Guide to the Human Genome
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Search of human proteins with 239754520

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754520 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 2 [Homo sapiens]
         (136 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754520 PREDICTED: similar to golgi autoantigen, golgin sub...   268   1e-72
gi|239749081 PREDICTED: hypothetical protein XP_002346905 [Homo ...   268   1e-72
gi|239508762 PREDICTED: similar to golgi autoantigen, golgin sub...   268   1e-72
gi|239743107 PREDICTED: hypothetical protein XP_002342738 [Homo ...   266   4e-72
gi|239745087 PREDICTED: similar to Golgin subfamily A member 8-l...   179   6e-46
gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo s...   170   4e-43
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l...   163   5e-41
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l...   162   6e-41
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein...   162   6e-41
gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein...   162   6e-41
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l...   162   1e-40
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l...   161   1e-40
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l...   161   1e-40
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l...   161   1e-40
gi|113425119 PREDICTED: similar to golgi autoantigen, golgin sub...   161   1e-40
gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-l...   140   3e-34
gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-l...   140   3e-34
gi|169208458 PREDICTED: similar to golgi autoantigen, golgin sub...   136   6e-33
gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo sap...   136   6e-33
gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo sap...   136   6e-33
gi|154937324 hypothetical protein LOC440295 [Homo sapiens]            136   6e-33
gi|239745299 PREDICTED: hypothetical protein [Homo sapiens]           135   8e-33
gi|239745083 PREDICTED: similar to Golgin subfamily A member 8-l...   135   1e-32
gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-l...   129   7e-31
gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-l...   127   3e-30
gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-l...   127   3e-30
gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein...   127   3e-30
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap...   125   1e-29
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi...   125   1e-29
gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-l...   122   7e-29

>gi|239754520 PREDICTED: similar to golgi autoantigen, golgin
           subfamily a, 2 [Homo sapiens]
          Length = 136

 Score =  268 bits (685), Expect = 1e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG
Sbjct: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLVIMANILVFVFPKCIVI 120
           IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLVIMANILVFVFPKCIVI
Sbjct: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLVIMANILVFVFPKCIVI 120

Query: 121 DLNRNVDTEISKMSMG 136
           DLNRNVDTEISKMSMG
Sbjct: 121 DLNRNVDTEISKMSMG 136


>gi|239749081 PREDICTED: hypothetical protein XP_002346905 [Homo
           sapiens]
          Length = 136

 Score =  268 bits (685), Expect = 1e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG
Sbjct: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLVIMANILVFVFPKCIVI 120
           IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLVIMANILVFVFPKCIVI
Sbjct: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLVIMANILVFVFPKCIVI 120

Query: 121 DLNRNVDTEISKMSMG 136
           DLNRNVDTEISKMSMG
Sbjct: 121 DLNRNVDTEISKMSMG 136


>gi|239508762 PREDICTED: similar to golgi autoantigen, golgin
           subfamily a, 2 [Homo sapiens]
          Length = 136

 Score =  268 bits (685), Expect = 1e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG
Sbjct: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLVIMANILVFVFPKCIVI 120
           IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLVIMANILVFVFPKCIVI
Sbjct: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLVIMANILVFVFPKCIVI 120

Query: 121 DLNRNVDTEISKMSMG 136
           DLNRNVDTEISKMSMG
Sbjct: 121 DLNRNVDTEISKMSMG 136


>gi|239743107 PREDICTED: hypothetical protein XP_002342738 [Homo
           sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG
Sbjct: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLVIMANILVFVFPKCIVI 120
           IHGEGPTSSATLKDLESPCQELAVVLD RSIKISQLNNTIKSLVIMANILVFVFPKCIVI
Sbjct: 61  IHGEGPTSSATLKDLESPCQELAVVLDPRSIKISQLNNTIKSLVIMANILVFVFPKCIVI 120

