Search of human proteins with 239756311

Search of human proteins with 239756311

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756311 PREDICTED: hypothetical protein [Homo sapiens]
         (151 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756311 PREDICTED: hypothetical protein [Homo sapiens]           306   3e-84
gi|228008295 synaptotagmin binding, cytoplasmic RNA interacting ...    36   0.014
gi|228008291 synaptotagmin binding, cytoplasmic RNA interacting ...    36   0.014
gi|41322923 plectin 1 isoform 11 [Homo sapiens]                        35   0.019
gi|41322914 plectin 1 isoform 10 [Homo sapiens]                        35   0.019
gi|41322919 plectin 1 isoform 8 [Homo sapiens]                         35   0.019
gi|41322910 plectin 1 isoform 7 [Homo sapiens]                         35   0.019
gi|41322916 plectin 1 isoform 6 [Homo sapiens]                         35   0.019
gi|41322908 plectin 1 isoform 3 [Homo sapiens]                         35   0.019
gi|41322912 plectin 1 isoform 2 [Homo sapiens]                         35   0.019
gi|47607492 plectin 1 isoform 1 [Homo sapiens]                         35   0.019
gi|228008293 synaptotagmin binding, cytoplasmic RNA interacting ...    34   0.041
gi|118766339 thyroid transcription factor 1 isoform 1 [Homo sapi...    34   0.041
gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens]     34   0.041
gi|239754370 PREDICTED: hypothetical protein [Homo sapiens]            34   0.054
gi|239748924 PREDICTED: hypothetical protein [Homo sapiens]            34   0.054
gi|239742946 PREDICTED: hypothetical protein [Homo sapiens]            34   0.054
gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]        33   0.070
gi|239746542 PREDICTED: hypothetical protein XP_002343773 [Homo ...    33   0.070
gi|38176300 nestin [Homo sapiens]                                      33   0.092
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ...    33   0.092
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]            33   0.092
gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo ...    33   0.092
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]            33   0.12 
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ...    33   0.12 
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ...    33   0.12 
gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H...    32   0.16 
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    32   0.16 
gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]                    32   0.16 
gi|169216749 PREDICTED: similar to Putative paraneoplastic antig...    32   0.20 

>gi|239756311 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 151

 Score =  306 bits (785), Expect = 3e-84
 Identities = 151/151 (100%), Positives = 151/151 (100%)

Query: 1   MRWWSEGGRAGFEARTVWGCAPSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLC 60
           MRWWSEGGRAGFEARTVWGCAPSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLC
Sbjct: 1   MRWWSEGGRAGFEARTVWGCAPSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLC 60

Query: 61  PQGQARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAA 120
           PQGQARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAA
Sbjct: 61  PQGQARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAA 120

Query: 121 AQQARQAVVGNVAAARERDGCQVGAPVRRVR 151
           AQQARQAVVGNVAAARERDGCQVGAPVRRVR
Sbjct: 121 AQQARQAVVGNVAAARERDGCQVGAPVRRVR 151


>gi|228008295 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 4 [Homo sapiens]
          Length = 588

 Score = 35.8 bits (81), Expect = 0.014
 Identities = 28/70 (40%), Positives = 33/70 (47%), Gaps = 9/70 (12%)

Query: 8   GRAGFEARTVWGCAPSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARA 67
           GR G  AR   G APS G  A         ++ RGG   ARG+ G  GGA      Q R 
Sbjct: 462 GRGGRGAR---GAAPSRGRGAAPPRGRAGYSQ-RGGPGSARGVRGARGGA-----QQQRG 512

Query: 68  RGAQAAQAGR 77
           RG + A+ GR
Sbjct: 513 RGVRGARGGR 522


>gi|228008291 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 1 [Homo sapiens]
          Length = 623

 Score = 35.8 bits (81), Expect = 0.014
 Identities = 28/70 (40%), Positives = 33/70 (47%), Gaps = 9/70 (12%)

Query: 8   GRAGFEARTVWGCAPSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARA 67
           GR G  AR   G APS G  A         ++ RGG   ARG+ G  GGA      Q R 
Sbjct: 497 GRGGRGAR---GAAPSRGRGAAPPRGRAGYSQ-RGGPGSARGVRGARGGA-----QQQRG 547

Query: 68  RGAQAAQAGR 77
           RG + A+ GR
Sbjct: 548 RGVRGARGGR 557


>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
          Length = 4547

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 64   QARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQ 123
            QA+AR A+AA+  R  +  E+ V  LQ        ++R  G A   LQA  A+A  A  Q
Sbjct: 1434 QAKARQAEAAERSRLRIEEEIRVVRLQL-----EATERQRGGAEGELQALRARAEEAEAQ 1488

