Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CDK5R2 Sequence: fasta or formatted (367aa) NCBI GI: 4502739
Description:

cyclin-dependent kinase 5, regulatory subunit 2

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         42           4
 C cysteine            2.2          8           1
 D aspartate           3.5         13           1
 E glutamate           4.6         17           2
 F phenylalanine       2.7         10           2
 G glycine            11.2         41           3
 H histidine           0.5          2           1
 I isoleucine          1.4          5           1
 K lysine              6.3         23           4
 L leucine            10.6         39           3
 M methionine          1.1          4           1
 N asparagine          1.9          7           1
 P proline            12.0         44           7
 Q glutamine           3.8         14           2
 R arginine            7.1         26           2
 S serine              7.4         27           2
 T threonine           3.5         13           1
 V valine              5.4         20           1
 W tryptophan          1.4          5           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin-dependent kinase 5, regulatory subunit 2 [Homo... 
CDK5R1                0.350   cyclin-dependent kinase 5, regulatory subunit 1 [Homo...
ENAH                  0.037   enabled homolog isoform a 
ENAH                  0.037   enabled homolog isoform b 
TAF4                  0.037   TBP-associated factor 4 
PRB2                  0.036   proline-rich protein BstNI subfamily 2 
FMN1                  0.034   formin 1 
INF2                  0.034   inverted formin 2 isoform 2 
INF2                  0.034   inverted formin 2 isoform 1 
FMNL2                 0.034   formin-like 2 
SHANK1                0.033   SH3 and multiple ankyrin repeat domains 1 
WAS                   0.033   Wiskott-Aldrich syndrome protein 
CEL                   0.032   carboxyl ester lipase precursor 
WASL                  0.032   Wiskott-Aldrich syndrome gene-like protein 
DIAPH1                0.032   diaphanous 1 isoform 2 
DIAPH1                0.032   diaphanous 1 isoform 1 
PRB1                  0.032   proline-rich protein BstNI subfamily 1 isoform 1 pre...
LOC645529             0.030   PREDICTED: similar to Putative acrosin-like proteas...
NACA                  0.030   nascent polypeptide-associated complex alpha subuni...
FMNL1                 0.030   formin-like 1 
RXRB                  0.029   retinoid X receptor, beta 
VASP                  0.029   vasodilator-stimulated phosphoprotein 
ACR                   0.029   acrosin precursor 
CIC                   0.029   capicua homolog 
SFPQ                  0.029   splicing factor proline/glutamine rich (polypyrimidin...
PRB1                  0.029   proline-rich protein BstNI subfamily 1 isoform 2 pre...
SOBP                  0.029   sine oculis binding protein homolog 
TNRC6B                0.027   trinucleotide repeat containing 6B isoform 3 
DSCAML1               0.027   Down syndrome cell adhesion molecule like 1 
PAK4                  0.027   p21-activated kinase 4 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press