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Search of human proteins with 239756768
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756768 PREDICTED: similar to hCG1774990 [Homo sapiens]
(280 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756768 PREDICTED: similar to hCG1774990 [Homo sapiens] 556 e-159
gi|239745760 PREDICTED: similar to hCG1774990 [Homo sapiens] 556 e-159
gi|239751271 PREDICTED: similar to hCG1774990 [Homo sapiens] 461 e-130
gi|60460889 Myb protein P42POP [Homo sapiens] 37 0.015
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 37 0.019
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 37 0.019
gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo ... 37 0.019
gi|30795231 brain abundant, membrane attached signal protein 1 [... 37 0.025
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 37 0.025
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ... 37 0.025
gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo ... 36 0.033
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 36 0.043
gi|226051634 zinc finger protein 414 isoform 1 [Homo sapiens] 35 0.056
gi|11386197 forkhead box E3 [Homo sapiens] 35 0.056
gi|12232397 SMAD specific E3 ubiquitin protein ligase 2 [Homo sa... 35 0.073
gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2 [Homo... 35 0.073
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 35 0.096
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 35 0.096
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 35 0.096
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 35 0.096
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 35 0.096
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 34 0.12
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 34 0.12
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 34 0.12
gi|74272284 membrane associated guanylate kinase, WW and PDZ dom... 34 0.12
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens] 34 0.16
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 34 0.16
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ... 34 0.16
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ... 34 0.16
gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a... 34 0.16
>gi|239756768 PREDICTED: similar to hCG1774990 [Homo sapiens]
Length = 280
Score = 556 bits (1432), Expect = e-159
Identities = 280/280 (100%), Positives = 280/280 (100%)
Query: 1 MGCFCPSLFSSTSHTLVKQLLDSSVEPTIGLLIILQEALLAPITFLYVTDRRFLSSAVSS 60
MGCFCPSLFSSTSHTLVKQLLDSSVEPTIGLLIILQEALLAPITFLYVTDRRFLSSAVSS
Sbjct: 1 MGCFCPSLFSSTSHTLVKQLLDSSVEPTIGLLIILQEALLAPITFLYVTDRRFLSSAVSS 60
Query: 61 TSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRRLLGLAQ 120
TSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRRLLGLAQ
Sbjct: 61 TSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRRLLGLAQ 120
Query: 121 TRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPASSAAQDDYARHVRDPPA 180
TRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPASSAAQDDYARHVRDPPA
Sbjct: 121 TRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPASSAAQDDYARHVRDPPA 180
Query: 181 VAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGPVKLHLTGILKS 240
VAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGPVKLHLTGILKS
Sbjct: 181 VAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGPVKLHLTGILKS 240
Query: 241 LIQLQSVYGITRRSIRNKVLDFSVVFIFFQCHQPPQRHWL 280
LIQLQSVYGITRRSIRNKVLDFSVVFIFFQCHQPPQRHWL
Sbjct: 241 LIQLQSVYGITRRSIRNKVLDFSVVFIFFQCHQPPQRHWL 280
>gi|239745760 PREDICTED: similar to hCG1774990 [Homo sapiens]
Length = 280
Score = 556 bits (1432), Expect = e-159
Identities = 280/280 (100%), Positives = 280/280 (100%)
Query: 1 MGCFCPSLFSSTSHTLVKQLLDSSVEPTIGLLIILQEALLAPITFLYVTDRRFLSSAVSS 60
MGCFCPSLFSSTSHTLVKQLLDSSVEPTIGLLIILQEALLAPITFLYVTDRRFLSSAVSS
Sbjct: 1 MGCFCPSLFSSTSHTLVKQLLDSSVEPTIGLLIILQEALLAPITFLYVTDRRFLSSAVSS 60
Query: 61 TSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRRLLGLAQ 120
TSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRRLLGLAQ
Sbjct: 61 TSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRRLLGLAQ 120
Query: 121 TRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPASSAAQDDYARHVRDPPA 180
TRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPASSAAQDDYARHVRDPPA
Sbjct: 121 TRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPASSAAQDDYARHVRDPPA 180
Query: 181 VAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGPVKLHLTGILKS 240
VAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGPVKLHLTGILKS
Sbjct: 181 VAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGPVKLHLTGILKS 240
Query: 241 LIQLQSVYGITRRSIRNKVLDFSVVFIFFQCHQPPQRHWL 280
LIQLQSVYGITRRSIRNKVLDFSVVFIFFQCHQPPQRHWL
Sbjct: 241 LIQLQSVYGITRRSIRNKVLDFSVVFIFFQCHQPPQRHWL 280
>gi|239751271 PREDICTED: similar to hCG1774990 [Homo sapiens]
Length = 246
Score = 461 bits (1187), Expect = e-130
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 50 DRRFLSSAVSSTSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASA 109
DRRFLSSAVSSTSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASA
Sbjct: 16 DRRFLSSAVSSTSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASA 75
Query: 110 DQRRRLLGLAQTRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPASSAAQD 169
DQRRRLLGLAQTRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPASSAAQD
Sbjct: 76 DQRRRLLGLAQTRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPASSAAQD 135
Query: 170 DYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGP 229
DYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGP
Sbjct: 136 DYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGP 195
Query: 230 VKLHLTGILKSLIQLQSVYGITRRSIRNKVLDFSVVFIFFQCHQPPQRHWL 280
VKLHLTGILKSLIQLQSVYGITRRSIRNKVLDFSVVFIFFQCHQPPQRHWL
Sbjct: 196 VKLHLTGILKSLIQLQSVYGITRRSIRNKVLDFSVVFIFFQCHQPPQRHWL 246
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 37.4 bits (85), Expect = 0.015
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 21/143 (14%)
Query: 90 WRRRSRESCS----GAAGAPPASADQRRR-------LLGLAQTRGGKGRRGREDAAEARA 138
++RR++E + GA PA+ D +LG G G E A +
Sbjct: 83 FKRRTKEKLARVPHSTQGAGPAAEDAFSAEEETIFAILGPGVAAPGAGAGAEEPPAAPSS 142
Query: 139 -----AGC--RLVVQPRPRKEKWEERGARRPASSAAQDDYARHVRDPPAVAVAAPKARAS 191
+ C R V+ R+++ + A A S++ + +AR P PK R S
Sbjct: 143 QPPPPSACPQRYVLSEDRREDRRADTSAHSKAGSSSPEPWARPSCTPQEGGCPRPKERES 202
Query: 192 APDAVVTP---PRLAVAPVPVLP 211
P + + P PRLA++P P P
Sbjct: 203 PPPSALQPVQLPRLALSPPPPAP 225
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 37.0 bits (84), Expect = 0.019
