Guide to the Human Genome
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Search of human proteins with 239757817

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
         (227 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]          466   e-132
gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]          260   6e-70
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]          260   6e-70
gi|4504425 high-mobility group box 1 [Homo sapiens]                   168   4e-42
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]          166   1e-41
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]          166   1e-41
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]          166   1e-41
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]           162   2e-40
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]            146   1e-35
gi|194688135 high-mobility group box 2 [Homo sapiens]                 129   2e-30
gi|194688133 high-mobility group box 2 [Homo sapiens]                 129   2e-30
gi|11321591 high-mobility group box 2 [Homo sapiens]                  129   2e-30
gi|169212060 PREDICTED: high mobility group protein B3-like prot...   114   7e-26
gi|239745831 PREDICTED: high mobility group protein B3-like prot...   114   7e-26
gi|71143137 high-mobility group box 3 [Homo sapiens]                  113   1e-25
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...   111   4e-25
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...   111   4e-25
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...   111   4e-25
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...   111   4e-25
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...   108   4e-24
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...   108   4e-24
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...   108   4e-24
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]          100   2e-21
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]          100   2e-21
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...   100   2e-21
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     78   5e-15
gi|57232750 HMG2 like isoform 1 [Homo sapiens]                         62   3e-10
gi|57232748 HMG2 like isoform 2 [Homo sapiens]                         62   3e-10
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]       56   3e-08
gi|149408144 TOX high mobility group box family member 2 isoform...    55   4e-08

>gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 227

 Score =  466 bits (1198), Expect = e-132
 Identities = 227/227 (100%), Positives = 227/227 (100%)

Query: 1   MSDSIGFKKKFRLQSGESEEAASGSHSHSHCSTLSSIETAPGQVRAKQALGDSALLKKKS 60
           MSDSIGFKKKFRLQSGESEEAASGSHSHSHCSTLSSIETAPGQVRAKQALGDSALLKKKS
Sbjct: 1   MSDSIGFKKKFRLQSGESEEAASGSHSHSHCSTLSSIETAPGQVRAKQALGDSALLKKKS 60

Query: 61  STQMLQSTSQSFLRSAQRAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDV 120
           STQMLQSTSQSFLRSAQRAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDV
Sbjct: 61  STQMLQSTSQSFLRSAQRAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDV 120

Query: 121 AKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKK 180
           AKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKK
Sbjct: 121 AKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKK 180

Query: 181 EEDKMRNMKIKKMATNCLVWYRGCKLAWEFKAGSCWCTAQISYIRGW 227
           EEDKMRNMKIKKMATNCLVWYRGCKLAWEFKAGSCWCTAQISYIRGW
Sbjct: 181 EEDKMRNMKIKKMATNCLVWYRGCKLAWEFKAGSCWCTAQISYIRGW 227


>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  260 bits (665), Expect = 6e-70
 Identities = 133/154 (86%), Positives = 135/154 (87%), Gaps = 19/154 (12%)

Query: 59  KSSTQMLQSTSQSFLRSAQR-------------------AETKMKFEDPNAPKSPPLAFF 99
           +SSTQMLQSTSQSFLRSAQR                   AETKMKFEDPNAPKSPPLAFF
Sbjct: 13  RSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFF 72

Query: 100 MFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGG 159
           MFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGG
Sbjct: 73  MFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGG 132

Query: 160 KGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKM 193
           KGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKK+
Sbjct: 133 KGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKI 166


>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  260 bits (665), Expect = 6e-70
 Identities = 133/154 (86%), Positives = 135/154 (87%), Gaps = 19/154 (12%)

Query: 59  KSSTQMLQSTSQSFLRSAQR-------------------AETKMKFEDPNAPKSPPLAFF 99
           +SSTQMLQSTSQSFLRSAQR                   AETKMKFEDPNAPKSPPLAFF
Sbjct: 13  RSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFF 72

Query: 100 MFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGG 159
           MFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGG
Sbjct: 73  MFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGG 132

Query: 160 KGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKM 193
           KGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKK+
Sbjct: 133 KGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKI 166


