (178aa)		NCBI GI: 239749005
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt prot {184aa} PREDICTED: hypothetical protein alt mRNA {178aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 17.4 31 3 C cysteine 2.8 5 1 D aspartate 1.1 2 1 E glutamate 1.1 2 2 F phenylalanine 1.1 2 1 G glycine 18.0 32 3 H histidine 3.4 6 1 I isoleucine 1.1 2 1 K lysine 0.6 1 1 L leucine 5.1 9 1 M methionine 0.6 1 1 N asparagine 0.0 0 0 P proline 13.5 24 2 Q glutamine 4.5 8 1 R arginine 10.7 19 1 S serine 7.3 13 1 T threonine 5.1 9 1 V valine 4.5 8 1 W tryptophan 2.2 4 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100130465 1.000 PREDICTED: hypothetical protein LOC100130465 0.941 PREDICTED: hypothetical protein COL1A1 0.068 alpha 1 type I collagen preproprotein COL3A1 0.068 collagen type III alpha 1 preproprotein GATA4 0.062 GATA binding protein 4 C9orf75 0.062 hypothetical protein LOC286262 isoform 2 C9orf75 0.062 hypothetical protein LOC286262 isoform 1 SYN1 0.056 synapsin I isoform Ib HCN2 0.054 hyperpolarization activated cyclic nucleotide-gated... SYN1 0.054 synapsin I isoform Ia COL18A1 0.054 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.054 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.054 alpha 1 type XVIII collagen isoform 1 precursor [Ho... LOC100292576 0.054 PREDICTED: hypothetical protein LOC100288860 0.054 PREDICTED: hypothetical protein LOC100288860 0.054 PREDICTED: hypothetical protein XP_002343712 COL10A1 0.051 type X collagen alpha 1 precursor LOC100293337 0.048 PREDICTED: hypothetical protein LOC100290919 0.048 PREDICTED: hypothetical protein XP_002347810 LOC100288369 0.048 PREDICTED: hypothetical protein XP_002343563 LOC645602 0.045 PREDICTED: hypothetical protein LOC645602 0.045 PREDICTED: hypothetical protein LOC645602 0.045 PREDICTED: hypothetical protein TPRX1 0.045 tetra-peptide repeat homeobox ARID1B 0.045 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.045 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.045 AT rich interactive domain 1B (SWI1-like) isoform 3 ... COL2A1 0.042 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.042 collagen, type II, alpha 1 isoform 2 precursor [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.