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Search of human proteins with 239754329
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754329 PREDICTED: hypothetical protein XP_002345954 [Homo
sapiens]
(156 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754329 PREDICTED: hypothetical protein XP_002345954 [Homo ... 331 1e-91
gi|239748853 PREDICTED: hypothetical protein XP_002346819 [Homo ... 331 1e-91
gi|239742882 PREDICTED: hypothetical protein XP_002342638 [Homo ... 331 1e-91
gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens] 41 5e-04
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens] 39 0.002
gi|50301232 synaptopodin 2-like isoform b [Homo sapiens] 39 0.002
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 39 0.002
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 39 0.002
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 39 0.002
gi|145309304 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... 37 0.005
gi|169210099 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 37 0.007
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 36 0.012
gi|115511036 alpha-kinase 3 [Homo sapiens] 36 0.012
gi|116235474 LKB1 interacting protein [Homo sapiens] 36 0.012
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens] 36 0.015
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens] 36 0.015
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ... 36 0.015
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 35 0.020
gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo ... 35 0.034
gi|169209664 PREDICTED: hypothetical protein FLJ39639 [Homo sapi... 35 0.034
gi|169167057 PREDICTED: hypothetical protein [Homo sapiens] 35 0.034
gi|113426298 PREDICTED: hypothetical protein FLJ39639 [Homo sapi... 35 0.034
gi|113425870 PREDICTED: hypothetical protein LOC283876 [Homo sap... 35 0.034
gi|188536004 zinc finger protein 469 [Homo sapiens] 35 0.034
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 35 0.034
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 35 0.034
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 34 0.044
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 34 0.044
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 34 0.044
>gi|239754329 PREDICTED: hypothetical protein XP_002345954 [Homo
sapiens]
Length = 156
Score = 331 bits (849), Expect = 1e-91
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MKARKSCAITAARSHLSFPRTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVAT 60
MKARKSCAITAARSHLSFPRTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVAT
Sbjct: 1 MKARKSCAITAARSHLSFPRTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVAT 60
Query: 61 TSREERIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQP 120
TSREERIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQP
Sbjct: 61 TSREERIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQP 120
Query: 121 SFGPRPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA 156
SFGPRPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA
Sbjct: 121 SFGPRPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA 156
>gi|239748853 PREDICTED: hypothetical protein XP_002346819 [Homo
sapiens]
Length = 156
Score = 331 bits (849), Expect = 1e-91
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MKARKSCAITAARSHLSFPRTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVAT 60
MKARKSCAITAARSHLSFPRTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVAT
