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Search of human proteins with 239754822
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo
sapiens]
(329 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo sap... 658 0.0
gi|212549593 hypothetical protein LOC653333 [Homo sapiens] 605 e-173
gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens] 591 e-169
gi|134133220 hypothetical protein LOC85002 [Homo sapiens] 526 e-150
gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens] 508 e-144
gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo sapiens] 142 4e-34
gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens] 137 1e-32
gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo sapiens] 95 1e-19
gi|239758137 PREDICTED: hypothetical protein [Homo sapiens] 58 1e-08
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 55 7e-08
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas... 55 7e-08
gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens] 52 6e-07
gi|188528686 hypothetical protein LOC151194 [Homo sapiens] 50 3e-06
gi|188528684 hypothetical protein LOC151194 [Homo sapiens] 50 3e-06
gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens] 45 7e-05
gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens] 45 7e-05
gi|94536786 hypothetical protein LOC79091 [Homo sapiens] 43 3e-04
gi|13376109 hypothetical protein LOC79823 [Homo sapiens] 40 0.002
gi|58293779 hypothetical protein LOC196541 [Homo sapiens] 40 0.003
gi|126012513 hypothetical protein LOC124512 [Homo sapiens] 35 0.092
gi|16306530 cadherin 10, type 2 preproprotein [Homo sapiens] 35 0.12
gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens] 32 1.0
gi|15553097 hypothetical protein MGC9084 [Homo sapiens] 31 1.3
gi|209529731 hypothetical protein LOC254013 [Homo sapiens] 31 1.7
gi|209529729 hypothetical protein LOC254013 [Homo sapiens] 31 1.7
gi|28603834 hypothetical protein LOC254013 [Homo sapiens] 31 1.7
gi|23397642 GREB1 protein isoform a [Homo sapiens] 30 2.3
gi|41393547 neuroblastoma-amplified protein [Homo sapiens] 30 3.0
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 30 3.9
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 30 3.9
>gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo
sapiens]
Length = 329
Score = 658 bits (1697), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC
Sbjct: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLLPWGGSV 120
VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLLPWGGSV
Sbjct: 61 VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLLPWGGSV 120
Query: 121 TXSESTAIISHGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
T SESTAIISHGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TXSESTAIISHGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
Query: 181 PRAYIFSDPHSRVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVATVHQLSAFHP 240
PRAYIFSDPHSRVLEQLQGNVLLNGLSLEADITGN SPRVTVAQLDWDVATVHQLSAFHP
Sbjct: 181 PRAYIFSDPHSRVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVATVHQLSAFHP 240
Query: 241 DVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQAG 300
DVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQAG
Sbjct: 241 DVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQAG 300
Query: 301 IRWEAEAHHDQKLFPYGEHLEMAMLNLTL 329
IRWEAEAHHDQKLFPYGEHLEMAMLNLTL
Sbjct: 301 IRWEAEAHHDQKLFPYGEHLEMAMLNLTL 329
>gi|212549593 hypothetical protein LOC653333 [Homo sapiens]
Length = 330
Score = 605 bits (1559), Expect = e-173
Identities = 304/330 (92%), Positives = 311/330 (94%), Gaps = 1/330 (0%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
