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Search of human proteins with 239753428
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753428 PREDICTED: hypothetical protein [Homo sapiens]
(117 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753428 PREDICTED: hypothetical protein [Homo sapiens] 244 8e-66
gi|239747997 PREDICTED: hypothetical protein [Homo sapiens] 244 8e-66
gi|23510368 homeobox D11 [Homo sapiens] 36 0.006
gi|109452587 family with sequence similarity 98, member B isofor... 36 0.007
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 35 0.010
gi|169166135 PREDICTED: hypothetical protein [Homo sapiens] 35 0.010
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 35 0.010
gi|169165327 PREDICTED: hypothetical protein [Homo sapiens] 35 0.010
gi|150378478 PR domain containing 8 [Homo sapiens] 35 0.010
gi|150378439 PR domain containing 8 [Homo sapiens] 35 0.010
gi|44921615 exocyst complex 84-kDa subunit [Homo sapiens] 35 0.010
gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo ... 35 0.013
gi|239748281 PREDICTED: hypothetical protein [Homo sapiens] 35 0.013
gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo ... 35 0.013
gi|54607124 RNA binding motif protein 15B [Homo sapiens] 35 0.013
gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens] 35 0.013
gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens] 35 0.013
gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo ... 35 0.017
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 35 0.017
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 35 0.017
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 35 0.017
gi|116642878 hypothetical protein LOC400223 [Homo sapiens] 34 0.022
gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo ... 34 0.028
gi|206597556 kelch domain containing 7B [Homo sapiens] 34 0.028
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 33 0.037
gi|239741182 PREDICTED: hypothetical protein XP_002342129 [Homo ... 33 0.037
gi|87252717 hypothetical protein LOC284618 [Homo sapiens] 33 0.037
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens] 33 0.048
gi|153792074 proline rich 12 [Homo sapiens] 33 0.048
gi|71274172 ankyrin repeat domain 56 [Homo sapiens] 33 0.048
>gi|239753428 PREDICTED: hypothetical protein [Homo sapiens]
Length = 117
Score = 244 bits (624), Expect = 8e-66
Identities = 117/117 (100%), Positives = 117/117 (100%)
Query: 1 MPLDPESPTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLS 60
MPLDPESPTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLS
Sbjct: 1 MPLDPESPTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLS 60
Query: 61 LGQAGRRAAGWGGGREGSGSGETPAASAASLLLRQRLRPDPLRLCQAPARTCRVGGA 117
LGQAGRRAAGWGGGREGSGSGETPAASAASLLLRQRLRPDPLRLCQAPARTCRVGGA
Sbjct: 61 LGQAGRRAAGWGGGREGSGSGETPAASAASLLLRQRLRPDPLRLCQAPARTCRVGGA 117
>gi|239747997 PREDICTED: hypothetical protein [Homo sapiens]
Length = 117
Score = 244 bits (624), Expect = 8e-66