Sbjct: 1 MKARKSCAITAARSHLSFPRTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVAT 60
Query: 61 TSREERIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQP 120
TSREERIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQP
Sbjct: 61 TSREERIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQP 120
Query: 121 SFGPRPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA 156
SFGPRPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA
Sbjct: 121 SFGPRPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA 156
>gi|239742882 PREDICTED: hypothetical protein XP_002342638 [Homo
sapiens]
Length = 156
Score = 331 bits (849), Expect = 1e-91
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MKARKSCAITAARSHLSFPRTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVAT 60
MKARKSCAITAARSHLSFPRTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVAT
Sbjct: 1 MKARKSCAITAARSHLSFPRTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVAT 60
Query: 61 TSREERIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQP 120
TSREERIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQP
Sbjct: 61 TSREERIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQP 120
Query: 121 SFGPRPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA 156
SFGPRPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA
Sbjct: 121 SFGPRPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA 156
>gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens]
Length = 434
Score = 40.8 bits (94), Expect = 5e-04
Identities = 34/95 (35%), Positives = 36/95 (37%), Gaps = 8/95 (8%)
Query: 67 IAPLPPGRHPNRASLHPCSGEVF--TKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGP 124
+AP+PPG P L SG T S P AG G R G CS P
Sbjct: 305 VAPVPPGAAPANGRLSSSSGSASDRTSSNPFSGRSAGSHPGTRSVSASSGPCSPA---AP 361
Query: 125 RPDSPTPCTPSARP-GGSSGAAH--PRPQPPPHAA 156
P P P P G S AH PRP P AA
Sbjct: 362 HPPPPPRFQPHQGPWGAPSPQAHLSPRPHDGPPAA 396
>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
Length = 977
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 67 IAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQ--PSFGP 124
+AP PP R ++ + PR + R G+ KR R R P GP
Sbjct: 725 VAPKPPSRGLLDGLVNGAASSAGIPEPPRLQGRGGELFAKRQSRADRYVVEGTPGPGLGP 784
Query: 125 RPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA 156
RP SP+P TPS P S P + PP A
Sbjct: 785 RPRSPSP-TPSLPP---SWKYSPNIRAPPPIA 812
>gi|50301232 synaptopodin 2-like isoform b [Homo sapiens]
Length = 753
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 67 IAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQ--PSFGP 124
+AP PP R ++ + PR + R G+ KR R R P GP
Sbjct: 501 VAPKPPSRGLLDGLVNGAASSAGIPEPPRLQGRGGELFAKRQSRADRYVVEGTPGPGLGP 560
Query: 125 RPDSPTPCTPSARPGGSSGAAHPRPQPPPHAA 156
RP SP+P TPS P S P + PP A
Sbjct: 561 RPRSPSP-TPSLPP---SWKYSPNIRAPPPIA 588
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 38.5 bits (88), Expect = 0.002
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 94 PRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRP---DSPTPCTPSARPG---GSSGAAHP 147
P R G RGR RG AQP+ P P SP P P R G GS+ P
Sbjct: 217 PARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRP 276
Query: 148 RPQPPPHA 155
RP+ P A
Sbjct: 277 RPREPQAA 284
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 38.5 bits (88), Expect = 0.002
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 94 PRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRP---DSPTPCTPSARPG---GSSGAAHP 147
