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Search of human proteins with 239753856
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753856 PREDICTED: hypothetical protein [Homo sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753856 PREDICTED: hypothetical protein [Homo sapiens] 429 e-120
gi|239748415 PREDICTED: hypothetical protein [Homo sapiens] 426 e-120
gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo ... 426 e-120
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 55 4e-08
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 55 4e-08
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 52 4e-07
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 50 1e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 1e-06
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 49 4e-06
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 49 4e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 49 4e-06
gi|117938768 GNAS complex locus alex [Homo sapiens] 48 5e-06
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 48 7e-06
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 48 7e-06
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 48 7e-06
gi|55741677 SET domain containing 1A [Homo sapiens] 48 7e-06
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 9e-06
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 47 9e-06
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 47 2e-05
gi|150170670 piccolo isoform 2 [Homo sapiens] 46 2e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 46 2e-05
gi|40353727 synaptopodin isoform A [Homo sapiens] 45 3e-05
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 45 4e-05
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 45 4e-05
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 45 6e-05
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 45 6e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 45 6e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 45 6e-05
gi|18959210 WIRE protein [Homo sapiens] 45 6e-05
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 45 6e-05
>gi|239753856 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 429 bits (1102), Expect = e-120
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MDELEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRL 60
MDELEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRL
Sbjct: 1 MDELEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRL 60
Query: 61 RQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRR 120
RQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRR
Sbjct: 61 RQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRR 120
Query: 121 QLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLL 180
QLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLL
Sbjct: 121 QLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLL 180
Query: 181 LRRPQLPPHSETFLPVLDSGTALTGRPL 208
LRRPQLPPHSETFLPVLDSGTALTGRPL
Sbjct: 181 LRRPQLPPHSETFLPVLDSGTALTGRPL 208
>gi|239748415 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 426 bits (1094), Expect = e-120
Identities = 207/208 (99%), Positives = 207/208 (99%)
Query: 1 MDELEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRL 60
MDELEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRL
Sbjct: 1 MDELEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRL 60
Query: 61 RQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRR 120
RQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRR
Sbjct: 61 RQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRR 120
Query: 121 QLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLL 180
QL KGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLL
Sbjct: 121 QLAKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLL 180
Query: 181 LRRPQLPPHSETFLPVLDSGTALTGRPL 208
LRRPQLPPHSETFLPVLDSGTALTGRPL
Sbjct: 181 LRRPQLPPHSETFLPVLDSGTALTGRPL 208
>gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo
sapiens]
Length = 208
Score = 426 bits (1094), Expect = e-120
Identities = 207/208 (99%), Positives = 207/208 (99%)
Query: 1 MDELEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRL 60
MDELEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRL
Sbjct: 1 MDELEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRL 60
Query: 61 RQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRR 120
RQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRR
Sbjct: 61 RQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRR 120
Query: 121 QLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLL 180
QL KGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLL
Sbjct: 121 QLAKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLL 180
Query: 181 LRRPQLPPHSETFLPVLDSGTALTGRPL 208
LRRPQLPPHSETFLPVLDSGTALTGRPL
Sbjct: 181 LRRPQLPPHSETFLPVLDSGTALTGRPL 208
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 55.1 bits (131), Expect = 4e-08
Identities = 47/126 (37%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 76 LRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNA-GPRRQL---PKGVPLRPG 131
LR +R+ PPPP PP+ L++ SG + + P P + A GPRR+ P G PG
Sbjct: 779 LRARRKGPPPP--PPKRLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPG 836
Query: 132 AEPPAPASD-PDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLR-RPQLPPH 189
PPAPA D E PG +PP +SG+G+P G T+ R +P PP
Sbjct: 837 --PPAPAGPASDTEEEEPGPEGTPPSRGSSGEGLPFAEE-----GNLTIKQRPKPAGPPP 889
Query: 190 SETFLP 195
ET +P
Sbjct: 890 RETPVP 895
Score = 37.0 bits (84), Expect = 0.012
Identities = 58/239 (24%), Positives = 78/239 (32%), Gaps = 57/239 (23%)
Query: 1 MDELEAPTATARGTAS---SRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRR 57
+DE P A G S GP P P GP + + + P G
Sbjct: 807 LDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPE------GTPPS 860
Query: 58 RRLRQRDPPADREGEREVLRGQRESPPPPQ---LPPELLTNPSGS-AIQSSPSRFRRVPA 113
R P EG + + + + PPP+ +PP L N + S ++ P R P
Sbjct: 861 RGSSGEGLPFAEEGNLTIKQRPKPAGPPPRETPVPPGLDFNLTESDTVKRRPKCREREPL 920
Query: 114 DNA-----------GPRRQLPKGVPLR-------PGAEP-------------PAPASDPD 142
A GP LP P P EP P+PA P
Sbjct: 921 QTALLAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPP 980
Query: 143 LEPTPPGGLKS-----------PPLPCASGQGVP--GTRRRQNKLGVETLLLRRPQLPP 188
+ P P GL+S PP A+ VP GT + + L P+L P
Sbjct: 981 VPPCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAFSGPKLAP 1039
Score = 30.8 bits (68), Expect = 0.85
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 87 QLPPELLTNPSGSAIQSSPSRFRRVPA-DNAGPRRQLPKGVPLRPGAEPPAPASDPDLEP 145
+L PEL +G + P R P+ ++ G R + +P +P P E
Sbjct: 589 ELSPELQAAMAGGGPEPLPLPPARSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQER 648
Query: 146 TPPGGLKSPPLPCAS--GQGVP 165
P G + PP C+S GQG P
Sbjct: 649 NLPEGTERPPKLCSSLPGQGPP 670
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 55.1 bits (131), Expect = 4e-08
Identities = 47/126 (37%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 76 LRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNA-GPRRQL---PKGVPLRPG 131
LR +R+ PPPP PP+ L++ SG + + P P + A GPRR+ P G PG
Sbjct: 861 LRARRKGPPPP--PPKRLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPG 918
Query: 132 AEPPAPASD-PDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLR-RPQLPPH 189
PPAPA D E PG +PP +SG+G+P G T+ R +P PP
Sbjct: 919 --PPAPAGPASDTEEEEPGPEGTPPSRGSSGEGLPFAEE-----GNLTIKQRPKPAGPPP 971
Query: 190 SETFLP 195
ET +P
Sbjct: 972 RETPVP 977
Score = 37.0 bits (84), Expect = 0.012
Identities = 58/239 (24%), Positives = 78/239 (32%), Gaps = 57/239 (23%)
Query: 1 MDELEAPTATARGTAS---SRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRR 57
+DE P A G S GP P P GP + + + P G
Sbjct: 889 LDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPE------GTPPS 942
Query: 58 RRLRQRDPPADREGEREVLRGQRESPPPPQ---LPPELLTNPSGS-AIQSSPSRFRRVPA 113
R P EG + + + + PPP+ +PP L N + S ++ P R P
Sbjct: 943 RGSSGEGLPFAEEGNLTIKQRPKPAGPPPRETPVPPGLDFNLTESDTVKRRPKCREREPL 1002
Query: 114 DNA-----------GPRRQLPKGVPLR-------PGAEP-------------PAPASDPD 142
A GP LP P P EP P+PA P
Sbjct: 1003 QTALLAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPP 1062
Query: 143 LEPTPPGGLKS-----------PPLPCASGQGVP--GTRRRQNKLGVETLLLRRPQLPP 188
+ P P GL+S PP A+ VP GT + + L P+L P
Sbjct: 1063 VPPCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAFSGPKLAP 1121
Score = 30.8 bits (68), Expect = 0.85
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 87 QLPPELLTNPSGSAIQSSPSRFRRVPA-DNAGPRRQLPKGVPLRPGAEPPAPASDPDLEP 145
