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Search of human proteins with 119943093
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|119943093 glycogenin 2 isoform a [Homo sapiens]
(470 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|119943093 glycogenin 2 isoform a [Homo sapiens] 956 0.0
gi|119964690 glycogenin 2 isoform b [Homo sapiens] 955 0.0
gi|20127457 glycogenin 1 [Homo sapiens] 370 e-102
gi|50345997 E1A binding protein p300 [Homo sapiens] 39 0.013
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 39 0.013
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 37 0.039
gi|191252814 RIMS binding protein 3B [Homo sapiens] 36 0.066
gi|191252806 RIMS binding protein 3C [Homo sapiens] 36 0.066
gi|153792195 DKFZP434H0735 protein [Homo sapiens] 36 0.066
gi|42734325 wings apart-like homolog [Homo sapiens] 36 0.066
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.086
gi|170763517 transforming, acidic coiled-coil containing protein... 35 0.15
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 35 0.15
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 35 0.15
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 34 0.25
gi|158303333 synaptopodin isoform B [Homo sapiens] 34 0.25
gi|40353727 synaptopodin isoform A [Homo sapiens] 34 0.25
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 34 0.25
gi|239746922 PREDICTED: similar to cancer/testis antigen family ... 34 0.33
gi|119943102 CREB binding protein isoform b [Homo sapiens] 34 0.33
gi|119943104 CREB binding protein isoform a [Homo sapiens] 34 0.33
gi|24307965 UBX domain containing 2 [Homo sapiens] 34 0.33
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 33 0.43
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 33 0.43
gi|24797153 faciogenital dysplasia protein [Homo sapiens] 33 0.43
gi|195947361 histidine acid phosphatase domain containing 2A iso... 33 0.43
gi|195947359 histidine acid phosphatase domain containing 2A iso... 33 0.43
gi|66932994 histidine acid phosphatase domain containing 2A isof... 33 0.43
gi|66932992 histidine acid phosphatase domain containing 2A isof... 33 0.43
gi|83367077 mucin 16 [Homo sapiens] 33 0.56
>gi|119943093 glycogenin 2 isoform a [Homo sapiens]
Length = 470
Score = 956 bits (2471), Expect = 0.0
Identities = 470/470 (100%), Positives = 470/470 (100%)
Query: 1 MSVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEV 60
MSVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEV
Sbjct: 1 MSVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEV 60
Query: 61 IEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRG 120
IEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRG
Sbjct: 61 IEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRG 120
Query: 121 EFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTD 180
EFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTD
Sbjct: 121 EFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTD 180
Query: 181 IHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKPWNYKYNPQSGSVLEQGSAS 240
IHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKPWNYKYNPQSGSVLEQGSAS
Sbjct: 181 IHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKPWNYKYNPQSGSVLEQGSAS 240
Query: 241 SSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASPGHTLCHSDVGGPCADSASGVGEPC 300
SSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASPGHTLCHSDVGGPCADSASGVGEPC
Sbjct: 241 SSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASPGHTLCHSDVGGPCADSASGVGEPC 300
Query: 301 ENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVIT 360
ENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVIT
