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Search of human proteins with 239756547
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756547 PREDICTED: hypothetical protein [Homo sapiens]
(240 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756547 PREDICTED: hypothetical protein [Homo sapiens] 503 e-143
gi|169210434 PREDICTED: hypothetical protein [Homo sapiens] 371 e-103
gi|55770854 N-methyl-D-aspartate receptor subunit 2C precursor [... 45 4e-05
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 45 7e-05
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 45 7e-05
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 44 1e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 43 2e-04
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 43 3e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 42 4e-04
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 42 5e-04
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 42 6e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 42 6e-04
gi|18959210 WIRE protein [Homo sapiens] 42 6e-04
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169179422 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 41 0.001
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 41 0.001
gi|160707881 formin 2 [Homo sapiens] 40 0.001
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|48762934 alpha 2 type I collagen [Homo sapiens] 39 0.003
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 39 0.003
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 39 0.003
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 39 0.003
gi|163965366 nascent polypeptide-associated complex alpha subuni... 39 0.003
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 39 0.004
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 39 0.004
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 39 0.005
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 39 0.005
gi|182765480 chromosome 6 open reading frame 186 [Homo sapiens] 38 0.007
>gi|239756547 PREDICTED: hypothetical protein [Homo sapiens]
Length = 240
Score = 503 bits (1296), Expect = e-143
Identities = 240/240 (100%), Positives = 240/240 (100%)
Query: 1 MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSGPPASGAPKT 60
MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSGPPASGAPKT
Sbjct: 1 MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSGPPASGAPKT 60
Query: 61 PTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGV 120
PTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGV
Sbjct: 61 PTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGV 120
Query: 121 RHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHTD 180
RHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHTD
Sbjct: 121 RHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHTD 180
Query: 181 ADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETITQ 240
ADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETITQ
Sbjct: 181 ADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETITQ 240
>gi|169210434 PREDICTED: hypothetical protein [Homo sapiens]
Length = 301
Score = 371 bits (952), Expect = e-103
Identities = 204/301 (67%), Positives = 208/301 (69%), Gaps = 61/301 (20%)
Query: 1 MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRS---------- 50
MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRS
Sbjct: 1 MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSDSHPTQRARR 60
Query: 51 ---------------------GPPAS---------GAPKTPTPPNVRAGRG-------RG 73
G PA GA K RA +G RG
Sbjct: 61 AGEGPARARLEAERAGCAHGPGAPARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRG 120
Query: 74 PRVRG-------WRRSEPAARTAQGLPPEPEPTHTRVAG-------LGSSQPSWEGELWG 119
P G + R+ A+RT G P E R G SQPSWEGELWG
Sbjct: 121 PAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWEGELWG 180
Query: 120 VRHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHT 179
VRHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHT
Sbjct: 181 VRHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHT 240
Query: 180 DADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETIT 239
DADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETIT
Sbjct: 241 DADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETIT 300
Query: 240 Q 240
Q
Sbjct: 301 Q 301
>gi|55770854 N-methyl-D-aspartate receptor subunit 2C precursor [Homo
sapiens]
Length = 1233
Score = 45.4 bits (106), Expect = 4e-05
Identities = 41/129 (31%), Positives = 51/129 (39%), Gaps = 15/129 (11%)
Query: 13 GLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGR 72
G++S W G R PP P P+ RSGP S TP PP + G
Sbjct: 908 GVSSSLDRATRTIENWGGGRRAPP-----PSPCPTPRSGP--SPCLPTPDPPPEPSPTGW 960
Query: 73 GPRVRGWRRSEPAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGV------RHLVSL 126
GP G A G PP P P + V+ + S +P+WE W V RHL +
Sbjct: 961 GPPDGGRAALVRRAPQPPGRPPTPGPPLSDVSRV-SRRPAWEAR-WPVRTGHCGRHLSAS 1018
Query: 127 SLPASSGAC 135
P S C
Sbjct: 1019 ERPLSPARC 1027
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 44.7 bits (104), Expect = 7e-05
Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 18/114 (15%)
Query: 33 RDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGL 92
R PP R PP RP+ PP ++P P G P G R E A + G
Sbjct: 1146 RPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGT 1205
Query: 93 PPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSG-ACAPPPLPPRRG 145
TR +G SQPS + L G P +G + A P +PPR G
Sbjct: 1206 --------TRKDNIGRSQPSPQAGLAG---------PGPAGYSTARPTIPPRAG 1242
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 44.7 bits (104), Expect = 7e-05
Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 18/114 (15%)
Query: 33 RDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGL 92
R PP R PP RP+ PP ++P P G P G R E A + G
Sbjct: 1146 RPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGT 1205
Query: 93 PPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSG-ACAPPPLPPRRG 145
TR +G SQPS + L G P +G + A P +PPR G
Sbjct: 1206 --------TRKDNIGRSQPSPQAGLAG---------PGPAGYSTARPTIPPRAG 1242
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 44.3 bits (103), Expect = 1e-04
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 25/123 (20%)
Query: 35 PPSRARGPPGRPSLRSGPPAS--GAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGL 92
PPSR+R P R L + PP + G+P+ P PP A P V G AR A G
Sbjct: 44 PPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAA-----PHVLG-------ARVAAGP 91
Query: 93 PPEPEPTHTRVAGLG--SSQPSWEGELWGVRHLVSLSLPAS---------SGACAPPPLP 141
+H+RV+ G ++P G+ + + PAS S +PPP P
Sbjct: 92 THRLSASHSRVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPP 151
Query: 142 PRR 144
P R
Sbjct: 152 PSR 154
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 44.3 bits (103), Expect = 1e-04
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 25/123 (20%)