P R G RGR RG AQP+ P P SP P P R G GS+ P
Sbjct: 217 PARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRP 276
Query: 148 RPQPPPHA 155
RP+ P A
Sbjct: 277 RPREPQAA 284
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 38.5 bits (88), Expect = 0.002
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 94 PRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRP---DSPTPCTPSARPG---GSSGAAHP 147
P R G RGR RG AQP+ P P SP P P R G GS+ P
Sbjct: 217 PARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRP 276
Query: 148 RPQPPPHA 155
RP+ P A
Sbjct: 277 RPREPQAA 284
>gi|145309304 cadherin EGF LAG seven-pass G-type receptor 3 [Homo
sapiens]
Length = 3312
Score = 37.4 bits (85), Expect = 0.005
Identities = 46/142 (32%), Positives = 52/142 (36%), Gaps = 25/142 (17%)
Query: 32 TSPEHRLGSQALCPAASGACLWGVGVVATTSREERIAP---LPPGRH---------PNRA 79
T R+G+ C G G ATTS ER AP PG P A
Sbjct: 193 TGSRKRVGTARCCGELWATGSKGQGERATTSGAERTAPRRNCLPGASGSGPELDSAPRTA 252
Query: 80 SLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSF-GPRPDSPTPCTPSARP 138
P SG SAPR A + KR R R C P GPRP P P AR
Sbjct: 253 RTAPASG-----SAPRESRTAPEPAPKRMRSRGLFRCRFLPQRPGPRPPG-LPARPEARK 306
Query: 139 GGSSG------AAHPRPQPPPH 154
S+ AA+ PQ P +
Sbjct: 307 VTSANRARFRRAANRHPQFPQY 328
>gi|169210099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 413
Score = 37.0 bits (84), Expect = 0.007
Identities = 45/143 (31%), Positives = 51/143 (35%), Gaps = 31/143 (21%)
Query: 40 SQALCPAASGACLWGVGVVATTSREERIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSR 99
S A PA +G G R A L P R LH CS +T +A +S
Sbjct: 6 SPAAAPAHTGGRRGGGAPAPQCVRSP--AALSRRHQPGRLLLHVCSPVPWTGTATEGQSV 63
Query: 100 A----GQEVGKRGRRRQRG---WC----SAQPSFGPRPD-------------SPTPCTPS 135
GQ R R RG W S PS GP P SP P T +
Sbjct: 64 GTCLPGQFTRPLDRHRHRGSECWHLSSGSVHPSPGPAPAQRVRVLAPVFRICSPLPRTGT 123
Query: 136 ARPGG-----SSGAAHPRPQPPP 153
A G SSG+ HP P P P
Sbjct: 124 ATEGQECWHLSSGSVHPSPGPAP 146
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 37.0 bits (84), Expect = 0.007
Identities = 39/150 (26%), Positives = 51/150 (34%), Gaps = 49/150 (32%)
Query: 20 RTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVATTSREERIAPLPPGRHPNRA 79
R ++H PP + +SP R+ +A A P PP R
Sbjct: 327 RPGSAHSPPDKPSSPSPRVRDKAAAAA----------------------PTPPARGKESP 364
Query: 80 SLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQ--------RGWCSAQPSFGPRPDSPTP 131
S +SAP + R G+ G GRRR+ R SA G R P P
Sbjct: 365 S---------PRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAP 415
Query: 132 CTPSAR----------PGGSSGAAHPRPQP 151
S+R G GA P P+P
Sbjct: 416 PRGSSRSLSRARSSSDSGSGRGAPGPGPEP 445
Score = 28.9 bits (63), Expect = 1.8
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 74 RHPNRASLHPCSGEVFTKS-APRRRSRAGQEVGKR-GRRRQRGWCSAQPSFGPRPDSPT- 130
RH + +S P ++ S +P R S ++ G++ G +R G S PS G SP
Sbjct: 254 RHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQR 313
Query: 131 ---PCTPSARPGGSSGAAHPRPQPP 152
S GG G+AH P P
Sbjct: 314 NGGSGQRSGAHGGRPGSAHSPPDKP 338
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 36.2 bits (82), Expect = 0.012
Identities = 43/138 (31%), Positives = 52/138 (37%), Gaps = 15/138 (10%)
Query: 3 ARKSCAITAARSHLSFPRTSTSHLPPRQVTS--PEHRLGSQALC-PAASGACLWGVGVVA 59
A+ SCA H PR LPP + P S A C PAA+ C + A
Sbjct: 23 AKPSCAGLLPHLHYFAPRRR-GFLPPPAASGFCPPRLFASAAFCAPAAAAFCPPPPRLFA 81
Query: 60 TTSR---EERIAPLPPGRH---PNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQR 113
R R A LP P R HP FT +APR +R G R+R