+L PEL +G + P R P+ ++ G R + +P +P P E
Sbjct: 671 ELSPELQAAMAGGGPEPLPLPPARSPSQESIGARSRGSGHSQEQPAPQPSGGDPSPPQER 730
Query: 146 TPPGGLKSPPLPCAS--GQGVP 165
P G + PP C+S GQG P
Sbjct: 731 NLPEGTERPPKLCSSLPGQGPP 752
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 52.0 bits (123), Expect = 4e-07
Identities = 38/138 (27%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 21 GPGTAPPPSCG---RGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLR 77
G PPP G +GP P + Q P + G R R PP +G
Sbjct: 55 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQ------GDKSRS---PRSPPGKPQGPPPQGG 105
Query: 78 GQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAP 137
Q + PPPP P+ G+ Q P + G + + P+ P +P PP
Sbjct: 106 NQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG 165
Query: 138 ASDPDLEPTPPGGLKSPP 155
+ P P PPG + PP
Sbjct: 166 GNQPQGPPPPPGKPQGPP 183
Score = 48.1 bits (113), Expect = 5e-06
Identities = 37/138 (26%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 21 GPGTAPPPSCG---RGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLR 77
G PPP G +GP P + Q P + G R R PP +G
Sbjct: 116 GKPQGPPPQGGNRPQGPPPPGKPQGPPPQ------GDKSRS---PRSPPGKPQGPPPQGG 166
Query: 78 GQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAP 137
Q + PPPP P+ G Q P + G + + + P +P PP
Sbjct: 167 NQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQG 226
Query: 138 ASDPDLEPTPPGGLKSPP 155
+ P P PPG + PP
Sbjct: 227 GNQPQGPPPPPGKPQGPP 244
Score = 47.0 bits (110), Expect = 1e-05
Identities = 45/172 (26%), Positives = 62/172 (36%), Gaps = 22/172 (12%)
Query: 21 GPGTAPPPSCGR---GPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLR 77
G PPP G+ GP P + Q P + + Q PP +G
Sbjct: 177 GKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQ---------SPPGKPQGPPPQGG 227
Query: 78 GQRESPPPPQLPPELLTNPSGSAIQSSPSRFR-RVPADNAGPRRQLPKGVPLRPGAEPPA 136
Q + PPPP P+ G+ Q P + + P G + Q + P +P P
Sbjct: 228 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQ 287
Query: 137 PASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLPP 188
++P P P GG +P P A G P R + G RP PP
Sbjct: 288 EGNNPQGPPPPAGG--NPQQPQAPPAGQPQGPPRPPQGG-------RPSRPP 330
Score = 43.9 bits (102), Expect = 1e-04
Identities = 47/188 (25%), Positives = 68/188 (36%), Gaps = 16/188 (8%)
Query: 7 PTATARGTASSRGCGPGTAPPPSCGRGPETPS-RSQSPKLRRVAKVAGQLRRRRLRQRDP 65
P +G G P PPP +GP +S+SP+ + Q P
Sbjct: 114 PPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPP 173
Query: 66 PADREGEREVLRGQR--ESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLP 123
P + + +G + + PPPP P S SP + P G + Q P
Sbjct: 174 PPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGP 233
Query: 124 KGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRR 183
P +P PP + P P PPG + PP QG ++ ++ G +
Sbjct: 234 PPPPGKPQGPPPQGGNKPQ-GPPPPGKPQGPP-----AQGGSKSQSARSPPG-------K 280
Query: 184 PQLPPHSE 191
PQ PP E
Sbjct: 281 PQGPPQQE 288
Score = 41.2 bits (95), Expect = 6e-04
Identities = 41/153 (26%), Positives = 54/153 (35%), Gaps = 6/153 (3%)
Query: 7 PTATARGTASSRGCGPGTAPPPSCGRGPETPS-RSQSPKLRRVAKVAG---QLRRRRLRQ 62
P +G G P PPP +GP +S+SP+ K G Q +
Sbjct: 53 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPR-SPPGKPQGPPPQGGNQPQGP 111
Query: 63 RDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQL 122
PP +G + + PPPP P S SP + P G + Q
Sbjct: 112 PPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG 171
Query: 123 PKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPP 155
P P +P PP P P PPG + PP
Sbjct: 172 PPPPPGKPQGPPPQGGKKPQ-GPPPPGKPQGPP 203
Score = 40.0 bits (92), Expect = 0.001
Identities = 21/75 (28%), Positives = 31/75 (41%)
Query: 81 ESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASD 140
+ PPPP P+ G+ Q P + G + + P+ P +P PP +
Sbjct: 48 QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQ 107
Query: 141 PDLEPTPPGGLKSPP 155
P P PPG + PP
Sbjct: 108 PQGPPPPPGKPQGPP 122
Score = 28.9 bits (63), Expect = 3.2
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 112 PADNAGPRRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPP 155
P+ G + Q P P +P PP + P P PPG + PP
Sbjct: 39 PSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQ-GPPPPGKPQGPP 81
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 50.4 bits (119), Expect = 1e-06
Identities = 37/139 (26%), Positives = 52/139 (37%), Gaps = 12/139 (8%)
Query: 21 GPGTAPPPSCG---RGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLR 77
G PPP G +GP P + Q P Q + R PP +G
Sbjct: 199 GKPQGPPPQGGNKPQGPPPPGKPQGPP--------PQGDNKSQSARSPPGKPQGPPPQGG 250
Query: 78 GQRESPPPPQLPPELLTNPSGSAIQSSPSRFR-RVPADNAGPRRQLPKGVPLRPGAEPPA 136
Q + PPPP P+ G+ Q P + + P G + + + P +P PP
Sbjct: 251 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQ 310
Query: 137 PASDPDLEPTPPGGLKSPP 155
+ P P PPG + PP
Sbjct: 311 GGNQPQGPPPPPGKPQGPP 329
Score = 49.3 bits (116), Expect = 2e-06
Identities = 38/139 (27%), Positives = 53/139 (38%), Gaps = 12/139 (8%)
Query: 21 GPGTAPPPSCG---RGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLR 77
G PPP G +GP P + Q P + G + R R PP +G
Sbjct: 137 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQ------GDNKSRS--SRSPPGKPQGPPPQGG 188
Query: 78 GQRESPPPPQLPPELLTNPSGSAIQSSPSRFR-RVPADNAGPRRQLPKGVPLRPGAEPPA 136
Q + PPPP P+ G+ Q P + + P + Q + P +P PP
Sbjct: 189 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQ 248
Query: 137 PASDPDLEPTPPGGLKSPP 155
+ P P PPG + PP
Sbjct: 249 GGNQPQGPPPPPGKPQGPP 267
Score = 48.1 bits (113), Expect = 5e-06
Identities = 45/172 (26%), Positives = 63/172 (36%), Gaps = 21/172 (12%)
Query: 21 GPGTAPPPSCG---RGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLR 77
G PPP G +GP P + Q P + +K R PP +G
Sbjct: 261 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSS--------RSPPGKPQGPPPQGG 312
Query: 78 GQRESPPPPQLPPELLTNPSGSAIQSSPSRFR-RVPADNAGPRRQLPKGVPLRPGAEPPA 136
Q + PPPP P+ G+ Q P + + P G + + + P +P P
Sbjct: 313 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQ 372
Query: 137 PASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLPP 188
++P P P GG +P P A G P R + G RP PP
Sbjct: 373 EGNNPQGPPPPAGG--NPQQPQAPPAGQPQGPPRPPQGG-------RPSRPP 415
Score = 46.6 bits (109), Expect = 2e-05
Identities = 37/139 (26%), Positives = 52/139 (37%), Gaps = 13/139 (9%)
Query: 21 GPGTAPPPSCG---RGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLR 77
G PPP G +GP P + Q P + G R R PP +G
Sbjct: 76 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQ------GDKSRS---PRSPPGKPQGPPPQGG 126
Query: 78 GQRESPPPPQLPPELLTNPSGSAIQSSPSRFR-RVPADNAGPRRQLPKGVPLRPGAEPPA 136
Q + PPPP P+ G+ Q P + + P + + + P +P PP
Sbjct: 127 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQ 186
Query: 137 PASDPDLEPTPPGGLKSPP 155
+ P P PPG + PP
Sbjct: 187 GGNQPQGPPPPPGKPQGPP 205
Score = 43.9 bits (102), Expect = 1e-04
Identities = 25/91 (27%), Positives = 36/91 (39%)
Query: 65 PPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPK 124
PP +G Q + PPPP P+ G+ Q P + G + + P+
Sbjct: 53 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPR 112
Query: 125 GVPLRPGAEPPAPASDPDLEPTPPGGLKSPP 155
P +P PP + P P PPG + PP
Sbjct: 113 SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 143
Score = 37.4 bits (85), Expect = 0.009
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
Query: 65 PPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPK 124
PP +G + + PPPP P S SP + P G + Q P
Sbjct: 74 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPP 133
Query: 125 GVPLRPGAEPPAPASDPDLEPTPPGGLKSPP 155
P +P PP + P P PPG + PP
Sbjct: 134 PPPGKPQGPPPQGGNKPQ-GPPPPGKPQGPP 163
Score = 32.7 bits (73), Expect = 0.22
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 79 QRESPP-----PPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAE 133
Q ESP P PP+ P G SP + P G + Q P P +P
Sbjct: 25 QEESPSLIAGNPQGAPPQGGNKPQGPP---SPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 81
Query: 134 PPAPASDPDLEPTPPGGLKSPP 155
PP + P P PPG + PP
Sbjct: 82 PPQGGNKPQ-GPPPPGKPQGPP 102
Score = 30.8 bits (68), Expect = 0.85
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Query: 69 REGEREVLRGQRESPPP-----PQLPPELLTNPSGSAIQ--SSPSRFRRVPADNAGPRRQ 121
+E ++ G + PP PQ PP P G Q + P P GP Q
Sbjct: 25 QEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 84
Query: 122 ---LPKGVPLRPGAEPPAPASDPDLEP-TPPGGLKSPP 155
P+G P + P P D P +PPG + PP
Sbjct: 85 GGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPP 122
Score = 29.6 bits (65), Expect = 1.9
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 123 PKGVPLRPGAEPPAPASDPDLE--PTPPGG--LKSPPLPCASGQGVP 165
