Search of human proteins with 239757803

Search of human proteins with 239757803

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757803 PREDICTED: hypothetical protein [Homo sapiens]
         (367 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757803 PREDICTED: hypothetical protein [Homo sapiens]           751   0.0  
gi|239752315 PREDICTED: hypothetical protein XP_002348197 [Homo ...   751   0.0  
gi|239746822 PREDICTED: hypothetical protein XP_002343851 [Homo ...   664   0.0  
gi|116268103 zinc finger, FYVE domain containing 19 [Homo sapiens]     37   0.021
gi|65288071 tensin 3 [Homo sapiens]                                    33   0.31 
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    33   0.53 
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    33   0.53 
gi|38202209 methyl-CpG binding domain protein 5 [Homo sapiens]         33   0.53 
gi|8923040 CDKN2A interacting protein [Homo sapiens]                   32   0.69 
gi|134031945 SCO-spondin [Homo sapiens]                                32   0.69 
gi|38569471 MUF1 protein [Homo sapiens]                                32   1.2  
gi|185135971 poly(A)-binding protein, cytoplasmic 1-like [Homo s...    30   2.6  
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    30   2.6  
gi|239745938 PREDICTED: hypothetical protein [Homo sapiens]            30   3.4  
gi|167466177 cell division cycle protein 27 isoform 1 [Homo sapi...    30   3.4  
gi|167466175 cell division cycle protein 27 isoform 2 [Homo sapi...    30   3.4  
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]          30   4.5  
gi|95147555 microtubule-associated protein 1A [Homo sapiens]           30   4.5  
gi|57546899 myeloid/lymphoid or mixed-lineage leukemia transloca...    30   4.5  
gi|4557853 transcription factor SOX9 [Homo sapiens]                    29   5.8  
gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo sap...    29   5.8  
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]            29   5.8  
gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo sap...    29   5.8  
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ...    29   5.8  
gi|169165128 PREDICTED: hypothetical protein LOC401106 [Homo sap...    29   5.8  
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       29   5.8  
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         29   5.8  
gi|116256471 SNF1-like kinase [Homo sapiens]                           29   7.6  
gi|40068065 hypothetical protein LOC54058 [Homo sapiens]               29   7.6  
gi|150170732 hypothetical protein LOC374470 [Homo sapiens]             29   7.6  

>gi|239757803 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 367

 Score =  751 bits (1938), Expect = 0.0
 Identities = 367/367 (100%), Positives = 367/367 (100%)

Query: 1   MSSEGSRASRLTQDRAEMLVTGLPSCTTKRLALVSFPAAAEGGKAKVRVRAVPWEGWRAS 60
           MSSEGSRASRLTQDRAEMLVTGLPSCTTKRLALVSFPAAAEGGKAKVRVRAVPWEGWRAS
Sbjct: 1   MSSEGSRASRLTQDRAEMLVTGLPSCTTKRLALVSFPAAAEGGKAKVRVRAVPWEGWRAS 60

Query: 61  TQMQACCLPTCGHIKEEREDTATVITRPEQPARGIKGQSKDTACQLAGAPLHFLACGDVH 120
           TQMQACCLPTCGHIKEEREDTATVITRPEQPARGIKGQSKDTACQLAGAPLHFLACGDVH
Sbjct: 61  TQMQACCLPTCGHIKEEREDTATVITRPEQPARGIKGQSKDTACQLAGAPLHFLACGDVH 120

Query: 121 DMHVVLGVPHLWGECTDHHPASSQALLESDHSGAAVDATGWSLLESIHNRAVAGWKVQQS 180
           DMHVVLGVPHLWGECTDHHPASSQALLESDHSGAAVDATGWSLLESIHNRAVAGWKVQQS
Sbjct: 121 DMHVVLGVPHLWGECTDHHPASSQALLESDHSGAAVDATGWSLLESIHNRAVAGWKVQQS 180

Query: 181 SSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAG 240
           SSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAG
Sbjct: 181 SSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAG 240

Query: 241 TSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLPPKPQV 300
           TSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLPPKPQV
Sbjct: 241 TSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLPPKPQV 300