Sbjct: 82 ARRRGFLPRRRAFLPAAAFYPPPPRLFAHPRCRGFFTPAAPRLFARGGFL-----HPRRR 136
Query: 114 GWCSAQPSFGPRPDSPTP 131
G+ +QP G D P
Sbjct: 137 GFLPSQPQSGHSTDVRAP 154
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 36.2 bits (82), Expect = 0.012
Identities = 33/122 (27%), Positives = 44/122 (36%), Gaps = 9/122 (7%)
Query: 19 PRTSTSHLPPRQVTSPEHRLGSQALCPAASGACLWGVGVVATTSREERIAPLPPGRHPNR 78
P + T LPP P L + G+C S E A + R+ +
Sbjct: 936 PPSRTPKLPP--TAGPRAPLNIECFVQTPEGSCFPKKPGCLPRSEE---AVVTASRNHEQ 990
Query: 79 ASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDSPTPCTPSARP 138
L P SG + + P Q G+R R Q S+ P + DSP C RP
Sbjct: 991 TVLGPLSGNLMLPAQPPHEGSVEQVGGERCRGPQ----SSGPVEAKQEDSPFQCPKEERP 1046
Query: 139 GG 140
GG
Sbjct: 1047 GG 1048
>gi|116235474 LKB1 interacting protein [Homo sapiens]
Length = 1099
Score = 36.2 bits (82), Expect = 0.012
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 71 PPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDSPT 130
P P +L+P F + P + + GR + +PS P P +PT
Sbjct: 402 PSDTDPEPRTLNPSPAGWFVQQHPELELMSSFRE-RFGRNWLQYRSHLEPSGNPLPATPT 460
Query: 131 PCTPSARPGGSSGA-AHPRPQPPPHAA 156
PSA P S G PRP PP A
Sbjct: 461 TSAPSAPPASSQGPDTAPRPSPPQEEA 487
>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 35.8 bits (81), Expect = 0.015
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 69 PLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDS 128
P PP R + P S + ++S R RSR+ R R R W + RP S
Sbjct: 18 PPPPPRASSLPRSLPRSPRLCSRSRSRSRSRS------RRRSRSLRWLRRRSRSRSRPFS 71
Query: 129 PTPCTPS--ARPGG-SSGAAHPRPQ------PPPHAA 156
P PS + PGG SSG A P + PPP ++
Sbjct: 72 SGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSS 108
>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 35.8 bits (81), Expect = 0.015
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 69 PLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDS 128
P PP R + P S + ++S R RSR+ R R R W + RP S
Sbjct: 18 PPPPPRASSLPRSLPRSPRLCSRSRSRSRSRS------RRRSRSLRWLRRRSRSRSRPFS 71
Query: 129 PTPCTPS--ARPGG-SSGAAHPRPQ------PPPHAA 156
P PS + PGG SSG A P + PPP ++
Sbjct: 72 SGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSS 108
>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
sapiens]
Length = 231
Score = 35.8 bits (81), Expect = 0.015
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 69 PLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDS 128
P PP R + P S + ++S R RSR+ R R R W + RP S
Sbjct: 18 PPPPPRASSLPRSLPRSPRLCSRSRSRSRSRS------RRRSRSLRWLRRRSRSRSRPFS 71
Query: 129 PTPCTPS--ARPGG-SSGAAHPRPQ------PPPHAA 156
P PS + PGG SSG A P + PPP ++
Sbjct: 72 SGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSS 108
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 35.4 bits (80), Expect = 0.020
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 28 PRQVTSPEHRLGSQA---LCPAASGACLWGVGVVATTSREERIAPLPPGRHPNRASLHPC 84
PR V S R G + +CP W + ++ PLPP + P + L P
Sbjct: 1163 PRGVPSRRGRGGGRPPPQVCPG------WSPPAKSLAPKKPPTGPLPPSKEPLKEKLIPG 1216
Query: 85 SGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQ 119
+ S G E G+R RRR+ G Q
Sbjct: 1217 PLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQ 1251
Score = 32.0 bits (71), Expect = 0.22
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 66 RIAPLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPR 125
+I PP + P + +G A R+ +R G G +G R + +GPR
Sbjct: 875 KIQTPPPKKEPPKEETAQLTGP----EAGRKPAR-GVGSGGQGPPPPRRESRTETRWGPR 929
Query: 126 PDSPTPCTPSARPGGSSGAAHPRPQPPP 153