Sbjct: 301 ENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVIT 360
Query: 361 CDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALRDPSLQDALEVDL 420
CDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALRDPSLQDALEVDL
Sbjct: 361 CDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALRDPSLQDALEVDL 420
Query: 421 AVSVSQISIEEKVKELSPEEERRKWEEGRIDYMGKDAFARIQEKLDRFLQ 470
AVSVSQISIEEKVKELSPEEERRKWEEGRIDYMGKDAFARIQEKLDRFLQ
Sbjct: 421 AVSVSQISIEEKVKELSPEEERRKWEEGRIDYMGKDAFARIQEKLDRFLQ 470
>gi|119964690 glycogenin 2 isoform b [Homo sapiens]
Length = 501
Score = 955 bits (2468), Expect = 0.0
Identities = 469/470 (99%), Positives = 470/470 (100%)
Query: 1 MSVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEV 60
M+VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEV
Sbjct: 32 MTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEV 91
Query: 61 IEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRG 120
IEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRG
Sbjct: 92 IEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRG 151
Query: 121 EFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTD 180
EFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTD
Sbjct: 152 EFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTD 211
Query: 181 IHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKPWNYKYNPQSGSVLEQGSAS 240
IHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKPWNYKYNPQSGSVLEQGSAS
Sbjct: 212 IHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKPWNYKYNPQSGSVLEQGSAS 271
Query: 241 SSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASPGHTLCHSDVGGPCADSASGVGEPC 300
SSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASPGHTLCHSDVGGPCADSASGVGEPC
Sbjct: 272 SSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASPGHTLCHSDVGGPCADSASGVGEPC 331
Query: 301 ENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVIT 360
ENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVIT
Sbjct: 332 ENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVIT 391
Query: 361 CDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALRDPSLQDALEVDL 420
CDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALRDPSLQDALEVDL
Sbjct: 392 CDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALRDPSLQDALEVDL 451
Query: 421 AVSVSQISIEEKVKELSPEEERRKWEEGRIDYMGKDAFARIQEKLDRFLQ 470
AVSVSQISIEEKVKELSPEEERRKWEEGRIDYMGKDAFARIQEKLDRFLQ
Sbjct: 452 AVSVSQISIEEKVKELSPEEERRKWEEGRIDYMGKDAFARIQEKLDRFLQ 501
>gi|20127457 glycogenin 1 [Homo sapiens]
Length = 350
Score = 370 bits (950), Expect = e-102
Identities = 174/261 (66%), Positives = 210/261 (80%), Gaps = 1/261 (0%)
Query: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
+TDQAFVTL TND Y +GALVLG SL++HR TR+LVVL TPQVS +R +L VFDEVI
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 63 VNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEF 122
V+++DS D HL +KRPELG+TLTKLHCW+LT YSKCVF+DADTLVL+N+D+LFDR E
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREEL 120
Query: 123 SAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIH 182
SAAPDPGWPDCFNSGVFV+QPS+ T+ LL A E GSFDG DQG+LN+FF +W+TTDI
Sbjct: 121 SAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIR 180
Query: 183 KHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKPWNYKYNPQSGSVLEQGSASSS 242
KHLPFIYNLSS ++Y+Y PAFK FG+SAKVVHFLG +KPWNY Y+P++ SV + +
Sbjct: 181 KHLPFIYNLSSISIYSYLPAFKVFGASAKVVHFLGRVKPWNYTYDPKTKSVKSEAHDPNM 240
Query: 243 QHQAAFLHLWWTVYQNNVLPL 263
H FL LWW ++ NVLPL
Sbjct: 241 TH-PEFLILWWNIFTTNVLPL 260
Score = 47.0 bits (110), Expect = 4e-05