Identities = 39/134 (29%), Positives = 49/134 (36%), Gaps = 23/134 (17%)
Query: 105 PPASADQRRRLLGLAQTRG-GKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPA 163
P Q R L LA+ G GK GR A+AR PRP + WE RG R
Sbjct: 55 PTFPGTQPPRALRLAEGSGEGKQEEGRR--AQAR---------PRPLRPPWEVRGGARGP 103
Query: 164 SSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGD----- 218
SA A P+ A A P A + PR +P A +G
Sbjct: 104 CSAPVGSRASSGPGLPSAAAARP-----ARKTLTCQPRSIESPATASSAGCGSGPRVPQV 158
Query: 219 -MSNPGSRRNGPVK 231
+ PG R + P +
Sbjct: 159 RLLGPGGRPSSPAR 172
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 37.0 bits (84), Expect = 0.019
Identities = 39/134 (29%), Positives = 49/134 (36%), Gaps = 23/134 (17%)
Query: 105 PPASADQRRRLLGLAQTRG-GKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPA 163
P Q R L LA+ G GK GR A+AR PRP + WE RG R
Sbjct: 73 PTFPGTQPPRALRLAEGSGEGKQEEGRR--AQAR---------PRPLRPPWEVRGGARGP 121
Query: 164 SSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGD----- 218
SA A P+ A A P A + PR +P A +G
Sbjct: 122 CSAPVGSRASSGPGLPSAAAARP-----ARKTLTCQPRSIESPATASSAGCGSGPRVPQV 176
Query: 219 -MSNPGSRRNGPVK 231
+ PG R + P +
Sbjct: 177 RLLGPGGRPSSPAR 190
>gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo
sapiens]
Length = 325
Score = 37.0 bits (84), Expect = 0.019
Identities = 39/134 (29%), Positives = 49/134 (36%), Gaps = 23/134 (17%)
Query: 105 PPASADQRRRLLGLAQTRG-GKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERGARRPA 163
P Q R L LA+ G GK GR A+AR PRP + WE RG R
Sbjct: 73 PTFPGTQPPRALRLAEGSGEGKQEEGRR--AQAR---------PRPLRPPWEVRGGARGP 121
Query: 164 SSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGD----- 218
SA A P+ A A P A + PR +P A +G
Sbjct: 122 CSAPVGSRASSGPGLPSAAAARP-----ARKTLTCQPRSIESPATASSAGCGSGPRVPQV 176
Query: 219 -MSNPGSRRNGPVK 231
+ PG R + P +
Sbjct: 177 RLLGPGGRPSSPAR 190
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 36.6 bits (83), Expect = 0.025
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
Query: 96 ESCSGAAGAPPASADQRRRLLGLAQTRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWE 155
E + A PP + +Q + G A GG+ + E AA A A P KE+ E
Sbjct: 91 EGAAEAKAEPPKAPEQEQAAPGPAA--GGEAPKAAE-AAAAPAESAAPAAGEEPSKEEGE 147
Query: 156 ERGARRPASSAAQD---DYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAPVPVLPA 212
+ PA+ AAQ+ D A P + AAP ++ P A P + P PA
Sbjct: 148 PKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSK-ETPAATEAP---SSTPKAQGPA 203
Query: 213 ASA 215
ASA
Sbjct: 204 ASA 206
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 36.6 bits (83), Expect = 0.025
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 78 KQNPGSLRQKGGWRRRSRESCSGAAGAPPASA----DQRRRLLGLAQTRGGK--GRRGRE 131
K G +R +GG + R R + AAGA Q+ R +G A+ RG K RRG++
Sbjct: 164 KSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVG-ARRRGWKKLRRRGKK 222
Query: 132 DAAE-ARAAGCRLVVQPRPRKEKWEERGARRPASSAAQDDYARHVRDPPAVAVAA 185
AA AG +L Q ++K RG + ++AA + + R A AV+A
Sbjct: 223 AAAAGGEKAGKKLRQQGEKGRKKPRRRGQK---AAAAGGERCKKPRRQKAAAVSA 274
>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
sapiens]
Length = 300
Score = 36.6 bits (83), Expect = 0.025
Identities = 44/136 (32%), Positives = 49/136 (36%), Gaps = 27/136 (19%)
Query: 99 SGAAGAPPASADQRRRLLGLAQTRGGKGRRGREDAAEARAAGCRLVVQPRPRKEKWEERG 158