P+G P + G +P P S P P P GG + PP P QG P
Sbjct: 36 PQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 82
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.1 bits (118), Expect = 1e-06
Identities = 49/184 (26%), Positives = 63/184 (34%), Gaps = 24/184 (13%)
Query: 6 APTATARGTASSRGCG--PGTAPPPSC------GRGPETPSRSQSPKLRRVAKVAGQLRR 57
APT +A S +G P P PS GP TP+ Q+P L + + R
Sbjct: 864 APTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARA 923
Query: 58 RRLRQRDP--------PADREGEREVLRGQRESPPPPQLP-PELLTNPSGSAIQSSPSR- 107
+ P P +G +P P P P T PS ++PS
Sbjct: 924 TPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPK 983
Query: 108 ------FRRVPADNAGPRRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASG 161
P+ GP PKG P P PP+P P P P G P S
Sbjct: 984 GAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSP 1043
Query: 162 QGVP 165
+G P
Sbjct: 1044 KGSP 1047
Score = 48.1 bits (113), Expect = 5e-06
Identities = 41/152 (26%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 22 PGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRGQRE 81
P A PPS GP TPS +P PP+ + G +
Sbjct: 942 PPAATPPSPKGGPATPSPKWAPTPPAAT---------------PPSPKGGP--ATPSPKG 984
Query: 82 SPPPPQLPPELLTNPSGSAIQSSPSRFRRVPA------DNAGPRRQLPKGVPLRPGAEPP 135
+P PP P +P G SP PA + PKG P A PP
Sbjct: 985 APTPPAATPP---SPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPP 1041
Query: 136 APASDPDLEPTPPGGLKSPPLPCASGQGVPGT 167
+P P P P G +P S +G P T
Sbjct: 1042 SPKGSPAATPLPKGAPTTPAATLPSPKGGPAT 1073
Score = 47.0 bits (110), Expect = 1e-05
Identities = 52/194 (26%), Positives = 64/194 (32%), Gaps = 38/194 (19%)
Query: 6 APTATARGTASSRGCGPGT-----------APPPSCGRGPETPSRSQSPKLRRVAKVAGQ 54
APT A S +G GP T A PPS GP TPS +P + +
Sbjct: 1056 APTTPAATLPSPKG-GPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPK 1114
Query: 55 LRRRRLRQRDPPADREGEREVLRGQRESPPP---PQLPPELLTNPSGSAIQSSPSRFRRV 111
+ P +G +PPP P P +P G P
Sbjct: 1115 GGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTT 1174
Query: 112 PA-----DNAGPRRQLPKGVPLRPGAEPP-------------APASDPDLEPTPPGGLKS 153
PA G PKG P P A PP AP + P+P GGL +
Sbjct: 1175 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1234
Query: 154 PPLPCASGQGVPGT 167
P S +G P T
Sbjct: 1235 P-----SPKGAPTT 1243
Score = 47.0 bits (110), Expect = 1e-05
Identities = 44/170 (25%), Positives = 54/170 (31%), Gaps = 28/170 (16%)
Query: 6 APTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDP 65
APT A S +G GP T PP +G TP + P L+ P
Sbjct: 1240 APTTPAATPPSPKG-GPATPPP----KGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTP 1294
Query: 66 PADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKG 125
P+ + G SPP P T PS +P PKG
Sbjct: 1295 PSPKGGPAT-------SPPKGAPTPPAATPPSPKGSPGTPP----------------PKG 1331
Query: 126 VPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLG 175
P P PP+P P L T P P P + P +K G
Sbjct: 1332 APTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGG 1381
Score = 46.2 bits (108), Expect = 2e-05
Identities = 49/193 (25%), Positives = 67/193 (34%), Gaps = 53/193 (27%)
Query: 6 APTATARGTASSRGCGPGT-----------APPPSCGRGPETPSRSQSPKLRRVAKVAGQ 54
APT A S +G GP T A PPS GP TPS +P V +
Sbjct: 962 APTPPAATPPSPKG-GPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPS-- 1018
Query: 55 LRRRRLRQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGS--------------- 99
+ PA + +PP P+ P P G+
Sbjct: 1019 -------PKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGP 1071
Query: 100 ---AIQSSPSRFRRVP-ADNAGPRRQLPKGVPLRPGAEPP-------------APASDPD 142
+++ +P+ P + GP PKG P+ P A PP AP +
Sbjct: 1072 ATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAA 1131
Query: 143 LEPTPPGGLKSPP 155
P+P GGL +PP
Sbjct: 1132 TPPSPKGGLATPP 1144
Score = 45.4 bits (106), Expect = 3e-05
Identities = 59/224 (26%), Positives = 80/224 (35%), Gaps = 39/224 (17%)
Query: 6 APTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDP 65
APT A S +G A PS GP TPS + P A + P
Sbjct: 1332 APTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGP-----TPPAATPSHKGGPAMTP 1386
Query: 66 PADREGER-EVLRGQRESPP----PPQLPPELLTNPSGSAIQS---------SPSRFRRV 111
P+ + G +G SP P+ P G+A S +P ++
Sbjct: 1387 PSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKA 1446
Query: 112 PADNA---GPRRQLPKGVPLRPGAEPPAP-----------ASDPDLEPTPPGGLKSPPLP 157
PA +A GP KG P P PP+P +S P P P + +P LP
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLP 1506
Query: 158 C---ASGQGVPGT--RRRQNKLGVETLLLRR-PQLPPHSETFLP 195
+S + VP T RR TLL ++ P E +P
Sbjct: 1507 AVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIP 1550
Score = 37.0 bits (84), Expect = 0.012
Identities = 45/188 (23%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 4 LEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSP-KLRRVAKVAGQLRRRRLRQ 62
+ APT T S P P PS G + P + +P L V K + + + +
Sbjct: 1696 ITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDAS 1755
Query: 63 RDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPS-----RFRRVPADNAG 117
P +G + +P ++L P +++ ++PS P
Sbjct: 1756 HSP----KGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLP 1811
Query: 118 PRRQ-LPK--GVPLRPGAEPPAPASDPDLEPTPP-----GG------LKSPPLPCASGQG 163
P++Q LP G+ L ++P APA + +L P P GG L + P P ++G
Sbjct: 1812 PKQQFLPSSPGLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTPKSAGIP 1871
Query: 164 VPGTRRRQ 171
VP +Q
Sbjct: 1872 VPTPSAKQ 1879
Score = 33.9 bits (76), Expect = 0.10
Identities = 45/168 (26%), Positives = 61/168 (36%), Gaps = 37/168 (22%)
Query: 6 APTATARGTASSRGCGPGTA--PP----PSCGRGPETPSRSQSPKLRRVAKVAGQLRRRR 59
APTAT + P A PP PS + P P+ ++P + +
Sbjct: 1528 APTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASS------ 1581
Query: 60 LRQRDPPADREGEREVLRGQRESPPPPQ--LPPELLTNPSGSAIQSSPSRFRRVPADNAG 117
PPA V + P P+ L P +T+PS + P+ P+ G
Sbjct: 1582 -----PPA-------VTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAV--TPPSPEKG 1627
Query: 118 PRRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVP 165
P PKG P P P P+S D PT P + C G VP
Sbjct: 1628 PATPAPKGTPTSP---PVTPSSLKD-SPTSPAS-----VTCKMGATVP 1666
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 48.5 bits (114), Expect = 4e-06
Identities = 46/154 (29%), Positives = 62/154 (40%), Gaps = 13/154 (8%)
Query: 2 DELEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLR 61
+++ +P AT A S GP P P+ GP P R+ L + +V ++ +
Sbjct: 331 EKVVSPPATPDNPADSPAPGPLGPPGPTGPPGPPGPPRNVLSPLN-LEEVQKKVAEQTFI 389
Query: 62 QRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAG---P 118
+ D ++ GQR +PPPP PP T S S P P +G P
Sbjct: 390 KDDYLETISSPKDFGLGQRATPPPPP-PPTYRTVVSSPGPGSGPG-----PGTTSGASSP 443
Query: 119 RRQLPKGVPLR---PGAEPPAPASDPDLEPTPPG 149
R VP R P PP P S P L P PG
Sbjct: 444 ARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKPG 477
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 48.5 bits (114), Expect = 4e-06
Identities = 49/185 (26%), Positives = 63/185 (34%), Gaps = 39/185 (21%)
Query: 21 GPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRGQR 80
G G PPP G P P +GQ PP G + Q+
Sbjct: 466 GKGMMPPPPMGMMPPPPPPP-----------SGQ----------PPPPPSGPLPPWQQQQ 504
Query: 81 ESPPPPQLPPELL-------------TNPSGSAIQSSPSRFRRVPADNAGPRRQLPKG-- 125
+ PPPP P + T + + S P ++ A A P +G
Sbjct: 505 QQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNP 564
Query: 126 --VPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRR 183
VPL PG +PP P P P PP G +P G G P + TL R+
Sbjct: 565 TMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMIPPRGGDG-PSHESEDFPRPLVTLPGRQ 623
Query: 184 PQLPP 188
PQ P
Sbjct: 624 PQQRP 628
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 48.5 bits (114), Expect = 4e-06
Identities = 46/147 (31%), Positives = 55/147 (37%), Gaps = 14/147 (9%)
Query: 32 RGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRGQRESPPPPQ---- 87
R +PSRS SP R+ K RRR PP R R +PPP +
Sbjct: 520 RRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRR------RSPSPAPPPRRRRTP 573
Query: 88 LPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASDPDLEPTP 147
PP PS + SPS R P RR P P R A PP P P+P
Sbjct: 574 TPPPRRRTPSPPPRRRSPSPRRYSPPIQ---RRYSPSPPPKRRTASPPPPPK-RRASPSP 629
Query: 148 PGGLKSPPLPCASGQGVPGTRRRQNKL 174
P + P + P T+RR L
Sbjct: 630 PPKRRVSHSPPPKQRSSPVTKRRSPSL 656
Score = 41.2 bits (95), Expect = 6e-04
Identities = 42/155 (27%), Positives = 56/155 (36%), Gaps = 9/155 (5%)
Query: 22 PGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLR-----RRRLRQRDPPADREGEREVL 76
P APPP R P P R ++P + R +RR PP R