M PEENAGT+LLLQ FE RFL RTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC
Sbjct: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLLPWGGSV 120
VK PPSVKYA CFLSELIKKHEAVHTEPLD+LYE LAETLMAKESTQGH+SYLL GGSV
Sbjct: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLSSGGSV 120
Query: 121 TXSESTAIISHGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
T S+STAIISHGTTG VTWD ALYL EWAIENPAAFINRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
Query: 181 PRAYIFSDPHSRVLEQLQGNVLLNGLSLEADITGN-XSPRVTVAQLDWDVATVHQLSAFH 239
PRAYIFSDPHSR+LEQL+GNVLLNGLSLEADITGN SPRVTVAQLDWDVA VHQLSAF
Sbjct: 181 PRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 240
Query: 240 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQA 299
PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELG+
Sbjct: 241 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 300
Query: 300 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 329
GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL
Sbjct: 301 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 330
>gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens]
Length = 330
Score = 591 bits (1523), Expect = e-169
Identities = 298/330 (90%), Positives = 308/330 (93%), Gaps = 1/330 (0%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
M PEENAGT+LLLQSFE RFL ARTLRSFPWQSLEAKLRDSSDSELLRDIL KTV+HPVC
Sbjct: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
Query: 61 VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLLPWGGSV 120
VK PPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGH+SYLLP GGSV
Sbjct: 61 VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSV 120
Query: 121 TXSESTAIISHGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
T SESTAIIS+GTTG VTWD ALYL EWAIENPA F NRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 180
Query: 181 PRAYIFSDPHSRVLEQLQGNVLLNGLSLEADITGN-XSPRVTVAQLDWDVATVHQLSAFH 239
PRAYIFSD HSRVLEQL+GNVLLNGLSLEADIT SPRVTVAQLDWDVATVHQLSAF
Sbjct: 181 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 240
Query: 240 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQA 299
PDVVIAADVLYCPEAI+SLVGVL+RLAACREH+RAPEVYVAFTVRNPETCQLFTTELG+A
Sbjct: 241 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 300
Query: 300 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 329
GIRWE E H+QKLFPY EHLEMAMLNLTL
Sbjct: 301 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 330
>gi|134133220 hypothetical protein LOC85002 [Homo sapiens]
Length = 296
Score = 526 bits (1356), Expect = e-150
Identities = 274/330 (83%), Positives = 278/330 (84%), Gaps = 35/330 (10%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
M PEENAGT+LLLQ FE RFL RTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC
Sbjct: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLLPWGGSV 120
VK PPSVKYA CFLSELIKK GGSV
Sbjct: 61 VKHPPSVKYAWCFLSELIKKSS----------------------------------GGSV 86
Query: 121 TXSESTAIISHGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
T S+STAIISHGTTG VTWD ALYL EWAIENPAAFINRTVLELGSGAGLTGLAICKMCR
Sbjct: 87 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 146
Query: 181 PRAYIFSDPHSRVLEQLQGNVLLNGLSLEADITGNX-SPRVTVAQLDWDVATVHQLSAFH 239
PRAYIFSDPHSRVLEQL+GNVLLNGLSLEADITGN SPRVTVAQLDWDVA VHQLSAF
Sbjct: 147 PRAYIFSDPHSRVLEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 206
Query: 240 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQA 299
PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELG+
Sbjct: 207 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 266
Query: 300 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 329
GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL
Sbjct: 267 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 296
>gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens]
Length = 296
Score = 508 bits (1308), Expect = e-144
Identities = 265/330 (80%), Positives = 274/330 (83%), Gaps = 35/330 (10%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
M PEENAGT+LLLQSFE RFL ARTLRSFPWQSLEAKLRDSSDSELLRDIL KTV+HPVC
Sbjct: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
Query: 61 VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLLPWGGSV 120
VK PPSVKYARCFLSELIKK P GGSV
Sbjct: 61 VKHPPSVKYARCFLSELIKK----------------------------------PSGGSV 86
Query: 121 TXSESTAIISHGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
T SESTAIIS+GTTG VTWD ALYL EWAIENPA F NRTVLELGSGAGLTGLAICKMCR
Sbjct: 87 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 146
Query: 181 PRAYIFSDPHSRVLEQLQGNVLLNGLSLEADITGNX-SPRVTVAQLDWDVATVHQLSAFH 239
PRAYIFSD HSRVLEQL+GNVLLNGLSLEADIT SPRVTVAQLDWDVATVHQLSAF
Sbjct: 147 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 206
Query: 240 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQA 299
PDVVIAADVLYCPEAI+SLVGVL+RLAACREH+RAPEVYVAFTVRNPETCQLFTTELG+A
Sbjct: 207 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 266
Query: 300 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 329
GIRWE E H+QKLFPY EHLEMAMLNLTL
Sbjct: 267 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 296
>gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo
sapiens]
Length = 158
Score = 142 bits (358), Expect = 4e-34
Identities = 71/88 (80%), Positives = 77/88 (87%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
M PEENAG++LLLQSF+ RFL AR LRSF WQSLEAKLRDSSDSELLRDILQKTV+HPVC
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKTVKHPVC 60
Query: 61 VKPPPSVKYARCFLSELIKKHEAVHTEP 88
VK PPSVKYARCFLSELIKK + +P
Sbjct: 61 VKHPPSVKYARCFLSELIKKTCCIAQKP 88
>gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens]
Length = 165
Score = 137 bits (345), Expect = 1e-32
Identities = 76/114 (66%), Positives = 80/114 (70%), Gaps = 27/114 (23%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
M PEENAG++LLLQSF+ RFL AR LRSF WQSLEAKLRDSSDSELLRDILQ
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQ-------- 52
Query: 61 VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLL 114
KHEAVHTEPLDELYE L ETLMAKESTQGH+SYLL
Sbjct: 53 -------------------KHEAVHTEPLDELYEVLVETLMAKESTQGHRSYLL 87
>gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo
sapiens]
Length = 131
Score = 94.7 bits (234), Expect = 1e-19
Identities = 49/70 (70%), Positives = 56/70 (80%), Gaps = 4/70 (5%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
M PEENAG++LLLQSF+ RFL AR LRSF WQSLEAKLRDSSDSELLRDILQKT C
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT----CC 56
Query: 61 VKPPPSVKYA 70
+ PS +++
Sbjct: 57 IAQKPSCRWS 66
>gi|239758137 PREDICTED: hypothetical protein [Homo sapiens]
Length = 89
Score = 57.8 bits (138), Expect = 1e-08
Identities = 26/32 (81%), Positives = 27/32 (84%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQ 32
M PEENAGT+LLLQ FE RFL RTLRSFPWQ
Sbjct: 25 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQ 56
>gi|169217659 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 55.5 bits (132), Expect = 7e-08
Identities = 25/32 (78%), Positives = 27/32 (84%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQ 32
M PEENAGT+L LQ FE RFL AR+LRSFPWQ
Sbjct: 416 MAPEENAGTELWLQGFERRFLAARSLRSFPWQ 447
>gi|169167316 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 55.5 bits (132), Expect = 7e-08
Identities = 25/32 (78%), Positives = 27/32 (84%)
