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Search of human proteins with 118918415
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118918415 shank-interacting protein-like 1 [Homo sapiens]
(387 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118918415 shank-interacting protein-like 1 [Homo sapiens] 789 0.0
gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1 ... 156 3e-38
gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1 is... 117 2e-26
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 43 6e-04
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 42 7e-04
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 41 0.002
gi|55750053 atrophin-1 [Homo sapiens] 40 0.004
gi|55750041 atrophin-1 [Homo sapiens] 40 0.004
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 39 0.006
gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens] 39 0.008
gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens] 39 0.008
gi|12597625 activating transcription factor 5 [Homo sapiens] 39 0.008
gi|4826964 UV excision repair protein RAD23 homolog A [Homo sapi... 39 0.008
gi|154146199 sal-like 3 [Homo sapiens] 38 0.014
gi|47132519 Ras association and pleckstrin homology domains 1 is... 38 0.014
gi|62860046 zinc finger, RAN-binding domain containing 3 [Homo s... 38 0.014
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho... 38 0.018
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 38 0.018
gi|169167062 PREDICTED: hypothetical protein LOC285556 [Homo sap... 37 0.023
gi|113416182 PREDICTED: hypothetical protein LOC285556 [Homo sap... 37 0.023
gi|113415686 PREDICTED: hypothetical protein LOC285556 [Homo sap... 37 0.023
gi|210031233 PR domain containing 6 [Homo sapiens] 37 0.023
gi|5032105 small optic lobes [Homo sapiens] 37 0.023
gi|153792074 proline rich 12 [Homo sapiens] 37 0.023
gi|157785645 SPEG complex locus [Homo sapiens] 37 0.030
gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo ... 36 0.051
gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo ... 36 0.051
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap... 36 0.051
gi|19924103 synapsin II isoform IIa [Homo sapiens] 36 0.051
gi|4503969 growth differentiation factor 5 preproprotein [Homo s... 36 0.067
>gi|118918415 shank-interacting protein-like 1 [Homo sapiens]
Length = 387
Score = 789 bits (2038), Expect = 0.0
Identities = 387/387 (100%), Positives = 387/387 (100%)
Query: 1 MAPPAGGAAAAASDLGSAAVLLAVHAAVRPLGAGPDAEAQLRRLQLSADPERPGRFRLEL 60
MAPPAGGAAAAASDLGSAAVLLAVHAAVRPLGAGPDAEAQLRRLQLSADPERPGRFRLEL
Sbjct: 1 MAPPAGGAAAAASDLGSAAVLLAVHAAVRPLGAGPDAEAQLRRLQLSADPERPGRFRLEL 60
Query: 61 LGAGPGAVNLEWPLESVSYTIRGPTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGAT 120
LGAGPGAVNLEWPLESVSYTIRGPTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGAT
Sbjct: 61 LGAGPGAVNLEWPLESVSYTIRGPTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGAT 120
Query: 121 VEGQNGSKSNSPPALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLA 180
VEGQNGSKSNSPPALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLA
Sbjct: 121 VEGQNGSKSNSPPALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLA 180
Query: 181 RAIAGGDEKGAAQVAAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHV 240
RAIAGGDEKGAAQVAAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHV
Sbjct: 181 RAIAGGDEKGAAQVAAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHV 240
Query: 241 ALQVHPHCTVAALQEQVFSELGFPPAVQRWVIGRCLCVPERSLASYGVRQDGDPAFLYLL 300
ALQVHPHCTVAALQEQVFSELGFPPAVQRWVIGRCLCVPERSLASYGVRQDGDPAFLYLL
Sbjct: 241 ALQVHPHCTVAALQEQVFSELGFPPAVQRWVIGRCLCVPERSLASYGVRQDGDPAFLYLL 300
Query: 301 SAPREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQPSWSCPSCTFI 360
SAPREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQPSWSCPSCTFI
Sbjct: 301 SAPREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQPSWSCPSCTFI 360
Query: 361 NAPDRPGCEMCSTQRPCTWDPLAAAST 387
NAPDRPGCEMCSTQRPCTWDPLAAAST
Sbjct: 361 NAPDRPGCEMCSTQRPCTWDPLAAAST 387
>gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1
isoform 2 [Homo sapiens]
Length = 510
Score = 156 bits (395), Expect = 3e-38
Identities = 100/224 (44%), Positives = 127/224 (56%), Gaps = 31/224 (13%)
Query: 173 EELAGSLARAIAGGDEKGAAQVAAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAA 232
EE+A SL RA+AGGDE+ A + A LA+ RV LSVQL+ P IRL V++EDA
Sbjct: 9 EEMALSLTRAVAGGDEQVAMKCAIWLAEQRVPLSVQLKPEVSPTQDIRLWVSVEDAQM-- 66
Query: 233 SAASSAHVALQVHPHCTVAALQEQVFSELGFPPAVQRWVIGRCLCVPERSLASYGVRQDG 292
+ + L V P TVA+L++ VF + GFPP +Q+WVIG+ L + +L S+GVRQ+G
Sbjct: 67 ---HTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVRQNG 123
Query: 293 DPAFLYLLSAPREAPATGPSPQHPQ-----KMDGELG------------RLFPPSLGLPP 335