Sbjct: 561 PSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPP 620
Query: 77 RGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEP-P 135
+R SP PP P +++ +SSP RR P+ ++ R+ R P P
Sbjct: 621 PKRRASPSPP--PKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQP 678
Query: 136 APASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRR 170
P P P SPP P G RR+
Sbjct: 679 NKRHSPSPRPRAPQTSSSPP-PVRRGASSSPQRRQ 712
Score = 40.8 bits (94), Expect = 8e-04
Identities = 39/129 (30%), Positives = 51/129 (39%), Gaps = 16/129 (12%)
Query: 38 SRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPS 97
SRS SP+ R + RRR +R PP R R S P + + S
Sbjct: 306 SRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRH---------RRSRSPVRRRRRSSASLS 356
Query: 98 GSAIQSSPSRFR----RVPADNAGPRRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKS 153
GS+ SS SR R + P + P R+ + L P A PP P TPP +
Sbjct: 357 GSSSSSSSSRSRSPPKKPPKRTSSPPRKTRR---LSPSASPPRRRHRPSPPATPPPKTRH 413
Query: 154 PPLPCASGQ 162
P P S +
Sbjct: 414 SPTPQQSNR 422
Score = 32.0 bits (71), Expect = 0.38
Identities = 34/125 (27%), Positives = 43/125 (34%), Gaps = 8/125 (6%)
Query: 34 PETPSRSQSPKLRRVAKVAGQLRRRRLRQRD---PPADREGEREVLRGQRESPPPPQLPP 90
P + SRS+S R + RRR R R P R R +R +PP PP
Sbjct: 276 PRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPP 335
Query: 91 ELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASDPDLEPTPPGG 150
P +S R RR A +G P +PP S P +
Sbjct: 336 -----PRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSP 390
Query: 151 LKSPP 155
SPP
Sbjct: 391 SASPP 395
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 48.1 bits (113), Expect = 5e-06
Identities = 53/193 (27%), Positives = 76/193 (39%), Gaps = 31/193 (16%)
Query: 23 GTAPPPSCGRGPET-----PSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLR 77
G+ PS P++ PSRS P++R + QLRR++ R ++P R E+ LR
Sbjct: 255 GSTTLPSTWTAPQSRLTARPSRSPEPQIRESEQRDPQLRRKQQRWKEPLMPRREEKYPLR 314
Query: 78 GQRESPP--PPQLP----------------PELLTNPSGSAIQSSPSRFRRVPADNAGPR 119
G PP P ++P P+ + P +P + +P P
Sbjct: 315 GTDPLPPGQPQRIPLPGQPLQPQPILTPGQPQKIPTPGQHQPILTPGHSQPIPTPGQ-PL 373
Query: 120 RQLPKGVPLRPGAEPPAPASDPDLEPTP---PG-GLKSPPLPCASGQGVPGTRRRQNKLG 175
P P RP P P L P P PG L+ PP G P + + + G
Sbjct: 374 PPQPIPTPGRPLTPQPIPTPGRPLTPQPIQMPGRPLRLPPPLRLLRPGQPMSPQLRQTQG 433
Query: 176 VETLLLRRPQLPP 188
L L +P LPP
Sbjct: 434 ---LPLPQPLLPP 443
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 47.8 bits (112), Expect = 7e-06
Identities = 53/191 (27%), Positives = 67/191 (35%), Gaps = 29/191 (15%)
Query: 20 CG-PGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRG 78
CG PGTA P +P +P + + R P + E E E G
Sbjct: 65 CGDPGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQER------PEEEGEDEAEASSG 118
Query: 79 QRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKG------------- 125
E P P L P +P S R V + AG RR+L +G
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSRPRALLHGL 178
Query: 126 -----VPLRPG-AEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETL 179
+ L P A+ P AS P P P SPP P +G P R +K V
Sbjct: 179 RGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPP---LRSHKPTVAVR 235
Query: 180 LLRRPQLPPHS 190
+L P PP S
Sbjct: 236 ILPAPPRPPIS 246
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 47.8 bits (112), Expect = 7e-06
Identities = 53/191 (27%), Positives = 67/191 (35%), Gaps = 29/191 (15%)
Query: 20 CG-PGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRG 78
CG PGTA P +P +P + + R P + E E E G
Sbjct: 65 CGDPGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQER------PEEEGEDEAEASSG 118
Query: 79 QRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKG------------- 125
E P P L P +P S R V + AG RR+L +G
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSRPRALLHGL 178
Query: 126 -----VPLRPG-AEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETL 179
+ L P A+ P AS P P P SPP P +G P R +K V
Sbjct: 179 RGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPP---LRSHKPTVAVR 235
Query: 180 LLRRPQLPPHS 190
+L P PP S
Sbjct: 236 ILPAPPRPPIS 246
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 47.8 bits (112), Expect = 7e-06
Identities = 53/191 (27%), Positives = 67/191 (35%), Gaps = 29/191 (15%)
Query: 20 CG-PGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRG 78
CG PGTA P +P +P + + R P + E E E G
Sbjct: 65 CGDPGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQER------PEEEGEDEAEASSG 118
Query: 79 QRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKG------------- 125
E P P L P +P S R V + AG RR+L +G
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSRPRALLHGL 178
Query: 126 -----VPLRPG-AEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETL 179
+ L P A+ P AS P P P SPP P +G P R +K V
Sbjct: 179 RGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPP---LRSHKPTVAVR 235
Query: 180 LLRRPQLPPHS 190
+L P PP S
Sbjct: 236 ILPAPPRPPIS 246
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 47.8 bits (112), Expect = 7e-06
Identities = 35/98 (35%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 68 DREGEREVLRGQRESPPPPQLP---PELLTNPSGSAIQSSP----SRFRRVPADNAGPRR 120
D E E SPPP ++P P + P + SP PA AGP
Sbjct: 1064 DEEEEERPAALPSASPPPREVPVPTPAPVEVPVPERVAGSPVTPLPEQEASPARPAGPTE 1123
Query: 121 QLPKGVPLRPG---AEPPAPASDPDLEPTPPGGLKSPP 155
+ P PLRP A PPAPA PD P+ P L PP
Sbjct: 1124 ESPPSAPLRPPEPPAGPPAPAPRPDERPSSPIPLLPPP 1161
Score = 33.5 bits (75), Expect = 0.13
Identities = 39/144 (27%), Positives = 47/144 (32%), Gaps = 23/144 (15%)
Query: 10 TARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVA-KVAGQLRRRRLRQRDPPA- 67
T S G GP T PP P+ S P R + K GQ + D
Sbjct: 526 TGSEVPSGSGHGPCTPPPAPANFEDVAPTGSGEPGATRESPKANGQNQASPCSSGDDMEI 585
Query: 68 ---DREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPK 124
DR G + PPPP PP P + S P + P Q
Sbjct: 586 SDDDRGGSPPPAPTPPQQPPPPPPPPP----PPPPYLASLPLGY---------PPHQPAY 632
Query: 125 GVPLRPGAEPPAPASDPDLEPTPP 148
+P RP PP P+ P PP
Sbjct: 633 LLPPRPDGPPP-----PEYPPPPP 651
Score = 29.6 bits (65), Expect = 1.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 11/52 (21%)
Query: 121 QLPKGVPLRPGAEPPAPASDPDLEPT---PPGGLKSPP--------LPCASG 161
++P G P PPAPA+ D+ PT PG + P PC+SG
Sbjct: 529 EVPSGSGHGPCTPPPAPANFEDVAPTGSGEPGATRESPKANGQNQASPCSSG 580
Score = 28.1 bits (61), Expect = 5.5
Identities = 35/132 (26%), Positives = 45/132 (34%), Gaps = 31/132 (23%)
Query: 93 LTNPSGSAIQSSPSRFRRVPADNAG---------------PRRQLPKGVPLRPGAE---- 133
L++ S S+ SS S+FR A+ PRR + P P AE
Sbjct: 344 LSSSSSSSSSSSSSQFRSSDANYPAYYESWNRYQRHTSYPPRRATREEPPGAPFAENTAE 403
Query: 134 ----------PPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRR 183
PP P+ D + PP PP P G G G + V T R
Sbjct: 404 RFPPSYTSYLPPEPSRPTDQDYRPPASEAPPPEPPEPGGGGGGGGPSPEREEVRT--SPR 461
Query: 184 PQLPPHSETFLP 195
P P S + P
Sbjct: 462 PASPARSGSPAP 473
Score = 27.7 bits (60), Expect = 7.2
Identities = 35/129 (27%), Positives = 43/129 (33%), Gaps = 13/129 (10%)
Query: 69 REGEREVLRGQRESP--PPPQLPPELLTNPSGS----AIQSSPSRFRRVPADNAGPRRQL 122
R+ EV G P PPP P+GS A + SP + A +
Sbjct: 524 RDTGSEVPSGSGHGPCTPPPAPANFEDVAPTGSGEPGATRESPKANGQNQASPCSSGDDM 583
Query: 123 PKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLR 182
R G+ PPAP P PP PP + G P + LL
Sbjct: 584 EISDDDRGGSPPPAPTPPQQPPPPPPPPPPPPPYLASLPLGYPPHQPAY-------LLPP 636
Query: 183 RPQLPPHSE 191
RP PP E
Sbjct: 637 RPDGPPPPE 645
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 47.4 bits (111), Expect = 9e-06
Identities = 51/204 (25%), Positives = 76/204 (37%), Gaps = 28/204 (13%)
Query: 7 PTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQL----RRRRLRQ 62
PT R + SS T P P+ R P Q P R ++ A L R +
Sbjct: 201 PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 260
Query: 63 RDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQL 122
P A + +G + PP PP P+ + SSP P+ +A + Q
Sbjct: 261 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSP---LATPSPSAALQSQA 317
Query: 123 PKGVPLRPGAE-------------PPAPASDPDLE--PTPPGGLKSPPLPCASGQGVPGT 167
P +P P + PP+P++ P L+ P+PP +PP + G P
Sbjct: 318 PPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPA---TPPSQATTSLGSPTL 374
Query: 168 RRRQNKL---GVETLLLRRPQLPP 188
+ + L + L PQ PP
Sbjct: 375 QATHSFLPSPPLSPLATPPPQAPP 398
Score = 37.7 bits (86), Expect = 0.007
Identities = 38/110 (34%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 82 SPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASDP 141
+PP P PP L T PS A S + LP PL P A PP P + P
Sbjct: 341 APPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLP-SPPLSPLATPP-PQAPP 398