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 419 DLAVSVSQISIEEKVKELSP----EEERRKWEEGRIDYMGKDAFARIQEKLDRFLQ 470
D++ ++S +S+ E P EE + +WE+G+ DYMG D+F I+ KLD +LQ
Sbjct: 295 DVSGAISHLSLGEIPAMAQPFVSSEERKERWEQGQADYMGADSFDNIKRKLDTYLQ 350
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 38.5 bits (88), Expect = 0.013
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 298 EPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDM--IACPETET 355
+P + +A VP +PL QPA L +P ++ +S P S ++ A E +
Sbjct: 913 QPRSQQSTAASVPTPTAPLLPPQPATPLSQPAVSIEGQVSNPPSTSSTEVNSQAIAEKQP 972
Query: 356 PAVITCD-PLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALRDPSLQD 414
+ + + P+PAD T+ E I + + + S ET E S EL E +++ Q
Sbjct: 973 SQEVKMEAKMEVDQPEPAD-TQPEDISESKVEDCKMESTETEERSTELKTE-IKEEEDQP 1030
Query: 415 ALEVDLAVSVSQISIEEKVKELSPEEERR 443
+ A S + K K PEE R+
Sbjct: 1031 STS---ATQSSPAPGQSKKKIFKPEELRQ 1056
Score = 33.9 bits (76), Expect = 0.33
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 349 ACPETE-TPAVITCDPLSQPSPQPADFTE----------TETILQPANKVESVSSEETFE 397
ACP +E + C P Q P+P E +E I+ + ++E+
Sbjct: 1437 ACPPSEGDDYIFHCHPPDQKIPKPKRLQEWYKKMLDKAVSERIVHDYKDIFKQATEDRLT 1496
Query: 398 PSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEEERRKWEE 447
++ELP E D +V +EE +KEL EEE RK EE
Sbjct: 1497 SAKELPY-----------FEGDFWPNV----LEESIKELEQEEEERKREE 1531
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 38.5 bits (88), Expect = 0.013
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 12/151 (7%)
Query: 290 ADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIA 349
A +A G P + P+ P P P P ++ E P ++
Sbjct: 5 AAAAQGTAPPQDGEQPAES-PEPPPPWPPPPPPPAPPPAPPLLSEASPEPIPEPCPELAP 63
Query: 350 CPETETPAVITCDPLSQPSPQPADFTETETILQPANK-VESVSSEETFEPSQELPAEALR 408
P E + + ++P+P+PA +E +PA + ++E EP+ E E+
Sbjct: 64 GPCPEATSESATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEPATESAP 123
Query: 409 DPSLQDALEVDLAVSVSQISIEEKVKELSPE 439
+P+ + ALE S+ E EL+PE
Sbjct: 124 EPTPEPALE----------SVPEPAPELTPE 144
Score = 34.3 bits (77), Expect = 0.25
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Query: 292 SASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACP 351
S + EPC P PC P +++ A T++ E P + + P
Sbjct: 50 SPEPIPEPCPELAPG---PC---PEATSESA------TELYTEPTPEPATEPASEPAPEP 97
Query: 352 ETETPAVITCDPLSQPSPQPADFTETETILQPA-NKVESVSSEETFEPSQELPAEALRDP 410
TE +P +P+P+PA + E +PA V + E T E + EL E +P
Sbjct: 98 ATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAPELAPEPTPEP 157
Query: 411 SLQDALE 417
+ A E
Sbjct: 158 VTELAPE 164
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 37.0 bits (84), Expect = 0.039
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 370 QPADFTETETILQPANKVESVSSEETFEPSQ--ELPAEALRDPSLQDALEVDLAVSVSQI 427
Q A E E ILQ +++ + E E + EL A+A +D ++D E+D +++
Sbjct: 614 QEAKEREKERILQEHEQIKKKTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAK- 672
Query: 428 SIEEKVKELSPEEERRKWEEGRIDY 452
+E+ KE +ER K +E +IDY
Sbjct: 673 QVEQLEKEKKELQERLKNQEKKIDY 697
>gi|191252814 RIMS binding protein 3B [Homo sapiens]
Length = 1639
Score = 36.2 bits (82), Expect = 0.066
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 311 CANSPLGS-NQPAQGL----PEPTQIVDETLSLPEGRRSEDMIACPETETPAVITCDPLS 365
C++SP G + A L P ++ +D T SLP+ +SE+ + P+T TP P
Sbjct: 270 CSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPP 329
Query: 366 QPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEAL 407
P P P P + +S+ E S+ P E L
Sbjct: 330 SPLPPP----------PPPSAHRKLSNPRGGEGSESQPCEVL 361
>gi|191252806 RIMS binding protein 3C [Homo sapiens]
Length = 1639
Score = 36.2 bits (82), Expect = 0.066