Query: 35 PPSRARGPPGRPSLRSGPPAS--GAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGL 92
PPSR+R P R L + PP + G+P+ P PP A P V G AR A G
Sbjct: 44 PPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAA-----PHVLG-------ARVAAGP 91
Query: 93 PPEPEPTHTRVAGLG--SSQPSWEGELWGVRHLVSLSLPAS---------SGACAPPPLP 141
+H+RV+ G ++P G+ + + PAS S +PPP P
Sbjct: 92 THRLSASHSRVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPP 151
Query: 142 PRR 144
P R
Sbjct: 152 PSR 154
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 43.1 bits (100), Expect = 2e-04
Identities = 45/140 (32%), Positives = 52/140 (37%), Gaps = 31/140 (22%)
Query: 35 PPSRARGPPGRPSLRSGPPASGA----PKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQ 90
PP R PP P G PA+ A P TP PP A R R + AA
Sbjct: 101 PPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPP 160
Query: 91 GL-PPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGPL 149
P +P P R A L + P+ PA+ A A PP PRR P
Sbjct: 161 SPGPAQPGPRAQRAAPLAAPPPA----------------PAAPPAVA-PPAGPRRAPPP- 202
Query: 150 LATAFAAFKLPWRLRLLPPP 169
A AA + P LPPP
Sbjct: 203 ---AVAAREPP-----LPPP 214
Score = 33.1 bits (74), Expect = 0.22
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 35 PPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQ--GL 92
PPS PG + R+ P A+ P PP V G RR+ P A A+ L
Sbjct: 159 PPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGP-------RRAPPPAVAAREPPL 211
Query: 93 PPEPEP 98
PP P+P
Sbjct: 212 PPPPQP 217
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 42.7 bits (99), Expect = 3e-04
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 33 RDPPSRARGPPGRPSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQ 90
R PP + +GPP + GPP G P+ P PP G+ +GP +G +S+ +AR+
Sbjct: 91 RSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPP----GKPQGPPAQGGSKSQ-SARSPP 145
Query: 91 GLPPEP 96
G P P
Sbjct: 146 GKPQGP 151
Score = 36.6 bits (83), Expect = 0.020
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 37 SRARGPPGRPSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPP 94
++ +GPP P GPP G P+ P PP G+ +GP +G + P R+ G P
Sbjct: 45 NKPQGPPPPPGKPQGPPPQGGNKPQGPPPP----GKPQGPPPQGDKSRSP--RSPPGKPQ 98
Query: 95 EPEP 98
P P
Sbjct: 99 GPPP 102
Score = 33.5 bits (75), Expect = 0.17
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 19/119 (15%)
Query: 34 DPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSE--PAARTAQG 91
+ PS G P PS P P+ P PP G+ +GP +G + + P QG
Sbjct: 27 ESPSLIAGNPQGPS----PQGGNKPQGPPPP---PGKPQGPPPQGGNKPQGPPPPGKPQG 79
Query: 92 LPPEPEPTHTRVAGLGSSQ--PSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGP 148
PP+ + + + + G Q P G+ G P G P PP + +GP
Sbjct: 80 PPPQGDKSRSPRSPPGKPQGPPPQGGKPQGP--------PPQGGNKPQGPPPPGKPQGP 130
Score = 33.1 bits (74), Expect = 0.22
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 33 RDPPSRARGPP---GRPSLRSGPPASGAPKTPTPPNVRAGRGRGP--RVRGWRRSEP 84
R PP + +GPP G PPA G P+ P P AG+ +GP +G R S P
Sbjct: 142 RSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP--PAGQPQGPPRPPQGGRPSRP 196
Score = 29.3 bits (64), Expect = 3.2
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 10/59 (16%)
Query: 39 ARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPE 97
AR PPG+P GPP PP G + P+ P A QG P P+
Sbjct: 141 ARSPPGKP---QGPPQQEGNNPQGPPPPAGGNPQQPQA-------PPAGQPQGPPRPPQ 189
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 42.4 bits (98), Expect = 4e-04
Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 36 PSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPE 95
P A+GP P + S PPAS + TPP A G GP G + P A T+ PP
Sbjct: 109 PVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGP---GPTPTPPPAVTS--APPG 163
Query: 96 PEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLP-PRRGEGP 148
P +G+ ++ P G P A P P P P++G GP
Sbjct: 164 APPPTPPSSGVPTTPPQAGG-------------PPPPPAAVPGPGPGPKQGPGP 204
Score = 40.0 bits (92), Expect = 0.002
Identities = 34/123 (27%), Positives = 40/123 (32%), Gaps = 18/123 (14%)
Query: 35 PPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLP- 93
PP+ + PP P PP SG TPTPP G + P + G+P
Sbjct: 125 PPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPG--------APPPTPPSSGVPT 176
Query: 94 -------PEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAP--PPLPPRR 144
P P P G G Q G G + G P P PP R
Sbjct: 177 TPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHR 236
Query: 145 GEG 147
G G
Sbjct: 237 GGG 239
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 42.0 bits (97), Expect = 5e-04
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 19/115 (16%)
Query: 38 RARGPPGRPSLRSGPPASGAP---KTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPP 94
R + PP P R GPP P P PP R GRG P P +R PP
Sbjct: 273 RRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPAR-GRGAPP--------PPPSRAPTAAPP 323
Query: 95 EPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGPL 149
P P+ VA P ++ +LP+S+ + PPP P G GP+
Sbjct: 324 PPPPSRPSVA----VPPPPPNRMYPP---PPPALPSSAPSGPPPPPPSVLGVGPV 371
Score = 33.5 bits (75), Expect = 0.17
Identities = 35/120 (29%), Positives = 45/120 (37%), Gaps = 32/120 (26%)
Query: 30 TGHRDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPA-ART 88
+G PP+R RG P P R+ P A+ P P+ P+V P R + PA +
Sbjct: 297 SGPPPPPARGRGAPPPPPSRA-PTAAPPPPPPSRPSVAV--PPPPPNRMYPPPPPALPSS 353
Query: 89 AQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGP 148
A PP P P+ V G+G P PPP PP GP
Sbjct: 354 APSGPPPPPPS---VLGVGPVAP-------------------------PPPPPPPPPPGP 385
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 41.6 bits (96), Expect = 6e-04
Identities = 48/160 (30%), Positives = 59/160 (36%), Gaps = 46/160 (28%)
Query: 23 ELASFWATGHRDP--PSRARGPPGRPSLRSGPPASGAPKTPTPP-----NVRAGRGRGPR 75
+LA F A P PS + PP P A G+P PTP AG G +
Sbjct: 861 QLAGFSAPAGLSPLLPSSSSSPP--------PGACGSPSAPTPSAGVAATTIAGFGHFHK 912
Query: 76 VRGWRRS----------EPAARTAQGLPPEPEPTHTRVAGLG---------------SSQ 110
G S +P AR+ Q P P P R GLG SS
Sbjct: 913 ALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGAR-GGLGLPEHFLPPPPSSRSPSSS 971
Query: 111 PSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGPLL 150
P G+ G LSL ++G + P PPR+ E P L
Sbjct: 972 PGQLGQPPG-----ELSLGLATGPLSTPETPPRQPEPPSL 1006
Score = 35.0 bits (79), Expect = 0.058
Identities = 40/131 (30%), Positives = 49/131 (37%), Gaps = 33/131 (25%)
Query: 35 PPSRARGPPGRPSLRSGPP-------ASGA-------PKTPTPPNVRAGRGRGPRVRGWR 80
PP +R P P PP A+G P+ P PP++ AG G
Sbjct: 961 PPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGG------- 1013
Query: 81 RSEPAARTAQG--LPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPP 138
+ P T +G PP P R S+ P G H L PASS PP
Sbjct: 1014 -ASPVGFTPRGGLSPPGHSPGPPRT--FPSAPPRASGS-----HGSLLLPPASSPP--PP 1063
Query: 139 PLPPRRGEGPL 149
+P RRG PL
Sbjct: 1064 QVPQRRGTPPL 1074
Score = 34.7 bits (78), Expect = 0.076
Identities = 43/145 (29%), Positives = 54/145 (37%), Gaps = 20/145 (13%)