Query: 142 DLEPTPPGGLKSPPLPCASGQGVP-GTRRRQNKLGVETLLLRRPQLPPHS 190
L P L++PP P AS P T Q + LL+ P PP S
Sbjct: 399 ALALPP---LQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPS 445
Score = 35.0 bits (79), Expect = 0.045
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 82 SPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASDP 141
SPPP + P+ + S + + P A P Q+P P P + P +P++ P
Sbjct: 441 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP---PSPPASPPMSPSATP 497
Query: 142 DLEPTPPGGLKSPPLPCA 159
+ PP L +PPL A
Sbjct: 498 PPQAPPP--LAAPPLQLA 513
Score = 34.7 bits (78), Expect = 0.059
Identities = 34/109 (31%), Positives = 40/109 (36%), Gaps = 12/109 (11%)
Query: 84 PPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPK-GVPLRPGAEPP---APAS 139
PPPQ PP L T P +Q+ PS PA G P +P+ P A PP P
Sbjct: 515 PPPQAPPALATPP----LQALPS----PPASFPGQAPFSPSASLPMSPLATPPPQAPPVL 566
Query: 140 DPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLPP 188
L PP SP L PG + + L P PP
Sbjct: 567 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPP 615
Score = 33.9 bits (76), Expect = 0.10
Identities = 64/230 (27%), Positives = 89/230 (38%), Gaps = 45/230 (19%)
Query: 6 APTATARGTASSRGCGPGTAPPPSCGRGPET-PSRSQSP-KLRRVAKVAGQLRRRRLRQR 63
AP A +A + P + PP S GRG P+++ SP + + +G R L Q+
Sbjct: 74 APRAGPTRSAGTSSRNPASRPPAS-GRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQK 132
Query: 64 DPPADREGEREVLRGQ-RESPPPPQLPPELLTNPSGSAIQS-SPSRFRRVPADNAGPRRQ 121
E V RG+ E+P L + SG + SP+ RR A AG
Sbjct: 133 G--LRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRA--AGTEVG 188
Query: 122 LPKGVPL---RPGAEPP-----APASDPDLEPTPP--------GGLKSP----------P 155
LP+ P RP E P + + EP+P GGL+ P P
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP 248
Query: 156 L--PCASGQGVPGTRR------RQNKLGVETLLLRRPQLPPHSETFLPVL 197
L P SG GT R + G++ LR PQ+ P + P L
Sbjct: 249 LSSPARSGPSARGTPRAPAHPSQPKPKGLQA--LRPPQVTPPRKDAAPAL 296
Score = 33.9 bits (76), Expect = 0.10
Identities = 34/112 (30%), Positives = 41/112 (36%), Gaps = 14/112 (12%)
Query: 83 PPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRP-GAEPPAPASDP 141
P PP PP +PS + +P P A P Q P + P A P PAS P
Sbjct: 483 PSPPASPP---MSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFP 539
Query: 142 DLEP-TPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLPPHSET 192
P +P L PL Q P + LL+ P PP S T
Sbjct: 540 GQAPFSPSASLPMSPLATPPPQAPP---------VLAAPLLQVPPSPPASPT 582
Score = 30.8 bits (68), Expect = 0.85
Identities = 28/95 (29%), Positives = 34/95 (35%), Gaps = 13/95 (13%)
Query: 83 PPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLR--------PGAEP 134
PPPP P L + A+ P R A P+ P R P + P
Sbjct: 35 PPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRP 94
Query: 135 PAPASD---PDLEPTPPGGLKSPPLPCASGQGVPG 166
PA P + T PG + SP ASG PG
Sbjct: 95 PASGRGERAPPAKNTSPGPVSSPGR--ASGTTRPG 127
Score = 29.6 bits (65), Expect = 1.9
Identities = 35/117 (29%), Positives = 44/117 (37%), Gaps = 15/117 (12%)
Query: 83 PPPPQLPP--ELLTN----PSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPA 136
P PP PP L T P+ A+ + F P+ P P+ P A PP+
Sbjct: 409 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS 468
Query: 137 PASDPDLEPTPPGGLKSPPLPCASGQGVPGTR---RRQNKLGVETLLLRR--PQLPP 188
A P L P L+ PP P AS P + L L L + PQ PP
Sbjct: 469 QA-PPSLAAPP---LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPP 521
Score = 28.5 bits (62), Expect = 4.2
Identities = 45/182 (24%), Positives = 60/182 (32%), Gaps = 39/182 (21%)
Query: 1 MDELEAPTATARGTA-----SSRGCGPGTAPPPSCG---RGP---ETPSRSQSPKLRRVA 49
+ L +P A+ G A +S P PPP P PS SP L+
Sbjct: 528 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP- 586
Query: 50 KVAGQLRRRRLRQRDPPADREGEREVLRGQRESPPPP-QLPPELLTNPS----GSAIQSS 104
RR P G R L PPPP + P L+ P S+ S+
Sbjct: 587 --------RRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATST 638
Query: 105 PSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGV 164
P R ++GP G +P D +L P P P + +G
Sbjct: 639 PEELRGY---DSGPE-----------GGAAASPPPDAELAACHPAAWSRGPAPPLAFRGA 684
Query: 165 PG 166
PG
Sbjct: 685 PG 686
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 47.4 bits (111), Expect = 9e-06
Identities = 58/185 (31%), Positives = 70/185 (37%), Gaps = 31/185 (16%)
Query: 22 PGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADRE-------GERE 74
PG P GP S SQ P+L + + R PP DR+ GE
Sbjct: 420 PGPPEFPQHTPGPVPNSFSQPPRLPL---------QDQWRAPPPPQDRDPFFLGVSGEPR 470
Query: 75 V---LRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRV-PADN-AGPRRQLPKGVPLR 129
L ++ SPPPP PP LL N S SP F + PA N G + P+ P+R
Sbjct: 471 FPSHLFLEQRSPPPPPPPPTLL-NSSHPVPTQSPLPFTQPGPAFNQQGQQPVFPRERPVR 529
Query: 130 PGAEPPAPA-----SDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRP 184
P +PP P S P T P P GQ T + N G L P
Sbjct: 530 PALQPPGPVGILHFSQPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQGP----LHPP 585
Query: 185 QLPPH 189
PPH
Sbjct: 586 LPPPH 590
Score = 27.3 bits (59), Expect = 9.4
Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 22/174 (12%)
Query: 25 APPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRGQRESPP 84
+PP G + K++ + VA + P D E L+ + +
Sbjct: 741 SPPSRAVAGSRSSQGKTEVKVKPASPVAQPKEEAKTETEFPDEDEETRLYRLKIEEQK-- 798
Query: 85 PPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASDPDLE 144
+L E+L Q + +R + + A ++QL PPA + L
Sbjct: 799 --RLREEILKQKELRRQQQAGARKKELLERLAQQQQQLY-------APPPPAEQEEQALS 849
Query: 145 PTPPGGLKSPPLPCASGQGVPGTRRRQ---NKLGVETLLLRRPQLPPHSETFLP 195
P+P G +P LP PG + RQ N+L V+ + + P + F+P
Sbjct: 850 PSPTNG--NPLLP------FPGAQVRQNVKNRLLVKNQDVSISNVQPKTSNFVP 895
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 46.6 bits (109), Expect = 2e-05
Identities = 43/155 (27%), Positives = 58/155 (37%), Gaps = 18/155 (11%)
Query: 21 GPGTAPPPSCGRGPETPSRSQSPKLRRV-------AKVAGQLRRRRLRQRDP-PADREG- 71
G T PP P +P ++Q PK RV A V+ L DP P+DR G
Sbjct: 589 GTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGP 648
Query: 72 -------EREVLRGQRESPPPPQLPPEL--LTNPSGSAIQSSPSRFRRVPADNAGPRRQL 122
+R V+ + P P PP NP+ A+ + V +A P+
Sbjct: 649 QILTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPP 708
Query: 123 PKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLP 157
L P E P + D P+PP PP P
Sbjct: 709 TPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPP 743
Score = 37.7 bits (86), Expect = 0.007
Identities = 54/219 (24%), Positives = 71/219 (32%), Gaps = 61/219 (27%)
Query: 14 TASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGER 73
T S G G PP P+ S P L G RR PP E
Sbjct: 539 TGGSEGAGAAPCPP--------NPANSWVPGLS-----PGGSRR-------PPRSPERTL 578
Query: 74 EVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRV---------------------- 111
G P LPP+ L P S ++ P + RV
Sbjct: 579 SPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSS 638
Query: 112 ---PADNAGPRRQLPKG--VPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPC-ASGQGVP 165
P+D +GP+ P G + P + PAP S P +P P +P P A+ VP
Sbjct: 639 DPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKPRSP----NPAAPALAAPAVVP 694
Query: 166 GTRRRQNKLGVETLLLRRPQLPPHSETFLPVLDSGTALT 204
G + PQ PP +T L L ++
Sbjct: 695 GPVSTTD---------ASPQSPPTPQTTLTPLQESPVIS 724
Score = 34.7 bits (78), Expect = 0.059
Identities = 45/185 (24%), Positives = 63/185 (34%), Gaps = 24/185 (12%)
Query: 11 ARGTASSRGCGPGTAPPPSCGRGPETPS------RSQSPKLRRVAKVAGQLRRRRLRQRD 64
+ G S PPP G G +PS S + +R +++G+ R +R
Sbjct: 438 SEGQPESSTASNSVVPPPQGGSGRGSPSGGSTAEASDTLSIRSSGQLSGRSVSLRKLKRP 497
Query: 65 PPADREGEREVLRG------------QRESPPPPQLP-PELLTNPSGSAIQSSPSRFRR- 110
PP R RG + E PQLP P G+ P
Sbjct: 498 PPPPRRTHSLHQRGLAVPDGPLGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANS 557
Query: 111 -VPADNAGPRRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRR 169
VP + G R+ P+ P R + +S PP GL P P + G+ P
Sbjct: 558 WVPGLSPGGSRRPPRS-PERTLSPSSGYSSQSGTPTLPPKGLAGP--PASPGKAQPPKPE 614
Query: 170 RQNKL 174
R L
Sbjct: 615 RVTSL 619
Score = 32.3 bits (72), Expect = 0.29
Identities = 55/222 (24%), Positives = 73/222 (32%), Gaps = 54/222 (24%)
Query: 6 APTATARGTASSR------GCGPGTAPP-PSCGRGPETPSRSQSPKLRRVAKVAGQ---- 54
AP ++A G + GC G PP G TPS Q +LR V G
Sbjct: 843 APASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVTPSLLQMVRLRSVGAPGGAPTPA 902
Query: 55 ---------LRRRRLRQRDP-PADREGEREVLR----------GQRESPP--PPQLPPEL 92
LRR + P PA G +R G + P PP+ P
Sbjct: 903 LGPSAPQKPLRRALSGRASPVPAPSSGLHAAVRLKACSLAASEGLSSAQPNGPPEAEPRP 962
Query: 93 LTNPSGSA--IQSSPSRF----------------RRVPADNAGPRRQLPKGVPLRPGAEP 134