P S P PG A P +PPP
Sbjct: 930 PGSSRRGIPPEEPGAPPRRAGPIKKPPP 957
Score = 29.6 bits (65), Expect = 1.1
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Query: 60 TTSREERIAPLPPGRHPNRASLHPCSG---EVFTKSAPRRRSRAGQEVGKRGRRRQRGWC 116
TT ++ P G P R P G + KS P R R QE + +++Q W
Sbjct: 609 TTPPVPKVEPKGDGIGPTRQP--PSQGLGYPKYQKSLPPRFQRQQQEQLLK-QQQQHQWQ 665
Query: 117 SAQPSFGPRPDSPTPCTPSARPGGSSGA--AHPRPQPPPHA 155
Q P PTP PS + GA A P PPP A
Sbjct: 666 QHQQGSAP----PTPVPPSPPQPVTLGAVPAPQAPPPPPKA 702
>gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo
sapiens]
Length = 176
Score = 34.7 bits (78), Expect = 0.034
Identities = 29/84 (34%), Positives = 32/84 (38%), Gaps = 10/84 (11%)
Query: 69 PLPPGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDS 128
P P GR P RA P T+ P RR R G RR A P RP
Sbjct: 57 PGPLGRPPTRAG--PAQRSSCTQ--PHRRRRRGT------RRLPPALTPAGPYHSARPGG 106
Query: 129 PTPCTPSARPGGSSGAAHPRPQPP 152
PC SAR A P+P+ P
Sbjct: 107 GGPCQGSARFSPDPAAVRPQPRGP 130
>gi|169209664 PREDICTED: hypothetical protein FLJ39639 [Homo
sapiens]
Length = 284
Score = 34.7 bits (78), Expect = 0.034
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 74 RHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDSPTPCT 133
R N A + ++ +++P+ R+ G V +R G AQPS P P PTP
Sbjct: 75 RGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPS-PPGPLPPTPHG 133
Query: 134 PSAR--PGGSSGAAHPRPQPPP 153
P AR G S G+ +P P P
Sbjct: 134 PHARAETGASPGSPVRQPLPGP 155
>gi|169167057 PREDICTED: hypothetical protein [Homo sapiens]
Length = 320
Score = 34.7 bits (78), Expect = 0.034
Identities = 41/150 (27%), Positives = 50/150 (33%), Gaps = 44/150 (29%)
Query: 15 HLSFPRTSTSHLPPRQ--VTSPEHRLGSQALCPAASGACLWGVGVVATTSREERIAPLPP 72
H+ P S LP R+ SP+H WG ++ RE+R + P
Sbjct: 116 HVRSPCPIRSPLPAREDPPLSPQH----------------WGGEILKFPPREKRASSAEP 159
Query: 73 G----RHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDS 128
G R R HPC P RRS + RR PRP +
Sbjct: 160 GHWEKRQDKRLETHPCRAPPLP---PARRSPLPRAACAHPRR-------------PRPLA 203
Query: 129 PTPCTPSAR------PGGSSGAAHPRPQPP 152
T AR P GS G A P P P
Sbjct: 204 GTTFCGGARVLSNPPPSGSGGDARPSPLVP 233
>gi|113426298 PREDICTED: hypothetical protein FLJ39639 [Homo
sapiens]
Length = 284
Score = 34.7 bits (78), Expect = 0.034
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 74 RHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDSPTPCT 133
R N A + ++ +++P+ R+ G V +R G AQPS P P PTP
Sbjct: 75 RGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPS-PPGPLPPTPHG 133
Query: 134 PSAR--PGGSSGAAHPRPQPPP 153
P AR G S G+ +P P P
Sbjct: 134 PHARAETGASPGSPVRQPLPGP 155
>gi|113425870 PREDICTED: hypothetical protein LOC283876 [Homo
sapiens]
Length = 284
Score = 34.7 bits (78), Expect = 0.034
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 74 RHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDSPTPCT 133
R N A + ++ +++P+ R+ G V +R G AQPS P P PTP
Sbjct: 75 RGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPS-PPGPLPPTPHG 133
Query: 134 PSAR--PGGSSGAAHPRPQPPP 153
P AR G S G+ +P P P
Sbjct: 134 PHARAETGASPGSPVRQPLPGP 155
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 34.7 bits (78), Expect = 0.034
Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 57 VVATTSREERIAPLPPGRHPNRASLHPCSGEVFTKSA---PRRRSRAGQEVGKRGRRRQR 113
V A R P P HP A+L PC+ E A PR + Q V K G +
Sbjct: 1619 VEAVQGRPGGTWPCPASFHPGHAALLPCAQEDLVSGAPFSPRGANFHFQPVQKAGASK-T 1677
Query: 114 GWCSAQPSFGPRPDSPTPCTPSARPG 139
G C A+ P D P PS +PG
