Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239755891
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755891 PREDICTED: hypothetical protein [Homo sapiens]
(246 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755891 PREDICTED: hypothetical protein [Homo sapiens] 505 e-143
gi|91208420 bassoon protein [Homo sapiens] 44 1e-04
gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 43 3e-04
gi|92859678 small nuclear RNA activating complex, polypeptide 4,... 42 4e-04
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens] 42 6e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 40 0.002
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 38 0.007
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 38 0.007
gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo ... 38 0.009
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] 38 0.009
gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo ... 38 0.009
gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo ... 38 0.009
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 37 0.012
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 37 0.012
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 37 0.012
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 37 0.012
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 37 0.012
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 37 0.012
gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo ... 37 0.012
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 37 0.012
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 37 0.012
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 37 0.012
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 37 0.016
gi|188536004 zinc finger protein 469 [Homo sapiens] 37 0.016
gi|31542984 inter-alpha (globulin) inhibitor H4 [Homo sapiens] 37 0.016
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 37 0.021
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 37 0.021
gi|217416343 fibrosin-like 1 [Homo sapiens] 37 0.021
>gi|239755891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 246
Score = 505 bits (1301), Expect = e-143
Identities = 246/246 (100%), Positives = 246/246 (100%)
Query: 1 MVAEREGMGLFLPRSWRTDDKVPRSRGHPLIAYKEKAGALRGPEAPTRGAEVRELPHLRP 60
MVAEREGMGLFLPRSWRTDDKVPRSRGHPLIAYKEKAGALRGPEAPTRGAEVRELPHLRP
Sbjct: 1 MVAEREGMGLFLPRSWRTDDKVPRSRGHPLIAYKEKAGALRGPEAPTRGAEVRELPHLRP 60
Query: 61 GGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGGTRRRGRCRGIGPSAQPSRGSETPRRGW 120
GGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGGTRRRGRCRGIGPSAQPSRGSETPRRGW
Sbjct: 61 GGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGGTRRRGRCRGIGPSAQPSRGSETPRRGW 120
Query: 121 RKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAA 180
RKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAA
Sbjct: 121 RKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAA 180
Query: 181 FQELSRNRPHVTAGPATALKRLGRNTQASGKTGVCHLRTTTTTTHSTLKTPCDPGMHSTK 240
FQELSRNRPHVTAGPATALKRLGRNTQASGKTGVCHLRTTTTTTHSTLKTPCDPGMHSTK
Sbjct: 181 FQELSRNRPHVTAGPATALKRLGRNTQASGKTGVCHLRTTTTTTHSTLKTPCDPGMHSTK 240
Query: 241 SVWPRI 246
SVWPRI
Sbjct: 241 SVWPRI 246
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 43.9 bits (102), Expect = 1e-04
Identities = 46/196 (23%), Positives = 63/196 (32%), Gaps = 29/196 (14%)
Query: 43 PEAPTRGAEVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGGTRRRGRCRG 102
P G++ +LP G A AG + L DG GGT + R
Sbjct: 1423 PTTANYGSQTEDLPQAPSG-----------LAAAGRAAREKPLSASDGEGGTPQPSRAYS 1471
Query: 103 IGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLA 162
S+ P +P +G A F PS AP PR
Sbjct: 1472 YFASSSPPLSPSSPSESPTFSPGKMGPRATAEFSTQ----------TPSPAPASDMPRSP 1521
Query: 163 ALPVSAPLAP-------RPAAAEAAFQELSRNRPHVTAGPATALKRLGRNTQASGKTG-V 214
P +P+ RP+ +QE S+ P + A+ R AS T +
Sbjct: 1522 GAPTPSPMVAQGTQTPHRPSTPRLVWQESSQEAPFMVITLASDASSQTRMVHASASTSPL 1581
Query: 215 CHLRTTTTTTHSTLKT 230
C T TTH +T
Sbjct: 1582 CSPTETQPTTHGYSQT 1597
Score = 28.9 bits (63), Expect = 4.3
Identities = 26/106 (24%), Positives = 36/106 (33%), Gaps = 14/106 (13%)
Query: 99 RCRGIGPSAQPS-RGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRT 157
R G P Q +G P +A+ L A P + P+ LR PS P
Sbjct: 546 RASGTSPLKQKGPQGLGQPSGPLPAKASPLSTKASPLPSKASPQAKPLRASEPSKTPSSV 605
Query: 158 RPRLAALPVSAPLAPRPAAAEAAFQELSRNRPHVTAGPATALKRLG 203
+ + +P A P+P P T PAT + G
Sbjct: 606 QEKKTRVPTKAEPMPKPP-------------PETTPTPATPKVKSG 638
>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
Length = 1015
Score = 42.7 bits (99), Expect = 3e-04
Identities = 59/234 (25%), Positives = 87/234 (37%), Gaps = 28/234 (11%)
Query: 4 EREGMGLFLPRSWRTDDKVPRSRGHPLIAYKEKAGALRGPEAPTRGAEVRELPHLRPGGS 63