D A+LYLLSA T +PQ Q +M +LG PP G+P
Sbjct: 124 DSAYLYLLSARN----TSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPGPPKPGVPQ 179
Query: 336 GP---QPAASSLPSPLQPSWSCPSCTFINAPDRPGCEMCSTQRP 376
P QP A +P P W CP CTFIN P RPGCEMC RP
Sbjct: 180 EPGRGQPDA--VPEPPPVGWQCPGCTFINKPTRPGCEMCCRARP 221
>gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1
isoform 1 [Homo sapiens]
Length = 468
Score = 117 bits (293), Expect = 2e-26
Identities = 75/177 (42%), Positives = 96/177 (54%), Gaps = 31/177 (17%)
Query: 220 RLQVTLEDAASAASAASSAHVALQVHPHCTVAALQEQVFSELGFPPAVQRWVIGRCLCVP 279
RL V++EDA + + L V P TVA+L++ VF + GFPP +Q+WVIG+ L
Sbjct: 14 RLWVSVEDAQM-----HTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARD 68
Query: 280 ERSLASYGVRQDGDPAFLYLLSAPREAPATGPSPQHPQ-----KMDGELG---------- 324
+ +L S+GVRQ+GD A+LYLLSA T +PQ Q +M +LG
Sbjct: 69 QETLHSHGVRQNGDSAYLYLLSARN----TSLNPQELQRERQLRMLEDLGFKDLTLQPRG 124
Query: 325 --RLFPPSLGLPPGP---QPAASSLPSPLQPSWSCPSCTFINAPDRPGCEMCSTQRP 376
PP G+P P QP A +P P W CP CTFIN P RPGCEMC RP
Sbjct: 125 PLEPGPPKPGVPQEPGRGQPDA--VPEPPPVGWQCPGCTFINKPTRPGCEMCCRARP 179
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 42.7 bits (99), Expect = 6e-04
Identities = 94/366 (25%), Positives = 128/366 (34%), Gaps = 75/366 (20%)
Query: 30 PLGAGPDAEAQLRRLQLSADPERPGRFRLELLGAGPGAV---NLEWPLESVSYTIRG--P 84
PL GP S PE P + AGPG + L P+ S + P
Sbjct: 156 PLNGGPG----------SLPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSSSPRFLP 205
Query: 85 TQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSK-----SNSPPALGPEA 139
+ P P P +SL+ + W +R + V GS S+SPP+ P
Sbjct: 206 RGNAPSPAPPPPPAISLN----APSYNWGAALRSSLVPSDLGSPPAPHASSSPPSDPPLF 261
Query: 140 -CPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKGAAQVAA-- 196
C +L PP PP +LP PG ++ + ++ + G GA V
Sbjct: 262 HCSDALTPPPL-------PPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEGPG 314
Query: 197 ---VLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHVALQVHPHCTVAAL 253
LA ++ + + Q PP P LQ A + +++ SS+ Q P
Sbjct: 315 APPFLASSLLSAAAKAQHPPLPP-PSTLQGRRPRAQAPSASHSSSLRPSQRRPR------ 367
Query: 254 QEQVFSELGFPPAVQRWVIGRCLCVPERS--LASYGVRQDGD---------PAFLYLLSA 302
PP V R + GR P RS A V Q P+ L LL
Sbjct: 368 ---------RPPTVFRLLEGRGPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGL 418
Query: 303 PREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQP-SWSCPSCTFIN 361
P P P H DG L LPP P ++ S P P P S P T +
Sbjct: 419 PT------PGPSH---SDGSF-NLLGSDAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGS 468
Query: 362 APDRPG 367
PG
Sbjct: 469 LSSVPG 474
Score = 32.3 bits (72), Expect = 0.74
Identities = 73/280 (26%), Positives = 94/280 (33%), Gaps = 48/280 (17%)
Query: 47 SADPERPGRFRLELLGAGPGAVNLEWPLESVSYTIRGPTQHELQPPPGGPGTLSLHFLNP 106
SA P L LL GP A + E E GP+ P G G LS P
Sbjct: 615 SAPPSNLLASFLPLLALGPTAGDGEGSAEGAG----GPSGE----PFSGLGDLSPLLFPP 666
Query: 107 QEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVSLPSPPEAS--TLKGPPPEADLPR 164
A + + A + S +PP P P PP +S T P + L +
Sbjct: 667 LSAPPTLIALNSALLAATLDPPSGTPPQ--PCVLSAPQPGPPTSSVTTATTDPGASSLGK 724
Query: 165 SPGNLTEREELAGSLARAIAGGDEKGAAQVAAVLAQHRVALSVQLQEACFPPGPI---RL 221
+P N +L L A GD + L AL LQ PPGP+ +L
Sbjct: 725 APSNSGRPPQLLSPLLGASLLGD-------LSSLTSSPGALPSLLQ----PPGPLLSGQL 773
Query: 222 QVTLEDAASAASAASSAHVALQVHPHCTVAALQEQVFSELGFPPAVQRWVIGRCLCVPER 281
+ L A S A L C + +LQ PP C+P
Sbjct: 774 GLQLLPGGGAPPPLSEASSPLA----CLLQSLQ--------IPPEQP-----EAPCLPPE 816
Query: 282 SLASYGVRQDGDPAFLYLLSAPREAPATGPSPQHPQKMDG 321
S AS + P L AP P P P P+ + G
Sbjct: 817 SPASALEPEPARPPLSAL--AP---PHGSPDPPVPELLTG 851
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 42.4 bits (98), Expect = 7e-04
Identities = 53/170 (31%), Positives = 65/170 (38%), Gaps = 17/170 (10%)
Query: 2 APPAGGAAAAASDLGSAAVLLAVHAAVRPLGAGPDAEAQLRRLQLSADPERPGRFRLELL 61
A P+ + AAS AAV AV AAVRP AGP A A +ADP L
Sbjct: 125 ADPSAASLCAASP--PAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPL 182
Query: 62 GAGPGAVN-LEWPLESVSYTIRGP--------TQHELQPPPGGPGTLSLHFLNPQEAQRW 112
A P A + +V GP +Q P P + +NP A R
Sbjct: 183 AAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARA 242
Query: 113 AVLVRGATVEGQNGSKSNSPPALGPEACPVSLPSPPEASTLKGPPPEADL 162
A A V+ S + SP A PVS P P + PP A+L
Sbjct: 243 AAAPAAACVQ----SVAESPATPLAIAQPVSFPPAPVPCAV--PPLAAEL 286
Score = 40.0 bits (92), Expect = 0.004
Identities = 53/198 (26%), Positives = 76/198 (38%), Gaps = 23/198 (11%)
Query: 23 AVHAAVRPLGAGPDAEAQLRRLQLSADPERPGRFRLELLGAGPGAVNLEWPLESVSYTIR 82
A AAVRP AGP A A +ADP L A P A +
Sbjct: 100 AAPAAVRPPAAGPPAAAPAAVCPAAADPS-----AASLCAASPPA------------AVP 142
Query: 83 GPTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEA-CP 141
