Guide to the Human Genome
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Name: TANK Sequence: fasta or formatted (425aa) NCBI GI: 19743569
Description:

TRAF interacting protein TANK isoform a

Referenced in:

TNF and Related Signals

Other entries for this name:
alt prot [119aa] TRAF interacting protein TANK isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         22           2
 C cysteine            2.6         11           1
 D aspartate           7.3         31           2
 E glutamate           7.3         31           2
 F phenylalanine       4.5         19           1
 G glycine             3.8         16           1
 H histidine           1.9          8           1
 I isoleucine          5.2         22           2
 K lysine              7.1         30           1
 L leucine             8.9         38           3
 M methionine          1.2          5           1
 N asparagine          5.6         24           2
 P proline             7.5         32           2
 Q glutamine           6.4         27           2
 R arginine            5.2         22           2
 S serine              8.2         35           2
 T threonine           6.8         29           2
 V valine              4.0         17           2
 W tryptophan          0.5          2           1
 Y tyrosine            0.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TRAF interacting protein TANK isoform a 
TANK                  0.230   TRAF interacting protein TANK isoform b 
AZI2                  0.038   5-azacytidine induced 2 isoform a 
AZI2                  0.021   5-azacytidine induced 2 isoform c 
AZI2                  0.021   5-azacytidine induced 2 isoform b 
LOC653073             0.018   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.017   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.015   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC283767             0.014   golgi autoantigen, golgin subfamily a-like 
LOC728080             0.014   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.014   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.014   PREDICTED: similar to Golgin subfamily A member 8-l...
MASTL                 0.014   microtubule associated serine/threonine kinase-like...
LOC400352             0.013   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.013   PREDICTED: similar to Putative golgin subfamily A m...
LOC643699             0.013   PREDICTED: similar to golgi autoantigen, golgin sub...
SLK                   0.013   serine/threonine kinase 2 
LOC645202             0.012   PREDICTED: hypothetical protein LOC645202 
GUCY2F                0.012   guanylate cyclase 2F 
LOC653061             0.012   PREDICTED: similar to Golgin subfamily A member 8-l...
CAGE1                 0.012   cancer antigen 1 
AKAP9                 0.012   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.012   A-kinase anchor protein 9 isoform 3 
ERC2                  0.012   cytomatrix protein p110 
GUCY2D                0.011   guanylate cyclase 2D, membrane (retina-specific) [Hom...
ERC1                  0.011   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.011   RAB6-interacting protein 2 isoform delta 
LOC390561             0.011   PREDICTED: similar to hect domain and RLD 2 
MAD1L1                0.011   MAD1-like 1 protein 
MAD1L1                0.011   MAD1-like 1 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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