S AA P R A T RE+A E RA GC
Sbjct: 182 SPAARQPEPPPMPRAARSARAATAARAAAAEREEAREERARGC--------------SEA 227
Query: 159 ARRPASSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAPVPVLP----AAS 214
+R + S A V A A AA +AR AP A A +PVPV P A S
Sbjct: 228 SRTSSDSGPSRAPAARVVGGEAAATAAARARPRAPLA-------AGSPVPVRPQDAAARS 280
Query: 215 AAGDMSNPGSRRNGPV 230
AAG PG R PV
Sbjct: 281 AAG--MQPGHGRRPPV 294
>gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo
sapiens]
Length = 244
Score = 36.2 bits (82), Expect = 0.033
Identities = 41/136 (30%), Positives = 54/136 (39%), Gaps = 22/136 (16%)
Query: 141 CRLVVQPRPRKE-KWEERGARRPASSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTP 199
C Q RPR R RRPA A D R + P P +R S
Sbjct: 66 CPRASQDRPRPSCPLASRDRRRPAIPRASPDRPRPISPAPP---GPPTSRQS-------- 114
Query: 200 PRLAVAPVPVLPAASAAGDMSNPGSRRNGPVKLHLTGILKSLIQLQSVYGITRRSIRNKV 259
PR++VA PVLPAA P RR PV + + + L+ TRR R+ +
Sbjct: 115 PRISVAAAPVLPAAPRP-----PTQRRCVPVAQRGLPLCGTGLGLE-----TRRPARSCL 164
Query: 260 LDFSVVFIFFQCHQPP 275
+ + F F +C P
Sbjct: 165 GETAAPFRFPRCECKP 180
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 35.8 bits (81), Expect = 0.043
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 92 RRSRESCSGAAGAPPASADQRRRLLGLAQTRGGKGRRGREDAAEARAAGCRLVVQPRPRK 151
R+ + +GA GA +++ ++ GG+GR+ R +A A G + +PR R
Sbjct: 86 RQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSK---KPRWRA 142
Query: 152 EK-----WEERGARRPASSAAQDDYARHVRDPPAVAVAAPKARA 190
+K + RGA ++AA ++ P A A K+R+
Sbjct: 143 QKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRS 186
Score = 35.8 bits (81), Expect = 0.043
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 75 IREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRRLLG--LAQTRGGKGRRGRED 132
+RE + G R+K W+ R + A P ++ R G A++RGGK R G
Sbjct: 389 LREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGK 448
Query: 133 AAEARAAGCRLVVQPRPRKEKWEERGARRPASSA 166
R R + + +++ R+ AS+A
Sbjct: 449 KPRRRGQKARQKAAEAGAESRGDKKQGRQKASAA 482
>gi|226051634 zinc finger protein 414 isoform 1 [Homo sapiens]
Length = 390
Score = 35.4 bits (80), Expect = 0.056
Identities = 38/125 (30%), Positives = 49/125 (39%), Gaps = 20/125 (16%)
Query: 93 RSRESCSGAAGAPPASADQRRRLLGLAQTRGGKGRR--GREDAAEARAAGCRLVVQPRPR 150
R R + A G P +SA ++ +Q G RR G DA AA R+V
Sbjct: 268 RLRPFLAAAPGPPASSAAVWKK----SQGAGSSPRRPQGGSDAPSGHAAPSRIV------ 317
Query: 151 KEKWEERGARRPA-----SSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVA 205
WE R S+A++ H+ D A AAP A PDA P LA
Sbjct: 318 ---WEHTRGRYSCMQCAFSTASRPAMTLHLEDHRPGAPAAPAAGPPRPDAPADPAPLAPK 374
Query: 206 PVPVL 210
P+L
Sbjct: 375 VSPLL 379
>gi|11386197 forkhead box E3 [Homo sapiens]
Length = 319
Score = 35.4 bits (80), Expect = 0.056
Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Query: 158 GARRPASSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTP-PRLAVAPVPVLPAASAA 216
GA P AA D A PP A A+P + PD +V P R P+P P + A
Sbjct: 233 GAPEPPCCAAPD--AAAAAFPPCAAAASPPLYSQVPDRLVLPATRPGPGPLPAEPLLALA 290
Query: 217 GDMSNPGSRRNGPVKLHLTGILKSL 241
G + G G L G L
Sbjct: 291 GPAAALGPLSPGEAYLRQPGFASGL 315
>gi|12232397 SMAD specific E3 ubiquitin protein ligase 2 [Homo
sapiens]
Length = 748
Score = 35.0 bits (79), Expect = 0.073
Identities = 15/17 (88%), Positives = 15/17 (88%)