Query: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQ 32
M PEENAGT+L LQ FE RFL AR+LRSFPWQ
Sbjct: 416 MAPEENAGTELWLQGFERRFLAARSLRSFPWQ 447
>gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens]
Length = 226
Score = 52.4 bits (124), Expect = 6e-07
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 132 GTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHS 191
G RV WD AL L + F + V+ELG+G G+ G+ + + I P
Sbjct: 51 GVAARV-WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI-LAALQGGDVTITDLP-- 106
Query: 192 RVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVATVHQLSAFHPDVVIAADVLYC 251
LEQ+QGNV +A++ +V L W + H + + D+V+ AD++Y
Sbjct: 107 LALEQIQGNV-------QANVPAGGQAQVRA--LSWGID--HHVFPANYDLVLGADIVYL 155
Query: 252 PEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTEL 296
L+G LQ L CR H +Y+A +R + F L
Sbjct: 156 EPTFPLLLGTLQHL--CRPH---GTIYLASKMRKEHGTESFFQHL 195
>gi|188528686 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 50.1 bits (118), Expect = 3e-06
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 131 HGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPH 190
H V WD A+ L + R+ +ELG+G GL G+ + A++
Sbjct: 39 HLGVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALL---GAHVTITDR 95
Query: 191 SRVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVATVHQLSAFHP---DVVIAAD 247
LE L+ NV +A++ + + V +L W L +F P D+++ AD
Sbjct: 96 KVALEFLKSNV-------QANLPPHIQTKTVVKELTWG----QNLGSFSPGEFDLILGAD 144
Query: 248 VLYCPEAIVSLVGVLQRLAACREH 271
++Y E L+ L+ L C H
Sbjct: 145 IIYLEETFTDLLQTLEHL--CSNH 166
>gi|188528684 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 50.1 bits (118), Expect = 3e-06
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 131 HGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPH 190
H V WD A+ L + R+ +ELG+G GL G+ + A++
Sbjct: 39 HLGVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALL---GAHVTITDR 95
Query: 191 SRVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVATVHQLSAFHP---DVVIAAD 247
LE L+ NV +A++ + + V +L W L +F P D+++ AD
Sbjct: 96 KVALEFLKSNV-------QANLPPHIQTKTVVKELTWG----QNLGSFSPGEFDLILGAD 144
Query: 248 VLYCPEAIVSLVGVLQRLAACREH 271
++Y E L+ L+ L C H
Sbjct: 145 IIYLEETFTDLLQTLEHL--CSNH 166
>gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens]
Length = 194
Score = 45.4 bits (106), Expect = 7e-05
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Query: 130 SHGTTGRVTWDTALYLVEWAIENPA-------AFINRTVLELGSGAGLTGLAICKMCRPR 182
S G G V WD A+ L ++ +E P A R+VLELGSG G GL
Sbjct: 34 SSGGVGCVVWDAAIVLSKY-LETPEFSGDGAHALSRRSVLELGSGTGAVGLM-------A 85
Query: 183 AYIFSDPHSRVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVATVHQLSAF--HP 240
A + +D LE+LQ + +N + +TG+ +V L W ++ F P
Sbjct: 86 ATLGADVVVTDLEELQDLLKMNINMNKHLVTGSVQAKV----LKWG----EEIEGFPSPP 137
Query: 241 DVVIAADVLYCPEAIVSLVGVLQRLA 266
D ++ AD +Y E++ L+ L+ ++
Sbjct: 138 DFILMADCIYYEESLEPLLKTLKDIS 163
>gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens]
Length = 229
Score = 45.4 bits (106), Expect = 7e-05
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Query: 130 SHGTTGRVTWDTALYLVEWAIENPA-------AFINRTVLELGSGAGLTGLAICKMCRPR 182
S G G V WD A+ L ++ +E P A R+VLELGSG G GL
Sbjct: 34 SSGGVGCVVWDAAIVLSKY-LETPEFSGDGAHALSRRSVLELGSGTGAVGLM-------A 85
Query: 183 AYIFSDPHSRVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVATVHQLSAF--HP 240
A + +D LE+LQ + +N + +TG+ +V L W ++ F P
Sbjct: 86 ATLGADVVVTDLEELQDLLKMNINMNKHLVTGSVQAKV----LKWG----EEIEGFPSPP 137
Query: 241 DVVIAADVLYCPEAIVSLVGVLQRLA 266
D ++ AD +Y E++ L+ L+ ++
Sbjct: 138 DFILMADCIYYEESLEPLLKTLKDIS 163
>gi|94536786 hypothetical protein LOC79091 [Homo sapiens]
Length = 404