Sbjct: 1678 GLCQAEGDSRPPQDVCLP-EPSKQPG 1702
Score = 28.1 bits (61), Expect = 3.2
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 121 SFGPRPDSPTPCTPSARPGGS-SGAAHPRPQPPPHAA 156
+FG P P P +RPGGS G + P P H A
Sbjct: 247 NFGVPPAEPEPIPKGSRPGGSPRGVSFQFPFPALHGA 283
Score = 26.6 bits (57), Expect = 9.2
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Query: 131 PCTPSARPGGSS-GAAHPRP 149
P TP A+PG SS G+ PRP
Sbjct: 3693 PATPKAKPGPSSQGSGSPRP 3712
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 34.7 bits (78), Expect = 0.034
Identities = 29/101 (28%), Positives = 37/101 (36%), Gaps = 17/101 (16%)
Query: 69 PLPPGRHPNRASLHPCS-GEVFTKSAPRRRSRAGQEVGKRGRRRQRGW------CSAQPS 121
PLPP R P++ S+ S G ++ P + G + R G CS+ P
Sbjct: 607 PLPPARSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQERNLPEGTERPPKLCSSLPG 666
Query: 122 FGP----------RPDSPTPCTPSARPGGSSGAAHPRPQPP 152
GP P SP P P P S A P PP
Sbjct: 667 QGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPP 707
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 34.7 bits (78), Expect = 0.034
Identities = 29/101 (28%), Positives = 37/101 (36%), Gaps = 17/101 (16%)
Query: 69 PLPPGRHPNRASLHPCS-GEVFTKSAPRRRSRAGQEVGKRGRRRQRGW------CSAQPS 121
PLPP R P++ S+ S G ++ P + G + R G CS+ P
Sbjct: 689 PLPPARSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQERNLPEGTERPPKLCSSLPG 748
Query: 122 FGP----------RPDSPTPCTPSARPGGSSGAAHPRPQPP 152
GP P SP P P P S A P PP
Sbjct: 749 QGPPPYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPP 789
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 34.3 bits (77), Expect = 0.044
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 17/118 (14%)
Query: 49 GACLWGVGVVATTSREERIAPLPPGRHPNRASLHPCSGEVFTKSA--PRRRSRAGQEVGK 106
G CL G +V + I P P HP P + + +A PRRRS G + G
Sbjct: 32 GFCLPGPALVVAGL--DGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRS-PGPQGGG 88
Query: 107 RG----------RRRQRGWCSAQPSFGPRPDSPT--PCTPSARPGGSSGAAHPRPQPP 152
G + R A PS GP P P+ P +P + P ++ ++ P P PP
Sbjct: 89 GGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPSPPSPPVPTAQSSLPAPWPP 146
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 34.3 bits (77), Expect = 0.044
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 10/94 (10%)
Query: 72 PGRHPNRASLHPCSGEVFTKSAPRRRSRAGQEVGKRGRRRQRGWCSAQPSFGPRPDS--- 128
PG P + P + P RR R + +R R +G + P+ GPRP
Sbjct: 146 PGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGPT-GPRPTGAPP 204
Query: 129 ------PTPCTPSARPGGSSGAAHPRPQPPPHAA 156
P P P P SG RP PP A
Sbjct: 205 SRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGA 238
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 34.3 bits (77), Expect = 0.044
Identities = 35/93 (37%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Query: 67 IAPLPPGRHPNRASLHPCSGEVFTKSAPRRR-SRAGQEVGKRGRRRQRGWCSAQPSFGPR 125
++P P GR RAS CSG SA R R S A +RG + A +F P
Sbjct: 96 VSPGPLGR---RAS---CSGRA--GSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPG 147
Query: 126 PDSPTPCTPSARPG----GSSGAAHPRPQPPPH 154
P SP +P RPG G SGA R P H
Sbjct: 148 PASPPRASPGGRPGSEARGRSGAECARRVPLHH 180
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,847,808
Number of Sequences: 37866
Number of extensions: 536547
Number of successful extensions: 5719
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 455
Number of HSP's that attempted gapping in prelim test: 4734
Number of HSP's gapped (non-prelim): 1389
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.