+R G G PR + + P+ + L + + + GP GA+ RE
Sbjct: 80 QRHGPGSGFPRGPGSGPRPPQPQLRTLPSGEMEVIFGVGPLFGCSGADDREAQQ------ 133
Query: 64 SLPSPRFLVPALAG----LGVPRRS-LPDQDGCGGTRRRGRCRGIGPSAQPSRGSETPRR 118
P F+ P G VPR+S +PD T R RG P+A
Sbjct: 134 QFTEPAFISPLPPGPASPAAVPRQSQVPDGGSRWATYLELRPRGPSPAAPAQ-------- 185
Query: 119 GWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPR---RTRPRLAALPVSAPLAPRPA 175
+ L GA P ++P+R +PRP + PR RPRL S + P
Sbjct: 186 -FECVEVALEEGAAPARPRTVPKRQIELRPRPQSPPRAAGAPRPRLLLRTGSLDESLGPL 244
Query: 176 AAEAAFQELSRNRPHVTAGPATALKRLGRNTQASGKTGVCHLRTTTTTTHSTLK 229
A A F + + R PA + G ++ +T R T +TH L+
Sbjct: 245 QAAAGFVQTALARKLSPEAPAPSSATFGSTGRSEPET-----RETARSTHVVLE 293
Score = 34.7 bits (78), Expect = 0.078
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 82 RRSLPDQDG----CGGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGL 137
+R +PD DG GG R + +GP+ G +PR G + A+ G P+
Sbjct: 766 QRLVPDGDGRTSPLGGARSSSQRSPVGPA-----GVRSPRPGSPQMQASPSPGIAPK--- 817
Query: 138 SLPRRSELRKPRPSAAPRRTRPR--LAALPVSAPLAPRPAAA 177
++ P P+AA + PR LA +AP PR A+A
Sbjct: 818 ---PKTPPTAPEPAAAVQAPLPREPLALAGRTAPAQPRAASA 856
Score = 31.2 bits (69), Expect = 0.86
Identities = 43/172 (25%), Positives = 59/172 (34%), Gaps = 19/172 (11%)
Query: 31 IAYKEKAGALRGPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDG 90
+A +E A R P R E+R P P + P PR L+ G SL
Sbjct: 191 VALEEGAAPARPRTVPKRQIELRPRPQSPPRAAGAPRPRLLLRT----GSLDESLGPLQA 246
Query: 91 CGGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELR---K 147
G + R + P A P+ S T R + T L + LR
Sbjct: 247 AAGFVQTALARKLSPEA-PAPSSATFGSTGRSEPETRETARSTHVVLEKAKSRPLRVRDN 305
Query: 148 PRPSAAPR-------RTRPRLAALPVSAPLAPRPAA----AEAAFQELSRNR 188
P+ APR R R P + PL P ++ +E QE + R
Sbjct: 306 SAPAKAPRPWPSLRERAIRRDKPAPGTEPLGPVSSSIFLQSEEKIQEARKTR 357
>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
190kDa [Homo sapiens]
Length = 1469
Score = 42.4 bits (98), Expect = 4e-04
Identities = 55/184 (29%), Positives = 73/184 (39%), Gaps = 29/184 (15%)
Query: 61 GGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGGTRRRGRCRGIGPSAQ--PSRGSETPRR 118
G +L SP+++VP + L VP R Q GG G G GP+A P +GS +
Sbjct: 555 GDRALLSPQYMVPDM-DLWVPARQSTSQPWRGGA---GAWLG-GPAASLSPPKGSSASQG 609
Query: 119 GWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAAAE 178
G ++ + T E + +P R+ PR + A S RPA AE
Sbjct: 610 GSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQA-------------SHSADTRPAGAE 656
Query: 179 AAFQELSRNRPHVTAGPATALKRLGRNTQASGKTGVCHLRTTTTTTHSTLKTPCDPGMHS 238
Q L R +T T L+ L NT A T LR T S PG+ S
Sbjct: 657 K--QALEGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSS-------PGVSS 707
Query: 239 TKSV 242
SV
Sbjct: 708 GDSV 711
Score = 28.1 bits (61), Expect = 7.3
Identities = 34/133 (25%), Positives = 49/133 (36%), Gaps = 21/133 (15%)
Query: 55 LPHLRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDGC---GGTRRRGR------CRGIGP 105
LPH P G P P L L+G G P + P G GT + + + P
Sbjct: 933 LPHT-PHGRPAPGPTVLNVPLSGPGAPAAAKPGTSGSWQEAGTSAKDKRLSTMQALPLAP 991
Query: 106 SAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPR----L 161
+ G+ QA LG G + +S P + P+A+ ++ P L
Sbjct: 992 VFSEAEGTAPA----ASQAPALGPG---QISVSCPESGLGQSQAPAASRKQGLPEAPPFL 1044
Query: 162 AALPVSAPLAPRP 174
A P PL +P
Sbjct: 1045 PAAPSPTPLPVQP 1057
>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
Length = 980
Score = 41.6 bits (96), Expect = 6e-04
Identities = 40/125 (32%), Positives = 44/125 (35%), Gaps = 4/125 (3%)
Query: 43 PEAPTRGAEVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSL---PDQDGCGGTRRRGR 99
P P AE+ + LRP G S P LV AL G P Q R
Sbjct: 25 PGGPWPAAELGLVLALRPAGESPAGPALLVAALEGPDAGTEEQGPGPPQLLVSRALLRLL 84
Query: 100 CRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRP 159
G G + P GW +LG G PR G L RR E P P TRP
Sbjct: 85 ALGSGAWVRARAVRRPPALGWALLGTSLGPGLGPRVGPLLVRRGE-TLPVPGPRVLETRP 143
Query: 160 RLAAL 164
L L
Sbjct: 144 ALQGL 148
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 39.7 bits (91), Expect = 0.002
Identities = 47/172 (27%), Positives = 64/172 (37%), Gaps = 39/172 (22%)
Query: 45 APTRGAEVRELPHLRPGGSSLPSPRFLVPALAGLGVPRR-------------------SL 85
+P E R+ R GS PSP +G G P+R S
Sbjct: 279 SPKHRDEGRKTGSQRSSGSRSPSPS----GGSGWGSPQRNGGSGQRSGAHGGRPGSAHSP 334
Query: 86 PDQDGCGGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSEL 145
PD+ R R + P+ P+RG E+P R ++ GRG G RR
Sbjct: 335 PDKPSSPSPRVRDKAAAAAPTP-PARGKESPSP--RSAPSSQGRGGRAAGGAGRRRRRRR 391
Query: 146 RKPRP---SAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQELSRNRPHVTAG 194
R+ R ++APRR R PRPA + + LSR R +G
Sbjct: 392 RRRRSRSSASAPRRRGRR----------RPRPAPPRGSSRSLSRARSSSDSG 433
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 38.5 bits (88), Expect = 0.005
Identities = 49/159 (30%), Positives = 59/159 (37%), Gaps = 26/159 (16%)