Query: 23 ELASFWATGHRDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGP-RVRGWRR 81
EL+ ATG P P PSL +G +P TP + G P R +
Sbjct: 981 ELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPS 1040
Query: 82 SEPAARTAQG---LPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPA-------- 130
+ P A + G LPP P +V + P G L L+S S PA
Sbjct: 1041 APPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDGAQT 1100
Query: 131 -------SSG-ACAPPPLPPRRGEG 147
SSG + A PL PR G G
Sbjct: 1101 LRRASPHSSGESMAAFPLFPRAGGG 1125
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 41.6 bits (96), Expect = 6e-04
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 22/117 (18%)
Query: 37 SRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEP 96
++++GPP RP GPP G ++ PP G+ GP +G +S QG PP P
Sbjct: 150 NQSQGPPPRPGKPEGPPPQGGNQSQGPP-PHPGKPEGPPPQGGNQS-------QGPPPRP 201
Query: 97 -EPTHTRVAGLGSSQ--PSWEGELWGVRHLVSLSLPASSGACAP--PPLPPRRGEGP 148
+P G SQ P G+ G P S G P PP P + +GP
Sbjct: 202 GKPEGPPPQGGNQSQGPPPRPGKPEG---------PPSQGGNKPQGPPPHPGKPQGP 249
Score = 38.9 bits (89), Expect = 0.004
Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 37 SRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEP 96
++++GPP RP GPP G ++ PP R G+ G +G +S QG PP P
Sbjct: 66 NQSQGPPPRPGKPEGPPPQGGNQSQGPP-PRPGKPEGQPPQGGNQS-------QGPPPRP 117
Query: 97 -EPTHTRVAGLGSSQ--PSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGP 148
+P G SQ P G+ G P PP P + EGP
Sbjct: 118 GKPEGPPPQGGNQSQGPPPRPGKPEG-------PPPQGGNQSQGPPPRPGKPEGP 165
Score = 38.5 bits (88), Expect = 0.005
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 24/109 (22%)
Query: 37 SRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEP 96
++++GPP RP GPP+ G K PP G+ +GP + ++P G P P
Sbjct: 213 NQSQGPPPRPGKPEGPPSQGGNKPQGPP-PHPGKPQGPPPQ--EGNKPQRPPPPGRPQGP 269
Query: 97 EPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRG 145
P G QP LP +G PP PP+ G
Sbjct: 270 PP-----PGGNPQQP----------------LPPPAGKPQGPPPPPQGG 297
Score = 37.0 bits (84), Expect = 0.015
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 42 PPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPE 95
PPGRP + PP G P+ P PP +G P +G R P QG PP+
Sbjct: 262 PPGRP--QGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRP----PQGQPPQ 309
Score = 35.8 bits (81), Expect = 0.034
Identities = 35/126 (27%), Positives = 46/126 (36%), Gaps = 28/126 (22%)
Query: 36 PSRARGPP--GRPSLRSGPPASGAPKTPTP--------PNVRAGRGRGPRVRGWRRSEPA 85
P + GPP G + PP G P+ P P P R G+ GP +G +S
Sbjct: 159 PGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQS--- 215
Query: 86 ARTAQGLPP---EPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPP 142
QG PP +PE ++ P G+ G P G P PP
Sbjct: 216 ----QGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGP--------PPQEGNKPQRPPPP 263
Query: 143 RRGEGP 148
R +GP
Sbjct: 264 GRPQGP 269
Score = 32.0 bits (71), Expect = 0.49
Identities = 26/82 (31%), Positives = 30/82 (36%), Gaps = 23/82 (28%)
Query: 35 PPSRAR--------------GPPGRPSLRSGPP--ASGAPKTPTPPNVRAGRGRGPRVRG 78
PP R GPP P GPP P+ P PP GR +GP G
Sbjct: 218 PPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPP----GRPQGPPPPG 273
Query: 79 WRRSE---PAARTAQGLPPEPE 97
+ P A QG PP P+
Sbjct: 274 GNPQQPLPPPAGKPQGPPPPPQ 295
Score = 28.5 bits (62), Expect = 5.4
Identities = 34/120 (28%), Positives = 42/120 (35%), Gaps = 25/120 (20%)
Query: 40 RGPPGRPSLRSGPPASGAPKTPTP--------PNVRAGRGRGPRVRGWRRSEPAARTAQG 91
R P G + PP G P+ P P R G+ GP +G +S QG
Sbjct: 39 RRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQS-------QG 91
Query: 92 LPPEP-EPTHTRVAGLGSSQ--PSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGP 148
PP P +P G SQ P G+ G P PP P + EGP
Sbjct: 92 PPPRPGKPEGQPPQGGNQSQGPPPRPGKPEG-------PPPQGGNQSQGPPPRPGKPEGP 144
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 41.6 bits (96), Expect = 6e-04
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 33 RDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGL 92
RDPPSR PP P + +GA P PP G P RG + P +RT G
Sbjct: 316 RDPPSRGAAPPPPPPVIR----NGARDAPPPPPPYRMHGSEPPSRG-KPPPPPSRTPAGP 370
Query: 93 PPEPEP 98
PP P P
Sbjct: 371 PPPPPP 376
Score = 37.4 bits (85), Expect = 0.012
Identities = 40/130 (30%), Positives = 47/130 (36%), Gaps = 26/130 (20%)
Query: 35 PPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGW--------------R 80
PP R PPG P+ S P AP+ P N + GP VRG
Sbjct: 251 PPPPYRQPPGVPNGPSSPTNESAPELPQRHNSLHRKTPGP-VRGLAPPPPTSASPSLLSN 309
Query: 81 RSEPAAR--TAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPP 138
R P AR ++G P P P R + P + G S P S G PP
Sbjct: 310 RPPPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHG-------SEPPSRG--KPP 360
Query: 139 PLPPRRGEGP 148
P P R GP
Sbjct: 361 PPPSRTPAGP 370
Score = 36.6 bits (83), Expect = 0.020
Identities = 38/120 (31%), Positives = 45/120 (37%), Gaps = 18/120 (15%)
Query: 31 GHRDPPSR--ARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRG--RGPRVRGWRRSEPAA 86
G PP+ + PP ++R+GP SG P PP R G GP S P
Sbjct: 220 GREGPPAPPPVKPPPSPVNIRTGP--SGQSLAPPPPPYRQPPGVPNGP-------SSPTN 270
Query: 87 RTAQGLPPEPEPTHTR----VAGLGSSQP-SWEGELWGVRHLVSLSLPASSGACAPPPLP 141
+A LP H + V GL P S L R P S GA PPP P
Sbjct: 271 ESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAPPPPPP 330
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 40.8 bits (94), Expect = 0.001
Identities = 59/204 (28%), Positives = 71/204 (34%), Gaps = 34/204 (16%)
Query: 11 AEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLR-SGPPA---SGAPKTPTPPNV 66
A G R + S +TG R P+ +R PG+P+ R S PPA G + V
Sbjct: 259 ARGHGGVQRQRFSAPSSHSTGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLV 318
Query: 67 RAGRGRGPRVRGWRRSEPAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSL 126
+GRG G TH GS P G L GV H L
Sbjct: 319 GSGRGSG-------------------VTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPL 359
Query: 127 SLPASSGACAPPPLPPRRGEGPLLAT-------AFAAFKLPWRLRLLPPPCLHCLFAQHT 179
S PA +PP P R GP L A A LP L P P H Q
Sbjct: 360 SSPAPQ---SPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPA-HDWGGQRC 415
Query: 180 DADGGWEKGQTLLPANRRCRSRGL 203
+ GG + A R R G+
Sbjct: 416 EGCGGGSQPFAGRRAERGKRGAGV 439
>gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]
Length = 645
Score = 40.8 bits (94), Expect = 0.001
Identities = 49/165 (29%), Positives = 62/165 (37%), Gaps = 15/165 (9%)
Query: 5 LSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSGPPASGAPKTPTPP 64
L+P + L S C A A D RA G G P L G AS P PP
Sbjct: 316 LTPNSPSSFLPSSFLLCLLPAPLTAAQPEDAGGRAPGEEGPPRLAVGLRASSCPIILDPP 375
Query: 65 NVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPE-PTHTRVAGLGSSQPSWEGELWGVRHL 123
GP G S RT+ P P+ P H +V+ ++ PS L
Sbjct: 376 GKLGTSLPGP---GANSSLREGRTSPSRPRLPQSPEHQQVSACTATWPSCR-----AAEL 427
Query: 124 VSLSLPASSGA--CAPPPLPPRRG-EGPLLATAFAAFKLPWRLRL 165
+ P+ G PPP P +G +GP T + L WR RL
Sbjct: 428 PASDSPSGWGTWLSTPPPYKPNKGLKGP---TRRSLGLLEWRSRL 469
