LOC100293231 23100

Name: LOC100293231	Sequence: fasta or formatted (959aa)		NCBI GI: 239757138
Description: PREDICTED: hypothetical protein, partial		Referenced in: Mucins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.9 28 2 C cysteine 1.6 15 1 D aspartate 5.3 51 1 E glutamate 4.0 38 2 F phenylalanine 4.0 38 1 G glycine 7.1 68 1 H histidine 2.8 27 2 I isoleucine 3.4 33 2 K lysine 3.2 31 2 L leucine 12.7 122 2 M methionine 1.5 14 1 N asparagine 4.9 47 2 P proline 6.7 64 2 Q glutamine 4.7 45 3 R arginine 5.6 54 3 S serine 8.8 84 4 T threonine 10.5 101 3 V valine 5.4 52 2 W tryptophan 0.6 6 1 Y tyrosine 4.3 41 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein, partial MUC16 0.660 mucin 16 LOC730036 0.007 PREDICTED: hypothetical protein TMPRSS11F 0.007 transmembrane protease, serine 11F LOC730036 0.006 PREDICTED: similar to taste receptor protein 1 [Hom... LOC730036 0.006 PREDICTED: similar to taste receptor protein 1 [Hom... LOC100294420 0.006 PREDICTED: similar to mucin 2 MUC1 0.005 mucin 1 isoform 1 precursor LMAN2 0.005 lectin, mannose-binding 2 precursor MUC2 0.005 mucin 2 precursor MUC12 0.005 PREDICTED: mucin 12 TMPRSS11E 0.004 transmembrane protease, serine 11E TMPRSS11E2 0.004 transmembrane protease, serine 11E2 AGRN 0.004 agrin MDC1 0.004 mediator of DNA-damage checkpoint 1 LOC100130716 0.004 PREDICTED: similar to mucin 11 LOX 0.004 lysyl oxidase preproprotein COL3A1 0.003 collagen type III alpha 1 preproprotein PCLO 0.003 piccolo isoform 2 PCLO 0.003 piccolo isoform 1 SLAIN2 0.003 SLAIN motif family, member 2 SYT8 0.003 synaptotagmin VIII HIVEP3 0.003 human immunodeficiency virus type I enhancer bindin... HIVEP3 0.003 human immunodeficiency virus type I enhancer bindin... MUC3A 0.003 PREDICTED: mucin 3A, intestinal COL4A5 0.003 type IV collagen alpha 5 isoform 2 precursor ZNF236 0.003 zinc finger protein 236 COL4A5 0.003 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.003 type IV collagen alpha 5 isoform 3 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.