Guide to the Human Genome
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Name: LOC100287825 Sequence: fasta or formatted (136aa) NCBI GI: 239508762
Description:

PREDICTED: similar to golgi autoantigen, golgin subfamily a, 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [136aa] PREDICTED: hypothetical protein XP_002342738
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6          9           1
 C cysteine            2.2          3           1
 D aspartate           3.7          5           1
 E glutamate           7.4         10           2
 F phenylalanine       1.5          2           1
 G glycine             6.6          9           2
 H histidine           1.5          2           1
 I isoleucine          7.4         10           1
 K lysine              8.1         11           1
 L leucine             8.1         11           1
 M methionine          2.9          4           1
 N asparagine          5.1          7           2
 P proline             4.4          6           1
 Q glutamine           2.9          4           1
 R arginine            4.4          6           1
 S serine             12.5         17           2
 T threonine           6.6          9           1
 V valine              6.6          9           2
 W tryptophan          0.7          1           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to golgi autoantigen, golgin sub... 
LOC100291991          1.000   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC100290472          1.000   PREDICTED: hypothetical protein XP_002346905 
LOC100287825          0.992   PREDICTED: hypothetical protein XP_002342738 
LOC653061             0.634   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.597   PREDICTED: similar to hect domain and RLD 2 
LOC653720             0.568   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.564   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.564   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653073             0.564   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.564   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.560   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.560   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.560   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.560   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653061             0.473   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.473   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728636             0.457   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC647042             0.457   PREDICTED: hypothetical protein isoform 2 
LOC647042             0.457   PREDICTED: hypothetical protein isoform 1 
LOC440295             0.457   hypothetical protein LOC440295 
LOC100133220          0.453   PREDICTED: hypothetical protein 
LOC653061             0.453   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.428   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.420   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.420   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.420   PREDICTED: Golgin subfamily A member 8-like protein...
GOLGA8B               0.412   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.412   golgi autoantigen, golgin subfamily a, 8A 
LOC728080             0.399   PREDICTED: similar to Golgin subfamily A member 8-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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