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 26/118 (22%)
Query: 37 SRARGPPGRPSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGWRRSE--PAARTAQGL 92
++ +GPP P GPP G P+ P PP G+ +GP +G + + P QG
Sbjct: 45 NKPQGPPSPPGKPQGPPPQGGNQPQGPPPP---PGKPQGPPPQGGNKPQGPPPPGKPQGP 101
Query: 93 PPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAP--PPLPPRRGEGP 148
PP+ + + + + G Q P G P PP PP + +GP
Sbjct: 102 PPQGDKSRSPRSPPGKPQG-----------------PPPQGGNQPQGPPPPPGKPQGP 142
Score = 40.8 bits (94), Expect = 0.001
Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 29/129 (22%)
Query: 33 RDPPSRARGPPGR-----------PSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGW 79
R PP + +GPP + P GPP G P+ P PP G+ +GP +G
Sbjct: 174 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP----GKPQGPPPQGD 229
Query: 80 RRSEPAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPP 139
+S+ +AR+ G P P P G +QP G P G P
Sbjct: 230 NKSQ-SARSPPGKPQGPPPQ-------GGNQPQGPPPPPGKPQ----GPPPQGGNKPQGP 277
Query: 140 LPPRRGEGP 148
PP + +GP
Sbjct: 278 PPPGKPQGP 286
Score = 39.3 bits (90), Expect = 0.003
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 29/129 (22%)
Query: 33 RDPPSRARGPPGR-----------PSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGW 79
R PP + +GPP + P GPP G P+ P PP G+ +GP +G
Sbjct: 236 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP----GKPQGPPPQGG 291
Query: 80 RRSEPAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPP 139
+S ++R+ G P P P G +QP G P G P
Sbjct: 292 SKSR-SSRSPPGKPQGPPPQ-------GGNQPQGPPPPPGKPQ----GPPPQGGNKPQGP 339
Query: 140 LPPRRGEGP 148
PP + +GP
Sbjct: 340 PPPGKPQGP 348
Score = 38.9 bits (89), Expect = 0.004
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 29/129 (22%)
Query: 33 RDPPSRARGPPGR-----------PSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGW 79
R PP + +GPP + P GPP G P+ P PP G+ +GP +G
Sbjct: 112 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP----GKPQGPPPQGD 167
Query: 80 RRSEPAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPP 139
+S ++R+ G P P P G +QP G P G P
Sbjct: 168 NKSR-SSRSPPGKPQGPPPQ-------GGNQPQGPPPPPGKPQ----GPPPQGGNKPQGP 215
Query: 140 LPPRRGEGP 148
PP + +GP
Sbjct: 216 PPPGKPQGP 224
Score = 38.1 bits (87), Expect = 0.007
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 19/114 (16%)
Query: 37 SRARGPPGRPSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPP 94
++ +GPP P GPP G P+ P PP G+ +GP +G + P R+ G P
Sbjct: 66 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPP----GKPQGPPPQGDKSRSP--RSPPGKPQ 119
Query: 95 EPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGP 148
P P G +QP G P G P PP + +GP
Sbjct: 120 GPPPQ-------GGNQPQGPPPPPGKPQ----GPPPQGGNKPQGPPPPGKPQGP 162
Score = 36.2 bits (82), Expect = 0.026
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 18/77 (23%)
Query: 33 RDPPSRARGPPGR-----------PSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGW 79
R PP + +GPP + P GPP G P+ P PP G+ +GP +G
Sbjct: 298 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP----GKPQGPPPQGG 353
Query: 80 RRSEPAARTAQGLPPEP 96
+S +AR+ G P P
Sbjct: 354 SKSR-SARSPPGKPQGP 369
Score = 33.1 bits (74), Expect = 0.22
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 33 RDPPSRARGPP---GRPSLRSGPPASGAPKTPTPPNVRAGRGRGP--RVRGWRRSEP 84
R PP + +GPP G PPA G P+ P P AG+ +GP +G R S P
Sbjct: 360 RSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP--PAGQPQGPPRPPQGGRPSRP 414
Score = 29.3 bits (64), Expect = 3.2
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 10/59 (16%)
Query: 39 ARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPE 97
AR PPG+P GPP PP G + P+ P A QG P P+
Sbjct: 359 ARSPPGKP---QGPPQQEGNNPQGPPPPAGGNPQQPQA-------PPAGQPQGPPRPPQ 407
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 40.8 bits (94), Expect = 0.001
Identities = 42/136 (30%), Positives = 48/136 (35%), Gaps = 31/136 (22%)
Query: 37 SRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEP 96
SR PP RP+ GPP AP P+P VR RR + A G PP P
Sbjct: 708 SRHDPPPRRPAAPPGPPGPAAPPAPSP---------AAPVRTRRRRKLYELHAAGAPPPP 758
Query: 97 EPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAA 156
P H P+ E G SG+ + P L P R GP
Sbjct: 759 PPGHA---------PAPESPRPG------------SGSGSGPGLAPARSPGPAADGPIDL 797
Query: 157 FKLPWR-LRLLPPPCL 171
K P R L P P L
Sbjct: 798 SKKPRRPLPGAPAPAL 813
Score = 30.0 bits (66), Expect = 1.9
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 8/45 (17%)
Query: 35 PPSRARGPPGRPSLRSGPPAS--------GAPKTPTPPNVRAGRG 71
PP AR PPG+P+ P +S GA TP + GRG
Sbjct: 618 PPGPARAPPGQPAEPDAPRSSPGPGAREEGAGGAATPEDGAGGRG 662
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 40.4 bits (93), Expect = 0.001
Identities = 47/176 (26%), Positives = 55/176 (31%), Gaps = 25/176 (14%)
Query: 35 PPSRARGPPGRPSLRSG-----PPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTA 89
PP G P P L PP GA P PP R G P + G P
Sbjct: 1111 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPG 1170
Query: 90 QGLPPEPE------PTHTRVAGLG------------SSQPSWEGELWGVRHLVSLSLPAS 131
G+PP P P + G+G P G G+ + LP
Sbjct: 1171 AGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPG--MGIPPAPAPPLPPP 1228
Query: 132 SGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHTDADGGWEK 187
PPPL P G L + P LPPP LF + D G K
Sbjct: 1229 GTGIPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRK 1284
Score = 33.9 bits (76), Expect = 0.13
Identities = 36/124 (29%), Positives = 40/124 (32%), Gaps = 29/124 (23%)
Query: 35 PPSRARGPPGRPSLRSG-----PPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTA 89
PP G P P L PP GA P PP AG P + G P
Sbjct: 1023 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1082
Query: 90 QGLPPEPE------PTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPR 143
G+PP P P + G+G P P GA PPP PP
Sbjct: 1083 AGIPPPPPLPGAGIPPPPPLPGVGIPPP-----------------PPLPGAGIPPP-PPL 1124
Query: 144 RGEG 147
G G
Sbjct: 1125 PGAG 1128
Score = 33.1 bits (74), Expect = 0.22
Identities = 35/118 (29%), Positives = 38/118 (32%), Gaps = 28/118 (23%)
Query: 35 PPSRARGPPGRPSLRSG-----PPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTA 89
PP G P P L PP GA P PP AG P + G P
Sbjct: 990 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1049
Query: 90 QGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEG 147
G+PP P + G G P P GA PPP PP G G
Sbjct: 1050 AGIPPPPP-----LPGAGIPPP-----------------PPLPGAGIPPP-PPLPGAG 1084
Score = 32.3 bits (72), Expect = 0.38
Identities = 35/118 (29%), Positives = 38/118 (32%), Gaps = 28/118 (23%)
Query: 35 PPSRARGPPGRPSLRSG-----PPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTA 89
PP G P P L PP GA P PP AG P + G P
Sbjct: 957 PPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1016
Query: 90 QGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEG 147
G+PP P + G G P P GA PPP PP G G
Sbjct: 1017 AGIPPPPP-----LPGAGIPPP-----------------PPLPGAGIPPP-PPLPGAG 1051