Query: 219 MSNPGSRRNGPVKLHLT 235
MSNPG RRNGPVKL LT
Sbjct: 1 MSNPGGRRNGPVKLRLT 17
>gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2 [Homo
sapiens]
Length = 367
Score = 35.0 bits (79), Expect = 0.073
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 37/168 (22%)
Query: 71 STISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRRLLGLAQTRGGKGR-RG 129
S S + + PG L ++ + + G GAPP +GGKG R
Sbjct: 8 SPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVG-------------KGGKGESRL 54
Query: 130 REDAAEARAAGCRLVVQPRPRKEKWEERGARRPASSAA--------QDDYARHVRDPPAV 181
+ + A + +V +K+K ++ +PAS+ +++ R RDPP
Sbjct: 55 KRPSVLISALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPP-- 112
Query: 182 AVAAPKARASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGP 229
D T LAV PVP +PAA+A + + GS P
Sbjct: 113 ------------DGGGTAKPLAV-PVPTVPAAAATCEPPSGGSAAAQP 147
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 34.7 bits (78), Expect = 0.096
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 85 RQKG---GWRRRSRESCSGAAGAPPA--------SADQRRRLLGLAQTRGGKGRRGREDA 133
RQ G G R R+R + +G+A PA +A R LGL+ + R
Sbjct: 207 RQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSL 266
Query: 134 AEA--RAAGCRLVVQPRPRKE---KWEERGARRPASSAAQDDYARHVRDPPAVAVAAPKA 188
A R R + P R+ W + + RPAS AQ ARH+ P + +A
Sbjct: 267 ARPPLRFPPARPALSPSARRRCRVNWNQ--SSRPASHNAQRA-ARHIPSRPRAS--GLRA 321
Query: 189 RASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPG 223
RA+ + P AP P+ PAA G +PG
Sbjct: 322 RAARRPGLDPGP----APYPLTPAALRPGTSPHPG 352
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 34.7 bits (78), Expect = 0.096
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 85 RQKG---GWRRRSRESCSGAAGAPPA--------SADQRRRLLGLAQTRGGKGRRGREDA 133
RQ G G R R+R + +G+A PA +A R LGL+ + R
Sbjct: 207 RQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSL 266
Query: 134 AEA--RAAGCRLVVQPRPRKE---KWEERGARRPASSAAQDDYARHVRDPPAVAVAAPKA 188
A R R + P R+ W + + RPAS AQ ARH+ P + +A
Sbjct: 267 ARPPLRFPPARPALSPSARRRCRVNWNQ--SSRPASHNAQRA-ARHIPSRPRAS--GLRA 321
Query: 189 RASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPG 223
RA+ + P AP P+ PAA G +PG
Sbjct: 322 RAARRPGLDPGP----APYPLTPAALRPGTSPHPG 352
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 34.7 bits (78), Expect = 0.096
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 85 RQKG---GWRRRSRESCSGAAGAPPA--------SADQRRRLLGLAQTRGGKGRRGREDA 133
RQ G G R R+R + +G+A PA +A R LGL+ + R
Sbjct: 207 RQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSL 266
Query: 134 AEA--RAAGCRLVVQPRPRKE---KWEERGARRPASSAAQDDYARHVRDPPAVAVAAPKA 188
A R R + P R+ W + + RPAS AQ ARH+ P + +A
Sbjct: 267 ARPPLRFPPARPALSPSARRRCRVNWNQ--SSRPASHNAQRA-ARHIPSRPRAS--GLRA 321
Query: 189 RASAPDAVVTPPRLAVAPVPVLPAASAAGDMSNPG 223
RA+ + P AP P+ PAA G +PG
Sbjct: 322 RAARRPGLDPGP----APYPLTPAALRPGTSPHPG 352
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 34.7 bits (78), Expect = 0.096
Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 22/167 (13%)
Query: 55 SSAVSSTSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRR 114
SSA S+ S P +D T + ++ P RR + PPA Q R
Sbjct: 357 SSASSAQSGPLGTRSDDTGTGPRRERPS---------RRLTTGTPASPRRPPALRSQSRD 407
Query: 115 LLGLAQTRGGKGRRGREDAAEARAAGCR----------LVVQPRPRKEKWEERGARRPAS 164