Identities = 117/117 (100%), Positives = 117/117 (100%)
Query: 1 MPLDPESPTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLS 60
MPLDPESPTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLS
Sbjct: 1 MPLDPESPTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLS 60
Query: 61 LGQAGRRAAGWGGGREGSGSGETPAASAASLLLRQRLRPDPLRLCQAPARTCRVGGA 117
LGQAGRRAAGWGGGREGSGSGETPAASAASLLLRQRLRPDPLRLCQAPARTCRVGGA
Sbjct: 61 LGQAGRRAAGWGGGREGSGSGETPAASAASLLLRQRLRPDPLRLCQAPARTCRVGGA 117
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 22 GPRPRSPLPPRCQVARGSQEEGRER-GTGGGGWSHRRVLSLGQAGRRAAGWGGGREGSGS 80
GP+P P PP G+ ++G R G GGGG S + G + AA GG
Sbjct: 192 GPQP--PPPPAPPQPEGAADKGDPRTGAGGGGGSPCTKATPGSEPKGAAEGSGGDGEGPP 249
Query: 81 GETPAASAASLLLRQRLR 98
GE A ++S + QR R
Sbjct: 250 GEAGAEKSSSAVAPQRSR 267
Score = 28.9 bits (63), Expect = 0.91
Identities = 35/131 (26%), Positives = 50/131 (38%), Gaps = 19/131 (14%)
Query: 2 PLDPESPTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLSL 61
P D S + ++PS + P S L P Q R + R+ G W +R
Sbjct: 25 PSDFASKPSFLSQPSSCQMTFPYS-SNLAPHVQPVR--EVAFRDYGLERAKWPYRGGGGG 81
Query: 62 GQAGRRAAGWGGGREGSGSG------------ETPAASAASLLLRQRLRPD----PLRLC 105
G AG ++G G G G G+G AA+A +++ L P P L
Sbjct: 82 GSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPAGRRPDVLF 141
Query: 106 QAPARTCRVGG 116
+AP C G
Sbjct: 142 KAPEPVCAAPG 152
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 35.8 bits (81), Expect = 0.007
Identities = 27/64 (42%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 21 RGPRPRS--PLPPRCQVARGSQEEGRERGT-GGGGWSHRRVLSLGQAGRRAAGWGGGREG 77
RG RP P PP + QE G RG GGGG R G GR G GGG G
Sbjct: 308 RGGRPNEIEPPPPEMPPWQKRQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWG 367
Query: 78 SGSG 81
G G
Sbjct: 368 GGGG 371
Score = 30.4 bits (67), Expect = 0.31
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 8/35 (22%)
Query: 47 GTGGGGWSHRRVLSLGQAGRRAAGWGGGREGSGSG 81
G GGGGW G G GWGGG G G
Sbjct: 360 GGGGGGW--------GGGGGGGGGWGGGGGGGRGG 386
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 0.010
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 9/99 (9%)
Query: 8 PTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLSLGQAGRR 67
P R RP+ + +PL R + R GR GG GWSH +G G
Sbjct: 119 PAPRRPRPAPGRRKSLYEAAPLLTREKGGRS----GRRGDRGGSGWSHGHTARVGGTGDS 174
Query: 68 AAGW----GGGREG-SGSGETPAASAASLLLRQRLRPDP 101
+AG G R G SG E P L++ P P
Sbjct: 175 SAGLTTFPGSSRGGFSGREEEPRRERRQPSLQRSTPPAP 213
>gi|169166135 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 35.4 bits (80), Expect = 0.010
Identities = 32/98 (32%), Positives = 37/98 (37%), Gaps = 13/98 (13%)
Query: 8 PTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSH--RRVLSLGQAG 65
P A P A LR P PL G E G R +GGGGWS ++ G+
Sbjct: 14 PGRGSAGPPGAALREPEALPPL--------GGLEHGPLRPSGGGGWSEDDAEDVTAGRCF 65
Query: 66 RRAAGWGGGREGSGSGETPAASAASLLLRQRLRPDPLR 103
A W G G+ PA A L RL P R
Sbjct: 66 LTGAFWTG---VLGTSPAPALGAGPCALGARLPRCPSR 100
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 0.010
