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Search of human proteins with 239753362
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753362 PREDICTED: hypothetical protein [Homo sapiens]
(211 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753362 PREDICTED: hypothetical protein [Homo sapiens] 446 e-126
gi|239747930 PREDICTED: hypothetical protein [Homo sapiens] 442 e-125
gi|239741824 PREDICTED: hypothetical protein [Homo sapiens] 442 e-125
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.001
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 40 0.001
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 40 0.001
gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens] 39 0.002
gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo ... 39 0.004
gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo ... 39 0.004
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 39 0.004
gi|18959210 WIRE protein [Homo sapiens] 38 0.007
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 37 0.009
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 37 0.009
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.009
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 37 0.012
gi|65508004 Wilms tumor 1 isoform D [Homo sapiens] 37 0.016
gi|65507908 Wilms tumor 1 isoform C [Homo sapiens] 37 0.016
gi|65507817 Wilms tumor 1 isoform B [Homo sapiens] 37 0.016
gi|65507714 Wilms tumor 1 isoform A [Homo sapiens] 37 0.016
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] 37 0.016
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens] 36 0.021
gi|38176151 Lunapark [Homo sapiens] 36 0.027
gi|117938768 GNAS complex locus alex [Homo sapiens] 35 0.036
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 35 0.036
gi|223941923 OTU domain containing 1 [Homo sapiens] 35 0.047
gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] 35 0.047
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] 35 0.047
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 35 0.047
gi|208022661 hypothetical protein LOC57701 [Homo sapiens] 35 0.047
gi|75677594 forkhead box D4 [Homo sapiens] 35 0.061
>gi|239753362 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 446 bits (1147), Expect = e-126
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60
MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR
Sbjct: 1 MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60
Query: 61 PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120
PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV
Sbjct: 61 PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120
Query: 121 PGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180
PGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ
Sbjct: 121 PGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180
Query: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211
SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF
Sbjct: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211
>gi|239747930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 442 bits (1138), Expect = e-125
Identities = 210/211 (99%), Positives = 210/211 (99%)
Query: 1 MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60
MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR
Sbjct: 1 MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60
Query: 61 PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120
PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV
Sbjct: 61 PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120
Query: 121 PGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180
GRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ
Sbjct: 121 RGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180
Query: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211
SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF
Sbjct: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211
>gi|239741824 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 442 bits (1138), Expect = e-125
Identities = 210/211 (99%), Positives = 210/211 (99%)
Query: 1 MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60
MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR
Sbjct: 1 MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60
Query: 61 PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120
PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV
Sbjct: 61 PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120
Query: 121 PGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180
GRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ
Sbjct: 121 RGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180
Query: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211
SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF
Sbjct: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.4 bits (93), Expect = 0.001
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Query: 54 PHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSA 113
PH + G PPA P + + E+ S + + ++ ++ + G +S+
Sbjct: 2502 PHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSS 2561
Query: 114 GHQRLGVPGRPLSA--------PPPPKPVREGKTPKSTDWAVK--EDECLPKSAPRGQVS 163
+ +P +P A P P + VREG+ P+ T K S+ S
Sbjct: 2562 DSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSS 2621
Query: 164 TQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPR 199
+ + + + S+++S S SP +PGP+
Sbjct: 2622 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQ 2657
Score = 38.9 bits (89), Expect = 0.003
Identities = 47/217 (21%), Positives = 79/217 (36%), Gaps = 31/217 (14%)
Query: 2 SSGSNSSQQLDLLSQLVNTANGRPGTMRSSPE---EPCPHPLGSRSEAYRGCLHKPHQNR 58
SS S+SS S ++++ ++ PE + P P + EA R
Sbjct: 2542 SSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVR---------E 2592
Query: 59 GRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACG-------GPT 111
GRPP P R S+ SS S + + ++ ++ + P
Sbjct: 2593 GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA 2652
Query: 112 SAGHQRLGVPGRPLSAPP-------PPKPVREGKTPKSTDWA-VKEDECLPKSAPRGQVS 163
G Q L P P PP P KP+ + +S ++ V+ P+ +PR Q S
Sbjct: 2653 KPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQS 2712
Query: 164 TQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRR 200
+ + G+ R+ + + + P P P R
Sbjct: 2713 SSSERGS----RRGQRGDSRSPSHKRRRETPSPRPMR 2745
Score = 33.1 bits (74), Expect = 0.18
Identities = 48/214 (22%), Positives = 78/214 (36%), Gaps = 20/214 (9%)
Query: 3 SGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPP 62
S S SS ++D S+L + R G+ ++P P A G P P
Sbjct: 1577 SRSGSSPEVDSKSRL-SPRRSRSGSSPEVKDKPRAAP-----RAQSGSDSSPE-----PK 1625
Query: 63 AGDPHCIPRL-RGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGVP 121
A P +PR R + S G S + + P + A + + P
Sbjct: 1626 APAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTP 1685
Query: 122 GRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPA--------R 173
R S+ P+ R+ + + + A E ++ PR + S + PA R
Sbjct: 1686 PRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRR 1745
Query: 174 LRKARPQSAAASKRGLSLSPPQPGPRRPLFRGHQ 207
+ P++ S+RG S SP G +R R +
Sbjct: 1746 RSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRR 1779
Score = 28.1 bits (61), Expect = 5.7
Identities = 39/173 (22%), Positives = 57/173 (32%), Gaps = 15/173 (8%)