L + RG G RG + + + A R LV + R + W RG R
Sbjct: 408 RLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRG-RGSGG 466
Query: 165 SAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAPVPVLP 211
S R P A ++ + + +P+ TP + P+ + P
Sbjct: 467 SGRSTPQTPRARSPAAPRLS--RVSSPSPELGTTPASIFRTPLQLDP 511
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 34.7 bits (78), Expect = 0.096
Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 22/167 (13%)
Query: 55 SSAVSSTSIPANFFTDSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRR 114
SSA S+ S P +D T + ++ P RR + PPA Q R
Sbjct: 357 SSASSAQSGPLGTRSDDTGTGPRRERPS---------RRLTTGTPASPRRPPALRSQSRD 407
Query: 115 LLGLAQTRGGKGRRGREDAAEARAAGCR----------LVVQPRPRKEKWEERGARRPAS 164
L + RG G RG + + + A R LV + R + W RG R
Sbjct: 408 RLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRG-RGSGG 466
Query: 165 SAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAPVPVLP 211
S R P A ++ + + +P+ TP + P+ + P
Sbjct: 467 SGRSTPQTPRARSPAAPRLS--RVSSPSPELGTTPASIFRTPLQLDP 511
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 34.3 bits (77), Expect = 0.12
Identities = 43/147 (29%), Positives = 50/147 (34%), Gaps = 28/147 (19%)
Query: 86 QKGGWRRRSRESCSGAAGAPPA---------SADQRRRLLGLAQTRGGKGRRGREDAAEA 136
QKG + + G G PP SA QRRR TR +G RG
Sbjct: 130 QKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRR-----PTRRPRGTRGGARRPGV 184
Query: 137 RAAGCRLV--VQPRPRKEKWEER----GARRPASSAAQDDYARHVRDPPAVAVAAPKARA 190
R G V PRP R G RRP S R P A
Sbjct: 185 RGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPP--------SPPA 236
Query: 191 SAPDAVVTPPRLAVAPVPVLPAASAAG 217
AP+A+ P AP P+ + SA G
Sbjct: 237 GAPEALRPPASTTRAPAPLTLSFSARG 263
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 34.3 bits (77), Expect = 0.12
Identities = 43/147 (29%), Positives = 50/147 (34%), Gaps = 28/147 (19%)
Query: 86 QKGGWRRRSRESCSGAAGAPPA---------SADQRRRLLGLAQTRGGKGRRGREDAAEA 136
QKG + + G G PP SA QRRR TR +G RG
Sbjct: 130 QKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRR-----PTRRPRGTRGGARRPGV 184
Query: 137 RAAGCRLV--VQPRPRKEKWEER----GARRPASSAAQDDYARHVRDPPAVAVAAPKARA 190
R G V PRP R G RRP S R P A
Sbjct: 185 RGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPP--------SPPA 236
Query: 191 SAPDAVVTPPRLAVAPVPVLPAASAAG 217
AP+A+ P AP P+ + SA G
Sbjct: 237 GAPEALRPPASTTRAPAPLTLSFSARG 263
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 34.3 bits (77), Expect = 0.12
Identities = 43/147 (29%), Positives = 50/147 (34%), Gaps = 28/147 (19%)
Query: 86 QKGGWRRRSRESCSGAAGAPPA---------SADQRRRLLGLAQTRGGKGRRGREDAAEA 136
QKG + + G G PP SA QRRR TR +G RG
Sbjct: 130 QKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRR-----PTRRPRGTRGGARRPGV 184
Query: 137 RAAGCRLV--VQPRPRKEKWEER----GARRPASSAAQDDYARHVRDPPAVAVAAPKARA 190
R G V PRP R G RRP S R P A
Sbjct: 185 RGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPP--------SPPA 236
Query: 191 SAPDAVVTPPRLAVAPVPVLPAASAAG 217
AP+A+ P AP P+ + SA G
Sbjct: 237 GAPEALRPPASTTRAPAPLTLSFSARG 263
>gi|74272284 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform c [Homo sapiens]
Length = 1462
Score = 34.3 bits (77), Expect = 0.12
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 11/117 (9%)
Query: 70 DSTISIREKQNPGSLRQKGGWRRRSRESCSGAAGAPPASADQRRRLLGLAQTRGGKGRRG 129