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score =  168 bits (425), Expect = 4e-42
 Identities = 83/108 (76%), Positives = 90/108 (83%), Gaps = 1/108 (0%)

Query: 78  RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDK 136
           + ETK KF+DPNAPK PP AFF+F SE  PKIK EHPGLSI DVAKKLGEMWN  A DDK
Sbjct: 82  KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141

Query: 137 HPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184
            PYEKKA KLKEKYEKDIAA+  KGKPDAAKKG +KAEK KKKKEE++
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 189



 Score = 36.6 bits (83), Expect = 0.018
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 87  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSI--SDVAKKLGEMWNYIAEDDKHPYEKK 142
           DP  P  K    AFF+ +  +  K K+HP  S+  S+ +KK  E W  ++  +K  +E  
Sbjct: 5   DPKKPRGKMSSYAFFVQTCREEHK-KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 63

Query: 143 AVKLKEKYEKDIAAF 157
           A   K +YE+++  +
Sbjct: 64  AKADKARYEREMKTY 78


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score =  166 bits (421), Expect = 1e-41
 Identities = 95/180 (52%), Positives = 113/180 (62%), Gaps = 24/180 (13%)

Query: 29  SHCSTLSSIETAPGQVRAKQALGD-----SALLKKKSSTQ-------------MLQSTSQ 70
           SHCSTLSSIETAPG+VR      +     S   K  S+ +             M ++   
Sbjct: 146 SHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKA 205

Query: 71  SFLRSAQ-----RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKL 124
            + R  +     + ETK KF+DPNAPK PP AFF++ SE  PKIK E PGLS  DVAKKL
Sbjct: 206 HYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKL 265

Query: 125 GEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184
           GEMWN  A DDK PYEK++ KLKEKYEKDIAA+  KGK DAA  G +KA K KKKKEE++
Sbjct: 266 GEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEE 325


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score =  166 bits (421), Expect = 1e-41
 Identities = 95/180 (52%), Positives = 113/180 (62%), Gaps = 24/180 (13%)

Query: 29  SHCSTLSSIETAPGQVRAKQALGD-----SALLKKKSSTQ-------------MLQSTSQ 70
           SHCSTLSSIETAPG+VR      +     S   K  S+ +             M ++   
Sbjct: 146 SHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKA 205

Query: 71  SFLRSAQ-----RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKL 124
            + R  +     + ETK KF+DPNAPK PP AFF++ SE  PKIK E PGLS  DVAKKL
Sbjct: 206 HYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKL 265

Query: 125 GEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184
           GEMWN  A DDK PYEK++ KLKEKYEKDIAA+  KGK DAA  G +KA K KKKKEE++
Sbjct: 266 GEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEE 325


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score =  166 bits (421), Expect = 1e-41
 Identities = 95/180 (52%), Positives = 113/180 (62%), Gaps = 24/180 (13%)

Query: 29  SHCSTLSSIETAPGQVRAKQALGD-----SALLKKKSSTQ-------------MLQSTSQ 70
           SHCSTLSSIETAPG+VR      +     S   K  S+ +             M ++   
Sbjct: 146 SHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKA 205

Query: 71  SFLRSAQ-----RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKL 124
            + R  +     + ETK KF+DPNAPK PP AFF++ SE  PKIK E PGLS  DVAKKL
Sbjct: 206 HYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKL 265

Query: 125 GEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184
           GEMWN  A DDK PYEK++ KLKEKYEKDIAA+  KGK DAA  G +KA K KKKKEE++
Sbjct: 266 GEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEE 325


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score =  162 bits (411), Expect = 2e-40
 Identities = 81/108 (75%), Positives = 89/108 (82%), Gaps = 1/108 (0%)

Query: 78  RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDK 136
           + ETK KF+DPNAPK PP AFF+F SE  PKIK EHPGLSI DVAKKLGEMWN  A DDK
Sbjct: 82  KGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141

Query: 137 HPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184
            P EKKA KLKEKYEKDIAA+  KGKP+AAKKG +KAEK KKKKEE++
Sbjct: 142 QPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKKKEEEE 189