++PP GP +L + P A A + A+ + + SP A+ P A CP
Sbjct: 143 AAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAA-SPAAVAPAAVCP 201
Query: 142 VSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKGAAQVAAVLAQH 201
+ + P A++L A +P + + LA + A A AA V +V
Sbjct: 202 GA--AGPSAASLCAASQPAAVP-AAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESP 258
Query: 202 RVALSVQLQEACFPPGPI 219
L++ Q FPP P+
Sbjct: 259 ATPLAI-AQPVSFPPAPV 275
Score = 28.9 bits (63), Expect = 8.2
Identities = 37/136 (27%), Positives = 45/136 (33%), Gaps = 4/136 (2%)
Query: 113 AVLVRGATVEGQNGSKSNSPPALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTER 172
AV R A + PPA P A + P AS PP A P + R
Sbjct: 93 AVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAV--R 150
Query: 173 EELAGSLARAIAGGDEKGAAQVAAVL--AQHRVALSVQLQEACFPPGPIRLQVTLEDAAS 230
AG A A+A A AA L A A+ A P + AAS
Sbjct: 151 PPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAAS 210
Query: 231 AASAASSAHVALQVHP 246
+A+ A V P
Sbjct: 211 LCAASQPAAVPAAASP 226
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 40.8 bits (94), Expect = 0.002
Identities = 53/271 (19%), Positives = 95/271 (35%), Gaps = 15/271 (5%)
Query: 91 PPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVSLPSPPEA 150
P P P + + P+E A V T E + P P + ++P+P E
Sbjct: 1060 PTPEEPTSPAAAVPTPEEPTSPAAAV--PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEP 1117
Query: 151 STLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKGAAQVAAVLAQHRVALSVQLQ 210
++ P + P SP E A A+ +E +A VA + + + +
Sbjct: 1118 ASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVP 1177
Query: 211 EACFPPGPIRLQVTLEDAASAASAASSAHVALQVHPHCTVAALQEQVFSELGFPPAVQRW 270
+ TLE+ S A++ + P VA L+E P + +
Sbjct: 1178 TPAESASFAAVVATLEEPTSPAASVPT--------PAAMVATLEEFTSPAASVPTSEEPA 1229
Query: 271 VIGRCLCVPER----SLASYGVRQDGDPAFLYLLSAPREAPATG-PSPQHPQKMDGELGR 325
+ + PE + A + + A L +PA P+P+ P +
Sbjct: 1230 SLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEPASPAAAVSN 1289
Query: 326 LFPPSLGLPPGPQPAASSLPSPLQPSWSCPS 356
L P+ P P +++P+ P+ P+
Sbjct: 1290 LEEPASPAAAVPTPEVAAIPAASVPTPEVPA 1320
Score = 39.7 bits (91), Expect = 0.005
Identities = 59/274 (21%), Positives = 92/274 (33%), Gaps = 17/274 (6%)
Query: 93 PGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVSLPSPPEAST 152
P GP T + P+E AV V + +P A V P P +
Sbjct: 971 PEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPA 1030
Query: 153 LKGPPPE-----------ADLPRSPGNLTEREELAGSLARAIAGGDEKGAAQVAAVLAQH 201
PPPE + P SP E S A A+ +E + A +
Sbjct: 1031 AAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEE 1090
Query: 202 RVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHVALQVHPHCTVAALQEQVFSEL 261
+ + + P P T E+ AS A+A + P V +E F
Sbjct: 1091 PTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEE--PASPAAAVPTPEEPAFPAP 1148
Query: 262 GFPPAVQRWVIGRCLCVPERSLA-SYGVRQDGDPAFLYLLSAPREAPAT-GPSPQHPQKM 319
P + + PE S + + V + A + A E P + S P M
Sbjct: 1149 AVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAM 1208
Query: 320 DGELGRLFPPSLGLPPGPQPA--ASSLPSPLQPS 351
L P+ +P +PA A+++ +P +P+
Sbjct: 1209 VATLEEFTSPAASVPTSEEPASLAAAVSNPEEPT 1242
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 40.0 bits (92), Expect = 0.004
Identities = 72/303 (23%), Positives = 96/303 (31%), Gaps = 68/303 (22%)
Query: 84 PTQHELQPPPGGP------------GTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNS 131
PT Q PPG P G LS + P+ ++V G NG K +
Sbjct: 201 PTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGA------ASSVGGPNGGKQHP 254
Query: 132 PP-------ALGPEACPVSLP--SPPEASTLKGPPPEADLPRSPGNLTE----------- 171
PP + G P + P +P L PP A+ P NL
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNAS 314
Query: 172 -------REELAGSLARAIAGGDEKG----AAQVAAVLAQHRVALSVQLQEACFPPGPIR 220
+ L G L A G G + LA +L A P P+R
Sbjct: 315 ASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSA--PAPPMR 372
Query: 221 LQVTLEDAASAASAASSAHVALQVHPHCTVAALQEQVFSELGFPPAVQRWVIGRCLCVPE 280
+ ++SAA+++SS+ + P AL S FPP V + +
Sbjct: 373 FPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHS---FPPPTSLSVSNQPPKYTQ 429
Query: 281 RSLASYGVRQDGDPAFLYLLSAPREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPA 340
SL S V G P P S HP FPPS G P
Sbjct: 430 PSLPSQAVWSQGPP------PPPPYGRLLANSNAHPGP--------FPPSTGAQSTAHPP 475
Query: 341 ASS 343
S+
Sbjct: 476 VST 478
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 40.0 bits (92), Expect = 0.004
Identities = 72/303 (23%), Positives = 96/303 (31%), Gaps = 68/303 (22%)
Query: 84 PTQHELQPPPGGP------------GTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNS 131
PT Q PPG P G LS + P+ ++V G NG K +
Sbjct: 201 PTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGA------ASSVGGPNGGKQHP 254
