LOC652460 9276

Name: LOC652460	Sequence: fasta or formatted (1369aa)		NCBI GI: 169218211
Description: PREDICTED: similar to plectin 1, partial		Referenced in: Ribosomes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 120 3 C cysteine 1.2 17 3 D aspartate 4.8 66 2 E glutamate 9.7 133 4 F phenylalanine 2.0 28 2 G glycine 4.5 62 2 H histidine 3.1 42 2 I isoleucine 2.8 39 2 K lysine 5.0 68 2 L leucine 13.1 179 4 M methionine 1.8 25 1 N asparagine 2.0 27 1 P proline 4.7 64 3 Q glutamine 7.9 108 2 R arginine 9.4 129 3 S serine 5.4 74 3 T threonine 3.6 49 2 V valine 6.4 87 2 W tryptophan 1.7 23 1 Y tyrosine 2.1 29 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to plectin 1, partial PLEC1 0.994 plectin 1 isoform 6 PLEC1 0.868 plectin 1 isoform 1 PLEC1 0.868 plectin 1 isoform 11 PLEC1 0.868 plectin 1 isoform 10 PLEC1 0.868 plectin 1 isoform 8 PLEC1 0.868 plectin 1 isoform 7 PLEC1 0.868 plectin 1 isoform 3 PLEC1 0.868 plectin 1 isoform 2 MACF1 0.415 microfilament and actin filament cross-linker protei... DST 0.238 dystonin isoform 4 DST 0.238 dystonin isoform 3 DST 0.238 dystonin isoform 2 DST 0.238 dystonin isoform 1 DST 0.238 dystonin isoform 1eB precursor DST 0.238 dystonin isoform 1eA precursor DST 0.238 dystonin isoform 1e precursor DSP 0.161 desmoplakin isoform II DSP 0.161 desmoplakin isoform I SPTBN2 0.121 spectrin, beta, non-erythrocytic 2 SPTBN1 0.116 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.116 spectrin, beta, non-erythrocytic 1 isoform 1 SPTB 0.116 spectrin beta isoform a SPTB 0.116 spectrin beta isoform b SPTBN4 0.102 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SPTBN5 0.085 spectrin, beta, non-erythrocytic 5 ACTN4 0.082 actinin, alpha 4 ACTN3 0.082 actinin, alpha 3 PPL 0.081 periplakin ACTN1 0.079 actinin, alpha 1 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.