 Score = 29.6 bits (65), Expect = 2.2
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 87  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSI--SDVAKKLGEMWNYIAEDDKHPYEKK 142
           DP  P  K    AFF+ +  +  K K+H   S+  S+ + K  E W  ++  +K  +E  
Sbjct: 5   DPKKPRGKMSSYAFFVQTCREEHK-KKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDM 63

Query: 143 AVKLKEKYEKDIAAF 157
           A   K  YE+ +  +
Sbjct: 64  AKADKTHYERQMKTY 78


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score =  146 bits (369), Expect = 1e-35
 Identities = 74/108 (68%), Positives = 84/108 (77%), Gaps = 1/108 (0%)

Query: 78  RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDK 136
           + E K KF+DPNAPK PPLAFF+F SE  PKIK EHPGLSI DV KKL  MWN  A  DK
Sbjct: 756 KGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADK 815

Query: 137 HPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184
             YEKKA KLKEKY+KDIAA+  KGKP++AKK  +KAEK KKKKEE++
Sbjct: 816 QFYEKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEE 863



 Score = 28.5 bits (62), Expect = 4.9
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 110 KEHPGLSI--SDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAK 167
           K++P  S+  S+  KK  E W  I   +K  +E  A   K  YE+++  +     P   K
Sbjct: 703 KKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTY---IPPKGEK 759

Query: 168 KGAIKAEKCKKK 179
           K   K     K+
Sbjct: 760 KKKFKDPNAPKR 771


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  129 bits (325), Expect = 2e-30
 Identities = 66/107 (61%), Positives = 77/107 (71%), Gaps = 1/107 (0%)

Query: 78  RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDK 136
           + + K K +DPNAPK PP AFF+F SE  PKIK EHPGLSI D AKKLGEMW+  +  DK
Sbjct: 82  KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141

Query: 137 HPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEED 183
            PYE+KA KLKEKYEKDIAA+  KGK +A KKG  +    KKK E +
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE 188



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 87  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSIS--DVAKKLGEMWNYIAEDDKHPYEKK 142
           DPN P  K    AFF+ +  +  K K+HP  S++  + +KK  E W  ++  +K  +E  
Sbjct: 5   DPNKPRGKMSSYAFFVQTCREEHK-KKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDM 63

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 179
           A   K +Y++++  +     P   KKG  K     K+
Sbjct: 64  AKSDKARYDREMKNY---VPPKGDKKGKKKDPNAPKR 97


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  129 bits (325), Expect = 2e-30
 Identities = 66/107 (61%), Positives = 77/107 (71%), Gaps = 1/107 (0%)

Query: 78  RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDK 136
           + + K K +DPNAPK PP AFF+F SE  PKIK EHPGLSI D AKKLGEMW+  +  DK
Sbjct: 82  KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141

Query: 137 HPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEED 183
            PYE+KA KLKEKYEKDIAA+  KGK +A KKG  +    KKK E +
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE 188



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 87  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSIS--DVAKKLGEMWNYIAEDDKHPYEKK 142
           DPN P  K    AFF+ +  +  K K+HP  S++  + +KK  E W  ++  +K  +E  
Sbjct: 5   DPNKPRGKMSSYAFFVQTCREEHK-KKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDM 63

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 179
           A   K +Y++++  +     P   KKG  K     K+
Sbjct: 64  AKSDKARYDREMKNY---VPPKGDKKGKKKDPNAPKR 97


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  129 bits (325), Expect = 2e-30
 Identities = 66/107 (61%), Positives = 77/107 (71%), Gaps = 1/107 (0%)

Query: 78  RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDK 136
           + + K K +DPNAPK PP AFF+F SE  PKIK EHPGLSI D AKKLGEMW+  +  DK
Sbjct: 82  KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141

Query: 137 HPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEED 183
            PYE+KA KLKEKYEKDIAA+  KGK +A KKG  +    KKK E +
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE 188



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 87  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSIS--DVAKKLGEMWNYIAEDDKHPYEKK 142
           DPN P  K    AFF+ +  +  K K+HP  S++  + +KK  E W  ++  +K  +E  
Sbjct: 5   DPNKPRGKMSSYAFFVQTCREEHK-KKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDM 63