Score = 30.8 bits (68), Expect = 1.1
Identities = 29/96 (30%), Positives = 32/96 (33%), Gaps = 23/96 (23%)
Query: 52 PPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPEPTHTRVAGLGSSQP 111
PP GA P PP AG P + G P G+PP P + G G P
Sbjct: 946 PPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPP-----LPGAGIPPP 1000
Query: 112 SWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEG 147
P GA PPP PP G G
Sbjct: 1001 -----------------PPLPGAGIPPP-PPLPGAG 1018
Score = 30.0 bits (66), Expect = 1.9
Identities = 34/118 (28%), Positives = 37/118 (31%), Gaps = 28/118 (23%)
Query: 35 PPSRARGPPGRPSLRSG-----PPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTA 89
PP G P P L PP GA P PP A P + G P
Sbjct: 913 PPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPG 972
Query: 90 QGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEG 147
G+PP P + G G P P GA PPP PP G G
Sbjct: 973 AGIPPPPP-----LPGAGIPPP-----------------PPLPGAGIPPP-PPLPGAG 1007
Score = 30.0 bits (66), Expect = 1.9
Identities = 34/118 (28%), Positives = 39/118 (33%), Gaps = 17/118 (14%)
Query: 35 PPSRARGPPGRPSLRSG-----PPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTA 89
PP G P P L PP GA P PP G P + G P
Sbjct: 1067 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPG 1126
Query: 90 QGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEG 147
G+PP P + G G P + + P GA PPP PP G G
Sbjct: 1127 AGIPPPPP-----LPGAGIPPPP------PLPRVGIPPPPPLPGAGIPPP-PPLPGAG 1172
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 40.0 bits (92), Expect = 0.002
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 36 PSRARGPPGRPSLRSGPPASGAPKT----PTPPNVRAGRGRGPRVRGWRRSEPAARTAQG 91
P+R PP RPSL SGP P + P PP R +G + P +R G
Sbjct: 118 PARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARP-LPQGSVTAREQEQRPRSRRRAG 176
Query: 92 LPPEPEPTHTRVAGLGSSQPSW 113
P P TR+ + S+ SW
Sbjct: 177 APEALGPALTRIHNVEGSKDSW 198
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 39.3 bits (90), Expect = 0.003
Identities = 28/78 (35%), Positives = 30/78 (38%), Gaps = 12/78 (15%)
Query: 31 GHRDPPSRA--RGPPGRPSLRSGPPASGAPKTP------TPPNVRAGRG----RGPRVRG 78
G R P A GPPG P LR P + G P PP R G RGP
Sbjct: 379 GKRGPNGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDA 438
Query: 79 WRRSEPAARTAQGLPPEP 96
R EP +GLP P
Sbjct: 439 GRPGEPGLMGPRGLPGSP 456
Score = 31.2 bits (69), Expect = 0.84
Identities = 33/122 (27%), Positives = 43/122 (35%), Gaps = 22/122 (18%)
Query: 40 RGPPGRPSLRSGPPASGAPKTPTPPNVRA-----GRGRGPRVRGWRRSE-------PAAR 87
+G PG P ++ P A G TP R GR P G R S+ PA
Sbjct: 189 KGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGP 248
Query: 88 TAQ----GLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPR 143
G P P P + +G++ P+ G + LP SG PP P
Sbjct: 249 IGSAGPPGFPGAPGP-KGEIGAVGNAGPAGPAGPRG-----EVGLPGLSGPVGPPGNPGA 302
Query: 144 RG 145
G
Sbjct: 303 NG 304
Score = 30.0 bits (66), Expect = 1.9
Identities = 45/147 (30%), Positives = 49/147 (33%), Gaps = 47/147 (31%)
Query: 36 PSRARGPPGRPSL-----RSGPPASGAPKTPTPPNV-----------RAGRGRGPRVRGW 79
P RGPPG P +GPP G P P PP + G G GP
Sbjct: 40 PRGERGPPGPPGRDGEDGPTGPP--GPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMG 97
Query: 80 RRSEPAARTA------QGLPPEP-EPTHTRVAGL-GSSQPSWEGELWGVRHLVSLSLPAS 131
R P A A QG EP EP T AG G + P P
Sbjct: 98 PRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGP-----------------PGK 140
Query: 132 SGACAPPPLPPRRGE----GPLLATAF 154
+G P P R GE GP A F
Sbjct: 141 AGEDGHPGKPGRPGERGVVGPQGARGF 167
Score = 29.6 bits (65), Expect = 2.4
Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 14/90 (15%)
Query: 29 ATGHRDPPSRAR-----GPPGRPSLRS--GPP-ASGAPKTPTPPNVRAGRGRGPRVRGWR 80
A G PP +A G PGRP R GP A G P TP P + RG
Sbjct: 131 ARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNG--LDGL 188
Query: 81 RSEPAARTAQGLPPEP----EPTHTRVAGL 106
+ +P A +G P P P T GL
Sbjct: 189 KGQPGAPGVKGEPGAPGENGTPGQTGARGL 218
Score = 29.3 bits (64), Expect = 3.2
Identities = 39/128 (30%), Positives = 48/128 (37%), Gaps = 17/128 (13%)
Query: 36 PSRARGPPGRPSL--------RSGPPA----SGAPKTPTPPNVRAGRG-RGPRVRGWRRS 82
P+ +RG G P + R+GPP SG P P P RG RG + R
Sbjct: 773 PAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTG 832
Query: 83 EPAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPP 142
E A G E P+ P +G L G + L LP S G P +
Sbjct: 833 EVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQG-LLGAPGI--LGLPGSRGERGLPGVAG 889
Query: 143 RRGE-GPL 149
GE GPL
Sbjct: 890 AVGEPGPL 897
Score = 28.1 bits (61), Expect = 7.1
Identities = 35/117 (29%), Positives = 40/117 (34%), Gaps = 13/117 (11%)
Query: 41 GPPGRPSLRSGPPASGAPKTPTPPNVRAGRG-RGPRVRGWRRSEPAARTAQGLPPEPEPT 99
G PGR R P A GAP R G GP R P R G P P
Sbjct: 667 GNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVG-PAGPNGF 725
Query: 100 HTRVAGLGSSQPSWEGELW-----GVRHLVSLSLPASSGACAPPPLPP----RRGEG 147
G QP +GE G +V + P + A P PP RG+G
Sbjct: 726 AGPAGAAG--QPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDG 780
>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
Length = 1669
Score = 39.3 bits (90), Expect = 0.003
Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 13/117 (11%)
Query: 41 GPPGRPSL--RSGPPAS-GAPKTPTPPNVRAGRG-------RGPRVRGWRRSEPAARTAQ 90
G PG P L R GP G P PP + G G RG R EP +
Sbjct: 305 GEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGPKGFP 364
Query: 91 GLPPEPEPTHTRVAGLGSSQPSWEGELW--GVRHLVSLSLPASSGACAPPPLPPRRG 145
GLP +P P V G + P + GE G R SLP SG P P G
Sbjct: 365 GLPGQPGPPGLPVPGQAGA-PGFPGERGEKGDRGFPGTSLPGPSGRDGLPGPPGSPG 420
Score = 34.7 bits (78), Expect = 0.076
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 20/103 (19%)
Query: 41 GPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPEPTH 100
G PG P L+ P + G P +P P + +G P + G P + GLP P PT
Sbjct: 1091 GMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGL-PGLDG----IPGVKGEAGLPGTPGPTG 1145
Query: 101 TRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPR 143
AG +P +G +P S+G P LP R
Sbjct: 1146 P--AG-QKGEPGSDG------------IPGSAGEKGEPGLPGR 1173
Score = 32.3 bits (72), Expect = 0.38
Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 27/116 (23%)
Query: 31 GHR-DPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTA 89
GH + P RGP G+P L P G P P V+ +G GW P A
Sbjct: 1228 GHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGVKGDKGN----PGW----PGAPGV 1279
Query: 90 QGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRG 145
G P+ +P + G+G S + S G PP +P +G
Sbjct: 1280 PG--PKGDPGFQGMPGIGGSP----------------GITGSKGDMGPPGVPGFQG 1317
Score = 31.6 bits (70), Expect = 0.64
Identities = 33/116 (28%), Positives = 39/116 (33%), Gaps = 13/116 (11%)
Query: 31 GHRDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRG-RGPRVRGWRRSEPAARTA 89
G R PP A G PG P L P G P P P +G RGP P
Sbjct: 91 GTRGPPG-ASGYPGNPGLPGIPGQDGPPGPPGIPGCNGTKGERGP------LGPPGLPGF 143
Query: 90 QGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRG 145