Query: 132 PP-------ALGPEACPVSLP--SPPEASTLKGPPPEADLPRSPGNLTE----------- 171
PP + G P + P +P L PP A+ P NL
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNAS 314
Query: 172 -------REELAGSLARAIAGGDEKG----AAQVAAVLAQHRVALSVQLQEACFPPGPIR 220
+ L G L A G G + LA +L A P P+R
Sbjct: 315 ASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSA--PAPPMR 372
Query: 221 LQVTLEDAASAASAASSAHVALQVHPHCTVAALQEQVFSELGFPPAVQRWVIGRCLCVPE 280
+ ++SAA+++SS+ + P AL S FPP V + +
Sbjct: 373 FPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHS---FPPPTSLSVSNQPPKYTQ 429
Query: 281 RSLASYGVRQDGDPAFLYLLSAPREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPA 340
SL S V G P P S HP FPPS G P
Sbjct: 430 PSLPSQAVWSQGPP------PPPPYGRLLANSNAHPGP--------FPPSTGAQSTAHPP 475
Query: 341 ASS 343
S+
Sbjct: 476 VST 478
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 39.3 bits (90), Expect = 0.006
Identities = 21/53 (39%), Positives = 25/53 (47%)
Query: 299 LLSAPREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQPS 351
LL P E+P + P + P E RL PP LP P P A L PL+ S
Sbjct: 440 LLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEES 492
Score = 36.6 bits (83), Expect = 0.039
Identities = 80/331 (24%), Positives = 110/331 (33%), Gaps = 45/331 (13%)
Query: 47 SADPERPGRFRLELLGAGPGAVNLE----WPLESVSYTIRGPTQHELQPPPGGPGTLSLH 102
S P+ PG + E G V LE PL + P + L PPP T
Sbjct: 403 SMQPKEPGPLQCEAKPLGKAGVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSP-- 460
Query: 103 FLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVSLP-------SPPEASTLKG 155
P EA R + P + PEA +S P PPE S L
Sbjct: 461 ---PPEASRLSP------------PPEELPASPLPEALHLSRPLEESPLSPPPEESPLSP 505
Query: 156 PP---PEADLPRSPGNLTEREELAGSLARAIAGGDEKGAAQVAAVLAQHRVALSVQLQEA 212
PP P + L SP + E + +L ++ E A+ ++ + ++ +
Sbjct: 506 PPESSPFSPLEESPLSPPEESPPSPALETPLSPPPE--ASPLSPPFEESPLSPPPEELPT 563
Query: 213 CFPPGPIRLQVTLEDAASAA----SAASSAHVALQVHPHCTVAALQEQVF-SELGFPPAV 267
PP RL E++ + S S A ++ P + L S L PP
Sbjct: 564 SPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEA 623
Query: 268 QRWVI----GRCLCVPERSLASYGV---RQDGDPAFLYLLSAPREAPATGPSPQHPQKMD 320
R PE S S R P L P E+P + P + P
Sbjct: 624 SRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPP 683
Query: 321 GELGRLFPPSLGLPPGPQPAASSLPSPLQPS 351
E RL PP P P P S P + S
Sbjct: 684 PEASRLSPPPEDSPTSPPPEDSPASPPPEDS 714
Score = 31.6 bits (70), Expect = 1.3
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 17/75 (22%)
Query: 286 YGVRQDGDPAFLYL-------LSAPREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQ 338
+G + D DP +S P EA T P P P + PPS G P G
Sbjct: 961 FGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPM--------ILPPSPGSPVG-- 1010
Query: 339 PAASSLPSPLQPSWS 353
PA+ L PL P S
Sbjct: 1011 PASPILMEPLPPQCS 1025
Score = 28.9 bits (63), Expect = 8.2
Identities = 18/51 (35%), Positives = 20/51 (39%)
Query: 305 EAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQPSWSCP 355
E P + P P E L PP LP P P AS L P + S P
Sbjct: 533 ETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSP 583
Score = 28.9 bits (63), Expect = 8.2
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 301 SAPREAPATGPSPQHPQKMDGELGRLFP-PSLGLPPGPQPAASSLPSPLQPS 351
+ P + GP PQ P ++ G L P LG P P P SS P +PS
Sbjct: 4271 TGPLQELGAGPRPQGPPRLPAPPGALSTGPVLG-PVHPTPPPSSPQEPKRPS 4321
>gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens]
Length = 439
Score = 38.9 bits (89), Expect = 0.008
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 126 GSKSNSPPALGPEACP-VSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIA 184
G+KS SPP P A P + + PE + G P A LP+SP E E+AG A A
Sbjct: 262 GNKSPSPPDGSPAATPEIRVNHEPEPAG--GATPGATLPKSPSQPAEASEVAGGTQPA-A 318
Query: 185 GGDEKGAAQVAAVLAQHRVALSVQ 208
G E G + + A+ V+
Sbjct: 319 GAQEPGETAASEAASSSLPAVVVE 342
>gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens]
Length = 454
Score = 38.9 bits (89), Expect = 0.008
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 126 GSKSNSPPALGPEACP-VSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIA 184
G+KS SPP P A P + + PE + G P A LP+SP E E+AG A A
Sbjct: 277 GNKSPSPPDGSPAATPEIRVNHEPEPAG--GATPGATLPKSPSQPAEASEVAGGTQPA-A 333
Query: 185 GGDEKGAAQVAAVLAQHRVALSVQ 208
G E G + + A+ V+
Sbjct: 334 GAQEPGETAASEAASSSLPAVVVE 357
>gi|12597625 activating transcription factor 5 [Homo sapiens]
Length = 282
Score = 38.9 bits (89), Expect = 0.008
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 71 EWPLESVSYTIRGPTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSN 130
+W E V +T P + PP PGTL P + + A L++ +E +
Sbjct: 65 DWMTERVDFTALLPLE-----PPLPPGTLPQPSPTPPDLEAMASLLK-KELEQMEDFFLD 118