D+T+ REK R RRR R G+P RLL Q R + RRG
Sbjct: 1334 DNTLERREKHE--KRRDVSPERRRERSPTRRRDGSPSRRRRSLERLL--EQRRSPERRRG 1389
Query: 130 REDAAEARAAGCRLVVQPRPRKEK------WEERGARRPASSA-AQDDYARHVRDPP 179
A++ R P R+E+ E+R + R A + D R R PP
Sbjct: 1390 GSPERRAKSTDRRRARSPERRRERSLDKRNREDRASHREREEANLKQDAGRSSRHPP 1446
>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 33.9 bits (76), Expect = 0.16
Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 147 PRPRKEKWEER---GARRPASSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLA 203
PRP + R GA P S + R RDPPA VA +AR + P A
Sbjct: 67 PRPERPSRRHRAGCGAHGPGSRGRER--RRGSRDPPAGPVARARARGRSAPGSAQPASGA 124
Query: 204 VAPVPVLPAASAAGDMSN--PGSRRN--GPVKLH 233
P AA A D + P +RN G LH
Sbjct: 125 AGPAAAPEAAPPAWDPATLPPSRKRNSLGSSPLH 158
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 33.9 bits (76), Expect = 0.16
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 93 RSRESCSGAAGAPPASA---DQRRRLLGLAQTRGGKGRRGREDAAEARAAGCRLVVQPRP 149
+ RE + AA AP +S ++R+RL Q GG G+R R +GC +
Sbjct: 295 QDREEEAAAAPAPTSSGHRTEKRKRLQLQCQPAGGTGQR--------RGSGCSSSANQQG 346
Query: 150 RKEKWEERGARRPASSAAQDDYARHVRDP---PAVAVAAPKARASAPDA 195
+++ EE A +S+ R + P PA + S+P A
Sbjct: 347 AQDREEEAAAAPVPTSSGHRTEKRKPQQPQRRPAAGTGQRRGSGSSPSA 395
>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
sapiens]
Length = 315
Score = 33.9 bits (76), Expect = 0.16
Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 147 PRPRKEKWEER---GARRPASSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLA 203
PRP + R GA P S + R RDPPA VA +AR + P A
Sbjct: 67 PRPERPSRRHRAGCGAHGPGSRGRER--RRGSRDPPAGPVARARARGRSAPGSAQPASGA 124
Query: 204 VAPVPVLPAASAAGDMSN--PGSRRN--GPVKLH 233
P AA A D + P +RN G LH
Sbjct: 125 AGPAAAPEAAPPAWDPATLPPSRKRNSLGSSPLH 158
>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
sapiens]
Length = 315
Score = 33.9 bits (76), Expect = 0.16
Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 147 PRPRKEKWEER---GARRPASSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLA 203
PRP + R GA P S + R RDPPA VA +AR + P A
Sbjct: 67 PRPERPSRRHRAGCGAHGPGSRGRER--RRGSRDPPAGPVARARARGRSAPGSAQPASGA 124
Query: 204 VAPVPVLPAASAAGDMSN--PGSRRN--GPVKLH 233
P AA A D + P +RN G LH
Sbjct: 125 AGPAAAPEAAPPAWDPATLPPSRKRNSLGSSPLH 158
>gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a
[Homo sapiens]
Length = 410
Score = 33.9 bits (76), Expect = 0.16
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 157 RGARRPASSAAQDDYARHVRDPPAVAVAAPKARASAPDA-VVTPPRLAVAPVPVLPAASA 215
RG+ P+SS++ ++ + P + + +S+ + TPP A AP+ + +AS
Sbjct: 115 RGSLTPSSSSSSSSPSQDTAETPCPLTSHVDSDSSSSHSRQETPPSAAAAPIITMESASG 174
Query: 216 AGDMSNPGSRRNG----PVKLHLTGI 237
G + P RR+ P L TGI
Sbjct: 175 FGPTTPPQRRRSSAQSYPPLLPFTGI 200
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,624,545
Number of Sequences: 37866
Number of extensions: 556855
Number of successful extensions: 3886
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 3658
Number of HSP's gapped (non-prelim): 453
length of query: 280
length of database: 18,247,518
effective HSP length: 101
effective length of query: 179
effective length of database: 14,423,052
effective search space: 2581726308
effective search space used: 2581726308
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.