Query: 124  ARQA 127
             RQA
Sbjct: 1489 KRQA 1492


>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
          Length = 4551

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 64   QARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQ 123
            QA+AR A+AA+  R  +  E+ V  LQ        ++R  G A   LQA  A+A  A  Q
Sbjct: 1438 QAKARQAEAAERSRLRIEEEIRVVRLQL-----EATERQRGGAEGELQALRARAEEAEAQ 1492

Query: 124  ARQA 127
             RQA
Sbjct: 1493 KRQA 1496


>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
          Length = 4547

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 64   QARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQ 123
            QA+AR A+AA+  R  +  E+ V  LQ        ++R  G A   LQA  A+A  A  Q
Sbjct: 1434 QAKARQAEAAERSRLRIEEEIRVVRLQL-----EATERQRGGAEGELQALRARAEEAEAQ 1488

Query: 124  ARQA 127
             RQA
Sbjct: 1489 KRQA 1492


>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
          Length = 4515

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 64   QARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQ 123
            QA+AR A+AA+  R  +  E+ V  LQ        ++R  G A   LQA  A+A  A  Q
Sbjct: 1402 QAKARQAEAAERSRLRIEEEIRVVRLQL-----EATERQRGGAEGELQALRARAEEAEAQ 1456

Query: 124  ARQA 127
             RQA
Sbjct: 1457 KRQA 1460


>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
          Length = 4684

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 64   QARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQ 123
            QA+AR A+AA+  R  +  E+ V  LQ        ++R  G A   LQA  A+A  A  Q
Sbjct: 1571 QAKARQAEAAERSRLRIEEEIRVVRLQL-----EATERQRGGAEGELQALRARAEEAEAQ 1625

Query: 124  ARQA 127
             RQA
Sbjct: 1626 KRQA 1629


>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
          Length = 4525

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 64   QARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQ 123
            QA+AR A+AA+  R  +  E+ V  LQ        ++R  G A   LQA  A+A  A  Q
Sbjct: 1412 QAKARQAEAAERSRLRIEEEIRVVRLQL-----EATERQRGGAEGELQALRARAEEAEAQ 1466

Query: 124  ARQA 127
             RQA
Sbjct: 1467 KRQA 1470


>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
          Length = 4533

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 64   QARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQ 123
            QA+AR A+AA+  R  +  E+ V  LQ        ++R  G A   LQA  A+A  A  Q
Sbjct: 1420 QAKARQAEAAERSRLRIEEEIRVVRLQL-----EATERQRGGAEGELQALRARAEEAEAQ 1474

Query: 124  ARQA 127
             RQA
Sbjct: 1475 KRQA 1478


>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
          Length = 4574

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 64   QARARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQ 123
            QA+AR A+AA+  R  +  E+ V  LQ        ++R  G A   LQA  A+A  A  Q
Sbjct: 1461 QAKARQAEAAERSRLRIEEEIRVVRLQL-----EATERQRGGAEGELQALRARAEEAEAQ 1515

Query: 124  ARQA 127
             RQA
Sbjct: 1516 KRQA 1519


>gi|228008293 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 5 [Homo sapiens]
          Length = 561

 Score = 34.3 bits (77), Expect = 0.041
 Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 9/69 (13%)

Query: 8   GRAGFEARTVWGCAPSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARA 67
           GR G  AR   G APS G  A         ++ RGG   ARG+ G  GGA      Q R 
Sbjct: 497 GRGGRGAR---GAAPSRGRGAAPPRGRAGYSQ-RGGPGSARGVRGARGGA-----QQQRG 547

Query: 68  RGAQAAQAG 76
           RG +  +AG
Sbjct: 548 RGGKGVEAG 556


>gi|118766339 thyroid transcription factor 1 isoform 1 [Homo
           sapiens]
          Length = 401

 Score = 34.3 bits (77), Expect = 0.041
 Identities = 34/95 (35%), Positives = 39/95 (41%), Gaps = 18/95 (18%)

Query: 31  RLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARARGAQAAQAGRAHVAAEVHVQ--- 87
           + A QQL +  GG        G  GG   CPQ Q      QA Q     VA  V V+   
Sbjct: 253 KAAQQQLQQDSGG--------GGGGGGTGCPQQQ------QAQQQSPRRVAVPVLVKDGK 298

Query: 88  -CLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAA 121
            C   AP     S +     +A  QAQ AQA AAA
Sbjct: 299 PCQAGAPAPGAASLQGHAQQQAQHQAQAAQAAAAA 333


>gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens]
          Length = 371

 Score = 34.3 bits (77), Expect = 0.041
 Identities = 34/95 (35%), Positives = 39/95 (41%), Gaps = 18/95 (18%)

Query: 31  RLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARARGAQAAQAGRAHVAAEVHVQ--- 87
           + A QQL +  GG        G  GG   CPQ Q      QA Q     VA  V V+   
Sbjct: 223 KAAQQQLQQDSGG--------GGGGGGTGCPQQQ------QAQQQSPRRVAVPVLVKDGK 268

Query: 88  -CLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAA 121
            C   AP     S +     +A  QAQ AQA AAA
Sbjct: 269 PCQAGAPAPGAASLQGHAQQQAQHQAQAAQAAAAA 303


>gi|239754370 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 435

 Score = 33.9 bits (76), Expect = 0.054
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 60  CPQGQARARGAQAA--QAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQ 113
           CP   +R++ A AA  Q  R   AA V  QC  RAP ++H + R  G   A+ Q +
Sbjct: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGR 236


>gi|239748924 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 435

 Score = 33.9 bits (76), Expect = 0.054
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 60  CPQGQARARGAQAA--QAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQ 113
           CP   +R++ A AA  Q  R   AA V  QC  RAP ++H + R  G   A+ Q +
Sbjct: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGR 236


>gi|239742946 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 435

 Score = 33.9 bits (76), Expect = 0.054
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 60  CPQGQARARGAQAA--QAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQ 113
           CP   +R++ A AA  Q  R   AA V  QC  RAP ++H + R  G   A+ Q +
Sbjct: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGR 236


>gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
          Length = 753

 Score = 33.5 bits (75), Expect = 0.070
 Identities = 31/89 (34%), Positives = 34/89 (38%), Gaps = 15/89 (16%)

Query: 11  GFEARTVWGCAPS------------PGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAV 58
           G +A   WGC PS            P AA G       +      RAR R L    G A 
Sbjct: 208 GGDAVAKWGCGPSGGTRRRSTTQPHPWAAEGPARGTPSVGSLWKRRARGRQLNRPWGRAR 267

Query: 59  LCPQGQARARGAQAAQA---GRAHVAAEV 84
           L  QG   +RG  AA A   GRA  A  V
Sbjct: 268 LALQGAPPSRGTSAATAACTGRARAARAV 296


>gi|239746542 PREDICTED: hypothetical protein XP_002343773 [Homo
           sapiens]
          Length = 302

 Score = 33.5 bits (75), Expect = 0.070
 Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 2/97 (2%)

Query: 21  APSPGAAAGRRLALQQLAEGRGGRARARGLVGQHG-GAVLCPQGQARARGAQAAQAGRAH 79
           AP+P  AA   L +     GR GR R R   G HG  A L  + +A    A+A +  +  
Sbjct: 31  APAPSLAAPSLLEVDVAQAGRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRR 90

Query: 80  VAAEVHVQCLQRAPVRRHG-SQRAVGDARAVLQAQCA 115
           V A + +   +R  VR     Q  V   R + QAQ A
Sbjct: 91  VEARLELAVSRRLHVRAEDVLQLRVLHLRHLHQAQVA 127


>gi|38176300 nestin [Homo sapiens]
          Length = 1621

 Score = 33.1 bits (74), Expect = 0.092
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 66  RARGAQAAQAGRAHVAAE---VHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQ 122
           R R   AA+  R ++A E   V  +C Q    R   ++    + RAV   +CA+AW ++Q
Sbjct: 70  RWREKHAAEVARDNLAEELEGVAGRCQQLRLARERTTEEVARNRRAVEAEKCARAWLSSQ 129

Query: 123 QA---RQAVVGNVAAARERDGCQVGA 145
            A   R+     VA   ER G    A
Sbjct: 130 VAELERELEALRVAHEEERVGLNAQA 155


>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
           sapiens]
          Length = 600

 Score = 33.1 bits (74), Expect = 0.092
 Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 12/117 (10%)

Query: 25  GAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARARGAQAAQAG---RAHVA 81
           G A G +  L ++ EG+GGR R         G  L   G+   RG QA   G   R    
Sbjct: 362 GQALGGQDVLLEV-EGQGGRGRP--------GQSLRRSGRGHGRGIQARDTGGGPRNRGQ 412

Query: 82  AEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQARQAVVGNVAAARER 138
              H           HG    V + R  ++   A+      +ARQ  +G V   R R
Sbjct: 413 EGTHASGRHAGEGAPHGKLAGVQEERVPVEELLARQARGEAEARQGALGQVRGGRVR 469