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 9/99 (9%)
Query: 8 PTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLSLGQAGRR 67
P R RP+ + +PL R + R GR GG GWSH +G G
Sbjct: 119 PAPRRPRPAPGRRKSLYEAAPLLTREKGGRS----GRRGDRGGSGWSHGHTARVGGTGDS 174
Query: 68 AAGW----GGGREG-SGSGETPAASAASLLLRQRLRPDP 101
+AG G R G SG E P L++ P P
Sbjct: 175 SAGLTTFPGSSRGGFSGREEEPRRERRQPSLQRSTPPAP 213
>gi|169165327 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 35.4 bits (80), Expect = 0.010
Identities = 32/98 (32%), Positives = 37/98 (37%), Gaps = 13/98 (13%)
Query: 8 PTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSH--RRVLSLGQAG 65
P A P A LR P PL G E G R +GGGGWS ++ G+
Sbjct: 14 PGRGSAGPPGAALREPEALPPL--------GGLEHGPLRPSGGGGWSEDDAEDVTAGRCF 65
Query: 66 RRAAGWGGGREGSGSGETPAASAASLLLRQRLRPDPLR 103
A W G G+ PA A L RL P R
Sbjct: 66 LTGAFWTG---VLGTSPAPALGAGPCALGARLPRCPSR 100
>gi|150378478 PR domain containing 8 [Homo sapiens]
Length = 689
Score = 35.4 bits (80), Expect = 0.010
Identities = 33/89 (37%), Positives = 39/89 (43%), Gaps = 19/89 (21%)
Query: 7 SPTAARARPSEA-CLRGPRPRSPLPPRCQ---VARGSQ-----EEGRERGTGGGGWSHRR 57
S T A A P A L PRP PLP R + ARGS + G T GGG +
Sbjct: 422 SSTPAAASPVGAEKLLAPRPGGPLPSRLEGGSPARGSAFTSVPQLGSAGSTSGGGGT--- 478
Query: 58 VLSLGQAGRRAAGWGGGREGSGSGETPAA 86
G AAG GG +G+ S E +A
Sbjct: 479 -------GAGAAGGAGGGQGAASDERKSA 500
>gi|150378439 PR domain containing 8 [Homo sapiens]
Length = 689
Score = 35.4 bits (80), Expect = 0.010
Identities = 33/89 (37%), Positives = 39/89 (43%), Gaps = 19/89 (21%)
Query: 7 SPTAARARPSEA-CLRGPRPRSPLPPRCQ---VARGSQ-----EEGRERGTGGGGWSHRR 57
S T A A P A L PRP PLP R + ARGS + G T GGG +
Sbjct: 422 SSTPAAASPVGAEKLLAPRPGGPLPSRLEGGSPARGSAFTSVPQLGSAGSTSGGGGT--- 478
Query: 58 VLSLGQAGRRAAGWGGGREGSGSGETPAA 86
G AAG GG +G+ S E +A
Sbjct: 479 -------GAGAAGGAGGGQGAASDERKSA 500
>gi|44921615 exocyst complex 84-kDa subunit [Homo sapiens]
Length = 725
Score = 35.4 bits (80), Expect = 0.010
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 29 LPPRCQVARGSQEEGRERGTGG-GGWSHRRVLSLGQAGRRAAGWGGGREGSGSGETPAAS 87
L P A + G E G GG GG H R GQAG + G R+GSG GE
Sbjct: 105 LLPAAAAAGAAAASGGEEGVGGAGGRDHLR----GQAGFFSTPGGASRDGSGPGEEGKQR 160
Query: 88 AASLLLRQ 95
+ LL +
Sbjct: 161 TLTTLLEK 168
>gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo
sapiens]
Length = 201
Score = 35.0 bits (79), Expect = 0.013
Identities = 37/110 (33%), Positives = 41/110 (37%), Gaps = 17/110 (15%)
Query: 1 MPLDPESPTAARARPSEACL---RGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRR 57
+P TA RA A L R PR PL PR RG G GG
Sbjct: 66 LPNTAAEATAKRAPVPSAPLPAARSPRGPQPLSPRSSWVRGM--------PGRGGHQRPL 117
Query: 58 VLSLGQA-----GRRAAGWGGGREGSGSGETPAASAASLLLRQRLRPDPL 102
+LG GR AG GG S P A A +L R+R RP L
Sbjct: 118 FSTLGAGFQPPLGRGGAGRGGAPASLASSARPCA-APALPYRERARPAAL 166
>gi|239748281 PREDICTED: hypothetical protein [Homo sapiens]
Length = 242
Score = 35.0 bits (79), Expect = 0.013