Score = 43.1 bits (100), Expect = 3e-04
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 21/146 (14%)
Query: 135 GRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRVL 194
G+ W AL L ++ + F T LELG+G GL + M R +D + +L
Sbjct: 183 GKQVWRGALLLADYILFRQDLFRGCTALELGAGTGLASIIAATMA--RTVYCTDVGADLL 240
Query: 195 EQLQGNVLLNGLSLEADITGNXSPRVTVAQLDW---DVAT---------VHQLSAF--HP 240
Q N+ LN + + V V +LDW D+ T ++S H
Sbjct: 241 SMCQRNIALN-----SHLAATGGGIVRVKELDWLKDDLCTDPKVPFSWSQEEISDLYDHT 295
Query: 241 DVVIAADVLYCPEAIVSLVGVLQRLA 266
++ AA+V Y + ++ L RLA
Sbjct: 296 TILFAAEVFYDDDLTDAVFKTLSRLA 321
>gi|13376109 hypothetical protein LOC79823 [Homo sapiens]
Length = 323
Score = 40.4 bits (93), Expect = 0.002
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 15/197 (7%)
Query: 128 IISHGTTGRVT-WDTALYLVEWAIENPAAFINRTVLELGSGAG-LTGLAICKMCRPRAYI 185
+ S TG V W + L + +++ F V ELG G L GL + + +
Sbjct: 116 LTSFDNTGNVCIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVL 175
Query: 186 FSDPHSRVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVAT-VHQLSAFHPDVVI 244
+D + + + +Q + N +A + + +++ L WD T V QL H D+V+
Sbjct: 176 LTDGNEKAIRNVQDIITRNQ---KAGVF--KTQKISSCVLRWDNETDVSQLEG-HFDIVM 229
Query: 245 AADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQAGIRWE 304
AD L+ + SLV ++RL R + F R T F +AG +
Sbjct: 230 CADCLFLDQYRASLVDAIKRLLQPRGKA------MVFAPRRGNTLNQFCNLAEKAGFCIQ 283
Query: 305 AEAHHDQKLFPYGEHLE 321
++D+ + + L+
Sbjct: 284 RHENYDEHISNFHSKLK 300
>gi|58293779 hypothetical protein LOC196541 [Homo sapiens]
Length = 264
Score = 40.0 bits (92), Expect = 0.003
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 135 GRVTWDTALYLVEWAIENPAA--FINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSR 192
G V W A+ L ++ E+ F + +LE+G+G GL + + A + +
Sbjct: 88 GAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASIL---GAQVTATDLPD 144
Query: 193 VLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDW--DVATVHQLSAFHPDVVIAADVLY 250
VL LQ N+L N L A + V +L W D+ SAF+ D V+A+DV+Y
Sbjct: 145 VLGNLQYNLLKNTLQCTAHLP-------EVKELVWGEDLDKNFPKSAFYYDYVLASDVVY 197
>gi|126012513 hypothetical protein LOC124512 [Homo sapiens]
Length = 190
Score = 35.0 bits (79), Expect = 0.092
Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 139 WDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRVLEQLQ 198
W A+ L ++ + + + +LE+G+G L G+ K S LE +
Sbjct: 4 WPCAVVLAQYLWFHRRSLPGKAILEIGAGVSLPGILAAKCGAEVILSDSSELPHCLEVCR 63
Query: 199 GNVLLNGLSLEADITGNXSPRVTVAQLDWDVATVHQLSAFHPDVVIAADVLYCPEAIVSL 258
+ +N L P + V L W + L+ D+++A+DV + PE +
Sbjct: 64 QSCQMNNL-----------PHLQVVGLTWGHISWDLLALPPQDIILASDVFFEPEDFEDI 112
Query: 259 VGVL 262
+ +
Sbjct: 113 LATI 116
>gi|16306530 cadherin 10, type 2 preproprotein [Homo sapiens]
Length = 788
Score = 34.7 bits (78), Expect = 0.12
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 43 DSELLRDILQKTVRHPVCVKPPPSVKYARCFLSELIKKHEAVHT-EPLDEL----YE--- 94
+ +L RDI+ +T+ P P R F++E +K+H+ T P D L YE
Sbjct: 683 EKKLRRDIIPETLFIPRRTPTAPDNTDVRDFINERLKEHDLDPTAPPYDSLATYAYEGND 742
Query: 95 ALAETLMAKES--TQGHQS--YLLPWG 117
++AE+L + ES T+G Q+ YL WG
Sbjct: 743 SIAESLSSLESGTTEGDQNYDYLREWG 769
>gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens]
Length = 149
Score = 31.6 bits (70), Expect = 1.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 132 GTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGL 173
G RV WD AL L + F + V+ELG+G G+ G+
Sbjct: 51 GVAARV-WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI 91
>gi|15553097 hypothetical protein MGC9084 [Homo sapiens]
Length = 372
Score = 31.2 bits (69), Expect = 1.3