Query: 131 SPPALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKG 190
+PP P P+ P P A +L P DLP+ P + + +L R AG +E G
Sbjct: 119 APPLPPPSPPPLPPPPLPPAPSLPLSLPSFDLPQPP--VLDTLDLLAIYCRNEAGQEEVG 176
>gi|4826964 UV excision repair protein RAD23 homolog A [Homo
sapiens]
Length = 363
Score = 38.9 bits (89), Expect = 0.008
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 126 GSKSNSPPALGPEACPVSLPSPPEAST--LKGPPPEADLPRSPGN----LTEREELAGSL 179
G +++PP P A P S S P A T + PPP A +SP T E ++GS+
Sbjct: 82 GQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSV 141
Query: 180 ARAIAGGDEKGAAQVAAVLAQHRVALS 206
+ + G E+ AA +++ L+
Sbjct: 142 PSSGSSGREEDAASTLVTGSEYETMLT 168
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 38.1 bits (87), Expect = 0.014
Identities = 75/272 (27%), Positives = 95/272 (34%), Gaps = 45/272 (16%)
Query: 123 GQNGSKSNSPPALGPEACPVSLPSPPEASTLKGPPPEADLPRSPG------NLTEREELA 176
G G++ + P + EA P+ P + PPP A P +P N+T L+
Sbjct: 116 GAEGAEGEARP-VEKEAEPMDA-EPAGDTRAPRPPPAAPAPPTPAYGAPSTNVTLEALLS 173
Query: 177 GSLARA-------IAGGDEKG----AAQVAAVLAQ---------HRVALSVQL--QEACF 214
+A A AGG G AA V +L Q H++ L Q+ Q A
Sbjct: 174 TKVAVAQFSQGARAAGGSGAGGGVAAAAVPLILEQLMALQQQQIHQLQLIEQIRSQVALM 233
Query: 215 PPGPIRLQVTLEDAASAASAASSAHVALQVHPHCTVAALQEQVFSELGFPPAVQRWVIGR 274
P R ++ A SA A S L P A S P A + +
Sbjct: 234 QRPPPRPSLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEG---AQ 290
Query: 275 CLCVPERSLASYGVRQDGDPAFLYLLSAPREAPATGPSPQHPQKMDGELGRLFPPSLGLP 334
L PE G G PA +AP APA P+ P P S P
Sbjct: 291 PLSRPES-----GASTPGGPAEPSAPAAPSAAPA--PAAPAPAPAPQSAASSQPQSASTP 343
Query: 335 PGPQP-----AASSLPSPLQPSWSCPSCTFIN 361
P P AA LPSPL P S F N
Sbjct: 344 PALAPGSLLGAAPGLPSPLLPQTSASGVIFPN 375
>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
1 [Homo sapiens]
Length = 1250
Score = 38.1 bits (87), Expect = 0.014
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 15/86 (17%)
Query: 84 PTQHELQPP--PGGPGTLSLHFLN-PQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEAC 140
P++ L PP P PG L+L +N P Q+ V + + G+
Sbjct: 1013 PSKETLPPPAAPPKPGKLNLSGVNLPGVLQQGCVSAKAPVLSGRGKDSV----------- 1061
Query: 141 PVSLPSPPEASTLKGPPPEADLPRSP 166
V PSPP S PPPE +LP P
Sbjct: 1062 -VEFPSPPSDSDFPPPPPETELPLPP 1086
Score = 32.0 bits (71), Expect = 0.97
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 14/80 (17%)
Query: 91 PPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVSLPS---- 146
PPP P + L P A V Q+ + P P + PV P
Sbjct: 870 PPPPTPPAMESQPLKPVPAN----------VAPQSPPAVKAKPKWQPSSIPVPSPDFPPP 919
Query: 147 PPEASTLKGPPPEADLPRSP 166
PPE+S + PPP + +P P
Sbjct: 920 PPESSLVFPPPPPSPVPAPP 939
>gi|62860046 zinc finger, RAN-binding domain containing 3 [Homo
sapiens]
Length = 1079
Score = 38.1 bits (87), Expect = 0.014
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 338 QPAASSLPSPLQP--SWSCPSCTFINAPDRPGCEMCST 373
Q A + L +P P W C CT+IN + P CEMC T
Sbjct: 609 QEAKAQLTTPAFPVEGWQCSLCTYINNSELPYCEMCET 646
>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
sapiens]
Length = 1570
Score = 37.7 bits (86), Expect = 0.018
Identities = 82/344 (23%), Positives = 122/344 (35%), Gaps = 75/344 (21%)
Query: 29 RPLGAGPDAEAQLRRLQ--------LSADPERPGRFRLELLGAGPGAVNLEWPLESVSYT 80
RP A P L+R+Q LSAD + G R L G ++ E ++
Sbjct: 1249 RPKSAEPPRSPLLKRVQSAEKLGASLSAD--KKGALRKHSLEVGHPDFRKDFHGELALHS 1306
Query: 81 IRGPTQHELQPPP----GGPGTLSLHFLNPQEAQRWA----VLVRGATVEGQNGSKSNSP 132
+ + + + PP G P +++ L QE+ +L GA+ + + SP
Sbjct: 1307 L---AESDGETPPVEGLGAPRQVAVRRLGRQESPLSLGADPLLPEGASRPPVSSKEKESP 1363
Query: 133 PALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKGAA 192
G EAC +PP A+T G E D+ + + E+ G +ARA+ A
Sbjct: 1364 G--GAEAC-----TPPRATTPGGRTLERDVGCTRHQSVQTEDGTGGMARAV-------AK 1409
Query: 193 QVAAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHVALQVHPHCTVAA 252
+ + +H EA P PI ++ A + A P +
Sbjct: 1410 AALSPVQEHETGRRSSSGEAGTPLVPIVVEPARPGAKAVVPQPLGADSKGLQEPAPLAPS 1469
Query: 253 LQEQVFSELGFPPAVQRWVIGRCLCVPERSLASYGVRQDGDPAFLYLLSAPREAPAT--- 309
+ E P +RWV+ V ER+ LS PR PA+
Sbjct: 1470 VPEA-------PRGRERWVLE---VVEERT----------------TLSGPRSKPASPKL 1503
Query: 310 GPSPQHPQKMDGELGRLFPPSLGLPPG---PQPAASSLPSPLQP 350
P PQ P L P P P P AS L S +P
Sbjct: 1504 SPEPQTPS--------LAPAKCSAPSSAVTPVPPASLLGSGTKP 1539
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 37.7 bits (86), Expect = 0.018
Identities = 61/224 (27%), Positives = 82/224 (36%), Gaps = 38/224 (16%)
Query: 140 CPVSLPSPPEASTLKGP------PPEADLPRSP--GNLTEREE---LAGSLARAIAGGDE 188
CPV+ PEA P PPEA +P L+ +E+ LA + AG
Sbjct: 1316 CPVAEHPAPEAPESSPPLPLSSLPPEASQDSAPYKDQLSSKEQPSFLASQQLLSQAGPSN 1375
Query: 189 KGAAQVAAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHVALQVHPHC 248
A A LA ++ Q+ P + A+ A + + ++