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 20 LRGPRPRSPLPPRCQVARGSQEEGRERGTGGG-----GWSHRRVLSLGQAGRRAAGWGGG 74
LR PR PR + RG Q++ RE+ GG G R+ L G GRR G
Sbjct: 118 LRLPRVVGVPGPRGRRHRGEQQQQREQRGGGARAPGPGPGSRQPLPAGLHGRRKVGSAPD 177
Query: 75 REGSGSGETPA 85
R G G+G A
Sbjct: 178 RHGLGAGSAGA 188
>gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo
sapiens]
Length = 242
Score = 35.0 bits (79), Expect = 0.013
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 20 LRGPRPRSPLPPRCQVARGSQEEGRERGTGGG-----GWSHRRVLSLGQAGRRAAGWGGG 74
LR PR PR + RG Q++ RE+ GG G R+ L G GRR G
Sbjct: 118 LRLPRVVGVPGPRGRRHRGEQQQQREQRGGGARAPGPGPGSRQPLPAGLHGRRKVGSAPD 177
Query: 75 REGSGSGETPA 85
R G G+G A
Sbjct: 178 RHGLGAGSAGA 188
>gi|54607124 RNA binding motif protein 15B [Homo sapiens]
Length = 890
Score = 35.0 bits (79), Expect = 0.013
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 17/73 (23%)
Query: 26 RSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLSLGQAGRRAA--------GWGGGREG 77
+ P+P R + + RG+G GG HR G A RA+ GGGR G
Sbjct: 46 KHPVPARAR--------DKPRGSGSGGGGHRDGRGTGDANHRASSGRSSGSGAGGGGRGG 97
Query: 78 SGSGETPAASAAS 90
SG+ P AS S
Sbjct: 98 KASGD-PGASGMS 109
>gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 35.0 bits (79), Expect = 0.013
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 22 GPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLSLGQAGRRAAGWGGGREGS--- 78
G R RSP P+ GS + G W+ RR RRA W S
Sbjct: 68 GMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRR--------RRARSWSPSSSASSSA 119
Query: 79 --GSGETPAASAASLLLRQRLRPDPLRL 104
G ++P A+AA+L +Q L+ + LRL
Sbjct: 120 SPGRSQSPRAAAAALSQQQSLQ-ERLRL 146
>gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 35.0 bits (79), Expect = 0.013
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 22 GPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLSLGQAGRRAAGWGGGREGS--- 78
G R RSP P+ GS + G W+ RR RRA W S
Sbjct: 68 GMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRR--------RRARSWSPSSSASSSA 119
Query: 79 --GSGETPAASAASLLLRQRLRPDPLRL 104
G ++P A+AA+L +Q L+ + LRL
Sbjct: 120 SPGRSQSPRAAAAALSQQQSLQ-ERLRL 146
>gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo
sapiens]
Length = 368
Score = 34.7 bits (78), Expect = 0.017
Identities = 30/77 (38%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
Query: 23 PRPRSPLPPRCQVARGSQEEGR-------ERGTGGGGWSHRRVL--SLGQAGRRAAGWGG 73
P P PPR Q ARGS+ R G GG R L S +A AA
Sbjct: 286 PAQGPPAPPRPQKARGSRSRRRYLWRWDSAAGVAGGA---RAALSSSAAEAAAAAAAAAA 342
Query: 74 GREGSGSGETPAASAAS 90
R SG +PAASAAS
Sbjct: 343 ARMDFLSGPSPAASAAS 359
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 34.7 bits (78), Expect = 0.017
Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 1 MPLDPESPTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLS 60
MP + + P C+RG + R P PP + RG + G GGGG RR
Sbjct: 1 MPFSFQVQHPSLCTPRVQCIRGSQ-RVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARG 59
Query: 61 LG---QAGRRAAGWGGGREG-----SGSGETPAA 86
G +A + A +G G G SG G P A
Sbjct: 60 GGCWARAYQDARCFGRGEGGDLQVSSGPGAAPPA 93