Query: 60 PGGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGGTRRRGRCRGIGP--SAQPSRGSETPR 117
PGG LP P +V L G+ R P R R + +AQP R S P+
Sbjct: 30 PGGFCLPGPALVVAGLDGI----RPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQ 85
Query: 118 RGWRKQAAT-LGRGAEPRFGLS---------LPRRSELRKPRPSAAPRRTRPRLAALPVS 167
G A+ L +PR + LP R PRPS RP LP S
Sbjct: 86 GGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRP---VLPPS 142
Query: 168 APLAPRPAAAE-------AAFQELSRNRPHVTAGPATAL 199
A APRP A A ++ R R AG AL
Sbjct: 143 ALAAPRPPLARPLPQGSVTAREQEQRPRSRRRAGAPEAL 181
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 38.5 bits (88), Expect = 0.005
Identities = 49/159 (30%), Positives = 59/159 (37%), Gaps = 26/159 (16%)
Query: 60 PGGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGGTRRRGRCRGIGP--SAQPSRGSETPR 117
PGG LP P +V L G+ R P R R + +AQP R S P+
Sbjct: 30 PGGFCLPGPALVVAGLDGI----RPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQ 85
Query: 118 RGWRKQAAT-LGRGAEPRFGLS---------LPRRSELRKPRPSAAPRRTRPRLAALPVS 167
G A+ L +PR + LP R PRPS RP LP S
Sbjct: 86 GGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRP---VLPPS 142
Query: 168 APLAPRPAAAE-------AAFQELSRNRPHVTAGPATAL 199
A APRP A A ++ R R AG AL
Sbjct: 143 ALAAPRPPLARPLPQGSVTAREQEQRPRSRRRAGAPEAL 181
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 38.1 bits (87), Expect = 0.007
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 60 PGGSSLPSPRFLVPALAGLG-VPRRSLPDQDGCGGTRRRGRCRGIGPSAQPSRGSETPRR 118
P G + P+ + AG P+RS+P + G GT G P RG P
Sbjct: 240 PLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPM-----GASGPGYPLRGGRAPSP 294
Query: 119 GWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPA 175
G+ +Q+ G +P + + S +P+PS + P A P P P PA
Sbjct: 295 GYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPA 351
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 38.1 bits (87), Expect = 0.007
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 133 PRFGLSLPRRSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQEL-----SRN 187
P+ LP+ S PS P + + S+P +P+PA A + +E+ S+N
Sbjct: 406 PKSPEKLPQSSSSESSPPSPQPTKVSRHAS----SSPESPKPAPAPGSHREISSSPTSKN 461
Query: 188 RPHVTA-----GPATALKRLGRN-TQASGKTGVCHLRTTTTTTHSTLKTP 231
R H A T +R+GR+ + A+ K G RT T HS ++P
Sbjct: 462 RSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSP 511
Score = 32.7 bits (73), Expect = 0.30
Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 25/180 (13%)
Query: 13 PRSWRTDDKVPRSRGHPLIAYKEKAGALRGPEAPTRGAEVRELPHLRPGGSSLPSPRFLV 72
P R+ + P RG + A +P R P R G S +P
Sbjct: 599 PTRRRSRSRTPARRGRS--RSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTP---- 652
Query: 73 PALAGLGVPRRSLPDQDGCGGTR----RRGRCRGIGPSAQPSRGSETPRRGWRKQAATLG 128
A G R P + G +R R GR R P+ + S TPRRG + + +
Sbjct: 653 ---ARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVR 709
Query: 129 RG--------AEPRFGLSLPR----RSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAA 176
RG R G S R R+ R+ R +++P + R+++ + +PR A
Sbjct: 710 RGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKA 769
Score = 31.6 bits (70), Expect = 0.66
Identities = 39/143 (27%), Positives = 55/143 (38%), Gaps = 20/143 (13%)
Query: 94 TRRRGRCRGIGPSAQPSRGSETP---RRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRP 150
TRRR R R + + SR +P RR + + R + R ++ RRS R P
Sbjct: 1978 TRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLL 2037
Query: 151 SAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQELSRNRPHVTAGPATALKRLGRNTQASG 210
R+R LA S PR A + + L+R+ P + R ASG
Sbjct: 2038 PRKRSRSRSPLAIRRRSRSRTPRTARGK---RSLTRSPPAI------------RRRSASG 2082
Query: 211 KTGVCHLRTT--TTTTHSTLKTP 231
+ T T HS +TP
Sbjct: 2083 SSSDRSRSATPPATRNHSGSRTP 2105
Score = 31.2 bits (69), Expect = 0.86
Identities = 54/199 (27%), Positives = 72/199 (36%), Gaps = 18/199 (9%)
Query: 36 KAGALRGPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPALAGLG-VPRRSLPDQDGCGGT 94
K G R RG P R S+ R P G P+R P T
Sbjct: 491 KRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQR--PGWSRSRNT 548
Query: 95 RRRGRCRGIGPSAQPSRG-SETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAA 153
+RRGR R SA+ R S +P R ++ T R R RRS R P +
Sbjct: 549 QRRGRSR----SARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRS 604
Query: 154 PRRTRPRLAALPVSAPLAPRPAAAEAAFQELSRNRPHVTAGPATALKRLGRN-TQASGKT 212
RT R P A R + + + SR+R PA +R GR+ ++ +
Sbjct: 605 RSRTPARRGRSRSRTP-ARRRSRTRSPVRRRSRSR-----SPA---RRSGRSRSRTPARR 655
Query: 213 GVCHLRTTTTTTHSTLKTP 231
G RT S +TP
Sbjct: 656 GRSRSRTPARRGRSRSRTP 674
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/147 (24%), Positives = 53/147 (36%), Gaps = 6/147 (4%)
Query: 90 GCGGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPR 149