 Score = 26.9 bits (58), Expect = 6.6
 Identities = 30/111 (27%), Positives = 36/111 (32%), Gaps = 8/111 (7%)

Query: 6   EGGRAGFEARTVWGCAPSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQA 65
           E G A  E R    C        G   A+Q      G R R  G  GQ GG         
Sbjct: 256 ERGGAAVEFRARVHCHRGRAGGQGGDFAVQ------GPRGRRHG--GQGGGEQTAAVRDR 307

Query: 66  RARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQ 116
              G  A    RAH         + RA   R G  R  G  R  ++ Q ++
Sbjct: 308 HRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRRCGHVRVGVREQASE 358


>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 510

 Score = 33.1 bits (74), Expect = 0.092
 Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 12/117 (10%)

Query: 25  GAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARARGAQAAQAG---RAHVA 81
           G A G +  L ++ EG+GGR R         G  L   G+   RG QA   G   R    
Sbjct: 219 GQALGGQDVLLEV-EGQGGRGRP--------GQSLRRSGRGHGRGIQARDTGGGPRNRGQ 269

Query: 82  AEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQARQAVVGNVAAARER 138
              H           HG    V + R  ++   A+      +ARQ  +G V   R R
Sbjct: 270 EGTHASGRHAGEGAPHGKLAGVQEERVPVEELLARQARGEAEARQGALGQVRGGRVR 326



 Score = 26.9 bits (58), Expect = 6.6
 Identities = 30/111 (27%), Positives = 36/111 (32%), Gaps = 8/111 (7%)

Query: 6   EGGRAGFEARTVWGCAPSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQA 65
           E G A  E R    C        G   A+Q      G R R  G  GQ GG         
Sbjct: 113 ERGGAAVEFRARVHCHRGRAGGQGGDFAVQ------GPRGRRHG--GQGGGEQTAAVRDR 164

Query: 66  RARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQ 116
              G  A    RAH         + RA   R G  R  G  R  ++ Q ++
Sbjct: 165 HRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRRCGHVRVGVREQASE 215


>gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo
           sapiens]
          Length = 457

 Score = 33.1 bits (74), Expect = 0.092
 Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 12/117 (10%)

Query: 25  GAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARARGAQAAQAG---RAHVA 81
           G A G +  L ++ EG+GGR R         G  L   G+   RG QA   G   R    
Sbjct: 219 GQALGGQDVLLEV-EGQGGRGRP--------GQSLRRSGRGHGRGIQARDTGGGPRNRGQ 269

Query: 82  AEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQARQAVVGNVAAARER 138
              H           HG    V + R  ++   A+      +ARQ  +G V   R R
Sbjct: 270 EGTHASGRHAGEGAPHGKLAGVQEERVPVEELLARQARGEAEARQGALGQVRGGRVR 326



 Score = 26.9 bits (58), Expect = 6.6
 Identities = 30/111 (27%), Positives = 36/111 (32%), Gaps = 8/111 (7%)

Query: 6   EGGRAGFEARTVWGCAPSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQA 65
           E G A  E R    C        G   A+Q      G R R  G  GQ GG         
Sbjct: 113 ERGGAAVEFRARVHCHRGRAGGQGGDFAVQ------GPRGRRHG--GQGGGEQTAAVRDR 164

Query: 66  RARGAQAAQAGRAHVAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQ 116
              G  A    RAH         + RA   R G  R  G  R  ++ Q ++
Sbjct: 165 HRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRRCGHVRVGVREQASE 215


>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 15/73 (20%)

Query: 22  PSPGAAA----GRRLALQQLAEGRG-------GRARARGLVGQHGGAVLCPQGQARARGA 70
           P PG AA    GR       A GRG       G  RA   VG  G + + P G   ARGA
Sbjct: 138 PHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGA 197

Query: 71  QAAQ----AGRAH 79
           +AA+     GR H
Sbjct: 198 RAAEHPAVGGRGH 210


>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
           sapiens]
          Length = 446

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 15/73 (20%)

Query: 22  PSPGAAA----GRRLALQQLAEGRG-------GRARARGLVGQHGGAVLCPQGQARARGA 70
           P PG AA    GR       A GRG       G  RA   VG  G + + P G   ARGA
Sbjct: 287 PHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGA 346

Query: 71  QAAQ----AGRAH 79
           +AA+     GR H
Sbjct: 347 RAAEHPAVGGRGH 359


>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
           sapiens]
          Length = 446