+P+ +A I S SR R + A+ Q P P + P
Sbjct: 963 PQSPASTASFIFSKGSRKLQLERPVSPETQADLQRNLVAELRSISEQRPPQAPKKSPKAP 1022
Query: 135 PAPASDPDLEPTPPGGLKSP---PLPCASGQGVPGTRRRQNK 173
P A P + PP P PL G+P T+ R +
Sbjct: 1023 PPVARKPSVGVPPPASPSYPRAEPLTAPPTNGLPHTQDRTKR 1064
Score = 30.8 bits (68), Expect = 0.85
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 64 DPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLP 123
+ P+ E E L+ PPPP P E + S + F V A P P
Sbjct: 752 EAPSASETAEEPLQDPNWPPPPPPAPEE--QDLSMADFPPPEEAFFSV----ASPEPAGP 805
Query: 124 KGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCA 159
G P + + +S L+ PPG PP P A
Sbjct: 806 SGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPA 841
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 46.2 bits (108), Expect = 2e-05
Identities = 43/164 (26%), Positives = 61/164 (37%), Gaps = 22/164 (13%)
Query: 4 LEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQS-----------PKLRRVAKVA 52
L P A GT PGT PP+ GP P Q+ PK
Sbjct: 338 LTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGV 397
Query: 53 GQLRRRRLRQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVP 112
G+ ++ PP + G + L Q P + P P+ + +Q ++P
Sbjct: 398 GKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAP-----GPTKTPVQQPGP--GKIP 450
Query: 113 ADNAGP-RRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPP 155
A AGP + + P +P ++ P PA P P PG K PP
Sbjct: 451 AQQAGPGKTSAQQTGPTKPPSQLPGPAKPP---PQQPGPAKPPP 491
Score = 33.5 bits (75), Expect = 0.13
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 82 SPPPPQLPPELLTNP---SGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPA 138
+P P P+L T P + + +SSP + P +A P++ L K + +PP
Sbjct: 651 APVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPK---KPPPLV 707
Query: 139 SDPDLEPTPPGGLKSPP 155
P L +P K PP
Sbjct: 708 KQPTLHGSPSAKAKQPP 724
Score = 33.5 bits (75), Expect = 0.13
Identities = 49/195 (25%), Positives = 70/195 (35%), Gaps = 36/195 (18%)
Query: 21 GPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRGQR 80
G T P P G P+ QSPK + Q RR L L
Sbjct: 874 GSPTPPGPRPTAGQTVPTPQQSPKPQE------QSRRFSLN--------------LGSIT 913
Query: 81 ESPPP-PQLPPELLTNPS---GSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPA 136
++P P P E +T G++I S S A GP Q G P++ + PA
Sbjct: 914 DAPKSQPTTPQETVTGKLFGFGASIFSQASNLIST-AGQPGPHSQSGPGAPMK---QAPA 969
Query: 137 PASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLP----PHSET 192
P+ P + P ++PP P S +P ++ E L + Q P +E
Sbjct: 970 PSQPPTSQGPPKSTGQAPPAPAKS---IP-VKKETKAPAAEKLEPKAEQAPTVKRTETEK 1025
Query: 193 FLPVLDSGTALTGRP 207
P + +LT P
Sbjct: 1026 KPPPIKDSKSLTAEP 1040
Score = 30.8 bits (68), Expect = 0.85
Identities = 31/128 (24%), Positives = 41/128 (32%), Gaps = 30/128 (23%)
Query: 65 PPADREGEREVLRGQRESPPPPQLPPELLTNPS-----------------------GSAI 101
PPA G + L Q + PP PP P+ G
Sbjct: 331 PPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKA 390
Query: 102 QSSPSRFRRVPADNAGPRRQ------LPKGVPLRPGAEPPAPASDPDLEPT-PPGGLKSP 154
+ P + PA GP + PK + +PG + PA A P P PG K P
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIP 450
Query: 155 PLPCASGQ 162
G+
Sbjct: 451 AQQAGPGK 458
Score = 30.0 bits (66), Expect = 1.5
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 17/77 (22%)
Query: 81 ESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASD 140
+ P QLP +PS S++ + P F R + L A+PP P
Sbjct: 2369 QEKPASQLPSG---SPSVSSLPAKPRPFFRSSS--------------LDISAQPPPPPPP 2411
Query: 141 PDLEPTPPGGLKSPPLP 157
P P PP PPLP
Sbjct: 2412 PPPPPPPPPPPPPPPLP 2428
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 46.2 bits (108), Expect = 2e-05
Identities = 43/164 (26%), Positives = 61/164 (37%), Gaps = 22/164 (13%)
Query: 4 LEAPTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQS-----------PKLRRVAKVA 52
L P A GT PGT PP+ GP P Q+ PK
Sbjct: 338 LTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGV 397
Query: 53 GQLRRRRLRQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVP 112
G+ ++ PP + G + L Q P + P P+ + +Q ++P
Sbjct: 398 GKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAP-----GPTKTPVQQPGP--GKIP 450
Query: 113 ADNAGP-RRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPP 155
A AGP + + P +P ++ P PA P P PG K PP
Sbjct: 451 AQQAGPGKTSAQQTGPTKPPSQLPGPAKPP---PQQPGPAKPPP 491
Score = 33.5 bits (75), Expect = 0.13
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 82 SPPPPQLPPELLTNP---SGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPA 138
+P P P+L T P + + +SSP + P +A P++ L K + +PP
Sbjct: 651 APVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPK---KPPPLV 707
Query: 139 SDPDLEPTPPGGLKSPP 155
P L +P K PP
Sbjct: 708 KQPTLHGSPSAKAKQPP 724
Score = 33.5 bits (75), Expect = 0.13
Identities = 49/195 (25%), Positives = 70/195 (35%), Gaps = 36/195 (18%)
Query: 21 GPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRGQR 80
G T P P G P+ QSPK + Q RR L L
Sbjct: 874 GSPTPPGPRPTAGQTVPTPQQSPKPQE------QSRRFSLN--------------LGSIT 913
Query: 81 ESPPP-PQLPPELLTNPS---GSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPA 136
++P P P E +T G++I S S A GP Q G P++ + PA
Sbjct: 914 DAPKSQPTTPQETVTGKLFGFGASIFSQASNLIST-AGQPGPHSQSGPGAPMK---QAPA 969
Query: 137 PASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLP----PHSET 192
P+ P + P ++PP P S +P ++ E L + Q P +E
Sbjct: 970 PSQPPTSQGPPKSTGQAPPAPAKS---IP-VKKETKAPAAEKLEPKAEQAPTVKRTETEK 1025
Query: 193 FLPVLDSGTALTGRP 207
P + +LT P
Sbjct: 1026 KPPPIKDSKSLTAEP 1040
Score = 30.8 bits (68), Expect = 0.85
Identities = 31/128 (24%), Positives = 41/128 (32%), Gaps = 30/128 (23%)
Query: 65 PPADREGEREVLRGQRESPPPPQLPPELLTNPS-----------------------GSAI 101
PPA G + L Q + PP PP P+ G
Sbjct: 331 PPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKA 390
Query: 102 QSSPSRFRRVPADNAGPRRQ------LPKGVPLRPGAEPPAPASDPDLEPT-PPGGLKSP 154
+ P + PA GP + PK + +PG + PA A P P PG K P
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIP 450
Query: 155 PLPCASGQ 162
G+
Sbjct: 451 AQQAGPGK 458
Score = 30.0 bits (66), Expect = 1.5
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 17/77 (22%)
Query: 81 ESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASD 140
+ P QLP +PS S++ + P F R + L A+PP P
Sbjct: 2369 QEKPASQLPSG---SPSVSSLPAKPRPFFRSSS--------------LDISAQPPPPPPP 2411
Query: 141 PDLEPTPPGGLKSPPLP 157
P P PP PPLP
Sbjct: 2412 PPPPPPPPPPPPPPPLP 2428
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 45.4 bits (106), Expect = 3e-05
Identities = 57/205 (27%), Positives = 75/205 (36%), Gaps = 46/205 (22%)
Query: 4 LEAPTATARGTASSRG---CGPGTAPPPSCGR-GPETPSRSQSPKLRRVAKVAGQLRRRR 59
L P+ ++ G +S G P PP G P +PSR+ SP+ ++ + + R
Sbjct: 613 LPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAG 672
Query: 60 LRQRD-----------------PPADREG-----EREVLRGQRESPPPPQLPPELLTNPS 97
+ +D PP+ +G E RG S PPP LPP +PS
Sbjct: 673 IEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPPP-LPPPPPMSPS 731
Query: 98 GSAIQSSPSRFRRVPADNAGP-RRQLP--------------KGVPLRPGAEPPAPASDPD 142
S SP R P A P RQL P GAE P P S P
Sbjct: 732 WSERSVSPLR----PETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPR 787
Query: 143 LEPTPPGGLKSPPLPCASGQGVPGT 167
P PP PP + PG+
Sbjct: 788 APPPPPPPPPPPPRMRSPQPARPGS 812
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 45.1 bits (105), Expect = 4e-05
Identities = 50/179 (27%), Positives = 62/179 (34%), Gaps = 28/179 (15%)
Query: 22 PGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRGQRE 81
P T PPP P PS SP + G L + L PP
Sbjct: 176 PPTPPPPPPPLPPPLPS--SSPIKTPLVSPPGPLTKGNLPVVAPPVP-------CAPPPP 226
Query: 82 SPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPG-------AEP 134
PPPP PP L P S + + + P +P +PL P AEP
Sbjct: 227 PPPPPPTPPPL---PPASVLSDKAVKPQLAPLHLP----PIPPPLPLLPPCGYPGLKAEP 279
Query: 135 PAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLPPHSETF 193
+PA D P PP PPLP + + GV + P LPP S +F
Sbjct: 280 ASPAQDAQEPPAPP-----PPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSF 333
Score = 42.4 bits (98), Expect = 3e-04
Identities = 54/175 (30%), Positives = 64/175 (36%), Gaps = 33/175 (18%)
Query: 19 GCGPGT-APPPSCGR----GPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGER 73
G GPG+ AP P GP P S P+L ++ G R R P
Sbjct: 123 GQGPGSRAPSPRLPNKTISGPLIPPAS--PRLGNTSEAHGAARTAPPRPNVPAPPPP--- 177
Query: 74 EVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAE 133
PPPP LPP L PS SSP + V + LP P P A
Sbjct: 178 ------TPPPPPPPLPPPL---PS-----SSPIKTPLVSPPGPLTKGNLPVVAPPVPCAP 223
Query: 134 PPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLPP 188