Sbjct: 1376 PPGAP-PAPLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELETSQ 1434
Query: 249 TVAALQEQVFSELGFPPAVQRWVIGRCLCVPERSLASYGVRQDGDPAFLYLLSAPRE--- 305
+A E P AVQ V+G C P AS +D SAPRE
Sbjct: 1435 PLAETHEA-------PLAVQPLVVGLAPCTPAPEAAS---TRDA--------SAPREPLP 1476
Query: 306 APATGPSPQH--PQKMDGELGRLFPPSLGLPPGPQPAASSLPSP 347
PA PSP PQ G+ L P ++G A S LPSP
Sbjct: 1477 PPAPEPSPHSGTPQPALGQPAPLLPAAVG---AVSLATSQLPSP 1517
Score = 30.8 bits (68), Expect = 2.2
Identities = 56/230 (24%), Positives = 72/230 (31%), Gaps = 40/230 (17%)
Query: 133 PALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKGAA 192
P G + P +LP P A+ PPP+ P A+
Sbjct: 806 PLAGIDGLPPALPDLPTATVPPVPPPQYFSP------------------AVI------LP 841
Query: 193 QVAAVLAQHRVALSVQLQEACFPPG-----PIRLQVTLEDAASAASAASSAHVALQVHPH 247
+AA L AL +Q + PPG P R V A A + VA + H
Sbjct: 842 SLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAA-LSIH 900
Query: 248 CTVAALQEQVFSELGFP-------PAVQRWVIGRCLCVPERSLASYGVRQDGDPAFLYLL 300
VA L Q FP P + P + P
Sbjct: 901 SAVAQLPGQPVYPAAFPQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQP 960
Query: 301 SAPREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQP 350
+ P + P P P P + + PP LPP QPA P PLQP
Sbjct: 961 TLPPQ-PVLPPQPTRPPQPVLPPQPMLPPQPVLPP--QPALPVRPEPLQP 1007
>gi|169167062 PREDICTED: hypothetical protein LOC285556 [Homo
sapiens]
Length = 1826
Score = 37.4 bits (85), Expect = 0.023
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 32/190 (16%)
Query: 83 GPTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPV 142
GP+ PPP GPGT L P+ T E +G+ + + + G A +
Sbjct: 505 GPSDSGPTPPPTGPGTAPLTEPLPE------------TPEAASGAAAAAASSCGSAASQI 552
Query: 143 SLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKG--------AAQV 194
L P + + P R+ N+ + G ++ ++ E AA V
Sbjct: 553 LLSIKPASRAINEP----SNVRAKQNIIYAAKHEGDMSLRVSTAAEHNSSSLKQNPAAAV 608
Query: 195 AAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHVALQVHPHCTVAALQ 254
A A+ +A+ +LQ C G IR + ++ ++ A+SA S A + V L
Sbjct: 609 AQDHAKKFIAVPARLQTRC---GAIRAKELVDYSSGASSAVSELDDADK-----EVRNLT 660
Query: 255 EQVFSELGFP 264
+ F L +P
Sbjct: 661 SRAFRSLAYP 670
>gi|113416182 PREDICTED: hypothetical protein LOC285556 [Homo
sapiens]
Length = 1826
Score = 37.4 bits (85), Expect = 0.023
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 32/190 (16%)
Query: 83 GPTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPV 142
GP+ PPP GPGT L P+ T E +G+ + + + G A +
Sbjct: 505 GPSDSGPTPPPTGPGTAPLTEPLPE------------TPEAASGAAAAAASSCGSAASQI 552
Query: 143 SLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKG--------AAQV 194
L P + + P R+ N+ + G ++ ++ E AA V
Sbjct: 553 LLSIKPASRAINEP----SNVRAKQNIIYAAKHEGDMSLRVSTAAEHNSSSLKQNPAAAV 608
Query: 195 AAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHVALQVHPHCTVAALQ 254
A A+ +A+ +LQ C G IR + ++ ++ A+SA S A + V L
Sbjct: 609 AQDHAKKFIAVPARLQTRC---GAIRAKELVDYSSGASSAVSELDDADK-----EVRNLT 660
Query: 255 EQVFSELGFP 264
+ F L +P
Sbjct: 661 SRAFRSLAYP 670
>gi|113415686 PREDICTED: hypothetical protein LOC285556 [Homo
sapiens]
Length = 1826
Score = 37.4 bits (85), Expect = 0.023
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 32/190 (16%)
Query: 83 GPTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPV 142
GP+ PPP GPGT L P+ T E +G+ + + + G A +
Sbjct: 505 GPSDSGPTPPPTGPGTAPLTEPLPE------------TPEAASGAAAAAASSCGSAASQI 552
Query: 143 SLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKG--------AAQV 194
L P + + P R+ N+ + G ++ ++ E AA V
Sbjct: 553 LLSIKPASRAINEP----SNVRAKQNIIYAAKHEGDMSLRVSTAAEHNSSSLKQNPAAAV 608
Query: 195 AAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHVALQVHPHCTVAALQ 254
A A+ +A+ +LQ C G IR + ++ ++ A+SA S A + V L
Sbjct: 609 AQDHAKKFIAVPARLQTRC---GAIRAKELVDYSSGASSAVSELDDADK-----EVRNLT 660
Query: 255 EQVFSELGFP 264
+ F L +P
Sbjct: 661 SRAFRSLAYP 670
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 37.4 bits (85), Expect = 0.023
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 93 PGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVSLPSPPEAST 152
PG PG + ++P Q W L G K + L P+ P PP
Sbjct: 4 PGDPGGSAFLKVDPAYLQHWQQLFPHG---GAGPLKGSGAAGLLSAPQPLQPPPPPPPPE 60
Query: 153 LKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKGAAQVAAVLA 199
PPP++ PR P +L+ S + + + AA AA LA
Sbjct: 61 RAEPPPDSLRPR-PASLSSASSTPASSSTSASSASSCAAAAAAAALA 106
>gi|5032105 small optic lobes [Homo sapiens]
Length = 1086
Score = 37.4 bits (85), Expect = 0.023
Identities = 76/302 (25%), Positives = 110/302 (36%), Gaps = 53/302 (17%)
Query: 94 GGPGTLSLHFLNPQE-------AQRWAVLVRGATVEGQ--NGSKSNSP-----PALGPEA 139
GGP LSL + P+ A +V A G G+++N P PA PE
Sbjct: 167 GGPRRLSLPRIPPEALVVPEVVAPAGFHVVPAAPPPGLPGEGAEANPPATSQGPAAEPEP 226