G P P + G+ G + G+ P G PP LP +G
Sbjct: 144 AGNPGPP-----GLPGMKGDPGEILGHVPGMLLKGERGFPGIPGTPGPPGLPGLQG 194
Score = 31.2 bits (69), Expect = 0.84
Identities = 34/122 (27%), Positives = 43/122 (35%), Gaps = 14/122 (11%)
Query: 39 ARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEP-- 96
A GPPG +R P G P + P V G GP R P + GL P
Sbjct: 771 AIGPPGLQGIRGEPGPPGLPGSVGSPGV---PGIGP---PGARGPPGGQGPPGLSGPPGI 824
Query: 97 --EPTHTRVAGLGSSQPSWEGELWGVRHLVSLS----LPASSGACAPPPLPPRRGEGPLL 150
E GL P + G+ + S LP GA P P +GE ++
Sbjct: 825 KGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVM 884
Query: 151 AT 152
T
Sbjct: 885 GT 886
Score = 30.4 bits (67), Expect = 1.4
Identities = 36/111 (32%), Positives = 44/111 (39%), Gaps = 20/111 (18%)
Query: 41 GPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTA--QGLPPEPEP 98
GPPG + P G P TP P G P V+G ++ EP +GLP P
Sbjct: 693 GPPGPKGVDGLPGDMGPPGTPGRPGFNGLPGN-PGVQG-QKGEPGVGLPGLKGLPGLPGI 750
Query: 99 THTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGE-GP 148
T P +G + GV +P GA PP L RGE GP
Sbjct: 751 PGT---------PGEKGSI-GVP-----GVPGEHGAIGPPGLQGIRGEPGP 786
Score = 28.9 bits (63), Expect = 4.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 41 GPPGRPSLRS--GPPA-SGAPKTPTPPNVRAGRGR 72
GPPG P L+ GPP +G P P PP +G+
Sbjct: 185 GPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQ 219
Score = 28.9 bits (63), Expect = 4.2
Identities = 28/111 (25%), Positives = 38/111 (34%), Gaps = 1/111 (0%)
Query: 36 PSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPE 95
P A G PG P G P TP P + +G + P + GLP +
Sbjct: 647 PPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGD 706
Query: 96 PEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGE 146
P T + P G + G + + LP G P +P GE
Sbjct: 707 MGPPGTPGRPGFNGLPGNPG-VQGQKGEPGVGLPGLKGLPGLPGIPGTPGE 756
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 39.3 bits (90), Expect = 0.003
Identities = 34/120 (28%), Positives = 43/120 (35%), Gaps = 28/120 (23%)
Query: 40 RGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPE-P 98
RGPPG P + P G P P P + RG P ++G + +G P +P P
Sbjct: 812 RGPPGEPGEKGVPGKEGVPGKPGEPGFKGERG-DPGIKG----DKGPPGGKGQPGDPGIP 866
Query: 99 THTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAP------PPLPPRRGEGPLLAT 152
H GL Q LP +G P P P RGE P + T
Sbjct: 867 GHKGHTGLMGPQ----------------GLPGENGPVGPPGPPGQPGFPGLRGESPSMET 910
Score = 30.0 bits (66), Expect = 1.9
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Query: 29 ATGHRDPPSRA-----RGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGR----GPRVRGW 79
A G PP RG PG+ R A+G +P P R G GP +G
Sbjct: 408 APGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKG- 466
Query: 80 RRSEPAARTAQGLP 93
+ EP R + GLP
Sbjct: 467 KDGEPGLRGSPGLP 480
Score = 27.7 bits (60), Expect = 9.2
Identities = 29/123 (23%), Positives = 43/123 (34%), Gaps = 6/123 (4%)
Query: 33 RDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRG-RGPRVRGWRRSEPAARTAQG 91
+D + GP G R P +G+P +P P G +G + P +G
Sbjct: 754 KDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRG 813
Query: 92 LPPEP----EPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEG 147
P EP P V G +P ++GE P G P +P +G
Sbjct: 814 PPGEPGEKGVPGKEGVPG-KPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGHT 872
Query: 148 PLL 150
L+
Sbjct: 873 GLM 875
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 39.3 bits (90), Expect = 0.003
Identities = 34/120 (28%), Positives = 43/120 (35%), Gaps = 28/120 (23%)
Query: 40 RGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPE-P 98
RGPPG P + P G P P P + RG P ++G + +G P +P P
Sbjct: 1365 RGPPGEPGEKGVPGKEGVPGKPGEPGFKGERG-DPGIKG----DKGPPGGKGQPGDPGIP 1419
Query: 99 THTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAP------PPLPPRRGEGPLLAT 152
H GL Q LP +G P P P RGE P + T
Sbjct: 1420 GHKGHTGLMGPQ----------------GLPGENGPVGPPGPPGQPGFPGLRGESPSMET 1463
Score = 32.3 bits (72), Expect = 0.38
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 15/71 (21%)
Query: 40 RGPPGRPSLRSGPPASGA----------PKTPTPPNVRAGRGR----GPRVRGWRRSEPA 85
+GPPG P + GPP G P P PP G+ GP + EP
Sbjct: 713 QGPPGPPGV-PGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGPNGPPGPPGTKGEPG 771
Query: 86 ARTAQGLPPEP 96
R GLP +P
Sbjct: 772 ERGEDGLPGKP 782
Score = 30.0 bits (66), Expect = 1.9
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Query: 29 ATGHRDPPSRA-----RGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGR----GPRVRGW 79
A G PP RG PG+ R A+G +P P R G GP +G
Sbjct: 926 APGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKG- 984
Query: 80 RRSEPAARTAQGLP 93
+ EP R + GLP
Sbjct: 985 KDGEPGLRGSPGLP 998
Score = 28.5 bits (62), Expect = 5.4
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 31 GHRDPPSR--ARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRG-RGPRVRGWRRSEPAAR 87
G PP + GPPG P + P G P P +R G +G R + E
Sbjct: 747 GPTGPPGKDGPNGPPGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLP 806
Query: 88 TAQGLP 93
A G P
Sbjct: 807 GAPGFP 812
Score = 27.7 bits (60), Expect = 9.2
Identities = 29/123 (23%), Positives = 43/123 (34%), Gaps = 6/123 (4%)
Query: 33 RDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRG-RGPRVRGWRRSEPAARTAQG 91
+D + GP G R P +G+P +P P G +G + P +G
Sbjct: 1307 KDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRG 1366
Query: 92 LPPEP----EPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEG 147
P EP P V G +P ++GE P G P +P +G
Sbjct: 1367 PPGEPGEKGVPGKEGVPG-KPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGHT 1425
Query: 148 PLL 150
L+
Sbjct: 1426 GLM 1428
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 39.3 bits (90), Expect = 0.003
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 18/124 (14%)
Query: 36 PSRARGPPGRPSLRSGPPASGAPKTP--TPPNVRAGRGR-GPRVRGWRRSEPAAR--TAQ 90
P +AR P + + P GAP P TPP+ + G P+ W + PAA + +
Sbjct: 918 PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPK---WAPTPPAATPPSPK 974
Query: 91 GLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGPLL 150
G P P P ++ PS +G + P+ GA PP + P +G
Sbjct: 975 GGPATPSPKGAPTPP-AATPPSPKG---------GPATPSPKGAPTPPAVTPPSPKGSPA 1024
Query: 151 ATAF 154
AT F
Sbjct: 1025 ATPF 1028
Score = 33.5 bits (75), Expect = 0.17
Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 24/123 (19%)
Query: 35 PPSRARGPPGRPSLRSGPPASGAPKTP--TPPNVRAGRGRGPRVRGWRRSEPAARTAQGL 92
P + A PP + PP GAP TP TPP+ + G P + A T
Sbjct: 1126 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPP-------PKGAPTTPAAT 1178
Query: 93 PPEPEPTHTRVAGLG------SSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGE 146
PP P+ + G ++ PS +G L+ P+ GA P P +
Sbjct: 1179 PPSPKGGLATPSPKGAPTTPAATPPSPKG---------GLATPSPKGAPTTPAATPPSPK 1229
Query: 147 GPL 149
G L
Sbjct: 1230 GGL 1232
Score = 33.1 bits (74), Expect = 0.22
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 27/124 (21%)