Query: 121 DLNRNVDTEISKMSMG 136
           DLNRNVDTEISKMSMG
Sbjct: 121 DLNRNVDTEISKMSMG 136


>gi|239745087 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 547

 Score =  179 bits (454), Expect = 6e-46
 Identities = 90/103 (87%), Positives = 93/103 (90%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEETRQSKLA AK KLKEYWQRNS GVPAG KRNRKT+GS  ETATSGGCHSP DSATG
Sbjct: 13  MAEETRQSKLAAAKRKLKEYWQRNSPGVPAGAKRNRKTNGSIHETATSGGCHSPGDSATG 72

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
           IHGE PTSSATLKDLESPCQELAVV DSRS+K+SQL NTIKSL
Sbjct: 73  IHGESPTSSATLKDLESPCQELAVVPDSRSVKVSQLKNTIKSL 115


>gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo
           sapiens]
          Length = 1052

 Score =  170 bits (430), Expect = 4e-43
 Identities = 85/103 (82%), Positives = 91/103 (88%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           +AEETRQSKLA+A  KLKEYWQ+NS  VP G KRNRKT+GS PETATSGGC SP DSATG
Sbjct: 26  IAEETRQSKLAVANTKLKEYWQKNSPRVPEGAKRNRKTNGSIPETATSGGCQSPGDSATG 85

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
           IHGEGPTSSATLKDLESPCQE AVVL+ RS+KISQL NTIKSL
Sbjct: 86  IHGEGPTSSATLKDLESPCQEPAVVLNPRSVKISQLKNTIKSL 128


>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 632

 Score =  163 bits (412), Expect = 5e-41
 Identities = 81/103 (78%), Positives = 89/103 (86%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+NS  VPAG  RNRKT+GS P+TATSGGC  P DSATG
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSIPQTATSGGCQPPGDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
            H EGPTSSATLKDLESPCQE AVVLDSRS++ISQL NTIKSL
Sbjct: 61  FHREGPTSSATLKDLESPCQERAVVLDSRSVEISQLKNTIKSL 103


>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 630

 Score =  162 bits (411), Expect = 6e-41
 Identities = 81/103 (78%), Positives = 88/103 (85%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+NS  VPAG  RNRKT+GS PE ATSGGC  P DSATG
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSIPEKATSGGCQPPRDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
            H EGPTSSATLKDLESPCQE AVVLDSRS++ISQL NTIKSL
Sbjct: 61  FHREGPTSSATLKDLESPCQERAVVLDSRSVEISQLKNTIKSL 103


>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
           [Homo sapiens]
          Length = 580

 Score =  162 bits (411), Expect = 6e-41
 Identities = 81/103 (78%), Positives = 88/103 (85%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+NS  VPAG  RNRKT+GS PE ATSGGC  P DSATG
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSIPEKATSGGCQPPRDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
            H EGPTSSATLKDLESPCQE AVVLDSRS++ISQL NTIKSL
Sbjct: 61  FHREGPTSSATLKDLESPCQERAVVLDSRSVEISQLKNTIKSL 103


>gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein 3
           isoform 1 [Homo sapiens]
          Length = 632

 Score =  162 bits (411), Expect = 6e-41
 Identities = 81/103 (78%), Positives = 88/103 (85%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+NS  VPAG  RNRKT+GS PE ATSGGC  P DSATG
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSIPEKATSGGCQPPRDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
            H EGPTSSATLKDLESPCQE AVVLDSRS++ISQL NTIKSL
Sbjct: 61  FHREGPTSSATLKDLESPCQERAVVLDSRSVEISQLKNTIKSL 103


>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 632

 Score =  162 bits (409), Expect = 1e-40
 Identities = 81/103 (78%), Positives = 88/103 (85%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+NS  VPAG  RNRKT+GS PE ATSGGC  P DSATG
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSVPEKATSGGCQPPGDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
            H EGPTSSATLKDLESPCQE AVVLDSRS++ISQL NTIKSL
Sbjct: 61  FHREGPTSSATLKDLESPCQERAVVLDSRSVEISQLKNTIKSL 103


>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 3 [Homo sapiens]
          Length = 632

