CLMN 11684

Name: CLMN	Sequence: fasta or formatted (1002aa)		NCBI GI: 19923599
Description: calmin		Referenced in: Spectrin and Plectin Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 59 2 C cysteine 0.8 8 1 D aspartate 7.0 70 3 E glutamate 10.6 106 3 F phenylalanine 3.7 37 2 G glycine 4.2 42 2 H histidine 3.3 33 1 I isoleucine 4.3 43 2 K lysine 6.3 63 3 L leucine 8.9 89 3 M methionine 1.6 16 2 N asparagine 3.7 37 3 P proline 6.5 65 3 Q glutamine 4.0 40 2 R arginine 4.2 42 2 S serine 13.1 131 6 T threonine 3.7 37 2 V valine 6.0 60 1 W tryptophan 0.7 7 1 Y tyrosine 1.7 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calmin SYNE1 0.122 spectrin repeat containing, nuclear envelope 1 isof... SYNE1 0.119 spectrin repeat containing, nuclear envelope 1 isofo... SYNE2 0.101 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.101 spectrin repeat containing, nuclear envelope 2 isof... SPTBN1 0.079 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.078 spectrin, beta, non-erythrocytic 1 isoform 1 SPTBN2 0.077 spectrin, beta, non-erythrocytic 2 SPTBN4 0.077 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SPTB 0.076 spectrin beta isoform a SPTB 0.076 spectrin beta isoform b PLEC1 0.074 plectin 1 isoform 3 PLEC1 0.074 plectin 1 isoform 8 PLEC1 0.073 plectin 1 isoform 2 PLEC1 0.073 plectin 1 isoform 11 PLEC1 0.073 plectin 1 isoform 10 PLEC1 0.073 plectin 1 isoform 7 PLEC1 0.073 plectin 1 isoform 6 PLEC1 0.073 plectin 1 isoform 1 MACF1 0.072 microfilament and actin filament cross-linker protei... DST 0.072 dystonin isoform 1 UTRN 0.071 utrophin LOC652460 0.071 PREDICTED: similar to plectin 1, partial DST 0.071 dystonin isoform 4 DST 0.071 dystonin isoform 3 DST 0.071 dystonin isoform 2 DMD 0.070 dystrophin Dp427c isoform DMD 0.069 dystrophin Dp427p1 isoform DMD 0.069 dystrophin Dp427m isoform ACTN4 0.064 actinin, alpha 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.