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 34.7 bits (78), Expect = 0.017
Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 1 MPLDPESPTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLS 60
MP + + P C+RG + R P PP + RG + G GGGG RR
Sbjct: 1 MPFSFQVQHPSLCTPRVQCIRGSQ-RVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARG 59
Query: 61 LG---QAGRRAAGWGGGREG-----SGSGETPAA 86
G +A + A +G G G SG G P A
Sbjct: 60 GGCWARAYQDARCFGRGEGGDLQVSSGPGAAPPA 93
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 34.7 bits (78), Expect = 0.017
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 3 LDPESPTAARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLSLG 62
+D R R A + GP P SP P+ ++ G E G G RR G
Sbjct: 482 IDAADGRRVRPRAPAARVPGPGP-SPSAPQRRLLYGCAGSDSECSAGRLGPLGRR----G 536
Query: 63 QAGRRAAGWGGGREGSGSGETPAASAAS 90
AG G+G + GE+PA S+AS
Sbjct: 537 PAGGVGGGYGESESSASEGESPAFSSAS 564
>gi|116642878 hypothetical protein LOC400223 [Homo sapiens]
Length = 166
Score = 34.3 bits (77), Expect = 0.022
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 42 EGRERGTGGGGWSHRRVLSLGQAGRRAAGWGGGREGSG--------SGETPAASAASLLL 93
EG E G G +HR + G AG AA G R SG +G+ A A++ L
Sbjct: 51 EGPEVGPGTEEPAHRLPVGSGSAGEAAASLGTARVRSGRAECTAKLAGDGHARLASAFLH 110
Query: 94 RQRLRPDPLRLCQ 106
R+ P PL C+
Sbjct: 111 RRAALPPPLGTCR 123
>gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo
sapiens]
Length = 233
Score = 33.9 bits (76), Expect = 0.028
Identities = 39/123 (31%), Positives = 50/123 (40%), Gaps = 22/123 (17%)
Query: 2 PLDPE-SPTAARA------RPSEACLRG------PRPRSPLPPRCQVARGSQ------EE 42
P +P+ SP+ +RA R + C + P P +PLPP R SQ
Sbjct: 86 PSEPQHSPSKSRALCNRGLRSTSRCTQQGLPSVPPSPLTPLPPSPTAPRRSQYPSPGSRV 145
Query: 43 GRERGTGGGGWSHRRVLSLGQAGRRAAGWGGGREG--SGSGETPAASAASLLLRQRLRPD 100
GR GTG G +H RV + RA G G G + S +T AA A R
Sbjct: 146 GRGLGTGRGKLAH-RVAPSKEPPERACGSRGRSTGWAASSPKTHAAGQAPAAARSGRGAG 204
Query: 101 PLR 103
P R
Sbjct: 205 PAR 207
>gi|206597556 kelch domain containing 7B [Homo sapiens]
Length = 594
Score = 33.9 bits (76), Expect = 0.028
Identities = 37/123 (30%), Positives = 47/123 (38%), Gaps = 30/123 (24%)
Query: 1 MPLDPESPTAARARPSEACLRGPRPRSPLPP-----RCQVARGSQEE----------GRE 45
MP P P A R P A R P+P RC++A S++E G
Sbjct: 100 MPRGPAQPPAQRP-PGPAASSSARRSQPVPQLRKRSRCEIAPSSEQEVRPAASGDPQGEA 158
Query: 46 RGTGGGGWSHRRVLSLGQAG--------RRAAGWG---GGREGSGSGETPAASAASLLLR 94
G GG L+ Q +R GWG G R+ S PA +AA LR
Sbjct: 159 PGEGGSPAGRSGALTEKQEEARKLMVFLQRPGGWGVVEGPRKPSSRALEPATAAA---LR 215
Query: 95 QRL 97
+RL
Sbjct: 216 RRL 218
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 33.5 bits (75), Expect = 0.037
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 31 PRCQVARGSQEEGRERGTGGGGWSHRRVLSLGQAGRRAAGWGGGREGSGSGETPAASAAS 90
PR V + +EE + G RR G AGRR GWG G+G+ AS
Sbjct: 12 PRVGVRKREEEEEKSSLGRAAGVESRRRAGEGAAGRRDGGWG---PPGGAGDHQTLQRAS 68
Query: 91 LL 92
LL
Sbjct: 69 LL 70
>gi|239741182 PREDICTED: hypothetical protein XP_002342129 [Homo