Query: 25 PGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEKFS 84
P RS P SR+ A RG ++R R PA R R T S + S
Sbjct: 589 PARRRSRSRTPTRRRSRSRTPARRG------RSRSRTPA-------RRRSRTRSPVRRRS 635
Query: 85 ECF--ADKIDQMQARLPAAGAACACGGPTSAGHQRLGVPGRPLSAPPPPKPVREGKTPKS 142
A + + ++R PA P G R P R P R G++
Sbjct: 636 RSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSR 695
Query: 143 TDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQ 195
T + R T + G + + +S + +R S S P+
Sbjct: 696 TPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPE 748
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 40.0 bits (92), Expect = 0.001
Identities = 41/150 (27%), Positives = 52/150 (34%), Gaps = 20/150 (13%)
Query: 54 PHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSA 113
P Q R PP D +P G S + +E F + Q R A A P+
Sbjct: 674 PEQARPPPPLEDNLFLPPQGGGKPPSSAQTAEIF-QALQQECMRQLQAPAGSPAPSPSPG 732
Query: 114 GHQRLGVPGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPG--TP 171
G + VP R P PP+P R AP G+ T PG +P
Sbjct: 733 GDDKPQVPPR---VPIPPRPTRP--------------HVQLSPAPPGEEETSQWPGPASP 775
Query: 172 ARLRKARPQSAAASKRGLSLSPPQPGPRRP 201
R+ P S S+ L PP P P
Sbjct: 776 PRVPPREPLSPQGSRTPSPLVPPGSSPLPP 805
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 40.0 bits (92), Expect = 0.001
Identities = 41/150 (27%), Positives = 52/150 (34%), Gaps = 20/150 (13%)
Query: 54 PHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSA 113
P Q R PP D +P G S + +E F + Q R A A P+
Sbjct: 752 PEQARPPPPLEDNLFLPPQGGGKPPSSAQTAEIF-QALQQECMRQLQAPAGSPAPSPSPG 810
Query: 114 GHQRLGVPGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPG--TP 171
G + VP R P PP+P R AP G+ T PG +P
Sbjct: 811 GDDKPQVPPR---VPIPPRPTRP--------------HVQLSPAPPGEEETSQWPGPASP 853
Query: 172 ARLRKARPQSAAASKRGLSLSPPQPGPRRP 201
R+ P S S+ L PP P P
Sbjct: 854 PRVPPREPLSPQGSRTPSPLVPPGSSPLPP 883
>gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]
Length = 1910
Score = 39.3 bits (90), Expect = 0.002
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 21/129 (16%)
Query: 90 KIDQMQARL-PAAGAACACGGPTSAGH--QRLGVPGRPLSAPPPPKPVREGKT-PKSTDW 145
++DQ + ++ P+ A+ +C P++ QR L PPP P + GK K++D
Sbjct: 1337 ELDQKEPQMSPSVAASLSCPVPSTPPELSQRA-----TLDTVPPPPPSKVGKRCRKTSDP 1391
Query: 146 AVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRR----P 201
EC P ++ V T P P R ++GLSLSP P RR P
Sbjct: 1392 RRSIVECQPDASATPGVGTADSPAAPTDSRD--------DQKGLSLSPQSPPERRGYPGP 1443
Query: 202 LFRGHQHGS 210
R H S
Sbjct: 1444 GLRSDWHAS 1452
>gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo
sapiens]
Length = 267
Score = 38.5 bits (88), Expect = 0.004
Identities = 41/132 (31%), Positives = 52/132 (39%), Gaps = 17/132 (12%)
Query: 92 DQMQARLPAAGAACACGGPTSAGHQRLGVPGRPLSAPPPPKP--VREGKTPKSTDWAVKE 149
D + AA A A G + R GVP R PP P R G +P ++
Sbjct: 122 DTLSKGSAAAATAVAAGKHLAVPETRGGVPARRRETANPPGPGRARPGGSPFGHRPLLQP 181
Query: 150 DECL-PKSAPRGQVSTQMQP-----GTPARL--------RKARPQSAAASKRGLSLSPPQ 195
+ P A QV Q +P G+ AR RK PQSA A LS+ +
Sbjct: 182 RQIFAPLQAITNQVRPQQRPEPPPAGSAARSGRRAQRPGRKRSPQSAPAESGELSIDREE 241
Query: 196 PGPRR-PLFRGH 206
GPR+ P GH
Sbjct: 242 GGPRQAPQGAGH 253
>gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo
sapiens]
Length = 248
Score = 38.5 bits (88), Expect = 0.004
Identities = 41/132 (31%), Positives = 52/132 (39%), Gaps = 17/132 (12%)
Query: 92 DQMQARLPAAGAACACGGPTSAGHQRLGVPGRPLSAPPPPKP--VREGKTPKSTDWAVKE 149
D + AA A A G + R GVP R PP P R G +P ++
Sbjct: 103 DTLSKGSAAAATAVAAGKHLAVPETRGGVPARRRETANPPGPGRARPGGSPFGHRPLLQP 162
Query: 150 DECL-PKSAPRGQVSTQMQP-----GTPARL--------RKARPQSAAASKRGLSLSPPQ 195
+ P A QV Q +P G+ AR RK PQSA A LS+ +