Query: 301 LPTQRWGVPSLGILPQQLAAPADILRPKLWKRWCAVRVVPAGSGCRAGSRHRTEGINQLG 360
           LPTQRWGVPSLGILPQQLAAPADILRPKLWKRWCAVRVVPAGSGCRAGSRHRTEGINQLG
Sbjct: 301 LPTQRWGVPSLGILPQQLAAPADILRPKLWKRWCAVRVVPAGSGCRAGSRHRTEGINQLG 360

Query: 361 GGGTAGE 367
           GGGTAGE
Sbjct: 361 GGGTAGE 367


>gi|239752315 PREDICTED: hypothetical protein XP_002348197 [Homo
           sapiens]
          Length = 367

 Score =  751 bits (1938), Expect = 0.0
 Identities = 367/367 (100%), Positives = 367/367 (100%)

Query: 1   MSSEGSRASRLTQDRAEMLVTGLPSCTTKRLALVSFPAAAEGGKAKVRVRAVPWEGWRAS 60
           MSSEGSRASRLTQDRAEMLVTGLPSCTTKRLALVSFPAAAEGGKAKVRVRAVPWEGWRAS
Sbjct: 1   MSSEGSRASRLTQDRAEMLVTGLPSCTTKRLALVSFPAAAEGGKAKVRVRAVPWEGWRAS 60

Query: 61  TQMQACCLPTCGHIKEEREDTATVITRPEQPARGIKGQSKDTACQLAGAPLHFLACGDVH 120
           TQMQACCLPTCGHIKEEREDTATVITRPEQPARGIKGQSKDTACQLAGAPLHFLACGDVH
Sbjct: 61  TQMQACCLPTCGHIKEEREDTATVITRPEQPARGIKGQSKDTACQLAGAPLHFLACGDVH 120

Query: 121 DMHVVLGVPHLWGECTDHHPASSQALLESDHSGAAVDATGWSLLESIHNRAVAGWKVQQS 180
           DMHVVLGVPHLWGECTDHHPASSQALLESDHSGAAVDATGWSLLESIHNRAVAGWKVQQS
Sbjct: 121 DMHVVLGVPHLWGECTDHHPASSQALLESDHSGAAVDATGWSLLESIHNRAVAGWKVQQS 180

Query: 181 SSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAG 240
           SSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAG
Sbjct: 181 SSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAG 240

Query: 241 TSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLPPKPQV 300
           TSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLPPKPQV
Sbjct: 241 TSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLPPKPQV 300

Query: 301 LPTQRWGVPSLGILPQQLAAPADILRPKLWKRWCAVRVVPAGSGCRAGSRHRTEGINQLG 360
           LPTQRWGVPSLGILPQQLAAPADILRPKLWKRWCAVRVVPAGSGCRAGSRHRTEGINQLG
Sbjct: 301 LPTQRWGVPSLGILPQQLAAPADILRPKLWKRWCAVRVVPAGSGCRAGSRHRTEGINQLG 360

Query: 361 GGGTAGE 367
           GGGTAGE
Sbjct: 361 GGGTAGE 367


>gi|239746822 PREDICTED: hypothetical protein XP_002343851 [Homo
           sapiens]
          Length = 371

 Score =  664 bits (1713), Expect = 0.0
 Identities = 337/375 (89%), Positives = 341/375 (90%), Gaps = 12/375 (3%)

Query: 1   MSSEGSRASRLTQDRAEMLVTGLPSCTTKRLALVSFPAAAEGGKAKVRVRAVPWEGWRAS 60
           MSSEGSRASRLTQDRAEMLVTGLPSCTTKRLALVSFPAAAEGGKAKVRVRAVPWEGWRAS
Sbjct: 1   MSSEGSRASRLTQDRAEMLVTGLPSCTTKRLALVSFPAAAEGGKAKVRVRAVPWEGWRAS 60

Query: 61  TQMQACCLPTCGHIKEEREDTATVITRPEQPARGIKGQSKDTACQLAGAPLHFLACGDVH 120
           TQMQACCLPTCGHIKEEREDTA VITRPEQPARGIKGQSKDTACQLAGAPLHFLACGDVH
Sbjct: 61  TQMQACCLPTCGHIKEEREDTAMVITRPEQPARGIKGQSKDTACQLAGAPLHFLACGDVH 120