Query: 32 HRDPPSRARGPPGRPSLRSGP---PASGAPKTP--TPPNVRAGRGRGPRVRGWRRSEPAA 86
H+ P+ A P PS + GP P GAP P TPP+ + G P + A
Sbjct: 1283 HKGAPNPAVVTP--PSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPP-------PKGAP 1333
Query: 87 RTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGE 146
PP P+ T T L ++ PS +G + P+S PP P
Sbjct: 1334 TPPAVTPPSPKGTPT----LPATTPSSKG---------GPTTPSSKEGPTPPAATPSHKG 1380
Query: 147 GPLL 150
GP +
Sbjct: 1381 GPAM 1384
Score = 32.7 bits (73), Expect = 0.29
Identities = 33/123 (26%), Positives = 44/123 (35%), Gaps = 24/123 (19%)
Query: 35 PPSRARGPPGRPSLRSGPPASGAPKTP--TPPNVRAGRGRGPRVRGWRRSEPAARTAQGL 92
P A PP + PP GAP TP TPP+ + G P + A T
Sbjct: 1103 PMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPP-------PKGAPTTPAAT 1155
Query: 93 PPEPE------PTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGE 146
PP P+ P ++ PS +G L+ P+ GA P P +
Sbjct: 1156 PPSPKGGLATPPPKGAPTTPAATPPSPKG---------GLATPSPKGAPTTPAATPPSPK 1206
Query: 147 GPL 149
G L
Sbjct: 1207 GGL 1209
Score = 32.7 bits (73), Expect = 0.29
Identities = 32/121 (26%), Positives = 44/121 (36%), Gaps = 24/121 (19%)
Query: 35 PPSRARGPPGRPSLRSGPPASGAPKTP--TPPNVRAGRGRGPRVRGWRRSEPAARTAQGL 92
P + A PP + PP GAP P TPP+++ G P + A A
Sbjct: 1241 PTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPH-------KGAPNPAVVT 1293
Query: 93 PPEPE------PTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGE 146
PP P+ P ++ PS +G S P GA PP + P +
Sbjct: 1294 PPSPKGGPATSPPKGAPTPPAATPPSPKG---------SPGTPPPKGAPTPPAVTPPSPK 1344
Query: 147 G 147
G
Sbjct: 1345 G 1345
Score = 32.7 bits (73), Expect = 0.29
Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 22/135 (16%)
Query: 42 PPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLP-PEPEPTH 100
P PS + GP + + PTPP GP + + P+ + +P P+ +PT
Sbjct: 1350 PATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAM-----TPPSPKRGPAIPSPKGDPTS 1404
Query: 101 TRVAGL-------------GSSQPSWEGELW--GVRHLVSLSLPASSGACAPPPLPPRRG 145
V L G++ PS +G+L V + PA+S P P +G
Sbjct: 1405 PAVIPLSPKKAPATPVTREGAATPS-KGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKG 1463
Query: 146 EGPLLATAFAAFKLP 160
+ L A + K P
Sbjct: 1464 DPTLPAVTPPSPKEP 1478
Score = 31.2 bits (69), Expect = 0.84
Identities = 32/113 (28%), Positives = 43/113 (38%), Gaps = 22/113 (19%)
Query: 35 PPSRARGPPGRPSLRSGPPASGAPKTP--TPPNVRAGRGRGPRVRGWRRSEPAARTAQGL 92
P + A PP + P GAP TP TPP+ + G PA +G
Sbjct: 1218 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG--------------PATPPPKGA 1263
Query: 93 PPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPP---PLPP 142
P P T + G G + P +G +V+ P A +PP P PP
Sbjct: 1264 PTPPAATPPSLKG-GLATPPHKGA--PNPAVVTPPSPKGGPATSPPKGAPTPP 1313
Score = 30.4 bits (67), Expect = 1.4
Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 19/115 (16%)
Query: 35 PPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRG----------WRRSEP 84
PPS P G P+ P + P TPP+ + P +G + P
Sbjct: 1016 PPS----PKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGP 1071
Query: 85 AARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPP 139
A + +G P P T G G + PS + G + + P+ G A PP
Sbjct: 1072 ATPSLKGAPTPPAATPPSPKG-GPATPSPK----GAPMPPAATPPSPKGGLATPP 1121
Score = 30.0 bits (66), Expect = 1.9
Identities = 28/105 (26%), Positives = 38/105 (36%), Gaps = 24/105 (22%)
Query: 35 PPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPP 94
PPS +G P PS + P P TPP+ + G P + A T PP
Sbjct: 1087 PPS-PKGGPATPSPKGAP----MPPAATPPSPKGGLATPPH-------KGAPTTPAATPP 1134
Query: 95 EPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPP 139
P+ GL + P G + + P+ G A PP
Sbjct: 1135 SPK------GGLATPPPK------GAPTTPAATPPSPKGGLATPP 1167
Score = 29.3 bits (64), Expect = 3.2
Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 35 PPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPP 94
PPS +G P PS + P P TPP+ + G PA + +G P
Sbjct: 970 PPS-PKGGPATPSPKGAP----TPPAATPPSPKGG--------------PATPSPKGAPT 1010
Query: 95 EPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLP 141
P T G ++ P + G + + P+ G+ A PLP
Sbjct: 1011 PPAVTPPSPKGSPAATPFPK----GASTPPAATPPSPKGSPAATPLP 1053
Score = 27.7 bits (60), Expect = 9.2
Identities = 43/188 (22%), Positives = 63/188 (33%), Gaps = 22/188 (11%)
Query: 53 PASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPEPTHTRVAGLGSSQPS 112
PA+ APK ++ + + R + PA+ + +G P P T G G + PS
Sbjct: 900 PATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKG-GPATPS 958
Query: 113 WEGELWGVRHLVSL--------SLPASSGACAPP-PLPPRRGEGPLLATAFAAFKLPWRL 163
W + + P+ GA PP PP GP + A
Sbjct: 959 ---PKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGA------- 1008
Query: 164 RLLPPPCLHCLFAQHTDADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRS 223
PP + + + A + KG + PA +G A TT T S
Sbjct: 1009 --PTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPS 1066
Query: 224 ESLSPARP 231
PA P
Sbjct: 1067 PKGGPATP 1074
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 38.9 bits (89), Expect = 0.004
Identities = 37/114 (32%), Positives = 42/114 (36%), Gaps = 15/114 (13%)
Query: 31 GHRDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQ 90
G R P + RGP GR S A P+ P P R P R R S AA
Sbjct: 51 GRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLAA---- 106
Query: 91 GLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSG-----ACAPPP 139
PEP+ P G R L SLS+ SSG +CAP P
Sbjct: 107 ---PEPQVGDWTSREGRRGGPCLPG---ARRRLFSLSVSRSSGPPRARSCAPHP 154
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 38.9 bits (89), Expect = 0.004
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 32/120 (26%)
Query: 33 RDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSE--PAARTAQ 90
R PP + +GPP P P+ P PP G+ +GP +G ++ + P Q
Sbjct: 152 RSPPGKPQGPP--------PQGGNQPQGPPPP---PGKPQGPPPQGGKKPQGPPPPGKPQ 200
Query: 91 GLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAP--PPLPPRRGEGP 148
G PP+ + + + + G Q P G P PP PP + +GP
Sbjct: 201 GPPPQGDKSRSSQSPPGKPQG-----------------PPPQGGNQPQGPPPPPGKPQGP 243
Score = 38.5 bits (88), Expect = 0.005
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 19/114 (16%)
Query: 37 SRARGPPGRPSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPP 94
++ +GPP P GPP G P+ P PP G+ +GP +G + P R+ G P
Sbjct: 45 NKPQGPPPPPGKPQGPPPQGGNKPQGPPPP----GKPQGPPPQGDKSRSP--RSPPGKPQ 98
Query: 95 EPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGP 148
P P G +QP G P G P PP + +GP
Sbjct: 99 GPPPQ-------GGNQPQGPPPPPGKPQ----GPPPQGGNRPQGPPPPGKPQGP 141
Score = 38.5 bits (88), Expect = 0.005
Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 32/120 (26%)
Query: 33 RDPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSE--PAARTAQ 90
R PP + +GPP P P+ P PP G+ +GP +G R + P Q
Sbjct: 91 RSPPGKPQGPP--------PQGGNQPQGPPPP---PGKPQGPPPQGGNRPQGPPPPGKPQ 139
Query: 91 GLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAP--PPLPPRRGEGP 148
G PP+ + + + + G Q P G P PP PP + +GP