G + RRGR P+ + S TP R R ++ T R R RRS R P
Sbjct: 552 GRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPAR-RRSRSRTPTRRRSRSRTPA 610
Query: 150 PSAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQE-LSRNRPHVTAGPA----TALKRLGR 204
R P +P+ R + A + SR+R G + A + R
Sbjct: 611 RRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSR 670
Query: 205 NTQASGKTGVCHLRTTTTTTHSTLKTP 231
+ + ++G RT S +TP
Sbjct: 671 SRTPARRSGRSRSRTPARRGRSRSRTP 697
Score = 29.6 bits (65), Expect = 2.5
Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 12/115 (10%)
Query: 94 TRRRGRCRGIGPSAQPSRGSETP--RRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPS 151
TRRR R R S + SR P RR R + T R + R RRS R P
Sbjct: 1907 TRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSR--TPP 1964
Query: 152 AAPRRTRPRLAALPVSAPLAPRPAAAEAAFQELSRNRPHVTAGPATALKRLGRNT 206
RR+R R ++P+ R + + + ++R R P T + R +
Sbjct: 1965 VTRRRSRSR------TSPITRRRSRSRTS--PVTRRRSRSRTSPVTRRRSRSRTS 2011
Score = 28.1 bits (61), Expect = 7.3
Identities = 36/123 (29%), Positives = 50/123 (40%), Gaps = 11/123 (8%)
Query: 45 APTRGAEVRELPHLRPGGSSLPSPRFLVPALAGLGV--PRRSLPDQDGCGGTRRR---GR 99
AP A R L P +SL S R + PAL+G + PR L + G R
Sbjct: 2348 APVNIAGSRTAAALAP--ASLTSAR-MAPALSGANLTSPRVPLSAYERVSGRTSPPLLDR 2404
Query: 100 CRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRP 159
R P + PS+ T R + + G P L P + + R P PSA ++R
Sbjct: 2405 ARSRTPPSAPSQSRMTSERA---PSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRC 2461
Query: 160 RLA 162
+A
Sbjct: 2462 LIA 2464
>gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo
sapiens]
Length = 177
Score = 37.7 bits (86), Expect = 0.009
Identities = 46/137 (33%), Positives = 55/137 (40%), Gaps = 31/137 (22%)
Query: 70 FLVPALAGLGVPRRSLPDQDGCGGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGR 129
FL+ +LA L V R++ R G+GP P RG P G R +A GR
Sbjct: 6 FLMSSLARLRVSARTV----------RPAMLAGLGPGPSPRRG-RLPSGGLRLRARP-GR 53
Query: 130 GAEPRFGLSLPRRSELRKP----RPSAAPRRTRPRLAALPVSAPLAP-RPAAAEAAFQEL 184
A L LP EL P SA+PR PVS AP RP A ++
Sbjct: 54 RA-----LGLPSPLELAAPSLVPNASASPR---------PVSCRRAPPRPVPGAARWRGR 99
Query: 185 SRNRPHVTAGPATALKR 201
RP AGPA R
Sbjct: 100 PEPRPGSPAGPAPTRAR 116
>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 380
Score = 37.7 bits (86), Expect = 0.009
Identities = 59/226 (26%), Positives = 80/226 (35%), Gaps = 21/226 (9%)
Query: 29 PLIAYKEKAGALRGPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSLPDQ 88
P A + G LRG AP A R P R G P+ VP + +P
Sbjct: 61 PAGAGRRWRGGLRGGFAPA-AARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGA 119
Query: 89 DGCGGTRRRG--RCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELR 146
G R G R R + + + SE R Q R A PR +
Sbjct: 120 RGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTG-PRHASPG 178
Query: 147 KPRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQE--------LSRNRPHVTAGPATA 198
RP+ RR+RPRL P S P P P A + +R +PH+
Sbjct: 179 ARRPAPGARRSRPRLLR-PASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCAR 237
Query: 199 LK----RLG---RNTQASGKTGVCHLRTTTTTTHSTLKTPCDPGMH 237
L+ R+G Q + +T HL+ + + S L P P H
Sbjct: 238 LELEGARMGERLHRRQGAPETACIHLQVSISKNASEL-NPKFPQCH 282
>gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo
sapiens]
Length = 177
Score = 37.7 bits (86), Expect = 0.009
Identities = 46/137 (33%), Positives = 55/137 (40%), Gaps = 31/137 (22%)
Query: 70 FLVPALAGLGVPRRSLPDQDGCGGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGR 129
FL+ +LA L V R++ R G+GP P RG P G R +A GR
Sbjct: 6 FLMSSLARLRVSARTV----------RPAMLAGLGPGPSPRRG-RLPSGGLRLRARP-GR 53
Query: 130 GAEPRFGLSLPRRSELRKP----RPSAAPRRTRPRLAALPVSAPLAP-RPAAAEAAFQEL 184
A L LP EL P SA+PR PVS AP RP A ++
Sbjct: 54 RA-----LGLPSPLELAAPSLVPNASASPR---------PVSCRRAPPRPVPGAARWRGR 99
Query: 185 SRNRPHVTAGPATALKR 201
RP AGPA R
Sbjct: 100 PEPRPGSPAGPAPTRAR 116
>gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo
sapiens]
Length = 244
Score = 37.7 bits (86), Expect = 0.009
Identities = 40/141 (28%), Positives = 50/141 (35%), Gaps = 3/141 (2%)
Query: 66 PSPRFLVPALAGLGVPRRSLPDQ-DGCGGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQA 124
P PRFL G P LP + G TR+ R R + P + PR +
Sbjct: 24 PRPRFLATPRVP-GTPTYQLPPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLAS 82
Query: 125 ATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQEL 184
R A PR PR P P + + R +AA PV P APRP
Sbjct: 83 RDRRRPAIPRASPDRPRPISPAPPGPPTSRQSPRISVAAAPV-LPAAPRPPTQRRCVPVA 141
Query: 185 SRNRPHVTAGPATALKRLGRN 205
R P G +R R+
Sbjct: 142 QRGLPLCGTGLGLETRRPARS 162
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 37.4 bits (85), Expect = 0.012
Identities = 67/220 (30%), Positives = 81/220 (36%), Gaps = 44/220 (20%)
Query: 5 REGMGLFLPRSWRTDDKVPRSRGHPLIAYKEKAGALRGPEAPTR-------GAEVRELPH 57