 Score =  161 bits (408), Expect = 1e-40
 Identities = 81/103 (78%), Positives = 88/103 (85%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+N   VPAGV RNRKT+GS PETATSGGC  P DSATG
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRKTNGSIPETATSGGCQPPGDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
            H EGPTSSATLKDLESPCQE AVVLDS S+KIS+L NTIKSL
Sbjct: 61  FHREGPTSSATLKDLESPCQERAVVLDSTSVKISRLKNTIKSL 103


>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 3 [Homo sapiens]
          Length = 632

 Score =  161 bits (408), Expect = 1e-40
 Identities = 81/103 (78%), Positives = 88/103 (85%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+N   VPAGV RNRKT+GS PETATSGGC  P DSATG
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRKTNGSIPETATSGGCQPPGDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
            H EGPTSSATLKDLESPCQE AVVLDS S+KIS+L NTIKSL
Sbjct: 61  FHREGPTSSATLKDLESPCQERAVVLDSTSVKISRLKNTIKSL 103


>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 4 [Homo sapiens]
          Length = 632

 Score =  161 bits (408), Expect = 1e-40
 Identities = 81/103 (78%), Positives = 88/103 (85%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+N   VPAGV RNRKT+GS PETATSGGC  P DSATG
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRKTNGSIPETATSGGCQPPGDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
            H EGPTSSATLKDLESPCQE AVVLDS S+KIS+L NTIKSL
Sbjct: 61  FHREGPTSSATLKDLESPCQERAVVLDSTSVKISRLKNTIKSL 103


>gi|113425119 PREDICTED: similar to golgi autoantigen, golgin
           subfamily a, 8E isoform 2 [Homo sapiens]
          Length = 631

 Score =  161 bits (408), Expect = 1e-40
 Identities = 81/103 (78%), Positives = 88/103 (85%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+N   VPAGV RNRKT+GS PETATSGGC  P DSATG
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRKTNGSIPETATSGGCQPPGDSATG 60

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
            H EGPTSSATLKDLESPCQE AVVLDS S+KIS+L NTIKSL
Sbjct: 61  FHREGPTSSATLKDLESPCQERAVVLDSTSVKISRLKNTIKSL 103


>gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 3 [Homo sapiens]
          Length = 601

 Score =  140 bits (353), Expect = 3e-34
 Identities = 74/103 (71%), Positives = 83/103 (80%), Gaps = 8/103 (7%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEETRQSKLA AK KLKEYWQRNS GVPAG KRNRKT+GS  ETATSGGCHSP DS+  
Sbjct: 13  MAEETRQSKLAAAKRKLKEYWQRNSPGVPAGAKRNRKTNGSIHETATSGGCHSPGDSS-- 70

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
                 ++S++L   +SPCQELAVV DSRS+K+SQL NTIKSL
Sbjct: 71  ------STSSSLHAPQSPCQELAVVPDSRSVKVSQLKNTIKSL 107


>gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 2 [Homo sapiens]
          Length = 629

 Score =  140 bits (353), Expect = 3e-34
 Identities = 74/103 (71%), Positives = 83/103 (80%), Gaps = 8/103 (7%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEETRQSKLA AK KLKEYWQRNS GVPAG KRNRKT+GS  ETATSGGCHSP DS+  
Sbjct: 13  MAEETRQSKLAAAKRKLKEYWQRNSPGVPAGAKRNRKTNGSIHETATSGGCHSPGDSS-- 70

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
                 ++S++L   +SPCQELAVV DSRS+K+SQL NTIKSL
Sbjct: 71  ------STSSSLHAPQSPCQELAVVPDSRSVKVSQLKNTIKSL 107


>gi|169208458 PREDICTED: similar to golgi autoantigen, golgin
           subfamily a-like [Homo sapiens]
          Length = 432

 Score =  136 bits (342), Expect = 6e-33
 Identities = 70/104 (67%), Positives = 80/104 (76%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           M+E+T+Q KLA AK+KLK YWQR S G+PAG  R +K +GSSP+TATSGG HSP DSATG
Sbjct: 13  MSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGANRKKKVNGSSPDTATSGGYHSPGDSATG 72