Query: 140 CPVSLPSPPEASTLKGPPPEADLPRSPGNL------TEREELAGSLARAIAGGDEKGAAQ 193
P P P +STL+ P P L + + A G GA++
Sbjct: 227 -PRVPPFSPFSSTLQNNPVPRSRREVPPQLQPPVPEAAQPSPSAGCRGAPQGSGWAGASR 285
Query: 194 VAAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSAHVALQVHPHCTVAAL 253
+A +L+ R+++ L+E G R++ A S+ S + +A + T A+
Sbjct: 286 LAELLSGKRLSV---LEEEATEGGTSRVE-----AGSSTSGSDIIDLAGDTVRY-TPASP 336
Query: 254 QEQVFSELGFPPAVQR--WVIGRCLCVPERSLASYGVRQDGDPAFLYLLSAPREAPATGP 311
F+ R V RC L +G ++ G+P P P G
Sbjct: 337 SSPDFTTWSCAKCTLRNPTVAPRCSACGCSKL--HGFQEHGEP--------PTHCPDCGA 386
Query: 312 SPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQPSWSCPSCTFINAPDRPGCEMC 371
P GR S G Q AA LP W+CP+CT +NA C C
Sbjct: 387 DKPSP------CGR----SCGRVSSAQKAARVLPER-PGQWACPACTLLNALRAKHCAAC 435
Query: 372 ST 373
T
Sbjct: 436 HT 437
Score = 30.4 bits (67), Expect = 2.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 352 WSCPSCTFINAPDRPGCEMCSTQR 375
W+CP CT N P C +C R
Sbjct: 147 WACPRCTLHNTPVASSCSVCGGPR 170
Score = 30.0 bits (66), Expect = 3.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 352 WSCPSCTFINAPDRPGCEMCSTQR 375
WSC CTF+N + C +C R
Sbjct: 7 WSCVRCTFLNPAGQRQCSICEAPR 30
Score = 28.9 bits (63), Expect = 8.2
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 339 PAASSLPSPLQPSWSCPSCTFINAPDRPGCEMCSTQR 375
PA+ S SP +WSC CT N P C C +
Sbjct: 333 PASPS--SPDFTTWSCAKCTLRNPTVAPRCSACGCSK 367
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 37.4 bits (85), Expect = 0.023
Identities = 50/190 (26%), Positives = 65/190 (34%), Gaps = 28/190 (14%)
Query: 12 ASDLGSAAVLLAVHAAVRPLGAGPDAEA-----QLRRLQLSADPERPGRFRLELLGAGPG 66
A G A ++ + +A+ G P A Q R PG L + GA PG
Sbjct: 79 AGSAGPDASVMNLISALESRGPQPGPSASSLLSQFRSPSWQTAMHTPGPTELFISGALPG 138
Query: 67 AVNL---------EWPLESVSYTIRGPTQHELQPPPGGP---GTLSLHFLNPQEAQRWAV 114
+ + P S P+ LQ PP P G LS H + + +
Sbjct: 139 SSTFPSSSALSAYQHPASFGSRPFPVPSSLSLQDPPFSPPANGLLSPHDVLHLKPSQAPT 198
Query: 115 LVRGATVEGQNGSKSNSPPALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREE 174
+ E G P LGP P P PP+ PPP LP T+
Sbjct: 199 VPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPPDP-----PPPPRHLP------TQFNL 247
Query: 175 LAGSLARAIA 184
LA S A A A
Sbjct: 248 LASSSAAAAA 257
Score = 34.7 bits (78), Expect = 0.15
Identities = 60/232 (25%), Positives = 80/232 (34%), Gaps = 48/232 (20%)
Query: 3 PPAGGAAAAASDLGSAAVLLAVHAAVRPLGAGPDAEAQLRRLQLSADPERP-GRFRLELL 61
PP A LG A A A GAG A + P +P G +
Sbjct: 408 PPRSTATPKCQSLGGPAAAYATGKASGAGGAGGQAYS----------PGQPQGLLGPQAY 457
Query: 62 GAGPGAVNLEWPLESVSYTIRGPTQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATV 121
G G G + ++ SY+ GP Q PPP PG + +P + Q V+G
Sbjct: 458 GQGFGGGQAQDLSKAPSYS-GGPPQPPSGPPP--PGLATCQSYSPDQLQGQLYGVQGEPY 514
Query: 122 EG----QNGSKSNSP---------PAL--------------GPEACPVSLPSPPEASTLK 154
G G + SP PAL G EA P + P ++
Sbjct: 515 PGPAAHSQGLPTASPSLSYSTGHSPALSGHGGGWGPSSLGGGGEASPSHIIRPLQSPPAT 574
Query: 155 GPPPEADLPRSPGN-----LTEREELA--GSLARAIAGGDEKGAAQVAAVLA 199
G PP P +PG L LA G+ + A G KG + +LA
Sbjct: 575 GRPPGVGSPGAPGKYLSSVLASAPFLAPPGAGSYAAGAGGYKGKGDGSELLA 626
Score = 33.5 bits (75), Expect = 0.33
Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 15/92 (16%)
Query: 293 DPAFLYLLSAPREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQPSW 352
+P L P PA P PQ P PP PP PQPA S P + P+
Sbjct: 1449 EPPLLEEKPPPTPPPAPTPQPQPP-----------PP----PPPPQPALPSPPPLVAPTP 1493
Query: 353 SCPSCTFINAPDRPGCEMCSTQRPCTWDPLAA 384
S P + P P P PLAA
Sbjct: 1494 SSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAA 1525
Score = 32.3 bits (72), Expect = 0.74
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 303 PREAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQ 349
P +APA P P+ P+K E P +P P P SL P++
Sbjct: 1693 PPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVE 1739
Score = 28.9 bits (63), Expect = 8.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 132 PPALGPEACPVSLPSPPEASTLKGPPPEADLPRSP 166
PPA P+ P P PP+ + PP A P SP
Sbjct: 1462 PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSP 1496
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 37.0 bits (84), Expect = 0.030
Identities = 80/319 (25%), Positives = 119/319 (37%), Gaps = 33/319 (10%)
Query: 44 LQLSADPERPGRFRLELLGAGPGAVNLEWPLESVSYTIRGPTQHELQPPPGGPGTLSLHF 103
L S+D E LE L + P + E+ VS T PT+ E G P T +
Sbjct: 1918 LSSSSDSEEE---ELEELPSVPRPLQPEFSGSRVSLTDI-PTEDEAL---GTPETGAATP 1970
Query: 104 LNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVSLPSPPEASTLKGPPPEADLP 163
++ QE R A + Q + P+ G E P + SP +G E+ LP
Sbjct: 1971 MDWQEQGR-------APSQDQEAPSPEALPSPGQE--PAAGASPRRGELRRGSSAESALP 2021
Query: 164 RS-PGNLTEREELAGSLARAIAGGDEKGAAQVA-AVLAQHRVALSVQ-LQEACFPPGPIR 220