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 95 ALAETLMAKESTQGHQSYLLPWGGSVTXSESTAIISHGTTGRVTWDTALYLVEWAIENPA 154
++ +T++ KE+ G + S S I G W+ L+ + +
Sbjct: 130 SVVKTILLKENFPGENIVSKSFS-----SHSDLITGVYEGGLKIWECTFDLLAYFTKAKV 184
Query: 155 AFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRVLEQLQ-GNVLLN 204
F + VL+LG G+GL G+ K + F D +S V++++ NV+ N
Sbjct: 185 KFAGKKVLDLGCGSGLLGITAFKGGSKEIH-FQDYNSMVIDEVTLPNVVAN 234
>gi|209529731 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 30.8 bits (68), Expect = 1.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 137 VTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLA 174
+ W L + ++NP ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|209529729 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 30.8 bits (68), Expect = 1.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 137 VTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLA 174
+ W L + ++NP ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|28603834 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 30.8 bits (68), Expect = 1.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 137 VTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLA 174
+ W L + ++NP ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|23397642 GREB1 protein isoform a [Homo sapiens]
Length = 1949
Score = 30.4 bits (67), Expect = 2.3
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 259 VGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQAG-IRWEAEA-------HHD 310
VG++ RL CRE K AP + P Q T + I W A H +
Sbjct: 792 VGLVDRLLNCREVKEAPNIVTLHVTSFPYALQTQHTLISPYNEIHWPASCSNGVDLYHEN 851
Query: 311 QKLFPYGEHLEMAM 324
+K F E +E +
Sbjct: 852 KKYFGLSEFIESTL 865
>gi|41393547 neuroblastoma-amplified protein [Homo sapiens]
Length = 2371
Score = 30.0 bits (66), Expect = 3.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 42 SDSELLRDILQKTVRHPVCVKPPPSVKYARCFLSELIKKHEAVHT-EPLDELYEALAETL 100
S SE R ++ + RH +PP S + R L +++ + V+T D YE E+L
Sbjct: 1067 SSSEEARKLMVRLTRHTGRKQPPVSESHWRTLLQDMLTMQQNVYTCLDSDACYEIFTESL 1126
Query: 101 M 101
+
Sbjct: 1127 L 1127
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 29.6 bits (65), Expect = 3.9
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 189 PHSRVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVATVHQLSAFHPDVVIAADV 248
P S +E L LS DITG+ + +AQ+ D A + + S HP+ IA
Sbjct: 4597 PPSWHMESSDTGKLKYTLSYLNDITGDSNRTKYMAQIQKDKANISEKSVMHPE-YIAVKA 4655
Query: 249 LYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTT 294
P + + LQ + ++ ++A E V V +TC T+
Sbjct: 4656 EKSPLSHILKTKELQ-VNISQQGEKAQEGEVEIVVLLSKTCPFVTS 4700
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.6 bits (65), Expect = 3.9
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 189 PHSRVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVATVHQLSAFHPDVVIAADV 248
P S +E L LS DITG+ + +AQ+ D A + + S HP+ IA
Sbjct: 4445 PPSWHMESSDTGKLKYTLSYLNDITGDSNRTKYMAQIQKDKANISEKSVMHPE-YIAVKA 4503
Query: 249 LYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTT 294
P + + LQ + ++ ++A E V V +TC T+
Sbjct: 4504 EKSPLSHILKTKELQ-VNISQQGEKAQEGEVEIVVLLSKTCPFVTS 4548
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,314,878
Number of Sequences: 37866
Number of extensions: 501964
Number of successful extensions: 1214
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1181
Number of HSP's gapped (non-prelim): 43
length of query: 329
length of database: 18,247,518
effective HSP length: 103
effective length of query: 226
effective length of database: 14,347,320
effective search space: 3242494320
effective search space used: 3242494320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.