Sbjct: 163 RQIFAPLQAITNQVRPQQRPEPPPAGSAARSGRRAQRPGRKRSPQSAPAESGELSIDREE 222
Query: 196 PGPRR-PLFRGH 206
GPR+ P GH
Sbjct: 223 GGPRQAPQGAGH 234
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 38.5 bits (88), Expect = 0.004
Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 20/107 (18%)
Query: 103 AACACGGPTSAGHQRLGVPGRPLSAPPPPKPVREGKTP---KSTDWAVKEDECLP----- 154
AA GP S PG L+ P PP+P R+G TP ++ WA + LP
Sbjct: 452 AAPPRSGPQSPAPAAPAQPGATLAPPTPPRP-RDGGTPRHSRALSWAARAARPLPLFLGR 510
Query: 155 KSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRRP 201
PR V QP + + RP G SP P PR P
Sbjct: 511 APPPRPAVE---QPPPKVYVTRVRP--------GQRASPRAPAPRAP 546
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 37.7 bits (86), Expect = 0.007
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 121 PGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180
PGR +APP P P+ K P +E P R + P P P
Sbjct: 182 PGRRANAPPTPLPMHSSKAPAYN----REKPLPPTPGQRLHPGREGPPAPPPVKPPPSPV 237
Query: 181 SAAASKRGLSLSPPQPGPRRP 201
+ G SL+PP P R+P
Sbjct: 238 NIRTGPSGQSLAPPPPPYRQP 258
Score = 37.4 bits (85), Expect = 0.009
Identities = 48/196 (24%), Positives = 65/196 (33%), Gaps = 43/196 (21%)
Query: 23 GRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEK 82
GR G P +P P P+ R+ L P PP P +P G + + E
Sbjct: 220 GREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPP-----PPYRQPPGVPN--GPSSPTNES 272
Query: 83 FSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLG---------VPGRPLSAPPPPKP 133
E + + + + P A PTSA L P R + PPPP
Sbjct: 273 APE-LPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAPPPPPPV 331
Query: 134 VREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSP 193
+R G + AP P P R+ + P S S +P
Sbjct: 332 IRNG----------------ARDAP--------PPPPPYRMHGSEPPSRGKPPPPPSRTP 367
Query: 194 --PQPGPRRPLFRGHQ 207
P P P PL GH+
Sbjct: 368 AGPPPPPPPPLRNGHR 383
Score = 31.6 bits (70), Expect = 0.51
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 108 GGPTSAGHQRLGVPGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQ 167
G AG L +P +AP PP G+ TD LP+ PR Q +
Sbjct: 103 GSENLAGKPALQIPSSRAAAPRPPVSAASGRPQDDTD---SSRASLPE-LPRMQ-----R 153
Query: 168 PGTPARLRKARPQSAAASKRGLSLSPPQPGPRR 200
P P L + S+ K S PP P RR
Sbjct: 154 PSLP-DLSRPNTTSSTGMKHSSSAPPPPPPGRR 185
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 37.4 bits (85), Expect = 0.009
Identities = 44/166 (26%), Positives = 60/166 (36%), Gaps = 19/166 (11%)
Query: 42 SRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAA 101
SR EA RGC H+ Q R R AG+ P S ++ + + R P
Sbjct: 344 SRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRP-- 401
Query: 102 GAACACGGPTSAGHQRLGVPGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQ 161
C P+ AG R G P AP PP G+ ++ E P++ G
Sbjct: 402 ----PCARPSGAGPAREGPAAWPGGAPTPPHARPTGRR--------QDPEPGPRAPRGGP 449
Query: 162 VSTQMQPGTPARL-----RKARPQSAAASKRGLSLSPPQPGPRRPL 202
S+ G+ A +R + AA RG S RPL
Sbjct: 450 ASSGWHAGSAAGRGWDPGGGSRARRRAARGRGCLRSARSSPHARPL 495
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 37.4 bits (85), Expect = 0.009
Identities = 44/166 (26%), Positives = 60/166 (36%), Gaps = 19/166 (11%)
Query: 42 SRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAA 101
SR EA RGC H+ Q R R AG+ P S ++ + + R P
Sbjct: 344 SRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRP-- 401
Query: 102 GAACACGGPTSAGHQRLGVPGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQ 161
C P+ AG R G P AP PP G+ ++ E P++ G
Sbjct: 402 ----PCARPSGAGPAREGPAAWPGGAPTPPHARPTGRR--------QDPEPGPRAPRGGP 449
Query: 162 VSTQMQPGTPARL-----RKARPQSAAASKRGLSLSPPQPGPRRPL 202
S+ G+ A +R + AA RG S RPL
Sbjct: 450 ASSGWHAGSAAGRGWDPGGGSRARRRAARGRGCLRSARSSPHARPL 495