R G GL S + +VPR R L + + A GP +R G R
Sbjct: 132 RAGGGLTKYNSAHSSSRVPRPR---LPSQRRGASCGLGPGPESRAARQGLGGRSARARTR 188
Query: 58 LRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDG-CGGTRRRGRCRGIGPSAQPSRGSETP 116
P + P P P + Q G GTR R R G G +A RG
Sbjct: 189 RGPHRTRRPEPG-----------PHHTGARQAGPLPGTRGRTRAAGTGSAA---RGPARH 234
Query: 117 RRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAA--PRRTRPRLAALPVSA------ 168
RG AA R GLS P RS L PR S A P R P AL SA
Sbjct: 235 LRGGSVAAAAAARC----LGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRV 290
Query: 169 --PLAPRPAAAEAAFQELSR---NRPHVTAGPATALKRLG 203
+ RPA+ A Q +R +RP + A A +R G
Sbjct: 291 NWNQSSRPASHNA--QRAARHIPSRPRASGLRARAARRPG 328
Score = 34.7 bits (78), Expect = 0.078
Identities = 47/182 (25%), Positives = 63/182 (34%), Gaps = 15/182 (8%)
Query: 37 AGALRGPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPA----LAGLGVPRRSLPDQDGCG 92
+G RGP + P +PG + SPR +PA A PR S P
Sbjct: 69 SGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGA 128
Query: 93 GTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEP-----------RFGLSLPR 141
G R G SA S PR +++ A+ G G P R + R
Sbjct: 129 GNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTR 188
Query: 142 RSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQELSRNRPHVTAGPATALKR 201
R R RP P T R A R A +A + +R+ + A A +
Sbjct: 189 RGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARC 248
Query: 202 LG 203
LG
Sbjct: 249 LG 250
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 37.4 bits (85), Expect = 0.012
Identities = 54/203 (26%), Positives = 70/203 (34%), Gaps = 27/203 (13%)
Query: 37 AGALRGPEAPTRGA---EVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGG 93
A L G AP+ R P G LP PR L +G RR ++ G
Sbjct: 200 AAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRG 259
Query: 94 TRRRGRCRG-----IGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKP 148
RR+G G GP+A G R WRK+ G G PR G P
Sbjct: 260 -RRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGG--GPGVSPREGAQGEGVRGGVTP 316
Query: 149 RPSAAPRRTRPRLAALPVSAP------LAPRPAAAEAAFQELSRNRPHVTAGPA------ 196
R + RP A AP PR +A A +E+ H + P
Sbjct: 317 RARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGG--HTASNPTYEPLSS 374
Query: 197 --TALKRLGRNTQASGKTGVCHL 217
T GR++ +S T +L
Sbjct: 375 RRTKAPSEGRDSPSSPATSTHYL 397
Score = 31.6 bits (70), Expect = 0.66
Identities = 50/169 (29%), Positives = 64/169 (37%), Gaps = 19/169 (11%)
Query: 34 KEKAGALRGPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDGCG- 92
+E GA A GA + LP R G + R P A G PR + CG
Sbjct: 58 REWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAP-GAPRA----RGSCGR 112
Query: 93 --GTRRRGRCRGIG--PSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELR-- 146
G RRR G P+A R R ++G P G SLPRR R
Sbjct: 113 EPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHC 172
Query: 147 ----KPRPSAAPRRTRPRLAALP---VSAPLAPRPAAAEAAFQELSRNR 188
+ RP P +PRL + ++APLA A + + F R R
Sbjct: 173 RCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRR 221
Score = 30.4 bits (67), Expect = 1.5
Identities = 34/115 (29%), Positives = 40/115 (34%), Gaps = 25/115 (21%)
Query: 66 PSPRFLVPALAGLGVPRRSLPDQDGCGGTRRRGRC--RGIGPSAQPSRGSETPRRGWRKQ 123
PS PA A P R R RC R +G +PS G PRR R+
Sbjct: 122 PSSAGKRPAAAARAAPPRQ----------RSLARCLPRSVGSCVRPSVGPSLPRRHCRRH 171
Query: 124 AATLGR--------GAEPRFGLSLPRR-----SELRKPRPSAAPRRTRPRLAALP 165
R +PR G + P R + R P S PRR R R P
Sbjct: 172 CRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSP 226
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 37.4 bits (85), Expect = 0.012
Identities = 47/144 (32%), Positives = 59/144 (40%), Gaps = 22/144 (15%)
Query: 46 PTRGAEVRELPHLRPGGSS----LPSP---RFLVPALAGLGVPRRSLPDQDGCGGTRRRG 98
P +G+E+ R GGSS LP+P R PA G P R G G T+ G
Sbjct: 359 PAQGSELWARAE-RHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVG 417
Query: 99 RCRGIGPSAQPSRGSETPRRGWRK-QAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRT 157
RG G + + RRG R + + RG +P L P P + PR
Sbjct: 418 SGRGSGVTHSVGTHALATRRGSRAPRPVGVLRG--------VPHFRPLSSPAPQSPPRSP 469
Query: 158 R-----PRLAALPVSAPLAPRPAA 176
PRL A +S P APR AA
Sbjct: 470 SVRAFGPRLGAGRLSCPQAPRAAA 493
Score = 31.2 bits (69), Expect = 0.86
Identities = 34/116 (29%), Positives = 42/116 (36%), Gaps = 31/116 (26%)
Query: 41 RGPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPALAG----LGVPRRSLPDQDGC----- 91
RG AP +R +PH RP S P P++ LG R S P
Sbjct: 437 RGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPG 496
Query: 92 ------------GGTRRRGRCRGIGPSAQP--SRGSETPRRG----WRKQAATLGR 129
GG RC G G +QP R +E +RG WR Q +L R
Sbjct: 497 IAVLAPSPAHDWGGQ----RCEGCGGGSQPFAGRRAERGKRGAGVPWRTQTLSLLR 548