R+ P L A S+ GA ++A L + A +Q L++ GP
Sbjct: 2022 RAGPRELGRGLHKAASVELPQRRSPSPGATRLARGGLGEGEYAQRLQALRQRLLRGGPED 2081
Query: 221 LQVT------LEDAASAA-----SAASSAHVALQVHPHCTVAALQEQV-FSELGFPPAVQ 268
+V+ LE A + A+S+ A P LQ+ FS+ P +
Sbjct: 2082 GKVSGLRGPLLESLGGRARDPRMARAASSEAAPHHQPPLENRGLQKSSSFSQGEAEPRGR 2141
Query: 269 RWVIGRCLCVPERSLASYGVRQDGDPAFLYLLSAPREAPATGPSPQHPQKMDGELGRLFP 328
G L +P L + +++ P+ L A +PA +P+ E P
Sbjct: 2142 HRRAGAPLEIPVARLGARRLQES--PSLSALSEAQPSSPARPSAPKPSTPKSAEPSATTP 2199
Query: 329 PSLGLPPGPQPAASSLPSP 347
PP PQPA P P
Sbjct: 2200 SDAPQPPAPQPAQDKAPEP 2218
>gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo
sapiens]
Length = 330
Score = 36.2 bits (82), Expect = 0.051
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Query: 117 RGATVEGQNGSKSNSPP-ALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREEL 175
RGA G GS PP L E P + P P S + P A++ R+P + L
Sbjct: 78 RGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRS---GRFL 134
Query: 176 AGSLARAIAGGDEKGAAQVAAVLAQHRVALSVQLQEAC-FPPGPIRLQVT 224
+ + G +G +V+A A+ + FPPGP R ++T
Sbjct: 135 GCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFPPGPARTEIT 184
>gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo
sapiens]
Length = 330
Score = 36.2 bits (82), Expect = 0.051
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Query: 117 RGATVEGQNGSKSNSPP-ALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREEL 175
RGA G GS PP L E P + P P S + P A++ R+P + L
Sbjct: 78 RGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRS---GRFL 134
Query: 176 AGSLARAIAGGDEKGAAQVAAVLAQHRVALSVQLQEAC-FPPGPIRLQVT 224
+ + G +G +V+A A+ + FPPGP R ++T
Sbjct: 135 GCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFPPGPARTEIT 184
>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
sapiens]
Length = 254
Score = 36.2 bits (82), Expect = 0.051
Identities = 49/180 (27%), Positives = 59/180 (32%), Gaps = 22/180 (12%)
Query: 23 AVHAAVRPLGAGPDAEAQLRRLQLSADPERPGRFRLELLGAGPGAVNLEWPLESVSYTIR 82
A AAVRP AGP A A +A P L P AV +
Sbjct: 19 AAPAAVRPPAAGPPAAAPAVVYPAAAGPSAASLCAANPLVPAPAAVR---------PPVA 69
Query: 83 GP---TQHELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEA 139
GP + P GP SL NP AV AT+ + SP A+ P A
Sbjct: 70 GPPATAPAVVCPAAAGPSAASLRAANPLAVAPAAVRRPAATL------GAASPAAVAPAA 123
Query: 140 CPVSLPSPPEASTLKGPP----PEADLPRSPGNLTEREELAGSLARAIAGGDEKGAAQVA 195
+ SP AS P P A P + L A A + E A +A
Sbjct: 124 VCPAAASPSAASLCAASPTAAAPAAASPAAAAPLAVNPAAAAPAAACVQSVAESPATPLA 183
Score = 29.3 bits (64), Expect = 6.3
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 3 PPAGGAAAAASDLGSAAVLLAVHAAVRPLGAGPDAEAQLRRLQLSADPERPGRFRLELLG 62
P A G +AA+ L +A L+ AAVRP AGP A A +A P L
Sbjct: 41 PAAAGPSAAS--LCAANPLVPAPAAVRPPVAGPPATAPAVVCPAAAGPSAASLRAANPLA 98
Query: 63 AGPGAV 68
P AV
Sbjct: 99 VAPAAV 104
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 36.2 bits (82), Expect = 0.051
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 305 EAPATGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQPSWSCPSCTFINAPD 364
++ T P PQ G+ + PP LPP P SLP PS S S + +AP
Sbjct: 444 DSSKTPPQRPPPQGGPGQPQGMQPPGKVLPPRRLPPGPSLP----PSSSSSSSSSSSAPQ 499
Query: 365 RPGCEMCSTQRPCTWDPLAAA 385
RPG P + LA A
Sbjct: 500 RPGGPTTHGDAPSSSSSLAEA 520
>gi|4503969 growth differentiation factor 5 preproprotein [Homo
sapiens]
Length = 501
Score = 35.8 bits (81), Expect = 0.067
Identities = 58/181 (32%), Positives = 70/181 (38%), Gaps = 28/181 (15%)
Query: 20 VLLAVHAAVRPLGAGPD---AEAQLRRLQLSADPERPGRFRLELLGAGPGAVNLEWPLES 76
VL A RP G P AEA+ R L+ + RPG G GA N +
Sbjct: 25 VLGAPDLGQRPQGTRPGLAKAEAK-ERPPLARNVFRPGGHSY-----GGGATNANARAKG 78
Query: 77 VSYTIRGPTQ------HELQPPPGGPGTLSLHFLNPQEAQRWAVLVRGATVEGQ-NGSKS 129
+ G TQ +L P PGGP H PQ Q A R T +GQ G K
Sbjct: 79 GTGQTGGLTQPKKDEPKKLPPRPGGPEPKPGH--PPQTRQATA---RTVTPKGQLPGGK- 132
Query: 130 NSPPALGPEACPVSLPSPPEASTLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEK 189
+PP G L E GPP E P P +T E + SL R ++ D K
Sbjct: 133 -APPKAGSVPSSFLLKKARE----PGPPREPKEPFRPPPITPHEYML-SLYRTLSDADRK 186
Query: 190 G 190
G
Sbjct: 187 G 187
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,887,961
Number of Sequences: 37866
Number of extensions: 1289756
Number of successful extensions: 8816
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 392
Number of HSP's that attempted gapping in prelim test: 7528
Number of HSP's gapped (non-prelim): 1669
length of query: 387
length of database: 18,247,518
effective HSP length: 104
effective length of query: 283
effective length of database: 14,309,454
effective search space: 4049575482
effective search space used: 4049575482
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.