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 37.4 bits (85), Expect = 0.009
Identities = 52/188 (27%), Positives = 69/188 (36%), Gaps = 31/188 (16%)
Query: 23 GRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEK 82
G P T ++P P P G G P + PPA P P L+G + K
Sbjct: 1239 GAPTTPAATP----PSPKG-------GPATPPPKGAPTPPAATP---PSLKGGLATPPHK 1284
Query: 83 FSECFADKIDQMQARLPAAGAACAC--GGPTSAGHQRLGVPGRPLSAPPPPKPVREGKTP 140
A + P G A + G PT G P + PP P TP
Sbjct: 1285 G----APNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTP 1340
Query: 141 KSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAAS-KRGLSLSPPQP--G 197
S K LP + P S++ P TP+ P +A S K G +++PP P G
Sbjct: 1341 PSP----KGTPTLPATTP----SSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRG 1392
Query: 198 PRRPLFRG 205
P P +G
Sbjct: 1393 PAIPSPKG 1400
Score = 37.0 bits (84), Expect = 0.012
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 99 PAAGAACACGGPTSAGHQRLGVPGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAP 158
PAA GGP + + G P P + PP PK +PK A P S P
Sbjct: 1060 PAATLPSPKGGPATPSLK--GAPTPPAATPPSPKGGPATPSPKG---APMPPAATPPS-P 1113
Query: 159 RGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRRP 201
+G ++T G P P + K GL+ PP+ P P
Sbjct: 1114 KGGLATPPHKGAPTTPAATPP----SPKGGLATPPPKGAPTTP 1152
Score = 35.4 bits (80), Expect = 0.036
Identities = 45/190 (23%), Positives = 66/190 (34%), Gaps = 12/190 (6%)
Query: 26 GTMRSSPEEPCPHPLGSRSEAYRGC-LHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEKFS 84
G + + P + P+P + +G P + PPA P G+ G
Sbjct: 1276 GGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTP 1335
Query: 85 ECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGVP--------GRPLSAPPPPKPVRE 136
+ LPA + GGPT+ + P G P PP PK
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSK-GGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPA 1394
Query: 137 GKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAAS-KRGLSLSPPQ 195
+PK + PK AP V T+ TP++ P S K+ + S P+
Sbjct: 1395 IPSPKGDPTSPAVIPLSPKKAPATPV-TREGAATPSKGDLTPPAVTPVSLKKAPATSAPK 1453
Query: 196 PGPRRPLFRG 205
GP P +G
Sbjct: 1454 GGPATPSSKG 1463
Score = 32.3 bits (72), Expect = 0.30
Identities = 43/182 (23%), Positives = 60/182 (32%), Gaps = 29/182 (15%)
Query: 25 PGTMRSSPEEPCPH-----PLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSS 79
P + + P P P P + G PH+ PA P P +G +
Sbjct: 1087 PPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATP---PSPKGGLATP 1143
Query: 80 GEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGVPGRPLSAPPPPKPVREGKT 139
K + PAA GG + + G P P + PP PK +
Sbjct: 1144 PPKGAPT-----------TPAATPPSPKGGLATPPPK--GAPTTPAATPPSPKGGLATPS 1190
Query: 140 PKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPR 199
PK A P S P+G ++T G P P + K GL+ P+ P
Sbjct: 1191 PKG---APTTPAATPPS-PKGGLATPSPKGAPTTPAATPP----SPKGGLATPSPKGAPT 1242
Query: 200 RP 201
P
Sbjct: 1243 TP 1244
Score = 30.8 bits (68), Expect = 0.88
Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 119 GVPGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKAR 178
G P P + PP PK G S WA P S P+G +T G P
Sbjct: 938 GAPTPPAATPPSPK---GGPATPSPKWAPTPPAATPPS-PKGGPATPSPKGAP-----TP 988
Query: 179 PQSAAASKRGLSLSPPQPGPRRP 201
P + S +G +P G P
Sbjct: 989 PAATPPSPKGGPATPSPKGAPTP 1011
Score = 30.8 bits (68), Expect = 0.88
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 17/118 (14%)
Query: 99 PAAGAACACGGPTSAGHQRLGVPGRPLSAPPPPK-------PVREGKTPKSTDWAVKEDE 151
PAA GG + + G P P + PP PK P TP +T + K
Sbjct: 1198 PAATPPSPKGGLATPSPK--GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGP 1255