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 15/73 (20%)

Query: 22  PSPGAAA----GRRLALQQLAEGRG-------GRARARGLVGQHGGAVLCPQGQARARGA 70
           P PG AA    GR       A GRG       G  RA   VG  G + + P G   ARGA
Sbjct: 287 PHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGA 346

Query: 71  QAAQ----AGRAH 79
           +AA+     GR H
Sbjct: 347 RAAEHPAVGGRGH 359


>gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo
           sapiens]
          Length = 340

 Score = 32.3 bits (72), Expect = 0.16
 Identities = 44/156 (28%), Positives = 60/156 (38%), Gaps = 43/156 (27%)

Query: 22  PSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARARG-----AQAAQAG 76
           PS   AAG     ++   G GG A A G +G+ G      +G+A A G     ++A  AG
Sbjct: 106 PSEAGAAG-----EEEEAGDGGAAGAAGAIGETGAV---GKGEAEATGEGGSASEAEGAG 157

Query: 77  RAHVAAEVHVQCLQR-------APVRRHGSQRAVGDARAVLQAQCAQAWAAAQQAR---- 125
                 E+ V    R             G   AVG+A AV +A  A    A  +AR    
Sbjct: 158 EGGAGDELRVAEEARESDEGAAGDTGPAGEAEAVGEAGAVGEAGAAGEAGAVGEARGTNV 217

Query: 126 ------------QAVVGNVA-------AARERDGCQ 142
                       QAV+ N A       + RE+ GC+
Sbjct: 218 TRAWVQPRRCTLQAVLENRAYQELRPFSGREQPGCE 253


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 32.3 bits (72), Expect = 0.16
 Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 18  WGCAPSPGAAAGR-RLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARARGAQAAQAG 76
           W C   PG   G  R   Q    GRGGR R RG     GG     +  +RA+  +  Q  
Sbjct: 266 WKCKEGPGPGPGTPRRGGQSSRGGRGGRGRGRG-----GGLPFVIKFVSRAKKVKMGQLS 320

Query: 77  RAHVAAE---VHVQCLQRAPVRRHGS 99
               + +    H +  Q  P RR GS
Sbjct: 321 LGLESGQGQGQHEESWQDVPQRRVGS 346


>gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]
          Length = 236

 Score = 32.3 bits (72), Expect = 0.16
 Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 10/111 (9%)

Query: 22  PSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARARGAQAAQAGRAHVA 81
           P  GAA G R  + Q   GRG R  A     + G   +     AR     AA+ GR   A
Sbjct: 11  PQTGAANGDR-DVPQAEVGRGRREPAPAQPEEAGEGAMAA---ARGGPVPAAREGRMAAA 66

Query: 82  AEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQAWAAAQQARQAVVGNV 132
                   + APV       A   ARA    + + A AAA++AR A V  +
Sbjct: 67  RAAPAAAARGAPVA------AAALARAAAAGRESPAAAAAREARMAEVARL 111


>gi|169216749 PREDICTED: similar to Putative paraneoplastic
           antigen-like protein 6B-like protein [Homo sapiens]
          Length = 340

 Score = 32.0 bits (71), Expect = 0.20
 Identities = 44/156 (28%), Positives = 60/156 (38%), Gaps = 43/156 (27%)

Query: 22  PSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARARG-----AQAAQAG 76
           PS   AAG     ++   G GG A A G +G+ G      +G+A A G     ++A  AG
Sbjct: 106 PSEAGAAG-----EEEEAGDGGAAGAAGAIGETGAV---GKGEAEATGEGGSASEAEGAG 157

Query: 77  RAHVAAEVHVQCLQR-------APVRRHGSQRAVGDARAVLQAQCAQAWAAAQQAR---- 125
                 E+ V    R             G   AVG+A AV +A  A    A  +AR    
Sbjct: 158 EGGAGDELRVAEEARESDEGAAGDTGPAGEAEAVGEAGAVGEAGAAGEAGAVGEARGTNV 217

Query: 126 ------------QAVVGNVA-------AARERDGCQ 142
                       QAV+ N A       + RE+ GC+
Sbjct: 218 TRAWVQPRRCTLQAVLENRAYQELRPFSGREQPGCK 253


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.130    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,869,324
Number of Sequences: 37866
Number of extensions: 246270
Number of successful extensions: 1235
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 1154
Number of HSP's gapped (non-prelim): 223
length of query: 151
length of database: 18,247,518
effective HSP length: 93
effective length of query: 58
effective length of database: 14,725,980
effective search space: 854106840
effective search space used: 854106840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.