Guide to the Human Genome
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Name: NBAS Sequence: fasta or formatted (2371aa) NCBI GI: 41393547
Description:

neuroblastoma-amplified protein

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        169           2
 C cysteine            2.4         58           2
 D aspartate           4.9        115           2
 E glutamate           8.6        203           3
 F phenylalanine       2.9         68           2
 G glycine             4.7        112           2
 H histidine           2.9         69           2
 I isoleucine          4.4        104           2
 K lysine              5.9        140           2
 L leucine            13.5        320           4
 M methionine          1.9         44           2
 N asparagine          2.8         66           2
 P proline             4.6        109           2
 Q glutamine           5.0        119           2
 R arginine            4.9        116           2
 S serine              7.6        180           3
 T threonine           5.4        127           5
 V valine              5.5        131           2
 W tryptophan          1.5         36           2
 Y tyrosine            3.6         85           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuroblastoma-amplified protein 
PDE4DIP               0.003   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.003   phosphodiesterase 4D interacting protein isoform 5 [...
PDE4DIP               0.003   phosphodiesterase 4D interacting protein isoform 1 ...
OFD1                  0.002   oral-facial-digital syndrome 1 
UACA                  0.002   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.002   uveal autoantigen with coiled-coil domains and ankyr...
KNTC1                 0.002   Rough Deal homolog, centromere/kinetochore protein [H...
CDGAP                 0.002   Cdc42 GTPase-activating protein 
KLHDC9                0.002   kelch/ankyrin repeat containing cyclin A1 interactin...
KLHDC9                0.002   kelch/ankyrin repeat containing cyclin A1 interactin...
LOC727927             0.002   PREDICTED: similar to phosphodiesterase 4D interact...
PDE4DIP               0.002   phosphodiesterase 4D interacting protein isoform 4 [...
PDE4DIP               0.002   phosphodiesterase 4D interacting protein isoform 3 [...
RTF1                  0.002   Paf1/RNA polymerase II complex component 
ZNF605                0.002   zinc finger protein 605 
WDR67                 0.002   WD repeat domain 67 isoform 1 
WDR67                 0.002   WD repeat domain 67 isoform 2 
DNAJC2                0.002   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ...
NLRP1                 0.002   NLR family, pyrin domain containing 1 isoform 2 [Homo...
NLRP1                 0.002   NLR family, pyrin domain containing 1 isoform 4 [Hom...
NLRP1                 0.002   NLR family, pyrin domain containing 1 isoform 5 [Hom...
NLRP1                 0.002   NLR family, pyrin domain containing 1 isoform 3 [Hom...
NLRP1                 0.002   NLR family, pyrin domain containing 1 isoform 1 [Hom...
PI4KA                 0.002   phosphatidylinositol 4-kinase type 3 alpha isoform ...
AHI1                  0.002   Abelson helper integration site 1 isoform b 
AHI1                  0.002   Abelson helper integration site 1 isoform a 
AHI1                  0.002   Abelson helper integration site 1 isoform a 
AHI1                  0.002   Abelson helper integration site 1 isoform a 
ZNF521                0.002   zinc finger protein 521 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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