sapiens]
Length = 211
Score = 33.5 bits (75), Expect = 0.037
Identities = 31/78 (39%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 38 GSQEEGRERGTGGGGWSHRRVLSLGQAGRRAAGWGGGREGSGSGETPAASAASLLLRQRL 97
G +EG E GT GG S R L G G A G GGGRE G E+P R
Sbjct: 5 GRTKEG-EPGTPGGAGSGGRSLRGGGGG--AGGGGGGREKRGRPESPRRR------RSGE 55
Query: 98 RPDPLRLCQAPARTCRVG 115
R P R + P T R G
Sbjct: 56 RASPARR-RGPGATTRPG 72
>gi|87252717 hypothetical protein LOC284618 [Homo sapiens]
Length = 236
Score = 33.5 bits (75), Expect = 0.037
Identities = 35/101 (34%), Positives = 41/101 (40%), Gaps = 15/101 (14%)
Query: 21 RGPRP----RSPLP---PRCQVARGSQEEGRERG-----TGGGGWSHRRVLSLGQAGRRA 68
RGP P RS LP P Q SQ +G GGGGW SL R+
Sbjct: 23 RGPGPEWTSRSLLPQSGPALQPTPYSQRKGPRETHPDALKGGGGWGWGNTQSLSGECRKG 82
Query: 69 AGWGGGREGSG-SGETPAASAASLLLRQRLRPDPLRLCQAP 108
G G ++G+ S TP AAS L+ P PL P
Sbjct: 83 VGAGEEKDGAAVSLSTPHLLAASAGLQP--APSPLGTAVCP 121
>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 334
Score = 33.1 bits (74), Expect = 0.048
Identities = 36/108 (33%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
Query: 10 AARARPSEACLRGPRPRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLSLGQAGRRAA 69
AA R +E LR PR PPR Q+ RG RG G ++S G GR
Sbjct: 113 AAAVRDAERGLRREGPRRHAPPRKQL-RG------RRGAAG-------LVSAGHLGREPP 158
Query: 70 GWGGGREGSGSGETPAASAASLLLRQRLRPDPLRLCQAPARTCRVGGA 117
GG R P A LLL R P R C R + GA
Sbjct: 159 RGGGPRP---PALVPVPLATPLLLEGRSEPS-TRACAVSGRQAALLGA 202
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 33.1 bits (74), Expect = 0.048
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 21 RGPRPRSPLPPRCQVARG---SQEEGRERGTGG-GGWSHRRVLSLGQAGRRAAGWG-GGR 75
R P PRS P+CQ G + G+ G GG GG ++ G G +A G G GG
Sbjct: 405 RPPPPRSTATPKCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQGLLGPQAYGQGFGGG 464
Query: 76 EGSGSGETPAASAASLLLRQRLRPDPLRLCQA 107
+ + P+ S P L CQ+
Sbjct: 465 QAQDLSKAPSYSGGPPQPPSGPPPPGLATCQS 496
>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
Length = 793
Score = 33.1 bits (74), Expect = 0.048
Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Query: 5 PESPTAARARPSEACLRGPR-PRSPLPPRCQVARGSQEEGRERGTGGGGWSHRRVLSLGQ 63
P P AA A PR R PP+ Q R +E+ E G G
Sbjct: 89 PREPPAAAPSAGGAAPCSPRGARRGEPPQQQPRRRRREKEPEEEPAGAAARAADAACNGL 148
Query: 64 AG---RRAAGWGGGREGSGSGETPAASAAS 90
G RRA G GGG +GS P +AA+
Sbjct: 149 PGSDSRRAPGKGGGSKGSPGQRPPVPAAAA 178
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,411,677
Number of Sequences: 37866
Number of extensions: 376722
Number of successful extensions: 3816
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 348
Number of HSP's that attempted gapping in prelim test: 2983
Number of HSP's gapped (non-prelim): 976
length of query: 117
length of database: 18,247,518
effective HSP length: 87
effective length of query: 30
effective length of database: 14,953,176
effective search space: 448595280
effective search space used: 448595280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.