PP P P PTP PPLP AS + + L + + P LPP
Sbjct: 224 PPPPPPPP---PTP------PPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPP 269
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 45.1 bits (105), Expect = 4e-05
Identities = 53/182 (29%), Positives = 63/182 (34%), Gaps = 28/182 (15%)
Query: 2 DELEAPTATARGTASSRGCGP---GTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRR 58
+E E ++ +SS G GP G P P C R L R VAG
Sbjct: 670 EEEEEEGSSPGEDSSSLGGGPSRRGPLPCPLCSR----EGACSCLPLERGDAVAGWGGHP 725
Query: 59 RLRQRDPPADREGEREVLRGQRESP--PPPQLPPELLTNPSGSAIQSSPSRFRRVPADNA 116
L PP D R + P PP PPE L G+A P R
Sbjct: 726 ALGCPHPPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMGAAAPQYPGR--------- 776
Query: 117 GPRRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGV 176
GP P P P PP +DP P PP + SP SG PG + +
Sbjct: 777 GP----PPAPP--PPPPPPRAPADPAASPDPPSAVASP----GSGLSSPGPKPGDSGYET 826
Query: 177 ET 178
ET
Sbjct: 827 ET 828
Score = 31.6 bits (70), Expect = 0.50
Identities = 33/106 (31%), Positives = 40/106 (37%), Gaps = 28/106 (26%)
Query: 77 RGQRESPPPPQLPPELLTNPSGS----AIQSSPSRFRRVPADNAG-----------PRRQ 121
RG +PPPP PP +P+ S + +SP P G P
Sbjct: 776 RGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPEGA 835
Query: 122 LP-------KGVPLRPGA--EPP---APASDPDLEPTPPGGLKSPP 155
P +GVP RP A EPP AP PD P P G + P
Sbjct: 836 FPGGGAAEEEGVP-RPRAPPEPPDPGAPRPPPDPGPLPLPGPREKP 880
Score = 30.0 bits (66), Expect = 1.5
Identities = 36/149 (24%), Positives = 47/149 (31%), Gaps = 28/149 (18%)
Query: 23 GTAPPPSCGRGPETPSRSQSPKLRRVAKVAG---QLRRRRLRQRDPPADREGEREVLRGQ 79
GT P + R PET ++P R+ +G + P + + + +
Sbjct: 1111 GTLEPGTERRAPETGGAPRAPGAGRLDLGSGGRAPVGTGTAPGGGPGSGVDAKAGWVDNT 1170
Query: 80 RESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPAS 139
R PPPP LP P A PRR P RP P
Sbjct: 1171 RPQPPPPPLP----------------------PPPEAQPRRLEPAPPRARPEVAPEGEPG 1208
Query: 140 DPDLE---PTPPGGLKSPPLPCASGQGVP 165
PD T G PP P G +P
Sbjct: 1209 APDSRAGGDTALSGDGDPPKPERKGPEMP 1237
Score = 28.9 bits (63), Expect = 3.2
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Query: 134 PPAPASDPDLEPTPPGGLKSPPLPCASGQGVP 165
PP +DP P PP +PP P G G P
Sbjct: 1405 PPEGDTDPSTPPAPP----TPPHPATPGDGFP 1432
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 44.7 bits (104), Expect = 6e-05
Identities = 58/214 (27%), Positives = 82/214 (38%), Gaps = 31/214 (14%)
Query: 21 GPGTAPPPSC----GRG-PETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREV 75
GP +AP PS GRG P +P R Q L A + R R ++ D+E
Sbjct: 978 GPTSAPVPSGSQSGGRGSPVSPRRHQKGLLNCKMPPAEKASRIRAAEKVSRGDQESPDAC 1037
Query: 76 LRGQ-RESPPPPQLP----------PELLTNPSGSAIQSSPSRFRRVPADNAG------- 117
L E+P PPQ P P L +P +I+ + + R+ + A
Sbjct: 1038 LPPTVPEAPAPPQKPLNSQSQKHLAPPPLLSPLLPSIKPTVRKTRQDGSQEAPEAPLSSE 1097
Query: 118 --PRRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLG 175
P PK + P PA+ EP P P P + Q TR R N+
Sbjct: 1098 LEPFHPKPKIRTRKSSRMTPFPATSAAPEPHPSTSTAQPVTPKPTSQ---ATRSRTNRSS 1154
Query: 176 VET---LLLRRPQLPPHSETFLPVLDSGTALTGR 206
V+T ++ P+L P + T PV T+ R
Sbjct: 1155 VKTPEPVVPTAPELQPSTSTDQPVTSEPTSQVTR 1188
Score = 30.8 bits (68), Expect = 0.85
Identities = 31/125 (24%), Positives = 43/125 (34%), Gaps = 18/125 (14%)
Query: 83 PPPPQLPPELLTN-PSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASDP 141
P P+LPP T P S +R R+ + P +P L P P +
Sbjct: 1368 PIAPELPPSTSTEQPVTPEPTSRATRGRKNRSSGKTPETLVPTAPKLEPSTSTDQPVTP- 1426
Query: 142 DLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLPPHSETFLPVLDSGT 201
EPT Q G R + ET++ P+L P + T PV T
Sbjct: 1427 --EPT--------------SQATRGRTNRSSVKTPETVVPTAPELQPSTSTDQPVTPEPT 1470
Query: 202 ALTGR 206
+ R
Sbjct: 1471 SQATR 1475
Score = 29.6 bits (65), Expect = 1.9
Identities = 51/232 (21%), Positives = 76/232 (32%), Gaps = 40/232 (17%)
Query: 2 DELEAPTATARGTASSRGCGPGTAPPPSCGRGPETP--SRSQSPKLRRVAKVAGQLRRRR 59
D+ P T+R T S P + PE P + ++ P A + R+ R
Sbjct: 1339 DQPVTPKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRATRGRKNR 1398
Query: 60 LRQRDPPADREGEREVLRGQRESPPPPQLPPELLTN-PSGSAIQSSPSRFRRVPADNAGP 118
+ P + P P+L P T+ P S +R R + P
Sbjct: 1399 SSGKTP-------------ETLVPTAPKLEPSTSTDQPVTPEPTSQATRGRTNRSSVKTP 1445
Query: 119 RRQLPKGVPLRPGAEP-----PAPASDPDLEPTPPGGLKSPPL----------------P 157
+P L+P P P S T +K+P P
Sbjct: 1446 ETVVPTAPELQPSTSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQP 1505
Query: 158 CASGQGVPGTRRRQNKLGV---ETLLLRRPQLPPHSETFLPVLDSGTALTGR 206
S TR R+N+ V ET++ P+L P + T PV T+ R
Sbjct: 1506 VTSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQPVTPEPTSRATR 1557
Score = 27.7 bits (60), Expect = 7.2
Identities = 41/205 (20%), Positives = 71/205 (34%), Gaps = 20/205 (9%)
Query: 7 PTATARGTASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRD-- 64
PTA ++S + P RG + S ++P+ V A +LR R
Sbjct: 1245 PTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSVKTPE--PVVPTAPELRPSTSTDRPVT 1302
Query: 65 -PPADREGEREVLRGQRESPPP--PQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQ 121
P R ++P P P ++ + + P+ N +
Sbjct: 1303 PKPTSRTTRSRTNMSSVKTPETVVPTAPELQISTSTDQPVTPKPTSRTTRSRTNMSSVKN 1362
Query: 122 LPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLL 181
VP+ P PP+ +++ + P P + + G + R + ETL+
Sbjct: 1363 PESTVPIAPEL-PPSTSTEQPVTPEP------------TSRATRGRKNRSSGKTPETLVP 1409
Query: 182 RRPQLPPHSETFLPVLDSGTALTGR 206
P+L P + T PV T+ R
Sbjct: 1410 TAPKLEPSTSTDQPVTPEPTSQATR 1434
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 44.7 bits (104), Expect = 6e-05
Identities = 54/203 (26%), Positives = 72/203 (35%), Gaps = 28/203 (13%)
Query: 4 LEAPTATARGTASSRGCGPGTAPPPSCGR---GPETPSRSQSPKLRRVAKVAGQLRRRRL 60
L AP AT S GP + PPP C R P P+ + P R + L
Sbjct: 450 LGAPAATPH---LSLPPGPSSPPPPPCPRLLRPPPPPAWLKGPACRAAREDGEILEELFF 506
Query: 61 RQRDPPAD-------REG-------EREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPS 106
PP REG V +PP P P +N + + SSP+
Sbjct: 507 GTEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPTTSSSNSNSGSHSSSPA 566
Query: 107 RFRRVPADNAGPRRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCAS-GQGVP 165
P P L + + P PP+PA +P P P L PP P +S Q
Sbjct: 567 GPVSFP-----PPPYLARSIDPLP--RPPSPAQNPQDPPLVPLTLALPPAPPSSCHQNTS 619
Query: 166 GTRRRQNKLGVETLLLRRPQLPP 188
G+ RR + P++ P
Sbjct: 620 GSFRRPESPRPRVSFPKTPEVGP 642
Score = 42.0 bits (97), Expect = 4e-04
Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 81 ESPPPPQLPPELLTNPSGS-AIQSSPSRFRRVPADNAGPRRQLPKGVPLRPGAEPPAPAS 139
E P +PP L+ PSG + R R ++ G LP G+PL P PP P
Sbjct: 202 EPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCNSEQTG----LPPGLPLPPPPLPPPPPP 257
Query: 140 DPDLEPTPPGGLKSPP 155
P P PG SPP
Sbjct: 258 PPPPPPPLPGLATSPP 273
Score = 35.0 bits (79), Expect = 0.045
Identities = 54/196 (27%), Positives = 64/196 (32%), Gaps = 29/196 (14%)
Query: 15 ASSRGCGPGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPP-------- 66
A S GC P T PP S R SR Q ++ A PP
Sbjct: 344 AESHGCLPATRPPGSDLR----ESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTTTS 399
Query: 67 -ADREGEREVLRGQRESPPPP-----QLPPELLTNPS--GSAIQSSPSRFRRVPADNAGP 118
+ LRG +P P Q P +++ G + SS F PA A P
Sbjct: 400 SSSSSSSNTGLRGVEPNPGIPGADHYQTPALEVSHHGRLGPSAHSSRKPFLGAPA--ATP 457
Query: 119 RRQLPKGVPLRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVET 178
LP G P + PP P P PP LK P A G + G E
Sbjct: 458 HLSLPPG----PSSPPPPPCPRLLRPPPPPAWLKGPACRAARED---GEILEELFFGTEG 510
Query: 179 LLLRRPQLPPHSETFL 194
P PH E FL
Sbjct: 511 PPRPAPPPLPHREGFL 526
Score = 30.0 bits (66), Expect = 1.5
Identities = 47/188 (25%), Positives = 59/188 (31%), Gaps = 39/188 (20%)
Query: 24 TAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVL-RGQRES 82
T PPP P+RS+S L +++ L R R PAD E G
Sbjct: 896 TQPPPPLSL---PPARSESEVLEEISRACETLVERVGRSATDPADPVDTAEPADSGTERL 952
Query: 83 PPPPQLPPEL--LTNPSGSA------IQSSPSRFRRVPADNAGPR---------RQLPKG 125
PP Q E + SGS Q R RR D+ G R ++PK
Sbjct: 953 LPPAQAKEEAGGVAAVSGSCKRRQKEHQKEHRRHRRACKDSVGRRPREGRAKAKAKVPKE 1012
Query: 126 VPLR------------PGAEPPAP------ASDPDLEPTPPGGLKSPPLPCASGQGVPGT 167
R G E P + P P PP P VPG
Sbjct: 1013 KSRRVLGNLDLQSEEIQGREKSRPDLGGASKAKPPTAPAPPSAPAPSAQPTPPSASVPGK 1072
Query: 168 RRRQNKLG 175
+ R+ G
Sbjct: 1073 KAREEAPG 1080
Score = 29.6 bits (65), Expect = 1.9
Identities = 29/106 (27%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Query: 83 PPPPQLP------PELLTNPS-GSAIQSS---PSRFRRVPADNAGPRRQLPKGVPLRPGA 132
PPPP LP P LT P S + P R P + R LP P A
Sbjct: 260 PPPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGSAPPERQEQRHSLPHPYPYPAPA 319