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 37.4 bits (85), Expect = 0.012
Identities = 67/220 (30%), Positives = 81/220 (36%), Gaps = 44/220 (20%)
Query: 5 REGMGLFLPRSWRTDDKVPRSRGHPLIAYKEKAGALRGPEAPTR-------GAEVRELPH 57
R G GL S + +VPR R L + + A GP +R G R
Sbjct: 132 RAGGGLTKYNSAHSSSRVPRPR---LPSQRRGASCGLGPGPESRAARQGLGGRSARARTR 188
Query: 58 LRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDG-CGGTRRRGRCRGIGPSAQPSRGSETP 116
P + P P P + Q G GTR R R G G +A RG
Sbjct: 189 RGPHRTRRPEPG-----------PHHTGARQAGPLPGTRGRTRAAGTGSAA---RGPARH 234
Query: 117 RRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAA--PRRTRPRLAALPVSA------ 168
RG AA R GLS P RS L PR S A P R P AL SA
Sbjct: 235 LRGGSVAAAAAARC----LGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRV 290
Query: 169 --PLAPRPAAAEAAFQELSR---NRPHVTAGPATALKRLG 203
+ RPA+ A Q +R +RP + A A +R G
Sbjct: 291 NWNQSSRPASHNA--QRAARHIPSRPRASGLRARAARRPG 328
Score = 34.7 bits (78), Expect = 0.078
Identities = 47/182 (25%), Positives = 63/182 (34%), Gaps = 15/182 (8%)
Query: 37 AGALRGPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPA----LAGLGVPRRSLPDQDGCG 92
+G RGP + P +PG + SPR +PA A PR S P
Sbjct: 69 SGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGA 128
Query: 93 GTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEP-----------RFGLSLPR 141
G R G SA S PR +++ A+ G G P R + R
Sbjct: 129 GNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTR 188
Query: 142 RSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQELSRNRPHVTAGPATALKR 201
R R RP P T R A R A +A + +R+ + A A +
Sbjct: 189 RGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARC 248
Query: 202 LG 203
LG
Sbjct: 249 LG 250
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.4 bits (85), Expect = 0.012
Identities = 54/203 (26%), Positives = 70/203 (34%), Gaps = 27/203 (13%)
Query: 37 AGALRGPEAPTRGA---EVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGG 93
A L G AP+ R P G LP PR L +G RR ++ G
Sbjct: 294 AAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRG 353
Query: 94 TRRRGRCRG-----IGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKP 148
RR+G G GP+A G R WRK+ G G PR G P
Sbjct: 354 -RRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGG--GPGVSPREGAQGEGVRGGVTP 410
Query: 149 RPSAAPRRTRPRLAALPVSAP------LAPRPAAAEAAFQELSRNRPHVTAGPA------ 196
R + RP A AP PR +A A +E+ H + P
Sbjct: 411 RARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGG--HTASNPTYEPLSS 468
Query: 197 --TALKRLGRNTQASGKTGVCHL 217
T GR++ +S T +L
Sbjct: 469 RRTKAPSEGRDSPSSPATSTHYL 491
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 37.4 bits (85), Expect = 0.012
Identities = 47/144 (32%), Positives = 59/144 (40%), Gaps = 22/144 (15%)
Query: 46 PTRGAEVRELPHLRPGGSS----LPSP---RFLVPALAGLGVPRRSLPDQDGCGGTRRRG 98
P +G+E+ R GGSS LP+P R PA G P R G G T+ G
Sbjct: 359 PAQGSELWARAE-RHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVG 417
Query: 99 RCRGIGPSAQPSRGSETPRRGWRK-QAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRT 157
RG G + + RRG R + + RG +P L P P + PR
Sbjct: 418 SGRGSGVTHSVGTHALATRRGSRAPRPVGVLRG--------VPHFRPLSSPAPQSPPRSP 469
Query: 158 R-----PRLAALPVSAPLAPRPAA 176
PRL A +S P APR AA
Sbjct: 470 SVRAFGPRLGAGRLSCPQAPRAAA 493
Score = 31.2 bits (69), Expect = 0.86
Identities = 34/116 (29%), Positives = 42/116 (36%), Gaps = 31/116 (26%)
Query: 41 RGPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPALAG----LGVPRRSLPDQDGC----- 91
RG AP +R +PH RP S P P++ LG R S P
Sbjct: 437 RGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPG 496
Query: 92 ------------GGTRRRGRCRGIGPSAQP--SRGSETPRRG----WRKQAATLGR 129
GG RC G G +QP R +E +RG WR Q +L R
Sbjct: 497 IAVLAPSPAHDWGGQ----RCEGCGGGSQPFAGRRAERGKRGAGVPWRTQTLSLLR 548
>gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo
sapiens]
Length = 159
Score = 37.4 bits (85), Expect = 0.012
Identities = 48/179 (26%), Positives = 64/179 (35%), Gaps = 35/179 (19%)
Query: 30 LIAYKEKAGALRGPEAP---------TRGAEVRELPHLRPGGSSLPSPRFLVPALAGLGV 80
L+ + + GP AP T R + +RP G + P P L L G G
Sbjct: 2 LLPVRVRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRA-PGPGTLF--LLGKGS 58
Query: 81 PRRSLPDQDGCGGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLP 140
PR + P+A+ S GS PR + G G P SLP
Sbjct: 59 PRLAQH------------------PAARRSHGSRLPRTSGSPEEGVSGHG--PAAAASLP 98
Query: 141 RRSELRKPRPSAAPR---RTRPRLAALPVSAPLAPRPAAAEAAFQELSRNRPHVTAGPA 196
R P A P+ RT P +LP + AP A+ A +R R + PA
Sbjct: 99 RAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASGALRSGRTRARSKMRTKPA 157
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 37.4 bits (85), Expect = 0.012
Identities = 67/220 (30%), Positives = 81/220 (36%), Gaps = 44/220 (20%)
Query: 5 REGMGLFLPRSWRTDDKVPRSRGHPLIAYKEKAGALRGPEAPTR-------GAEVRELPH 57