Query: 121 DMHVVLGVPHLWGECTDHHPA--------SSQALLESDHSGAAVDATGWSLLESIHNRAV 172
           DMHVVLGVPHL    T  H          S Q+ LESD  G   D T  SL+  +    +
Sbjct: 121 DMHVVLGVPHLSPHYTPGHTRLSNVLPLLSDQSTLESDTVGPLTDQTRLSLIILL----L 176

Query: 173 AGWKVQQSSSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRST 232
            GWKVQQSSSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRST
Sbjct: 177 RGWKVQQSSSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRST 236

Query: 233 RSTVGGAGTSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQ 292
           RSTVGGAGTSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQ
Sbjct: 237 RSTVGGAGTSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQ 296

Query: 293 QLPPKPQVLPTQRWGVPSLGILPQQLAAPADILRPKLWKRWCAVRVVPAGSGCRAGSRHR 352
           QLPPKPQVLPTQRWGVPSLGILPQQLAAPADILRPKLWKRWCAVRVVPAGSGCRAGSRHR
Sbjct: 297 QLPPKPQVLPTQRWGVPSLGILPQQLAAPADILRPKLWKRWCAVRVVPAGSGCRAGSRHR 356

Query: 353 TEGINQLGGGGTAGE 367
           TEGINQLGGGGTAGE
Sbjct: 357 TEGINQLGGGGTAGE 371


>gi|116268103 zinc finger, FYVE domain containing 19 [Homo sapiens]
          Length = 471

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 20/153 (13%)

Query: 153 GAAVDATGWSLLESIHNRAVAGWKVQQSSSALSGSGISRMQRPSSEAQMRM--------- 203
           G++ +A+ WS  ++   R VA  + +Q  S     G++R  +  +E   R+         
Sbjct: 135 GSSANASKWSPPQNYKKR-VAALEAKQKPSTSQSQGLTRQDQMIAERLARLRQENKPKLV 193

Query: 204 VASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAGTSWHREMLPSR---PEDH-PQTH 259
            + +E++ R++  +D+ +   P       R        +    +LPS+   P  H P T 
Sbjct: 194 PSQAEIEARLAALKDERQGSIPSTQEMEARLA------ALQGRVLPSQTPQPAHHTPDTR 247

Query: 260 LHAVKSSAATADDAVAIGTSTAWLGEGPVALAQ 292
             A ++       A  +    +W G GP A  Q
Sbjct: 248 TQAQQTQDLLTQLAAEVAIDESWKGGGPAASLQ 280


>gi|65288071 tensin 3 [Homo sapiens]
          Length = 1445

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 180  SSSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGA 239
            SS  +S +G  + +  SS A+ + V SS       L   +         P  +  +   +
Sbjct: 926  SSCTISSNGPGQRRESSSSAERQWVESSPKPMVSLLGSGR---------PTGSPLSAEFS 976

Query: 240  GTSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLPPK 297
            GT     +L   P    Q   H+ + S A   D++A  +S A+LG G   +   LPP+
Sbjct: 977  GTRKDSPVLSCFPPSELQAPFHSHELSLAEPPDSLAPPSSQAFLGFGTAPVGSGLPPE 1034


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
          Length = 2462

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 178  QQSSSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKS--------ETPRVWP 229
            + SSS LS  G + + +P++ +        + D     +R++ KS        E   +W 
Sbjct: 1762 RHSSSPLSPGGPTHLTKPTTTSSSER--ERDRDRERDRDREREKSILTSTTTVEHAPIWR 1819

Query: 230  RSTRSTVGGAGTSWHREMLPSRPEDHPQTHLHA 262
              T  + G +G+S       SRP  H   H H+
Sbjct: 1820 PGTEQSSGSSGSSGGGGGSSSRPASHSHAHQHS 1852


