SYNE2 26245

Name: SYNE2	Sequence: fasta or formatted (556aa)		NCBI GI: 33624873
Description: spectrin repeat containing, nuclear envelope 2 isoform 4		Referenced in: Spectrin and Plectin Families
Other entries for this name: alt prot [6885aa] spectrin repeat containing, nuclear envelope 2 isoform 1 alt prot [6907aa] spectrin repeat containing, nuclear envelope 2 isoform 5 alt prot [429aa] spectrin repeat containing, nuclear envelope 2 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 33 2 C cysteine 1.4 8 1 D aspartate 5.0 28 1 E glutamate 9.5 53 3 F phenylalanine 2.0 11 2 G glycine 5.6 31 2 H histidine 2.3 13 2 I isoleucine 2.9 16 1 K lysine 5.8 32 2 L leucine 11.5 64 9 M methionine 2.0 11 1 N asparagine 2.7 15 2 P proline 8.1 45 3 Q glutamine 6.8 38 2 R arginine 5.8 32 2 S serine 9.7 54 3 T threonine 4.7 26 2 V valine 5.0 28 2 W tryptophan 1.4 8 1 Y tyrosine 1.8 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spectrin repeat containing, nuclear envelope 2 isofo... SYNE2 0.960 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.913 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.750 spectrin repeat containing, nuclear envelope 2 isofo... SYNE1 0.308 spectrin repeat containing, nuclear envelope 1 isof... SYNE1 0.308 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.285 spectrin repeat containing, nuclear envelope 1 isof... SYNE1 0.285 spectrin repeat containing, nuclear envelope 1 isof... C14orf49 0.047 nesprin-3 MACF1 0.026 microfilament and actin filament cross-linker protei... MACF1 0.026 microfilament and actin filament cross-linker protei... SPTBN2 0.023 spectrin, beta, non-erythrocytic 2 DST 0.022 dystonin isoform 4 DST 0.022 dystonin isoform 3 DST 0.022 dystonin isoform 2 DST 0.022 dystonin isoform 1 DST 0.022 dystonin isoform 1eA precursor SPTAN1 0.021 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.021 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTB 0.019 spectrin beta isoform a SPTB 0.019 spectrin beta isoform b CCDC88C 0.019 DVL-binding protein DAPLE LOC283767 0.018 golgi autoantigen, golgin subfamily a-like SPTBN1 0.017 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.017 spectrin, beta, non-erythrocytic 1 isoform 1 LOC727832 0.016 golgi autoantigen, golgin subfamily a-like LOC283685 0.016 PREDICTED: golgi autoantigen, golgin subfamily a-li... IKIP 0.016 IKK interacting protein isoform 1 LOC440243 0.016 PREDICTED: Putative golgin subfamily A member 6-lik... GOLGB1 0.015 golgi autoantigen, golgin subfamily b, macrogolgin ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.