Sbjct: 140 GPPPQGDKSRSPRSPPGKPQG-----------------PPPQGGNQPQGPPPPPGKPQGP 182
Score = 38.5 bits (88), Expect = 0.005
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 19/114 (16%)
Query: 37 SRARGPPGRPSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPP 94
++ +GPP P GPP G P+ P PP G+ +GP +G + P R+ G P
Sbjct: 106 NQPQGPPPPPGKPQGPPPQGGNRPQGPPPP----GKPQGPPPQGDKSRSP--RSPPGKPQ 159
Query: 95 EPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGP 148
P P G +QP G P G P PP + +GP
Sbjct: 160 GPPPQ-------GGNQPQGPPPPPGKPQ----GPPPQGGKKPQGPPPPGKPQGP 202
Score = 36.6 bits (83), Expect = 0.020
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 37 SRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEP 96
++ +GPP P GPP G K PP G+ +GP +G +R++Q P +P
Sbjct: 167 NQPQGPPPPPGKPQGPPPQGGKKPQGPP--PPGKPQGPPPQG-----DKSRSSQSPPGKP 219
Query: 97 EPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGP 148
+ + P G+ G P G P PP + +GP
Sbjct: 220 QGPPPQGGNQPQGPPPPPGKPQGP--------PPQGGNKPQGPPPPGKPQGP 263
Score = 36.2 bits (82), Expect = 0.026
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 18/77 (23%)
Query: 33 RDPPSRARGPPGR-----------PSLRSGPPASGA--PKTPTPPNVRAGRGRGPRVRGW 79
+ PP + +GPP + P GPP G P+ P PP G+ +GP +G
Sbjct: 213 QSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP----GKPQGPPAQGG 268
Query: 80 RRSEPAARTAQGLPPEP 96
+S+ +AR+ G P P
Sbjct: 269 SKSQ-SARSPPGKPQGP 284
Score = 33.1 bits (74), Expect = 0.22
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 28/119 (23%)
Query: 34 DPPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSE--PAARTAQG 91
+ PS G P PS P P+ P PP G+ +GP +G + + P QG
Sbjct: 27 ESPSLIAGNPQGPS----PQGGNKPQGPPPP---PGKPQGPPPQGGNKPQGPPPPGKPQG 79
Query: 92 LPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGACAP--PPLPPRRGEGP 148
PP+ + + + + G Q P G P PP PP + +GP
Sbjct: 80 PPPQGDKSRSPRSPPGKPQG-----------------PPPQGGNQPQGPPPPPGKPQGP 121
Score = 33.1 bits (74), Expect = 0.22
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 33 RDPPSRARGPP---GRPSLRSGPPASGAPKTPTPPNVRAGRGRGP--RVRGWRRSEP 84
R PP + +GPP G PPA G P+ P P AG+ +GP +G R S P
Sbjct: 275 RSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP--PAGQPQGPPRPPQGGRPSRP 329
Score = 29.3 bits (64), Expect = 3.2
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 10/59 (16%)
Query: 39 ARGPPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQGLPPEPE 97
AR PPG+P GPP PP G + P+ P A QG P P+
Sbjct: 274 ARSPPGKP---QGPPQQEGNNPQGPPPPAGGNPQQPQA-------PPAGQPQGPPRPPQ 322
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 38.5 bits (88), Expect = 0.005
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 33 RDPPSRARG-PPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQG 91
RDPP R+ PP P R+G + P TP P+ R+G PR G R P R + G
Sbjct: 370 RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPS-RSGVD-SPR-SGPRPPLPPDRPSAG 426
Query: 92 LPPEPEPTHTRVAGLGSS--QPSWEGELW 118
PP P P+ + G S + WE +
Sbjct: 427 APPPPPPSTSIRNGFQDSPCEDEWESRFY 455
Score = 35.4 bits (80), Expect = 0.044
Identities = 38/119 (31%), Positives = 47/119 (39%), Gaps = 27/119 (22%)
Query: 31 GHRD---PPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRA---GRGRGPRVRGWRRSEP 84
GHR P R R PP RP + S P + P TP +++ RG P G R+ P
Sbjct: 156 GHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSP 215
Query: 85 AARTAQGLPPEPEPTHTRVA-GLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPP 142
G P P P + A G GS + S L +SS PPLPP
Sbjct: 216 ------GPTPPPFPGNRGTALGGGSIRQS--------------PLSSSSPFSNRPPLPP 254
Score = 32.0 bits (71), Expect = 0.49
Identities = 36/135 (26%), Positives = 45/135 (33%), Gaps = 22/135 (16%)
Query: 36 PSRARGPPGRPSLRSGPPASGAPKTP----TPPNVRAGRGRGPRVRGWRRSE-------- 83
PS R P R PP G P+ P TPP RG R+S
Sbjct: 188 PSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFS 247
Query: 84 --------PAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGAC 135
P+ PP P P R + + P + + S P++S
Sbjct: 248 NRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQN-NKPPVPSTPRPSASSQA 306
Query: 136 APPPLPPRR-GEGPL 149
PPP PP R G PL
Sbjct: 307 PPPPPPPSRPGPPPL 321
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 38.5 bits (88), Expect = 0.005
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 33 RDPPSRARG-PPGRPSLRSGPPASGAPKTPTPPNVRAGRGRGPRVRGWRRSEPAARTAQG 91
RDPP R+ PP P R+G + P TP P+ R+G PR G R P R + G
Sbjct: 370 RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPS-RSGVD-SPR-SGPRPPLPPDRPSAG 426
Query: 92 LPPEPEPTHTRVAGLGSS--QPSWEGELW 118
PP P P+ + G S + WE +
Sbjct: 427 APPPPPPSTSIRNGFQDSPCEDEWESRFY 455
Score = 35.4 bits (80), Expect = 0.044
Identities = 38/119 (31%), Positives = 47/119 (39%), Gaps = 27/119 (22%)
Query: 31 GHRD---PPSRARGPPGRPSLRSGPPASGAPKTPTPPNVRA---GRGRGPRVRGWRRSEP 84
GHR P R R PP RP + S P + P TP +++ RG P G R+ P
Sbjct: 156 GHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSP 215
Query: 85 AARTAQGLPPEPEPTHTRVA-GLGSSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPP 142
G P P P + A G GS + S L +SS PPLPP
Sbjct: 216 ------GPTPPPFPGNRGTALGGGSIRQS--------------PLSSSSPFSNRPPLPP 254
Score = 32.0 bits (71), Expect = 0.49
Identities = 36/135 (26%), Positives = 45/135 (33%), Gaps = 22/135 (16%)
Query: 36 PSRARGPPGRPSLRSGPPASGAPKTP----TPPNVRAGRGRGPRVRGWRRSE-------- 83
PS R P R PP G P+ P TPP RG R+S
Sbjct: 188 PSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFS 247
Query: 84 --------PAARTAQGLPPEPEPTHTRVAGLGSSQPSWEGELWGVRHLVSLSLPASSGAC 135
P+ PP P P R + + P + + S P++S
Sbjct: 248 NRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQN-NKPPVPSTPRPSASSQA 306
Query: 136 APPPLPPRR-GEGPL 149
PPP PP R G PL
Sbjct: 307 PPPPPPPSRPGPPPL 321
>gi|182765480 chromosome 6 open reading frame 186 [Homo sapiens]
Length = 366
Score = 38.1 bits (87), Expect = 0.007
Identities = 41/129 (31%), Positives = 50/129 (38%), Gaps = 10/129 (7%)
Query: 3 GLLSPVLLAEGLASGCRACWEL--ASFWATGHRDPPSRARGPPGRPSLRSGPPASGAPKT 60
G+L LL L G R C EL A + PP A PPG P L PPA G P+
Sbjct: 12 GVLRRCLLGAVLLFGLRLCAELRRAGPGSPTRSAPPGPAWRPPG-PHL---PPAPGQPRG 67
Query: 61 PTPPN---VRAGRGRGPRVRGWRRSEPAARTAQGLPPEPEPT-HTRVAGLGSSQPSWEGE 116
+ VR+GR P G EP +G P P H + S S + E
Sbjct: 68 ASRRQVTYVRSGRRAPPGGGGSGTPEPGCCAPRGRPRRKGPRWHIDLQPWAGSAQSLDEE 127
Query: 117 LWGVRHLVS 125
W +S
Sbjct: 128 AWRFLRYIS 136
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,348,550
Number of Sequences: 37866
Number of extensions: 886052
Number of successful extensions: 10612
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 891
Number of HSP's that attempted gapping in prelim test: 7132
Number of HSP's gapped (non-prelim): 3738
length of query: 240
length of database: 18,247,518
effective HSP length: 99
effective length of query: 141
effective length of database: 14,498,784
effective search space: 2044328544
effective search space used: 2044328544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.