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 311 CANSPLGS-NQPAQGL----PEPTQIVDETLSLPEGRRSEDMIACPETETPAVITCDPLS 365
C++SP G + A L P ++ +D T SLP+ +SE+ + P+T TP P
Sbjct: 270 CSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPP 329
Query: 366 QPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEAL 407
P P P P + +S+ E S+ P E L
Sbjct: 330 SPLPPP----------PPPSAHRKLSNPRGGEGSESQPCEVL 361
>gi|153792195 DKFZP434H0735 protein [Homo sapiens]
Length = 1639
Score = 36.2 bits (82), Expect = 0.066
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 311 CANSPLGS-NQPAQGL----PEPTQIVDETLSLPEGRRSEDMIACPETETPAVITCDPLS 365
C++SP G + A L P ++ +D T SLP+ +SE+ + P+T TP P
Sbjct: 270 CSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPP 329
Query: 366 QPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEAL 407
P P P P + +S+ E S+ P E L
Sbjct: 330 SPLPPP----------PPPSAHRKLSNPRGGEGSESQPCEVL 361
>gi|42734325 wings apart-like homolog [Homo sapiens]
Length = 1190
Score = 36.2 bits (82), Expect = 0.066
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 316 LGSNQP-----AQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVITCDPLSQPSPQ 370
LG +P Q +P+ ++ +E+ P G S+D ++ A + C S+ S +
Sbjct: 44 LGQKRPNFKPDIQEIPKKPKVEEESTGDPFGFDSDDESLPVSSKNLAQVKCSSYSE-SSE 102
Query: 371 PADFTETETILQPANKVESVSSEETFEPSQELPAEAL---RDPSLQDALEVDLAV-SVSQ 426
A E ++L+ +K+ V E+T + P E ++ S +E D ++ S ++
Sbjct: 103 AAQLEEVTSVLEANSKISHVVVEDTVVSDKCFPLEDTLLGKEKSTNRIVEDDASISSCNK 162
Query: 427 ISIEEKVKELSPEEER 442
+ +KV+ E E+
Sbjct: 163 LITSDKVENFHEEHEK 178
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.8 bits (81), Expect = 0.086
Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 4/114 (3%)
Query: 304 TPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACPETETP----AVI 359
+PSA P P + P Q P P + S R ++A P + P A +
Sbjct: 717 SPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASL 776
Query: 360 TCDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALRDPSLQ 413
PL++P PQ T + + S + F PS LP L P Q
Sbjct: 777 PMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ 830
Score = 32.3 bits (72), Expect = 0.95
Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 3/123 (2%)
Query: 288 PCADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDM 347
P + + P ++PS P + L S Q L PT + R+++
Sbjct: 381 PSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQAS 440
Query: 348 IACPETETPAVITCDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEAL 407
+ P PL P PA +T L PA V +SS T P Q L + A
Sbjct: 441 LTSPSRPASTPPDSPPLQAPLSLPAS-PPLQTSLSPA--VSPLSSPLTIHPLQALSSLAS 497
Query: 408 RDP 410
P
Sbjct: 498 HSP 500
Score = 31.2 bits (69), Expect = 2.1
Identities = 29/118 (24%), Positives = 40/118 (33%), Gaps = 6/118 (5%)
Query: 299 PCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACP---ETET 355
P E + A P P ++ P QGLP P L+ P + + P
Sbjct: 580 PPETPSSIATPPPQAPPALASPPLQGLPSPPL---SPLATPPPQAPPXLALPPLQAPPSP 636
Query: 356 PAVITCDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALRDPSLQ 413
PA PL+ PSPQ + + P + S + F P P P Q
Sbjct: 637 PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQ 694
>gi|170763517 transforming, acidic coiled-coil containing protein 1
isoform 1 [Homo sapiens]
Length = 805
Score = 35.0 bits (79), Expect = 0.15
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 323 QGLPEPTQIVDETLSLPEGRRSEDMIACPETETPA----VITCDP---LSQPSPQPADFT 375
+G PE ET SL SE PE ETP +CDP L+ P + +
Sbjct: 36 EGDPEEEDSQAETKSLSFSSDSEGNFETPEAETPIRSPFKESCDPSLGLAGPGAKSQESQ 95
Query: 376 ETETILQPANKVESVSSEETFEPSQ-ELPAEALRDPSLQDALE 417
E + L A VE SS+ +PS+ E+P +A+ S+++ E
Sbjct: 96 EADEQL-VAEVVEKCSSKTCSKPSENEVPQQAIDSHSVKNFRE 137