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
          Length = 2524

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 178  QQSSSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKS--------ETPRVWP 229
            + SSS LS  G + + +P++ +        + D     +R++ KS        E   +W 
Sbjct: 1778 RHSSSPLSPGGPTHLTKPTTTSSSER--ERDRDRERDRDREREKSILTSTTTVEHAPIWR 1835

Query: 230  RSTRSTVGGAGTSWHREMLPSRPEDHPQTHLHA 262
              T  + G +G+S       SRP  H   H H+
Sbjct: 1836 PGTEQSSGSSGSSGGGGGSSSRPASHSHAHQHS 1868


>gi|38202209 methyl-CpG binding domain protein 5 [Homo sapiens]
          Length = 1494

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)

Query: 184 LSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAGTSW 243
           + G+GI R++     ++    +S   +  M     QA S   +V PRS RST+G      
Sbjct: 445 MMGTGIGRIEASPQRSRSSSTSSDHGNFMMPPVGPQATSSGIKVPPRSPRSTIGSP---- 500

Query: 244 HREMLPSRPEDHPQTH 259
            R  +PS P      H
Sbjct: 501 -RPSMPSSPSTKSDGH 515


>gi|8923040 CDKN2A interacting protein [Homo sapiens]
          Length = 580

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 29/163 (17%)

Query: 138 HHPASSQALLESD---HSGAAVDATGWSLLESIHNRAVAGWKVQQSSSA-------LSGS 187
           H  AS  +LL+S    H   + D+   S   S    A+ G     S S+       L  S
Sbjct: 239 HGSASFVSLLKSSVNSHMTQSTDSRQQS--GSPKKSALEGSSASASQSSSEIEVPLLGSS 296

Query: 188 GISRMQ------RPSSEAQ---MRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGG 238
           G S ++      +PSSE     +    SSE     S+ ++ + S T  + P+S+ ST   
Sbjct: 297 GSSEVELPLLSSKPSSETASSGLTSKTSSEASVSSSVAKNSSSSGTSLLTPKSSSST--- 353

Query: 239 AGTSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTA 281
                +  +L S+        L A KSS+ T+   V+  TS A
Sbjct: 354 -----NTSLLTSKSTSQVAASLLASKSSSQTSGSLVSKSTSLA 391


>gi|134031945 SCO-spondin [Homo sapiens]
          Length = 5147

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 21/90 (23%), Positives = 31/90 (34%), Gaps = 12/90 (13%)

Query: 53   PWEGWRASTQMQACCLPTCGHIKEEREDTATVITRPEQPARGIKGQSKDTACQLAGAPLH 112
            PW  W         C  +CG +         V+T P    +G +G  +D  C     P  
Sbjct: 3816 PWSPWGP-------CSRSCGGLGTRTRSRQCVLTMPTLSGQGCRGPRQDLECPSPDCP-- 3866

Query: 113  FLACGDVHDMHVVLGVPHLWGECTDHHPAS 142
                 +   +  V G+P  WG  +   P S
Sbjct: 3867 ---GAEGSTVEPVTGLPGGWGPWSSWSPCS 3893


>gi|38569471 MUF1 protein [Homo sapiens]
          Length = 812

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 186 GSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSE-TPRVWPRSTRSTVGGAGTSWH 244
           GS +   +RP  +A  R  A+     R S  +   ++    RV  RST+ ++   GT   
Sbjct: 280 GSLLLGSRRPRRDAAERCAAALMASRRKSEAKQMPRAAPATRVTRRSTQESLTAGGTDLK 339

Query: 245 REMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLPPKP 298
           RE+ P            +  + AAT+    +  +ST+     P + A Q  PKP
Sbjct: 340 RELHPPATSHEAPGTKRSPSAPAATS----SASSSTSSYKRAPASSAPQ--PKP 387


>gi|185135971 poly(A)-binding protein, cytoplasmic 1-like [Homo
           sapiens]
          Length = 614

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 18/47 (38%), Positives = 22/47 (46%)

Query: 66  CCLPTCGHIKEEREDTATVITRPEQPARGIKGQSKDTACQLAGAPLH 112
           CC P    +  +    A    R ++PA  I GQ   TA  LA APLH
Sbjct: 496 CCTPGRPLLPCKCSSAAHSTYRVQEPAVHIPGQEPLTASMLAAAPLH 542


