Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HISPPD2A Sequence: fasta or formatted (1408aa) NCBI GI: 195947361
Description:

histidine acid phosphatase domain containing 2A isoform 2

Referenced in:

Cytoskeleton
Inositol Pathways

Other entries for this name:
alt prot [1433aa] histidine acid phosphatase domain containing 2A isoform 5
alt mRNA [1408aa] histidine acid phosphatase domain containing 2A isoform 2
alt prot [1194aa] histidine acid phosphatase domain containing 2A isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         74           3
 C cysteine            2.2         31           1
 D aspartate           4.7         66           2
 E glutamate           9.2        130           3
 F phenylalanine       3.2         45           2
 G glycine             7.2        101           3
 H histidine           2.8         39           2
 I isoleucine          4.3         60           2
 K lysine              4.6         65           2
 L leucine             9.8        138           3
 M methionine          2.2         31           2
 N asparagine          2.8         39           1
 P proline             7.0         99           2
 Q glutamine           6.3         89           2
 R arginine            5.2         73           2
 S serine              9.3        131           3
 T threonine           4.2         59           2
 V valine              6.3         89           2
 W tryptophan          0.5          7           1
 Y tyrosine            3.0         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   histidine acid phosphatase domain containing 2A iso... 
HISPPD2A              1.000   histidine acid phosphatase domain containing 2A isof...
HISPPD2A              0.994   histidine acid phosphatase domain containing 2A iso...
HISPPD2A              0.603   histidine acid phosphatase domain containing 2A isof...
HISPPD1               0.550   Histidine acid phosphatase domain containing 1 [Homo...
TRIOBP                0.007   TRIO and F-actin binding protein isoform 6 
MICALL1               0.007   molecule interacting with Rab13 
VCX3B                 0.006   variable charge, X-linked 3B 
DCAF6                 0.005   IQ motif and WD repeats 1 isoform b 
MUC12                 0.005   PREDICTED: mucin 12 
ZNF853                0.005   zinc finger protein 853 
LOC100130716          0.005   PREDICTED: similar to mucin 11 
HUWE1                 0.005   HECT, UBA and WWE domain containing 1 
LRRC37A3              0.005   leucine rich repeat containing 37, member A3 
MUC5AC                0.005   mucin 5AC 
LOC100294335          0.005   PREDICTED: similar to c114 SLIT-like testicular pro...
LOC100294335          0.005   PREDICTED: similar to c114 SLIT-like testicular pro...
MLL2                  0.005   myeloid/lymphoid or mixed-lineage leukemia 2 
LRRC37A2              0.005   c114 SLIT-like testicular protein 
LRRC37A               0.005   leucine rich repeat containing 37A 
MLL3                  0.005   myeloid/lymphoid or mixed-lineage leukemia 3 
MAGEC1                0.005   melanoma antigen family C, 1 
MYRIP                 0.005   myosin VIIA and Rab interacting protein 
UNK                   0.005   zinc finger CCCH-type domain containing 5 
DOCK3                 0.004   dedicator of cytokinesis 3 
YLPM1                 0.004   YLP motif containing 1 
NFIA                  0.004   nuclear factor I/A isoform 4 
NFIA                  0.004   nuclear factor I/A isoform 3 
NFIA                  0.004   nuclear factor I/A isoform 2 
NFIA                  0.004   nuclear factor I/A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press