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 35.0 bits (79), Expect = 0.15
Identities = 42/146 (28%), Positives = 57/146 (39%), Gaps = 27/146 (18%)
Query: 300 CENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVI 359
C P+ G P ++ GS +P P P Q P GRR D + P E PA
Sbjct: 14 CRQRRPAPG-PAVDASGGSAEP----PPPLQ--------PPGRRDLDEVEAPGPEEPARA 60
Query: 360 T-----CDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALRDPSLQD 414
P P P PAD T QP + SV+ EE+ E A S
Sbjct: 61 VPAPSGLPPPPPPLPAPADQT------QPPHGEASVAGEESTAGIPEAAPAAGEASSAAA 114
Query: 415 ALEVDLAV---SVSQISIEEKVKELS 437
A V L + +VS ++ +++LS
Sbjct: 115 AAAVLLMLDLCAVSNAALARVLRQLS 140
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 35.0 bits (79), Expect = 0.15
Identities = 43/156 (27%), Positives = 59/156 (37%), Gaps = 13/156 (8%)
Query: 290 ADSASGVGEP---CENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSED 346
+D A G+ P E S GV + G Q A+G +P E + PE
Sbjct: 1829 SDGAEGIEAPEAEGEAQPESEGVEAPEAE-GDAQEAEGEAQPES---EDVEAPEAEGE-- 1882
Query: 347 MIACPETETPAVITCDPLSQPSPQPADFTETETILQPANK-VESVSSEETFEPSQELPAE 405
A PE+E + QP + A+ E E QP + VE++ +E EP E AE
Sbjct: 1883 --AQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESE-GAE 1939
Query: 406 ALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEEE 441
A E I +E +E PE E
Sbjct: 1940 AQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESE 1975
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 34.3 bits (77), Expect = 0.25
Identities = 43/152 (28%), Positives = 62/152 (40%), Gaps = 17/152 (11%)
Query: 293 ASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLP---EGRRSEDMIA 349
A+ V P E ++P+A VP P PA +P P + ++P E +
Sbjct: 1030 AAAVPPPEEPTSPAAAVPTPEEP---TSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVP 1086
Query: 350 CPETET-PAVITCDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEALR 408
PE T PA P SP A T E PA+ +V + E EP+ PA A+
Sbjct: 1087 TPEEPTSPAAAVPTPEEPTSPAAAVPTPEE----PASPAAAVPTPE--EPAS--PAAAV- 1137
Query: 409 DPSLQDALEVDLAVSVSQISIEEKVKELSPEE 440
P+ ++ AV + S V +PEE
Sbjct: 1138 -PTPEEPAFPAPAVPTPEESASAAVAVPTPEE 1168
Score = 33.5 bits (75), Expect = 0.43
Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 290 ADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIA 349
A A+ V P E ++P+A VP P PA +P P + +++P S A
Sbjct: 1118 ASPAAAVPTPEEPASPAAAVPTPEEPA---FPAPAVPTPEESASAAVAVPTPEESASPAA 1174
Query: 350 CPETETPA------VITCDPLSQPS---PQPADFTET-ETILQPANKVESVSSEETFEPS 399
T + V T + + P+ P PA T E PA V + + +
Sbjct: 1175 AVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAA 1234
Query: 400 QELPAEALRDPSLQDALEVDLAVSVSQISIEE 431
P E + LE + + + ++ EE
Sbjct: 1235 VSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEE 1266
Score = 33.1 bits (74), Expect = 0.56
Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 9/121 (7%)
Query: 290 ADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLP---EGRRSED 346
A A+ V P E ++P+A VP P PA +P P + ++P E
Sbjct: 1001 ASPAAAVPTPEEPTSPAAAVPTPEEP---TSPAAAVPPPEEPTSPAAAVPTPEEPTSPAA 1057
Query: 347 MIACPETETPAVITCDPLSQPSPQPADFTETETILQPANKV---ESVSSEETFEPSQELP 403
+ PE T +P+ A E PA V E +S P+ E P
Sbjct: 1058 AVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEP 1117
Query: 404 A 404
A
Sbjct: 1118 A 1118
Score = 31.2 bits (69), Expect = 2.1
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 15/123 (12%)
Query: 292 SASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLP---EGRRSEDMI 348
+A V P E ++P+A VP P PA +P P + ++P E +
Sbjct: 990 AAVRVSTPEEPASPAAAVPTPEEP---TSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAV 1046
Query: 349 ACPETET-PAVITCDPLSQPSPQPADFTETETILQPANKVESVSSEETFEPSQELPAEAL 407