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 33/116 (28%), Positives = 44/116 (37%), Gaps = 7/116 (6%)

Query: 239 AGTSWHREMLPSRPEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLPPKP 298
           A  + H  + P  PE        A+ +   +   A A G   A   EG    A + PP  
Sbjct: 35  ASAAHHHHLAPRTPEVRAAA-AGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAG 93

Query: 299 QVLP----TQRWGVPS--LGILPQQLAAPADILRPKLWKRWCAVRVVPAGSGCRAG 348
           +  P     QR G PS    ++P   A PA  LRP       +   VPA +   AG
Sbjct: 94  RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAG 149


>gi|239745938 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 336

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 27/87 (31%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 284 GEGPVALAQQLPPKPQVLPTQRWGVPSLGILPQQLAAPADILRPKLWK----RWCAVRVV 339
           G G VA A    P    LP  RW +     LP   AAP        W+    R       
Sbjct: 146 GPGQVAAAAAAAPASSPLPPGRWCLGDQRRLPPATAAPPWASSATAWRLPQPRRRRRPTC 205

Query: 340 PAGSGCRAGSRHRTEGINQLGGGGTAG 366
           P  S CR  S      +   GGG  AG
Sbjct: 206 PCCSRCRELSPPMGPDLGGGGGGAGAG 232


>gi|167466177 cell division cycle protein 27 isoform 1 [Homo
           sapiens]
          Length = 830

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 266 SAATADDAVAIGTSTAWLGEGPVALAQQLPPKPQVLPTQRWG-------VPSLGILPQQL 318
           S+ +  D+  I   T  LG G   L++Q+  KP+   +   G        PS GILP + 
Sbjct: 230 SSVSYIDSAVISPDTVPLGTGTSILSKQVQNKPKTGRSLLGGPAALSPLTPSFGILPLET 289

Query: 319 AAPAD 323
            +P D
Sbjct: 290 PSPGD 294


>gi|167466175 cell division cycle protein 27 isoform 2 [Homo
           sapiens]
          Length = 824

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 266 SAATADDAVAIGTSTAWLGEGPVALAQQLPPKPQVLPTQRWG-------VPSLGILPQQL 318
           S+ +  D+  I   T  LG G   L++Q+  KP+   +   G        PS GILP + 
Sbjct: 230 SSVSYIDSAVISPDTVPLGTGTSILSKQVQNKPKTGRSLLGGPAALSPLTPSFGILPLET 289

Query: 319 AAPAD 323
            +P D
Sbjct: 290 PSPGD 294


>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
          Length = 715

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 178 QQSSSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVG 237
           +QS S        R + PS E + R   SS      S ERD ++S +P      +R    
Sbjct: 558 RQSRSPSKERDRRRWRSPSKERERRQSRSS------SEERDHSRSRSPNKQSGYSRPRAS 611

Query: 238 GAGTSWHREMLPSRPEDHPQTHLHAVKS 265
               +  R   PS+  +H Q+   + +S
Sbjct: 612 SKEKAHSRSRTPSKEGNHSQSRTSSKES 639


>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
          Length = 2803

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 9/107 (8%)

Query: 208 EVDTRMSLERDQAKSETPRVWPRSTRSTVGGAGTSWHREMLPSRPEDHPQTHLHAVKSSA 267
           ++D   ++  ++  S  P+  P + + TV     S HRE++ S PED  Q      +   
Sbjct: 485 KIDRSRAIRGEKELSSEPQT-PPAQKGTVPLPTISGHRELVLSSPEDLTQDFEEMKREER 543

Query: 268 ATADDAVAIGTSTAWLGEGPVAL--AQQLPPKPQVLPTQRWGVPSLG 312
           A   +    G     LG+ P  L  A++ PP   +  T    VP LG
Sbjct: 544 ALLAEQRDTG-----LGDKPFPLDTAEEGPPSTAIQGTPP-SVPGLG 584


>gi|57546899 myeloid/lymphoid or mixed-lineage leukemia translocated
           to, 10 isoform b [Homo sapiens]
          Length = 1011