Query: 152 CL--PKSAPRGQVST--QMQPGTPARLRKARPQSAAAS----KRGLSLSPPQPGPRRP 201
PK AP +T ++ G K P A + K G + SPP+ P P
Sbjct: 1256 ATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPP 1313
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 37.0 bits (84), Expect = 0.012
Identities = 51/194 (26%), Positives = 72/194 (37%), Gaps = 38/194 (19%)
Query: 23 GRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEK 82
G P + P+ P P P + +G +KP +G PP G P P GS S
Sbjct: 244 GPPPQGGNQPQGPPPPPGKPQGPPPQGG-NKP---QGPPPPGKPQGPPPQGGSKSRS--- 296
Query: 83 FSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGVP---GRPLSAPP--------PP 131
+R P G P G+Q G P G+P PP PP
Sbjct: 297 -------------SRSPPGKPQ---GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 340
Query: 132 KPVR-EGKTPK--STDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRG 188
P + +G P+ S + + P+ P+ + + P PA +PQ+ A +
Sbjct: 341 PPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQ 400
Query: 189 LSLSPPQPG-PRRP 201
PPQ G P RP
Sbjct: 401 GPPRPPQGGRPSRP 414
>gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]
Length = 517
Score = 36.6 bits (83), Expect = 0.016
Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 36/153 (23%)
Query: 32 PEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAG-------DPHCIPRLRG--STCSSGEK 82
PE H L S GCL +P Q R P G RL+G S +SG +
Sbjct: 10 PEPASQHTLRSGP----GCLQQPEQQGVRDPGGIWAKLGAAEASAERLQGRRSRGASGSE 65
Query: 83 FSECFADKIDQMQARLPAA-----GAACAC--------------GGPTSAGHQRLGVPGR 123
+ +D D + A LPA G CA P ++ + LG P
Sbjct: 66 PQQMGSDVRD-LNALLPAVPSLGGGGGCALPVSGAAQWAPVLDFAPPGASAYGSLGGPAP 124
Query: 124 PLSAPPPPKPVREGKTPKSTDWA---VKEDECL 153
P + PPPP P + W E++CL
Sbjct: 125 PPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCL 157
>gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]
Length = 500
Score = 36.6 bits (83), Expect = 0.016
Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 36/153 (23%)
Query: 32 PEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAG-------DPHCIPRLRG--STCSSGEK 82
PE H L S GCL +P Q R P G RL+G S +SG +
Sbjct: 10 PEPASQHTLRSGP----GCLQQPEQQGVRDPGGIWAKLGAAEASAERLQGRRSRGASGSE 65
Query: 83 FSECFADKIDQMQARLPAA-----GAACAC--------------GGPTSAGHQRLGVPGR 123
+ +D D + A LPA G CA P ++ + LG P
Sbjct: 66 PQQMGSDVRD-LNALLPAVPSLGGGGGCALPVSGAAQWAPVLDFAPPGASAYGSLGGPAP 124
Query: 124 PLSAPPPPKPVREGKTPKSTDWA---VKEDECL 153
P + PPPP P + W E++CL
Sbjct: 125 PPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCL 157
>gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]
Length = 514
Score = 36.6 bits (83), Expect = 0.016
Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 36/153 (23%)
Query: 32 PEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAG-------DPHCIPRLRG--STCSSGEK 82
PE H L S GCL +P Q R P G RL+G S +SG +
Sbjct: 10 PEPASQHTLRSGP----GCLQQPEQQGVRDPGGIWAKLGAAEASAERLQGRRSRGASGSE 65
Query: 83 FSECFADKIDQMQARLPAA-----GAACAC--------------GGPTSAGHQRLGVPGR 123
+ +D D + A LPA G CA P ++ + LG P
Sbjct: 66 PQQMGSDVRD-LNALLPAVPSLGGGGGCALPVSGAAQWAPVLDFAPPGASAYGSLGGPAP 124
Query: 124 PLSAPPPPKPVREGKTPKSTDWA---VKEDECL 153
P + PPPP P + W E++CL
Sbjct: 125 PPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCL 157
>gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]
Length = 497
Score = 36.6 bits (83), Expect = 0.016
Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 36/153 (23%)
Query: 32 PEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAG-------DPHCIPRLRG--STCSSGEK 82
PE H L S GCL +P Q R P G RL+G S +SG +
Sbjct: 10 PEPASQHTLRSGP----GCLQQPEQQGVRDPGGIWAKLGAAEASAERLQGRRSRGASGSE 65
Query: 83 FSECFADKIDQMQARLPAA-----GAACAC--------------GGPTSAGHQRLGVPGR 123
+ +D D + A LPA G CA P ++ + LG P