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 179
           A   K +Y++++  +     P   KKG  K     K+
Sbjct: 64  AKSDKARYDREMKNY---VPPKGDKKGKKKDPNAPKR 97


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  114 bits (285), Expect = 7e-26
 Identities = 56/102 (54%), Positives = 72/102 (70%), Gaps = 1/102 (0%)

Query: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142
           K +DPNAPK PP  FF+F SE CPK K  +PG+ I DVAKKLGEMW  + + +K PY  +
Sbjct: 85  KKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQ 144

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184
           A KLKEKYEKD+A +  KGK D AK  A  A+K  ++++ED+
Sbjct: 145 AAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVEEEDEDE 186



 Score = 33.9 bits (76), Expect = 0.12
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)

Query: 87  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 143
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  +++ +K  + + A
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64

Query: 144 VKLKEKYEKDI----AAFGGKGK-PDAAKK 168
              K  Y+++I     A GGK K P+A K+
Sbjct: 65  KADKVHYDQEIKDYGPAKGGKKKDPNAPKR 94


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  114 bits (285), Expect = 7e-26
 Identities = 56/102 (54%), Positives = 72/102 (70%), Gaps = 1/102 (0%)

Query: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142
           K +DPNAPK PP  FF+F SE CPK K  +PG+ I DVAKKLGEMW  + + +K PY  +
Sbjct: 85  KKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQ 144

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184
           A KLKEKYEKD+A +  KGK D AK  A  A+K  ++++ED+
Sbjct: 145 AAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVEEEDEDE 186



 Score = 33.9 bits (76), Expect = 0.12
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)

Query: 87  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 143
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  +++ +K  + + A
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64

Query: 144 VKLKEKYEKDI----AAFGGKGK-PDAAKK 168
              K  Y+++I     A GGK K P+A K+
Sbjct: 65  KADKVHYDQEIKDYGPAKGGKKKDPNAPKR 94


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score =  113 bits (283), Expect = 1e-25
 Identities = 61/102 (59%), Positives = 72/102 (70%), Gaps = 3/102 (2%)

Query: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142
           K +DPNAPK PP  FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  K
Sbjct: 86  KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITK 145

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184
           A KLKEKYEKD+A +  KGK D AK  A  A   KK +EED+
Sbjct: 146 AAKLKEKYEKDVADYKSKGKFDGAKGPAKVAR--KKVEEEDE 185



 Score = 33.9 bits (76), Expect = 0.12
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 87  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 143
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  ++  +K  +++ A
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64

Query: 144 VKLKEKYEKDI----AAFGGKGKPD 164
              K +Y++++     A GGK K D
Sbjct: 65  KADKVRYDREMKDYGPAKGGKKKKD 89


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  111 bits (278), Expect = 4e-25
 Identities = 62/131 (47%), Positives = 82/131 (62%), Gaps = 3/131 (2%)

Query: 57  KKKSSTQMLQSTSQSFLRSAQRAETK--MKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HP 113
           K+KS    +  T +       +   K   K +DP+APK PP  FF+FSSE  PKIK  +P
Sbjct: 52  KEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNP 111

Query: 114 GLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKA 173
           G+SI DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A
Sbjct: 112 GISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVA 171

Query: 174 EKCKKKKEEDK 184
            K  ++++ED+
Sbjct: 172 WKKVEEEDEDE 182



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 87  DPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKL 146
           DP  PK    A+  F      + K+   ++ ++ +KK  E W  ++  +K  +++ A   
Sbjct: 5   DPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKTD 64

Query: 147 KEKYEKDI--AAFGGKGKPD 164
           K   ++++   A GGK K D
Sbjct: 65  KVHCDREMKGPAKGGKKKKD 84


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  111 bits (278), Expect = 4e-25
 Identities = 62/131 (47%), Positives = 82/131 (62%), Gaps = 3/131 (2%)

Query: 57  KKKSSTQMLQSTSQSFLRSAQRAETK--MKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HP 113
           K+KS    +  T +       +   K   K +DP+APK PP  FF+FSSE  PKIK  +P
Sbjct: 52  KEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNP 111

Query: 114 GLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKA 173
           G+SI DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A
Sbjct: 112 GISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVA 171