Query: 133 EPPAPASDPDLEPTPPGGLKSPP----LPCASGQGVPGTRRRQNKL 174
P + PPG PP C PG+ R++++
Sbjct: 320 YTAHPPGHRLVPAAPPGPGPRPPGAESHGCLPATRPPGSDLRESRV 365
Score = 29.3 bits (64), Expect = 2.5
Identities = 48/199 (24%), Positives = 72/199 (36%), Gaps = 27/199 (13%)
Query: 4 LEAPTATARGTASSRGCGPGTAPPPSCGRGPET-----PSRSQSPKLRRVAKVAGQLRRR 58
LE RGT ++ PG P GP + P S +P + + + +
Sbjct: 811 LEGQKYCYRGTGAAVSTRPGPLPTTQYSPGPPSGATALPPTSAAPSAQGSPQPSASSSSQ 870
Query: 59 RLRQRDPPA-DREGEREVLRG---QRESPPPPQLPP-----ELLTNPSGSAIQSSPSRFR 109
P A +R E + G + PPP LPP E+L S A ++ R
Sbjct: 871 FSTSGGPWARERRAGEEPVPGPMTPTQPPPPLSLPPARSESEVLEEIS-RACETLVERVG 929
Query: 110 RVPADNAGPRRQLPKGVPLRPGAE---PPAPASDPDLEPTPPGGLKSPPLPCASGQGVPG 166
R D A P + P G E PPA A + GG+ + C Q
Sbjct: 930 RSATDPADP---VDTAEPADSGTERLLPPAQAKE------EAGGVAAVSGSCKRRQKEHQ 980
Query: 167 TRRRQNKLGVETLLLRRPQ 185
R+++ + + RRP+
Sbjct: 981 KEHRRHRRACKDSVGRRPR 999
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 44.7 bits (104), Expect = 6e-05
Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 14/159 (8%)
Query: 19 GCGPGTA------PPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGE 72
G GPG + PPP + + P Q P + + +Q+ PP ++
Sbjct: 48 GPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSS 107
Query: 73 REVL-RGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRP- 130
+ V+ +G +P PP S SA ++P P GP P V P
Sbjct: 108 KPVVAQGPGPAPGVGSAPPA-----SSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPP 162
Query: 131 GAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRR 169
GA PP P S + TPP PP P A PG ++
Sbjct: 163 GAPPPTPPSS-GVPTTPPQAGGPPPPPAAVPGPGPGPKQ 200
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 44.7 bits (104), Expect = 6e-05
Identities = 44/154 (28%), Positives = 59/154 (38%), Gaps = 11/154 (7%)
Query: 18 RGCGPGTAPPPSCGRGPETP-----SRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGE 72
+G PPP G+ PE P ++SQ P R + Q PP + E
Sbjct: 126 QGGNQSQGPPPRPGK-PEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPE 184
Query: 73 REVLRGQRESPPPPQLP--PELLTNPSGSAIQSSPSRFRRV--PADNAGPRRQLPKGVPL 128
+G +S PP P PE G+ Q P R + P G + Q P P
Sbjct: 185 GPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPG 244
Query: 129 RPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQ 162
+P PP + P P PPG + PP P + Q
Sbjct: 245 KPQGPPPQEGNKPQ-RPPPPGRPQGPPPPGGNPQ 277
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/138 (28%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
Query: 24 TAPPPSC--GRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRGQRE 81
T PPP GR P+ ++SQ P R + Q PP + E + +G +
Sbjct: 50 TPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQ 109
Query: 82 SPPPPQLP--PELLTNPSGSAIQSSPSRFRRV--PADNAGPRRQLPKGVPLRPGAEPPAP 137
S PP P PE G+ Q P R + P G + Q P P +P PP
Sbjct: 110 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQG 169
Query: 138 ASDPDLEPTPPGGLKSPP 155
+ P PG + PP
Sbjct: 170 GNQSQGPPPHPGKPEGPP 187
Score = 42.0 bits (97), Expect = 4e-04
Identities = 50/181 (27%), Positives = 66/181 (36%), Gaps = 13/181 (7%)
Query: 18 RGCGPGTAPPPSCGRGPETP-----SRSQSPKLRRVAKVAGQLRRRRLRQRDPP---ADR 69
+G PPP G+ PE P ++SQ P R K GQ + + + PP
Sbjct: 63 QGGNQSQGPPPRPGK-PEGPPPQGGNQSQGPP-PRPGKPEGQPPQGGNQSQGPPPRPGKP 120
Query: 70 EGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRV--PADNAGPRRQLPKGVP 127
EG Q + PPP PE G+ Q P R + P G + Q P P
Sbjct: 121 EGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHP 180
Query: 128 LRPGAEPPAPASDPDLEPTPPGGLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLP 187
+P PP + P PG + PP P Q R G + +PQ P
Sbjct: 181 GKPEGPPPQGGNQSQGPPPRPGKPEGPP-PQGGNQSQGPPPRPGKPEGPPSQGGNKPQGP 239
Query: 188 P 188
P
Sbjct: 240 P 240
Score = 37.4 bits (85), Expect = 0.009
Identities = 42/157 (26%), Positives = 58/157 (36%), Gaps = 17/157 (10%)
Query: 18 RGCGPGTAPPPSCGRGPETP-----SRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGE 72
+G PPP G+ PE P ++SQ P + Q PP + E
Sbjct: 147 QGGNQSQGPPPRPGK-PEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPE 205
Query: 73 REVLRGQRESPPPPQLP--PELLTNPSGSAIQSSPSRFRRV----PADNAGPRRQLPKGV 126
+G +S PP P PE + G+ Q P + P + P+R P G
Sbjct: 206 GPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGR 265
Query: 127 PLRPGAEPPAPASDPDLEPTPPGG-LKSPPLPCASGQ 162
P PP P +P PP G + PP P G+
Sbjct: 266 P----QGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGR 298
Score = 36.6 bits (83), Expect = 0.016
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 70 EGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRV--PADNAGPRRQLPKGVP 127
EG R Q + PPP PE G+ Q P R + P G + Q P P
Sbjct: 37 EGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRP 96
Query: 128 LRPGAEPPAPASDPDLEPTPPGGLKSPP 155
+P +PP + P PG + PP
Sbjct: 97 GKPEGQPPQGGNQSQGPPPRPGKPEGPP 124
Score = 35.4 bits (80), Expect = 0.035
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 14/130 (10%)
Query: 35 ETPSRSQSPKLRRVAKVAGQLRRRRLR-----QRDPPADREGEREVLRG--QRESPPPPQ 87
E S+ +SP + ++G+ RR + QR PP + E +G Q + PPP
Sbjct: 21 EDVSQEESPSV-----ISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRP 75
Query: 88 LPPELLTNPSGSAIQSSPSRFRRVPAD--NAGPRRQLPKGVPLRPGAEPPAPASDPDLEP 145
PE G+ Q P R + G + Q P P +P PP + P
Sbjct: 76 GKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP 135
Query: 146 TPPGGLKSPP 155
PG + PP
Sbjct: 136 PRPGKPEGPP 145
Score = 30.0 bits (66), Expect = 1.5
Identities = 36/139 (25%), Positives = 48/139 (34%), Gaps = 14/139 (10%)
Query: 18 RGCGPGTAPPPSCGRGPETP-----SRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGE 72
+G PPP G+ PE P ++SQ P R + Q PP + E
Sbjct: 168 QGGNQSQGPPPHPGK-PEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 226
Query: 73 REVLRG--QRESPPP----PQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGV 126
+G + + PPP PQ PP N P R + P P++ LP
Sbjct: 227 GPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRP--PPPGRPQGPPPPGGNPQQPLPPPA 284
Query: 127 PLRPGAEPPAPASDPDLEP 145
G PP P P
Sbjct: 285 GKPQGPPPPPQGGRPHRPP 303
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 44.7 bits (104), Expect = 6e-05
Identities = 50/180 (27%), Positives = 64/180 (35%), Gaps = 36/180 (20%)
Query: 1 MDELEAPTATARGTASSRGCGPGTA--PPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRR 58
M P + T SS G ++ PPP GR P +P +K R +
Sbjct: 151 MQRPSLPDLSRPNTTSSTGMKHSSSAPPPPPPGRRANAPP---TPLPMHSSKAPAYNREK 207
Query: 59 RLRQRDPPADREGEREVLRGQRESPP------PPQLPPELLTNPSGSAIQSSPSRFRRVP 112
L PP G+R L RE PP PP P + T PSG ++ P +R+ P
Sbjct: 208 PL----PPTP--GQR--LHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPP 259
Query: 113 ADNAGPRRQLPKGVPLRP---------------GAEPPAP--ASDPDLEPTPPGGLKSPP 155
GP + P P G PP P AS L PP + PP
Sbjct: 260 GVPNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPP 319
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 22/141 (15%)
Query: 22 PGTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGEREVLRGQRE 81
P PP GP +P+ +P+L + R L ++ P +RG
Sbjct: 253 PPYRQPPGVPNGPSSPTNESAPELPQ--------RHNSLHRKTPGP--------VRGLAP 296
Query: 82 SPPPPQLPPELLTNPSGSAIQSSPSRFRRVPAD----NAGPRRQLPKGVPLRP-GAEPPA 136
PPP P LL+N + PSR P G R P P R G+EPP+
Sbjct: 297 -PPPTSASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPS 355
Query: 137 PASDPDLEPTPPGGLKSPPLP 157
P P G PP P
Sbjct: 356 RGKPPPPPSRTPAGPPPPPPP 376
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 44.7 bits (104), Expect = 6e-05
Identities = 54/195 (27%), Positives = 67/195 (34%), Gaps = 46/195 (23%)
Query: 2 DELEAPTATARGTASSRGCGPGTAPPPSCGRGP-------ETPSRSQSPKLRR-----VA 49
+EL + T + P AP P+ E P R SPK+ R A
Sbjct: 497 EELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAA 556
Query: 50 KVAGQLRRRRLRQRDPPADREGEREVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFR 109
V RR + R PA + G R SPP P LPP GS +P
Sbjct: 557 PVEDMARRTK---RPAPARPTMPPPQVSGSRSSPPAPPLPP-------GSGSPGTP---- 602
Query: 110 RVPADNAGPRRQLPKGVPLRPGAEPPAPASDPDLEPTPP-----GGLKSP--PLPCASGQ 162
A PRR + G+ AP P L PTPP +SP P P + G
Sbjct: 603 -----QALPRRLV--------GSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGP 649
Query: 163 GVPGTRRRQNKLGVE 177
P N V+
Sbjct: 650 ASPSPVSLSNPAQVD 664
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,984,424
Number of Sequences: 37866
Number of extensions: 931394
Number of successful extensions: 11328
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 1310
Number of HSP's that attempted gapping in prelim test: 6832
Number of HSP's gapped (non-prelim): 4487
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.