Guide to the Human Genome
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Name: EXOC8 Sequence: fasta or formatted (725aa) NCBI GI: 44921615
Description:

exocyst complex 84-kDa subunit

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         64           5
 C cysteine            1.7         12           1
 D aspartate           5.0         36           2
 E glutamate          10.3         75           4
 F phenylalanine       3.9         28           2
 G glycine             6.1         44           2
 H histidine           2.2         16           1
 I isoleucine          3.3         24           3
 K lysine              5.2         38           2
 L leucine            11.4         83           2
 M methionine          2.6         19           1
 N asparagine          2.6         19           1
 P proline             3.9         28           3
 Q glutamine           5.2         38           2
 R arginine            6.9         50           3
 S serine              6.1         44           2
 T threonine           4.4         32           2
 V valine              6.8         49           2
 W tryptophan          0.8          6           1
 Y tyrosine            2.8         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   exocyst complex 84-kDa subunit 
KIF20B                0.013   M-phase phosphoprotein 1 
FGD6                  0.012   FYVE, RhoGEF and PH domain containing 6 
RILP                  0.011   Rab interacting lysosomal protein 
CHIC1                 0.010   cysteine-rich hydrophobic domain 1 
GOLGA4                0.010   golgi autoantigen, golgin subfamily a, 4 
CCDC85C               0.009   coiled-coil domain containing 85C 
CDV3                  0.009   carnitine deficiency-associated gene expressed in v...
CDV3                  0.009   carnitine deficiency-associated gene expressed in ven...
POU4F1                0.009   POU domain, class 4, transcription factor 1 
ZIC2                  0.009   zinc finger protein of the cerebellum 2 
SOX4                  0.009   SRY (sex determining region Y)-box 4 
TSC1                  0.009   tuberous sclerosis 1 protein isoform 1 
TSC1                  0.009   tuberous sclerosis 1 protein isoform 4 
TSC1                  0.009   tuberous sclerosis 1 protein isoform 3 
YEATS2                0.008   YEATS domain containing 2 
IVL                   0.008   involucrin 
FAM184B               0.008   hypothetical protein LOC27146 
SCRT1                 0.008   scratch 
LOC100131009          0.007   PREDICTED: hypothetical protein 
LOC100131009          0.007   PREDICTED: hypothetical protein 
MAP4K4                0.007   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.007   mitogen-activated protein kinase kinase kinase kinas...
GLE1                  0.007   GLE1 RNA export mediator homolog isoform 1 
NEFM                  0.007   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.007   neurofilament, medium polypeptide 150kDa isoform 2 ...
EVPL                  0.007   envoplakin 
GLE1                  0.007   GLE1 RNA export mediator homolog isoform 2 
KRT77                 0.007   keratin 77 
ANK3                  0.007   ankyrin 3 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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