R G GL S + +VPR R L + + A GP +R G R
Sbjct: 132 RAGGGLTKYNSAHSSSRVPRPR---LPSQRRGASCGLGPGPESRAARQGLGGRSARARTR 188
Query: 58 LRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDG-CGGTRRRGRCRGIGPSAQPSRGSETP 116
P + P P P + Q G GTR R R G G +A RG
Sbjct: 189 RGPHRTRRPEPG-----------PHHTGARQAGPLPGTRGRTRAAGTGSAA---RGPARH 234
Query: 117 RRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAA--PRRTRPRLAALPVSA------ 168
RG AA R GLS P RS L PR S A P R P AL SA
Sbjct: 235 LRGGSVAAAAAARC----LGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRV 290
Query: 169 --PLAPRPAAAEAAFQELSR---NRPHVTAGPATALKRLG 203
+ RPA+ A Q +R +RP + A A +R G
Sbjct: 291 NWNQSSRPASHNA--QRAARHIPSRPRASGLRARAARRPG 328
Score = 34.7 bits (78), Expect = 0.078
Identities = 47/182 (25%), Positives = 63/182 (34%), Gaps = 15/182 (8%)
Query: 37 AGALRGPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPA----LAGLGVPRRSLPDQDGCG 92
+G RGP + P +PG + SPR +PA A PR S P
Sbjct: 69 SGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGA 128
Query: 93 GTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEP-----------RFGLSLPR 141
G R G SA S PR +++ A+ G G P R + R
Sbjct: 129 GNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTR 188
Query: 142 RSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQELSRNRPHVTAGPATALKR 201
R R RP P T R A R A +A + +R+ + A A +
Sbjct: 189 RGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARC 248
Query: 202 LG 203
LG
Sbjct: 249 LG 250
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.4 bits (85), Expect = 0.012
Identities = 54/203 (26%), Positives = 70/203 (34%), Gaps = 27/203 (13%)
Query: 37 AGALRGPEAPTRGA---EVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGG 93
A L G AP+ R P G LP PR L +G RR ++ G
Sbjct: 294 AAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRG 353
Query: 94 TRRRGRCRG-----IGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKP 148
RR+G G GP+A G R WRK+ G G PR G P
Sbjct: 354 -RRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGG--GPGVSPREGAQGEGVRGGVTP 410
Query: 149 RPSAAPRRTRPRLAALPVSAP------LAPRPAAAEAAFQELSRNRPHVTAGPA------ 196
R + RP A AP PR +A A +E+ H + P
Sbjct: 411 RARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGG--HTASNPTYEPLSS 468
Query: 197 --TALKRLGRNTQASGKTGVCHL 217
T GR++ +S T +L
Sbjct: 469 RRTKAPSEGRDSPSSPATSTHYL 491
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 37.4 bits (85), Expect = 0.012
Identities = 53/193 (27%), Positives = 70/193 (36%), Gaps = 33/193 (17%)
Query: 61 GGSSLPSPRFLVPALA-----GLGVPRRSLPDQDGCGGTRRRGRCRGIGPSAQPSRGSET 115
GG+ P ++ L G G PR S DG G RR+ R P A PS GS
Sbjct: 243 GGAGRPLDGYISALLRRRRRRGAGQPRTSPGGADG--GPRRQNSVRQRPPDASPSPGSAR 300
Query: 116 PRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPA 175
P R + + G P +L R+ AAP P A P +P R
Sbjct: 301 PAR----EPSLERVGGHPTSPAAL-SRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLV 355
Query: 176 ------AAEAAFQEL-----SRNRPHVTAGPAT----------ALKRLGRNTQASGKTGV 214
A+AA + L R P +T G + A R GR +ASG+ G
Sbjct: 356 KAQYIPGAQAATRGLPGRAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGS 415
Query: 215 CHLRTTTTTTHST 227
R + + T
Sbjct: 416 PRARKASRSQSET 428
Score = 34.3 bits (77), Expect = 0.10
Identities = 43/134 (32%), Positives = 51/134 (38%), Gaps = 28/134 (20%)
Query: 36 KAGALRGPEAPTRG----AEVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDGC 91
KA + G +A TRG A R+ P L G S SP P AG
Sbjct: 356 KAQYIPGAQAATRGLPGRAARRKPPPLTRGRSVEQSPPRERPRAAG-------------- 401
Query: 92 GGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAAT--LGRGAEPRFGLSLPRRSELRKPR 149
RRGR A RGS R+ R Q+ T LGR + G +E +PR
Sbjct: 402 ----RRGRMA----EASGRRGSPRARKASRSQSETSLLGRASAVPSGPPKYPTAEREEPR 453
Query: 150 PSAAPRRTRPRLAA 163
P R P LAA
Sbjct: 454 PPRPRRGPAPTLAA 467
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 37.0 bits (84), Expect = 0.016
Identities = 50/161 (31%), Positives = 65/161 (40%), Gaps = 29/161 (18%)
Query: 61 GGSSLP--SPRFLVPALAGLGVPRRSLPDQDGCGGTRRRGRCRGIGPSAQPSRGSETPR- 117
GG+++P +PR G R S P G G + GP + P R S T R
Sbjct: 66 GGATIPESAPR--------AGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP 117
Query: 118 -----RGWRKQA-ATLGRG----AEPRFGLSLPRRSELRKPRP-SAAPRRTRPRLAA--- 163
+G R A T+ RG A R LS R + P P + +P R AA
Sbjct: 118 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 177
Query: 164 --LPVSAPLA-PRPAAAEAAFQELSRNRPHVTAGPATALKR 201
LP AP A PRP E + +S H T P+ A +R
Sbjct: 178 VGLPRPAPSARPRP-PTEGPRKSVSSASEHSTTEPSPAARR 217
Score = 30.4 bits (67), Expect = 1.5
Identities = 50/192 (26%), Positives = 65/192 (33%), Gaps = 28/192 (14%)
Query: 37 AGALRGPEAPTRG-----------AEVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSL 85
AGA R PT G A E+ RP S+ P P P + S
Sbjct: 149 AGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHST 208