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 5/104 (4%)

Query: 140 PASSQALLESDHSGAAVDATGWSLLESIHNRAVAGWKVQQS-SSALSGSGISRMQRPSSE 198
           P  S+  ++  H GA    T   LL +IHN       V  S  + +SGSG S    P S 
Sbjct: 537 PVGSEISMQYRHDGACPTTTFSELLNAIHNGIYNSNDVAVSFPNVVSGSGSS---TPVSS 593

Query: 199 AQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAGTS 242
           + +   +S  +    +L      S  P V   +  +T+ G+  S
Sbjct: 594 SHLPQQSSGHLQQVGALSPSAVSSAAPAV-ATTQANTLSGSSLS 636


>gi|4557853 transcription factor SOX9 [Homo sapiens]
          Length = 509

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 9/76 (11%)

Query: 249 PSRPEDHPQ---THLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLPPKPQVLPTQR 305
           P  P  H Q   T  + + S+AAT   A  +  S       P     Q PP PQ  P Q 
Sbjct: 304 PGVPATHGQVTYTGSYGISSTAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQA-PPQP 362

Query: 306 WGVPSLGILPQQLAAP 321
              P     PQQ AAP
Sbjct: 363 QAAP-----PQQPAAP 373


>gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo
           sapiens]
          Length = 297

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 286 GPVALAQQLPPKPQVLPTQRWGVPSLGILPQQLAAPADI-LRPKLWKRWCAVRVVPAGSG 344
           GP A  +Q    PQ      W  P+L         P D  LRP+   R  A R V     
Sbjct: 55  GPHARPRQAARPPQAFAPTAWA-PALASPAPDTPRPRDAQLRPEKAGRDLA-RDVENPPP 112

Query: 345 CRAGSRHRTEGINQLGGGGTAG 366
            R G+R R     Q GGG  AG
Sbjct: 113 LRGGARSRCGESRQAGGGARAG 134


>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 650

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 185 SGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAGTSWH 244
           +G+  S  +R S   +++   + + DTR+      A+   PR  P S+R   G AG    
Sbjct: 165 AGAASSLSERSSERVELQS-DTDDSDTRV------AEGARPRPGPTSSRRPWGRAGGLRP 217

Query: 245 REMLPSRPEDHPQTHLHAVKSSAATA 270
           R   P+R +  P +       SAA A
Sbjct: 218 RGKRPARGKKRPSSQRRCSSPSAARA 243


>gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo
           sapiens]
          Length = 297

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 286 GPVALAQQLPPKPQVLPTQRWGVPSLGILPQQLAAPADI-LRPKLWKRWCAVRVVPAGSG 344
           GP A  +Q    PQ      W  P+L         P D  LRP+   R  A R V     
Sbjct: 55  GPHARPRQAARPPQAFAPTAWA-PALASPAPDTPRPRDAQLRPEKAGRDLA-RDVENPPP 112

Query: 345 CRAGSRHRTEGINQLGGGGTAG 366
            R G+R R     Q GGG  AG
Sbjct: 113 LRGGARSRCGESRQAGGGARAG 134


>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
           sapiens]
          Length = 725

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 185 SGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAGTSWH 244
           +G+  S  +R S   +++   + + DTR+      A+   PR  P S+R   G AG    
Sbjct: 165 AGAASSLSERSSERVELQS-DTDDSDTRV------AEGARPRPGPTSSRRPWGRAGGLRP 217

Query: 245 REMLPSRPEDHPQTHLHAVKSSAATA 270
           R   P+R +  P +       SAA A
Sbjct: 218 RGKRPARGKKRPSSQRRCSSPSAARA 243


>gi|169165128 PREDICTED: hypothetical protein LOC401106 [Homo
           sapiens]
          Length = 297

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 286 GPVALAQQLPPKPQVLPTQRWGVPSLGILPQQLAAPADI-LRPKLWKRWCAVRVVPAGSG 344
           GP A  +Q    PQ      W  P+L         P D  LRP+   R  A R V     
Sbjct: 55  GPHARPRQAARPPQAFAPTAWA-PALASPAPDTPRPRDAQLRPEKAGRDLA-RDVENPPP 112