Query: 174 EKCKKKKEEDK 184
            K  ++++ED+
Sbjct: 172 WKKVEEEDEDE 182



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 87  DPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKL 146
           DP  PK    A+  F      + K+   ++ ++ +KK  E W  ++  +K  +++ A   
Sbjct: 5   DPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKTD 64

Query: 147 KEKYEKDI--AAFGGKGKPD 164
           K   ++++   A GGK K D
Sbjct: 65  KVHCDREMKGPAKGGKKKKD 84


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score =  111 bits (278), Expect = 4e-25
 Identities = 62/131 (47%), Positives = 82/131 (62%), Gaps = 3/131 (2%)

Query: 57  KKKSSTQMLQSTSQSFLRSAQRAETK--MKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HP 113
           K+KS    +  T +       +   K   K +DP+APK PP  FF+FSSE  PKIK  +P
Sbjct: 34  KEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNP 93

Query: 114 GLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKA 173
           G+SI DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A
Sbjct: 94  GISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVA 153

Query: 174 EKCKKKKEEDK 184
            K  ++++ED+
Sbjct: 154 WKKVEEEDEDE 164


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score =  111 bits (278), Expect = 4e-25
 Identities = 62/131 (47%), Positives = 82/131 (62%), Gaps = 3/131 (2%)

Query: 57  KKKSSTQMLQSTSQSFLRSAQRAETK--MKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HP 113
           K+KS    +  T +       +   K   K +DP+APK PP  FF+FSSE  PKIK  +P
Sbjct: 52  KEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNP 111

Query: 114 GLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKA 173
           G+SI DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A
Sbjct: 112 GISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVA 171

Query: 174 EKCKKKKEEDK 184
            K  ++++ED+
Sbjct: 172 WKKVEEEDEDE 182



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 87  DPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKL 146
           DP  PK    A+  F      + K+   ++ ++ +KK  E W  ++  +K  +++ A   
Sbjct: 5   DPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKTD 64

Query: 147 KEKYEKDI--AAFGGKGKPD 164
           K   ++++   A GGK K D
Sbjct: 65  KVHCDREMKGPAKGGKKKKD 84


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  108 bits (270), Expect = 4e-24
 Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 2/110 (1%)

Query: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142
           K +DPNAPK PP  FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  K
Sbjct: 85  KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTK 144

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 191
           A KLKEKYEKD+     KGK   AK+ A +  +K +++ EED+    K K
Sbjct: 145 AAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  108 bits (270), Expect = 4e-24
 Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 2/110 (1%)

Query: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142
           K +DPNAPK PP  FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  K
Sbjct: 85  KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTK 144

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 191
           A KLKEKYEKD+     KGK   AK+ A +  +K +++ EED+    K K
Sbjct: 145 AAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  108 bits (270), Expect = 4e-24
 Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 2/110 (1%)

Query: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142
           K +DPNAPK PP  FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  K
Sbjct: 85  KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTK 144

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 191
           A KLKEKYEKD+     KGK   AK+ A +  +K +++ EED+    K K
Sbjct: 145 AAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 4/113 (3%)

Query: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142
           K +DPNA K P   FF+F SE  PKIK  +PG+SI D+AKKLGEMW   ++ +K PY  K
Sbjct: 85  KKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITK 144

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAK---KGAIKAEKCKKKKEEDKMRNMKIKK 192
           A  LKEKYEKD+A +  KGK D+AK   K A K  K K K++E++    + KK
Sbjct: 145 AADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVKEKDKEDEEEEEEEEEKK 197


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 4/113 (3%)

Query: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142
           K +DPNA K P   FF+F SE  PKIK  +PG+SI D+AKKLGEMW   ++ +K PY  K
Sbjct: 85  KKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITK 144

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAK---KGAIKAEKCKKKKEEDKMRNMKIKK 192
           A  LKEKYEKD+A +  KGK D+AK   K A K  K K K++E++    + KK
Sbjct: 145 AADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVKEKDKEDEEEEEEEEEKK 197


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
           sapiens]
          Length = 201

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 4/113 (3%)