Query: 86 PD-------QDGCGGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRF--- 135
+ + GG +R R + SA P +P R T A P
Sbjct: 209 TEPSPAARRRPSAGGGLQRPASRSLSSSATPL---SSPARSGPSARGTPRAPAHPSQPKP 265
Query: 136 -GLSLPRRSELRKPRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQELSRNRPHVTAG 194
GL R ++ PR AAP + L +P AP +A + Q L P T
Sbjct: 266 KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLP--SPPATP- 322
Query: 195 PATALKRLGRNT 206
P+ A LG T
Sbjct: 323 PSQATTSLGSPT 334
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 37.0 bits (84), Expect = 0.016
Identities = 47/161 (29%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 42 GPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPALAGLGVPRRSLPDQDGCGGTRR-RGRC 100
GP P+ G ++ + P + P P A P+ P GC R + R
Sbjct: 875 GPRGPSSGHPLKSKAGVTPESKAPP------PLPAATPDPQTPRPGDRGCPARGRPKTRS 928
Query: 101 RGIGPSAQ--PSRGSETPRRG-----WRKQ------AATLGRGAEPRFGLSLPRRSELRK 147
G+ P+ PS+G + RRG +RK A G G R PRR++
Sbjct: 929 LGLAPTEADAPSQGRQQ-RRGKQLKLFRKDLDSGGAAEGSGSGGGGRASGLRPRRNDGLG 987
Query: 148 PRPSAAPRRTRPRLAALPVSAPLAPRPAAAEAAFQELSRNR 188
RP PRR PR A A APR A A +E +R
Sbjct: 988 ERPPPRPRR--PRTQAPGSRADPAPRVPRAAALPEETRSSR 1026
Score = 27.7 bits (60), Expect = 9.5
Identities = 39/142 (27%), Positives = 48/142 (33%), Gaps = 10/142 (7%)
Query: 40 LRGPEAPTRGAEVRELPHLRPGGSSLPSPRFLV-----PALAGLGVPRRSLPDQDGCGGT 94
L GP+ +RGA P P G S SP A VP P G G
Sbjct: 2275 LPGPDPQSRGAPPHTNPDRMPRGHSSYSPSNTARLGHREGQAVTAVPTEP-PTLQGAGPD 2333
Query: 95 RRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRR---SELRKPRPS 151
+G S++ TP G R A + R P GL L R S S
Sbjct: 2334 SPACLEGEMGTSSKEPEDPGTPETG-RSGATKMPRVTCPSTGLGLGRTTAPSSTASDFQS 2392
Query: 152 AAPRRTRPRLAALPVSAPLAPR 173
+P+ R P PL P+
Sbjct: 2393 DSPQSHRNASHQTPQGDPLGPQ 2414
>gi|31542984 inter-alpha (globulin) inhibitor H4 [Homo sapiens]
Length = 930
Score = 37.0 bits (84), Expect = 0.016
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 104 GPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPR--PSAAPRRTRPRL 161
G S +PRRGW +QA G R G+ R+ L P P A RL
Sbjct: 631 GAKIPKPEASFSPRRGWNRQAGAAGSRMNFRPGVLSSRQLGLPGPPDVPDHAAYHPFRRL 690
Query: 162 AALPVSAPLA---PRPAAA 177
A LP SAP A P PA +
Sbjct: 691 AILPASAPPATSNPDPAVS 709
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 36.6 bits (83), Expect = 0.021
Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 20/118 (16%)
Query: 103 IGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLA 162
+ A+P G + RR W + RG P G K RPS+ R + P +
Sbjct: 192 VAEGARPRPGPTSSRRPWGRAGGLRPRGKRPARG----------KKRPSSQRRCSSP--S 239
Query: 163 ALPVSAPLAPRPAAAEAAFQELS----RNR---PHVTAGPATALKRLGRNTQASGKTG 213
A SA APRP A + Q S R R PH AG A + G G G
Sbjct: 240 AARASATSAPRPTAPSSVAQPSSARSQRRRAPCPH-RAGGADGVGSHGARAPGEGSAG 296
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 36.6 bits (83), Expect = 0.021
Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 20/118 (16%)
Query: 103 IGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLA 162
+ A+P G + RR W + RG P G K RPS+ R + P +
Sbjct: 192 VAEGARPRPGPTSSRRPWGRAGGLRPRGKRPARG----------KKRPSSQRRCSSP--S 239
Query: 163 ALPVSAPLAPRPAAAEAAFQELS----RNR---PHVTAGPATALKRLGRNTQASGKTG 213
A SA APRP A + Q S R R PH AG A + G G G
Sbjct: 240 AARASATSAPRPTAPSSVAQPSSARSQRRRAPCPH-RAGGADGVGSHGARAPGEGSAG 296
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 36.6 bits (83), Expect = 0.021
Identities = 51/191 (26%), Positives = 60/191 (31%), Gaps = 21/191 (10%)
Query: 23 PRSRGHPL-IAYKEKAGALRGPEAPTRGAEVRELPHLRPGGSSLPSPRFLVPALAGLGVP 81
P S+ P + KE+ G E P G L L G L +P F GL +P
Sbjct: 846 PHSKAAPGDVKVKEERGEDEASEPPAGGLHPAPL-QLGLGRERLGAPGFAWEPFRGLELP 904
Query: 82 RRSLPDQDGCGGTRRRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRF------ 135
RR+ P G + P +P R E + L R P
Sbjct: 905 RRAFP-----AAAPAPGSAALLEPPERPYRDREPHGYSPERLRGELERARAPHLPPAAPA 959
Query: 136 --GLSLPRRSELRKPRPSAAP------RRTRPRLAALPVSAPLAPRPAAAEAAFQELSRN 187
G LP L PR S A RT P AAL PL SR
Sbjct: 960 LDGALLPSLGALHFPRLSPAALHNGLLARTPPAAAALGAPPPLVTAAGPPTPPGPPRSRT 1019
Query: 188 RPHVTAGPATA 198
P GP A
Sbjct: 1020 TPLGGLGPGEA 1030
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,092,196
Number of Sequences: 37866
Number of extensions: 732088
Number of successful extensions: 4206
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 408
Number of HSP's that attempted gapping in prelim test: 3818
Number of HSP's gapped (non-prelim): 793
length of query: 246
length of database: 18,247,518
effective HSP length: 100
effective length of query: 146
effective length of database: 14,460,918
effective search space: 2111294028
effective search space used: 2111294028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.