PE T PA P SP A T E P + +V + E EP+ PA A+
Sbjct: 1047 PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEE----PTSPAAAVPTPE--EPTS--PAAAV 1098
Query: 408 RDP 410
P
Sbjct: 1099 PTP 1101
Score = 30.0 bits (66), Expect = 4.7
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 17/104 (16%)
Query: 301 ENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACPETETPAVIT 360
E ++P+A VP + P EPT +L E P + AV+T
Sbjct: 1214 EFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEE----------PTSSAAAVLT 1263
Query: 361 CDPLSQPSPQPADFTETETILQPANKVESVSS-EETFEPSQELP 403
+ LS P+ T +PA+ +VS+ EE P+ +P
Sbjct: 1264 PEELSSPA------ASVPTPEEPASPAAAVSNLEEPASPAAAVP 1301
>gi|158303333 synaptopodin isoform B [Homo sapiens]
Length = 685
Score = 34.3 bits (77), Expect = 0.25
Identities = 50/184 (27%), Positives = 70/184 (38%), Gaps = 32/184 (17%)
Query: 259 NVLPLYKSVQAGEARASPGHTLCHSDVGGPCADSASGVGEPCENSTPSAGVPCANSPLGS 318
N L L ++ +A ++ +P HS P AD + P T P +NS
Sbjct: 40 NGLHLSQNREAQQSSPAPPPAEVHS----PAADVNQNLASPSATLT----TPTSNS--SH 89
Query: 319 NQPAQGLPE--PTQIVDETLSLPEGRRSEDMIACPETETPAVITCDPLSQPS-------P 369
N PA + + P +V ++L L +++ P T P S+PS P
Sbjct: 90 NPPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGT------GPASKPSTLCADGQP 143
Query: 370 Q-PADFTETETIL-----QPANKVESVSSEETFEPSQELPAEALRDPSLQ-DALEVDLAV 422
Q PA+ T+L PA + S E T PS PA SL D L V
Sbjct: 144 QAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVV 203
Query: 423 SVSQ 426
S Q
Sbjct: 204 SADQ 207
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 34.3 bits (77), Expect = 0.25
Identities = 50/184 (27%), Positives = 70/184 (38%), Gaps = 32/184 (17%)
Query: 259 NVLPLYKSVQAGEARASPGHTLCHSDVGGPCADSASGVGEPCENSTPSAGVPCANSPLGS 318
N L L ++ +A ++ +P HS P AD + P T P +NS
Sbjct: 40 NGLHLSQNREAQQSSPAPPPAEVHS----PAADVNQNLASPSATLT----TPTSNS--SH 89
Query: 319 NQPAQGLPE--PTQIVDETLSLPEGRRSEDMIACPETETPAVITCDPLSQPS-------P 369
N PA + + P +V ++L L +++ P T P S+PS P
Sbjct: 90 NPPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGT------GPASKPSTLCADGQP 143
Query: 370 Q-PADFTETETIL-----QPANKVESVSSEETFEPSQELPAEALRDPSLQ-DALEVDLAV 422
Q PA+ T+L PA + S E T PS PA SL D L V
Sbjct: 144 QAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVV 203
Query: 423 SVSQ 426
S Q
Sbjct: 204 SADQ 207
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 34.3 bits (77), Expect = 0.25
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 262 PLYKSVQAGEARASPGHTLCHSDVGGPC----ADSASGVGEPCENSTPSAGVPCANSPLG 317
PL Q EA P +LC D P A +A G G + A P A P G
Sbjct: 2250 PLGSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAP-AEGPPG 2308
Query: 318 SNQPAQGLPEPT 329
QP P+PT
Sbjct: 2309 GIQPEAAEPKPT 2320
>gi|239746922 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 2 [Homo sapiens]
Length = 294
Score = 33.9 bits (76), Expect = 0.33
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 46/157 (29%)
Query: 314 SPLGSNQPAQGLPEPTQIVDETLSL----PEGRRS---EDMIACPETETPAVITCDPLSQ 366
+P GS +P +V E L + PEG ++ PE E PA + + +
Sbjct: 151 APSGSEEPR------LLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPADLA-EMARE 203
Query: 367 PSPQPADFTETETILQPANKVESVSSEETFEPSQELPA---EALRDPSLQDALEVDLAVS 423
P+ +PA+ TE + E ++ E EP++E PA E+ +P+ ++A
Sbjct: 204 PAEEPAEEKPTEEAAE-----EELAEEAAEEPAKEEPAAEEESAEEPATEEAA------- 251
Query: 424 VSQISIEEKVKELSPEE----ERRKWEEGRIDYMGKD 456
+PEE + KW+E D GK+
Sbjct: 252 -------------APEEVTKYQHEKWDEEAQDAAGKE 275
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 33.9 bits (76), Expect = 0.33
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 349 ACPETE-TPAVITCDPLSQPSPQPADFTE----------TETILQPANKVESVSSEETFE 397
ACP +E + C P Q P+P E E I+ + ++E+