Query: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142
           K +DPNA K P   FF+F SE  PKIK  +PG+SI D+AKKLGEMW   ++ +K PY  K
Sbjct: 85  KKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITK 144

Query: 143 AVKLKEKYEKDIAAFGGKGKPDAAK---KGAIKAEKCKKKKEEDKMRNMKIKK 192
           A  LKEKYEKD+A +  KGK D+AK   K A K  K K K++E++    + KK
Sbjct: 145 AADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVKEKDKEDEEEEEEEEEKK 197


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 15/184 (8%)

Query: 2   SDSIGFKKKFRLQSGESEEAASGSHSHSHCSTLSSIETAPGQVRAKQALGDSALLKKKSS 61
           SD  G +       GE EE  +     +  ++ SS E            GDS   +KK  
Sbjct: 471 SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNE------------GDSDRDEKKRK 518

Query: 62  TQMLQSTSQSFLRSAQRAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDV 120
            Q+ ++      +S ++     K +DPNAPK P  A+ ++ +    KIK +HPG+SI+D+
Sbjct: 519 -QLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDL 577

Query: 121 AKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKK 180
           +KK GE+W  ++++ K  +++KA   +  YEK +  + G G+ +++K+   K +K  K K
Sbjct: 578 SKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYEG-GRGESSKRDKSKKKKKVKVK 636

Query: 181 EEDK 184
            E K
Sbjct: 637 MEKK 640


>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
          Length = 186

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 82  KMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDKHPYE 140
           K +  DP  P+ PP +F +F  +   ++K E+P  S+  VAK  G+MW+   + +KHPYE
Sbjct: 84  KRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPYE 143

Query: 141 KKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKA-EKCKKKK 180
           ++   L+ KY +++  +  + + +A KK  + A  +C+ K+
Sbjct: 144 QRVALLRAKYFEELELY--RKQCNARKKYRMSARNRCRGKR 182



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 13/48 (27%), Positives = 26/48 (54%)

Query: 115 LSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGK 162
           +   + ++K  E W  I++ +K  YE  A   K +Y++++  + GK K
Sbjct: 36  VGFKEFSRKCSEKWRSISKHEKAKYEALAKLDKARYQEEMMNYVGKRK 83


>gi|57232748 HMG2 like isoform 2 [Homo sapiens]
          Length = 112

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 82  KMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDKHPYE 140
           K +  DP  P+ PP +F +F  +   ++K E+P  S+  VAK  G+MW+   + +KHPYE
Sbjct: 10  KRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPYE 69

Query: 141 KKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKA-EKCKKKK 180
           ++   L+ KY +++  +  + + +A KK  + A  +C+ K+
Sbjct: 70  QRVALLRAKYFEELELY--RKQCNARKKYRMSARNRCRGKR 108


>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
          Length = 621

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 77  QRAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDD 135
           Q+A  K K +DPN P+ P  A+ +F  +    IK ++P  +  +V+K +  MW+ + E+ 
Sbjct: 209 QKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ 268

Query: 136 KHPYEKKAVKLKEKYEKDIAAF 157
           K  Y++K    K++Y K +AA+
Sbjct: 269 KQVYKRKTEAAKKEYLKALAAY 290


>gi|149408144 TOX high mobility group box family member 2 isoform a
           [Homo sapiens]
          Length = 506

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 5/97 (5%)

Query: 82  KMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDKHPYE 140
           K K +DPN P+ P  A+ +F  +    IK ++P  +  DV+K +  MW+ + E+ K  Y+
Sbjct: 237 KKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYK 296

Query: 141 KKAVKLKEKYEKDIAAFG----GKGKPDAAKKGAIKA 173
           +K    K++Y K +AA+      K  PD  +  + +A
Sbjct: 297 RKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQA 333


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.126    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,573,999
Number of Sequences: 37866
Number of extensions: 351815
Number of successful extensions: 1641
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 1411
Number of HSP's gapped (non-prelim): 220
length of query: 227
length of database: 18,247,518
effective HSP length: 99
effective length of query: 128
effective length of database: 14,498,784
effective search space: 1855844352
effective search space used: 1855844352
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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