Query: 345 CRAGSRHRTEGINQLGGGGTAG 366
            R G+R R     Q GGG  AG
Sbjct: 113 LRGGARSRCGESRQAGGGARAG 134


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 252 PEDHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQ-LPPKPQVLPTQRWGVPS 310
           P D P +  H V++  AT          T  L   PV   Q  LPP+P VLP Q    P 
Sbjct: 921 PTDVPPSPHHTVQNMRATPPQPALPPQPT--LPPQPVLPPQPTLPPQP-VLPPQPTRPPQ 977

Query: 311 LGILPQQLAAPADILRPK 328
             + PQ +  P  +L P+
Sbjct: 978 PVLPPQPMLPPQPVLPPQ 995


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)

Query: 180 SSSALSGSGISRMQRPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVW-PRSTRSTVGG 238
           SS ++SGS     ++P +        S   +   ++   +AKS TP    PR++    GG
Sbjct: 749 SSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGG 808

Query: 239 AGTSWHREMLPSRPEDHPQTHLH----AVKSSAATADDAVAIGTSTAWLG-EGPVA 289
                 ++    + + H +   H    AV ++AA A    AI  +T  L  E PVA
Sbjct: 809 KKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQEEPVA 864


>gi|116256471 SNF1-like kinase [Homo sapiens]
          Length = 783

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 4/30 (13%)

Query: 138 HHPASSQALLESDHSGAAVDATGWSLLESI 167
           H PA S  L    H GAA    GWSLLE +
Sbjct: 629 HAPAQSPGL----HGGAAGSREGWSLLEEV 654


>gi|40068065 hypothetical protein LOC54058 [Homo sapiens]
          Length = 322

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 21/122 (17%)

Query: 194 RPSSEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAGTSWHREMLPSRPE 253
           RP    Q  +    ++  R+  +    +    + W   +R  +G A            P 
Sbjct: 128 RPDDALQTALKRRRDLLQRLREQHLLDELSRAQAWSGPSRGALGSA-----------LPP 176

Query: 254 DHPQTHLHAVKSSAATADDAVAIGTSTAWLGEGPVALAQQLP--------PKPQVLPTQR 305
           + P T +    S +  A D   I   T  + + P  + QQLP        P PQ  PTQR
Sbjct: 177 ELPPTGILPTASPSPLAPDPPRIILPT--VPQPPATIIQQLPQQPLIAQIPPPQAFPTQR 234

Query: 306 WG 307
            G
Sbjct: 235 SG 236


>gi|150170732 hypothetical protein LOC374470 [Homo sapiens]
          Length = 360

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 43/178 (24%), Positives = 66/178 (37%), Gaps = 27/178 (15%)

Query: 136 TDHHPASSQALLESDHSGAAVDATGW--SLLESIHNRAVAGWKVQQSSSALSGSGISRMQ 193
           TD  P    A  E++          W  S LE +  +      V        G  ISR  
Sbjct: 137 TDEAPLIFTARGETEERARGAPKQAWNSSFLEQLVKKPNWAHSVNPVHLEAQGIHISRHT 196

Query: 194 RPS----SEAQMRMVASSEVDTRMSLERDQAKSETPRVWPRSTRSTVGGAGTSWHREMLP 249
           RP     S  +    +++   T + L R   +S+TP     + +ST             P
Sbjct: 197 RPKGQPLSSPKKNSGSAARPSTAIGLCR---RSQTPG----ALQSTG------------P 237

Query: 250 SRPEDHPQTHLHAVKSSAATADDAVA--IGTSTAWLGEGPVALAQQLPPKPQVLPTQR 305
           S  E  P+  +     + A  DD  +  +G S   +G+G VA+A ++ PK    P  R
Sbjct: 238 SNTELEPEERMAVPAGAQAHPDDIQSRLLGASGNPVGKGAVAMAPEMLPKHPHTPRDR 295


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.128    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,138,834
Number of Sequences: 37866
Number of extensions: 730135
Number of successful extensions: 2363
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2337
Number of HSP's gapped (non-prelim): 63
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.