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLV 104
           I+GEG  SS TL+DLES  QELAV LDS S  ISQL   I SLV
Sbjct: 73  IYGEGRASSTTLQDLESQYQELAVALDSSSAIISQLTENINSLV 116


>gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 432

 Score =  136 bits (342), Expect = 6e-33
 Identities = 70/104 (67%), Positives = 80/104 (76%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           M+E+T+Q KLA AK+KLK YWQR S G+PAG  R +K +GSSP+TATSGG HSP DSATG
Sbjct: 13  MSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGANRKKKVNGSSPDTATSGGYHSPGDSATG 72

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLV 104
           I+GEG  SS TL+DLES  QELAV LDS S  ISQL   I SLV
Sbjct: 73  IYGEGRASSTTLQDLESQYQELAVALDSSSAIISQLTENINSLV 116


>gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 479

 Score =  136 bits (342), Expect = 6e-33
 Identities = 70/104 (67%), Positives = 80/104 (76%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           M+E+T+Q KLA AK+KLK YWQR S G+PAG  R +K +GSSP+TATSGG HSP DSATG
Sbjct: 13  MSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGANRKKKVNGSSPDTATSGGYHSPGDSATG 72

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLV 104
           I+GEG  SS TL+DLES  QELAV LDS S  ISQL   I SLV
Sbjct: 73  IYGEGRASSTTLQDLESQYQELAVALDSSSAIISQLTENINSLV 116


>gi|154937324 hypothetical protein LOC440295 [Homo sapiens]
          Length = 432

 Score =  136 bits (342), Expect = 6e-33
 Identities = 70/104 (67%), Positives = 80/104 (76%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           M+E+T+Q KLA AK+KLK YWQR S G+PAG  R +K +GSSP+TATSGG HSP DSATG
Sbjct: 13  MSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGANRKKKVNGSSPDTATSGGYHSPGDSATG 72

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLV 104
           I+GEG  SS TL+DLES  QELAV LDS S  ISQL   I SLV
Sbjct: 73  IYGEGRASSTTLQDLESQYQELAVALDSSSAIISQLTENINSLV 116


>gi|239745299 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 523

 Score =  135 bits (341), Expect = 8e-33
 Identities = 70/104 (67%), Positives = 80/104 (76%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           M+E+T+Q KLA AK+KLK YWQR S G+PAG  R +K +GSSP+TATSGG HSP DSATG
Sbjct: 13  MSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGANRKKKINGSSPDTATSGGYHSPGDSATG 72

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSLV 104
           I+GEG  SS TL+DLES  QELAV LDS S  ISQL   I SLV
Sbjct: 73  IYGEGRASSTTLEDLESQYQELAVALDSSSAIISQLTENINSLV 116


>gi|239745083 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 4 [Homo sapiens]
          Length = 590

 Score =  135 bits (339), Expect = 1e-32
 Identities = 72/103 (69%), Positives = 81/103 (78%), Gaps = 8/103 (7%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEETRQSKLA AK KLKEYWQRNS GVPAG KRNRKT+GS  ETATSGGCHS   S+  
Sbjct: 1   MAEETRQSKLAAAKRKLKEYWQRNSPGVPAGAKRNRKTNGSIHETATSGGCHSSPHSS-- 58

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
                 ++S++L   +SPCQELAVV DSRS+K+SQL NTIKSL
Sbjct: 59  ------STSSSLHAPQSPCQELAVVPDSRSVKVSQLKNTIKSL 95


>gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 2 [Homo sapiens]
          Length = 602

 Score =  129 bits (324), Expect = 7e-31
 Identities = 66/103 (64%), Positives = 82/103 (79%), Gaps = 1/103 (0%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+NS  VPAG  RNRKT+GS P+TATSGGCH P D +  
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSIPQTATSGGCH-PNDCSLY 59

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
           +  +  ++S++L   +SPCQE AVVLDSRS++ISQL NTIKSL
Sbjct: 60  LSPDSCSTSSSLHAPQSPCQERAVVLDSRSVEISQLKNTIKSL 102


>gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 2 [Homo sapiens]
          Length = 601

 Score =  127 bits (319), Expect = 3e-30
 Identities = 66/103 (64%), Positives = 80/103 (77%), Gaps = 1/103 (0%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+NS  VPAG  RNRKT+GS PE ATSGGCH P D +  
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSIPEKATSGGCH-PNDCSLY 59

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
           +     ++S++L   +SPCQE AVVLDSRS++ISQL NTIKSL
Sbjct: 60  LSPHSCSTSSSLHAPQSPCQERAVVLDSRSVEISQLKNTIKSL 102


>gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 [Homo sapiens]
          Length = 602

 Score =  127 bits (319), Expect = 3e-30
 Identities = 66/103 (64%), Positives = 80/103 (77%), Gaps = 1/103 (0%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+NS  VPAG  RNRKT+GS PE ATSGGCH P D +  
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSVPEKATSGGCH-PNDCSLY 59

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
           +     ++S++L   +SPCQE AVVLDSRS++ISQL NTIKSL
Sbjct: 60  LSPHSCSTSSSLHAPQSPCQERAVVLDSRSVEISQLKNTIKSL 102


>gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein 3
           isoform 2 [Homo sapiens]
          Length = 602

 Score =  127 bits (319), Expect = 3e-30
 Identities = 66/103 (64%), Positives = 80/103 (77%), Gaps = 1/103 (0%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET+ +KLA AK+KLKEYWQ+NS  VPAG  RNRKT+GS PE ATSGGCH P D +  
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSIPEKATSGGCH-PNDCSLY 59

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
           +     ++S++L   +SPCQE AVVLDSRS++ISQL NTIKSL
Sbjct: 60  LSPHSCSTSSSLHAPQSPCQERAVVLDSRSVEISQLKNTIKSL 102


>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
           sapiens]
          Length = 603

 Score =  125 bits (314), Expect = 1e-29
 Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 8/103 (7%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET QSKLA AK+K KEYWQRN  GVPA  KRN K +GSSPETA SGGCHS E S+  
Sbjct: 1   MAEETGQSKLAAAKKKFKEYWQRNRPGVPAAAKRNTKANGSSPETAASGGCHSSEASS-- 58

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
                 ++S++L   +SPCQE A VL+SRSIKIS+LN+TIKSL
Sbjct: 59  ------SASSSLHARQSPCQEQAAVLNSRSIKISRLNDTIKSL 95


>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
           sapiens]
          Length = 603

 Score =  125 bits (314), Expect = 1e-29
 Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 8/103 (7%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG 60
           MAEET QSKLA AK+K KEYWQRN  GVPA  KRN K +GSSPETA SGGCHS E S+  
Sbjct: 1   MAEETGQSKLAAAKKKFKEYWQRNRPGVPAAAKRNTKANGSSPETAASGGCHSSEASS-- 58

Query: 61  IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
                 ++S++L   +SPCQE A VL+SRSIKIS+LN+TIKSL
Sbjct: 59  ------SASSSLHARQSPCQEQAAVLNSRSIKISRLNDTIKSL 95


>gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 2 [Homo sapiens]
          Length = 595

 Score =  122 bits (307), Expect = 7e-29
 Identities = 67/104 (64%), Positives = 78/104 (75%), Gaps = 10/104 (9%)

Query: 1   MAEETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCH-SPEDSAT 59
           MAEET+ +KLA AK+KLKEYWQ+N   VPAGV RNRKT+GS PETATSGGCH SP   +T
Sbjct: 1   MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRKTNGSIPETATSGGCHLSPHSCST 60

Query: 60  GIHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQLNNTIKSL 103
                    S++L   +SPCQE AVVLDS S+KIS+L NTIKSL
Sbjct: 61  ---------SSSLHAPQSPCQERAVVLDSTSVKISRLKNTIKSL 95


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.127    0.351 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,777,841
Number of Sequences: 37866
Number of extensions: 204649
Number of successful extensions: 865
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 762
Number of HSP's gapped (non-prelim): 99
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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