Sbjct: 1435 ACPPSEGDDYIFHCHPPDQKIPKPKRLQEWYKKMLDKAFAERIIHDYKDIFKQATEDRLT 1494
Query: 398 PSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEEERRKWEE 447
++ELP E D +V +EE +KEL EEE RK EE
Sbjct: 1495 SAKELPY-----------FEGDFWPNV----LEESIKELEQEEEERKKEE 1529
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 33.9 bits (76), Expect = 0.33
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 349 ACPETE-TPAVITCDPLSQPSPQPADFTE----------TETILQPANKVESVSSEETFE 397
ACP +E + C P Q P+P E E I+ + ++E+
Sbjct: 1473 ACPPSEGDDYIFHCHPPDQKIPKPKRLQEWYKKMLDKAFAERIIHDYKDIFKQATEDRLT 1532
Query: 398 PSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEEERRKWEE 447
++ELP E D +V +EE +KEL EEE RK EE
Sbjct: 1533 SAKELPY-----------FEGDFWPNV----LEESIKELEQEEEERKKEE 1567
>gi|24307965 UBX domain containing 2 [Homo sapiens]
Length = 508
Score = 33.9 bits (76), Expect = 0.33
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 7/124 (5%)
Query: 337 SLPEGRRSEDMIACPETETPAVITCDPLSQPSPQ-----PADFTETETILQPANKVESVS 391
S+ G +SE ++ P TC+ + + P T+++T + + S
Sbjct: 120 SVANGSQSESSVSTPSASFEPNNTCENSQSRNAELCEIPPTSDTKSDTATGGESAGHATS 179
Query: 392 SEETFEPSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEEERRKWEEGRID 451
S+E S + PAE L + L L + EE+ +E+ E ERRK + +D
Sbjct: 180 SQEPSGCSDQRPAEDLN--IRVERLTKKLEERREEKRKEEEQREIKKEIERRKTGKEMLD 237
Query: 452 YMGK 455
Y K
Sbjct: 238 YKRK 241
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 33.5 bits (75), Expect = 0.43
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 33/116 (28%)
Query: 295 GVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRRSEDMIACPETE 354
G +S PSA P A P + A G + GRR+
Sbjct: 484 GARPASRSSLPSAPAPPAQQPQAARHGAAGRDQ-------------GRRAA--------- 521
Query: 355 TPAVITCDPLSQPSP---------QPADFTETETILQPANKVESVSSEETFEPSQE 401
DP +QPSP PAD+ E E IL+ A ++ S+++F P ++
Sbjct: 522 --GAQLHDPTTQPSPPTGAQQVEEDPADYEEFEDILESARHPQASHSDDSFYPFED 575
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 33.5 bits (75), Expect = 0.43
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 334 ETLSLPEGRRSEDMIACPETETPAVITCDPLSQPSPQPADFTETETILQPANKVESVSSE 393
E PE ++ D + PE +TPA + P+ A E + P K +S E
Sbjct: 748 EKAKSPEKAKTLD-VKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSP-EKAKSPLKE 805
Query: 394 ETFEPSQELP-AEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEEERRK 444
+ P +E+P E ++ P ++ ++ V EE+ +P+ E +K
Sbjct: 806 DAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKK 857
>gi|24797153 faciogenital dysplasia protein [Homo sapiens]
Length = 961
Score = 33.5 bits (75), Expect = 0.43
Identities = 43/178 (24%), Positives = 66/178 (37%), Gaps = 27/178 (15%)
Query: 283 SDVGGPCADSASGVGEPCENSTPSAGV-PCANSP-----------LGSNQPAQGLPEPTQ 330
S +GGP G + + P V PC SP L +QP GL + +
Sbjct: 50 SALGGPLDPQFVGPSDTSLGAAPGHRVLPCGPSPQHHRALRFSYHLEGSQPRPGLHQGNR 109
Query: 331 IVDETLSL---------PEGRRSEDMIACPETETPAVITCDPLSQPSPQPADFTETETIL 381
I+ ++LSL PEG + P TETP+ P P+P + +
Sbjct: 110 ILVKSLSLDPGQSLEPHPEGPQRLRSDPGPPTETPSQRPSPLKRAPGPKPQVPPKPSYLQ 169
Query: 382 QPANKVESVSSEETFEPSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPE 439
P ++ PS+ LPA DP + L S S ++ +++ E
Sbjct: 170 MP--RMPPPLEPIPPPPSRPLPA----DPRVAKGLAPRAEASPSSAAVSSLIEKFERE 221
>gi|195947361 histidine acid phosphatase domain containing 2A isoform
2 [Homo sapiens]
Length = 1408
Score = 33.5 bits (75), Expect = 0.43
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 13/164 (7%)
Query: 284 DVGGPCADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRR 343
D+ PC D + + +PC+ P C + N Q +P +Q ++ L +
Sbjct: 1238 DISQPCQDISEALSQPCQ-KVPDISQQCQENHDNGNHTCQEVPHISQPCQKSSQLCQKVS 1296
Query: 344 SEDMIACPETETPAVITCDPLSQPSPQ-------PADFTETETILQPANKVESVSSEETF 396
E C E C +S + ET+++ + E + EE
Sbjct: 1297 EEVCQLCLENSEEVSQPCQGVSVEVGKLVHKFHVGVGSLVQETLVEVGSPAEEI-PEEVI 1355
Query: 397 EPSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEE 440
+P QE E R A+ + L+ + +I +K + PEE
Sbjct: 1356 QPYQEFSVEVGRLAQETSAINL-LSQGIPEI---DKPSQEFPEE 1395
>gi|195947359 histidine acid phosphatase domain containing 2A isoform
5 [Homo sapiens]
Length = 1433
Score = 33.5 bits (75), Expect = 0.43
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 13/164 (7%)
Query: 284 DVGGPCADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRR 343
D+ PC D + + +PC+ P C + N Q +P +Q ++ L +
Sbjct: 1263 DISQPCQDISEALSQPCQ-KVPDISQQCQENHDNGNHTCQEVPHISQPCQKSSQLCQKVS 1321
Query: 344 SEDMIACPETETPAVITCDPLSQPSPQ-------PADFTETETILQPANKVESVSSEETF 396
E C E C +S + ET+++ + E + EE
Sbjct: 1322 EEVCQLCLENSEEVSQPCQGVSVEVGKLVHKFHVGVGSLVQETLVEVGSPAEEI-PEEVI 1380
Query: 397 EPSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEE 440
+P QE E R A+ + L+ + +I +K + PEE
Sbjct: 1381 QPYQEFSVEVGRLAQETSAINL-LSQGIPEI---DKPSQEFPEE 1420
>gi|66932994 histidine acid phosphatase domain containing 2A isoform 4
[Homo sapiens]
Length = 1194
Score = 33.5 bits (75), Expect = 0.43
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 13/164 (7%)
Query: 284 DVGGPCADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRR 343
D+ PC D + + +PC+ P C + N Q +P +Q ++ L +
Sbjct: 1024 DISQPCQDISEALSQPCQ-KVPDISQQCQENHDNGNHTCQEVPHISQPCQKSSQLCQKVS 1082
Query: 344 SEDMIACPETETPAVITCDPLSQPSPQ-------PADFTETETILQPANKVESVSSEETF 396
E C E C +S + ET+++ + E + EE
Sbjct: 1083 EEVCQLCLENSEEVSQPCQGVSVEVGKLVHKFHVGVGSLVQETLVEVGSPAEEI-PEEVI 1141
Query: 397 EPSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEE 440
+P QE E R A+ + L+ + +I +K + PEE
Sbjct: 1142 QPYQEFSVEVGRLAQETSAINL-LSQGIPEI---DKPSQEFPEE 1181
>gi|66932992 histidine acid phosphatase domain containing 2A isoform 2
[Homo sapiens]
Length = 1408
Score = 33.5 bits (75), Expect = 0.43
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 13/164 (7%)
Query: 284 DVGGPCADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDETLSLPEGRR 343
D+ PC D + + +PC+ P C + N Q +P +Q ++ L +
Sbjct: 1238 DISQPCQDISEALSQPCQ-KVPDISQQCQENHDNGNHTCQEVPHISQPCQKSSQLCQKVS 1296
Query: 344 SEDMIACPETETPAVITCDPLSQPSPQ-------PADFTETETILQPANKVESVSSEETF 396
E C E C +S + ET+++ + E + EE
Sbjct: 1297 EEVCQLCLENSEEVSQPCQGVSVEVGKLVHKFHVGVGSLVQETLVEVGSPAEEI-PEEVI 1355
Query: 397 EPSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEE 440
+P QE E R A+ + L+ + +I +K + PEE
Sbjct: 1356 QPYQEFSVEVGRLAQETSAINL-LSQGIPEI---DKPSQEFPEE 1395
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.1 bits (74), Expect = 0.56
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 325 LPEPTQIVDETLSLPEGRRSEDMIACPETETPA-VITCDPLSQPSPQPADFTETETILQP 383
L E +++ +T + P G SE + TP+ VIT ++Q P T
Sbjct: 7318 LAESSEMTIKTQTSPPGSTSESTFTLDTSTTPSLVITHSTMTQRLPHSEITTLVSRGAGD 7377
Query: 384 ANKVESVSSEETFEPSQELPAEALRDPS 411
+ S+ EET PS +L A+ PS
Sbjct: 7378 VPRPSSLPVEETSPPSSQLSLSAMISPS 7405
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,253,405
Number of Sequences: 37866
Number of extensions: 1019747
Number of successful extensions: 4238
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 4078
Number of HSP's gapped (non-prelim): 326
length of query: 470
length of database: 18,247,518
effective HSP length: 106
effective length of query: 364
effective length of database: 14,233,722
effective search space: 5181074808
effective search space used: 5181074808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.