Sbjct: 66 PQQMGSDVRD-LNALLPAVPSLGGGGGCALPVSGAAQWAPVLDFAPPGASAYGSLGGPAP 124
Query: 124 PLSAPPPPKPVREGKTPKSTDWA---VKEDECL 153
P + PPPP P + W E++CL
Sbjct: 125 PPAPPPPPPPPPHSFIKQEPSWGGAEPHEEQCL 157
>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 36.6 bits (83), Expect = 0.016
Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 22/124 (17%)
Query: 97 RLPAAGAACACGGPTSAGHQ---RLGVPG---RPLSAPPPPKPVREGKTPKSTDWAVKED 150
R P A AA A GG T G Q R GV G SA PP P + S+ +
Sbjct: 2 RAPPATAATAAGGATGGGPQAARRSGVQGGQRNSTSARAPPPPPLAPSSSSSSGSSGSSG 61
Query: 151 ECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSL-------------SPPQPG 197
SA + + + + G+ AR R A G +L SPPQPG
Sbjct: 62 GGGSGSAGQPTLGSMLAVGSAARRASERAGGRAG---GTALRAREPPPPLLPPPSPPQPG 118
Query: 198 PRRP 201
P+ P
Sbjct: 119 PKGP 122
>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 36.2 bits (82), Expect = 0.021
Identities = 46/176 (26%), Positives = 60/176 (34%), Gaps = 35/176 (19%)
Query: 20 TANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSS 79
T RPGT+R+ P P +R + L +P R A PH L GS
Sbjct: 57 TLRPRPGTLRAPGNAESPAPRRARPD-----LGRPWATRS---AASPHSKMWL-GSHLRG 107
Query: 80 GEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGVPG-------RPLSAPPPPK 132
GE + D LPA P + L +P PLS P PP+
Sbjct: 108 GEMSGDPHTD--------LPAH--------PAQTTNPELELPADPAQPDPAPLSRPAPPR 151
Query: 133 PVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRG 188
P + + A P++ P G+ Q P R A AS RG
Sbjct: 152 PAHQSPAEEGPRGAAGGG---PRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRG 204
>gi|38176151 Lunapark [Homo sapiens]
Length = 428
Score = 35.8 bits (81), Expect = 0.027
Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 19/110 (17%)
Query: 99 PAAGAACACGGP------TSAGHQRLGVPGRPLSAPPPPKPVREGKTPKSTDWAVKEDEC 152
P+AGAA T+A P P PPP PV G PK +
Sbjct: 152 PSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGP-PKDS--------- 201
Query: 153 LPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRRPL 202
SAP G + P + + S A S G+ L PP P RP+
Sbjct: 202 ---SAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPI 248
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 35.4 bits (80), Expect = 0.036
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 116 QRLGVPGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARL- 174
Q + +PGRPL PPP + +R G+ P S +++ + LP P + PG P
Sbjct: 400 QPIQMPGRPLRLPPPLRLLRPGQ-PMSPQ--LRQTQGLPLPQP------LLPPGQPKSAG 450
Query: 175 RKARPQSAAASKRGLSLSPPQPGPRRPL 202
R +P R +S PP P R P+
Sbjct: 451 RPLQPLPPGPDARSIS-DPPAPRSRLPI 477
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 35.4 bits (80), Expect = 0.036
Identities = 32/124 (25%), Positives = 44/124 (35%), Gaps = 2/124 (1%)
Query: 88 ADKIDQMQARLPAAGAACACGGPTSAGHQRLGVPGRPLSAPPPPKPVREGKT-PKSTDWA 146
A K + R + G A G +AG + + V G PLS P P+ T
Sbjct: 353 AAKCSSCRVRTASEGDGGAAAGAAAAGARPVSVAGSPLSPGPVRAPLSRSHTLSGGCGGR 412
Query: 147 VKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQS-AAASKRGLSLSPPQPGPRRPLFRG 205
+ LP + P + P S +++S G PP PGP PL
Sbjct: 413 GSKVALLPAGGALQHSRSMSMPVAHSPPAATSPGSLSSSSGHGSGSYPPPPGPHPPLPHP 472
Query: 206 HQHG 209
HG
Sbjct: 473 LHHG 476
Score = 31.2 bits (69), Expect = 0.67
Identities = 40/172 (23%), Positives = 58/172 (33%), Gaps = 50/172 (29%)
Query: 1 MSSGSNSSQQLDLLSQLVNTANGRPGTMR----------------SSPEEPCP-----HP 39
++S ++SS L S + +G PGT SSP+ P P HP
Sbjct: 939 LASAASSSSLLSASSPASSLGSGTPGTSSDSRQRSPLSDYMNLDFSSPKSPKPGAPSGHP 998
Query: 40 LGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLP 99
+GS P+ P+ P + + GE + RLP
Sbjct: 999 VGSLDGLLSPEASSPYPPLPPRPSASPSSSLQPPPPPPAPGELY-------------RLP 1045
Query: 100 AAGAACACGGPTSAG-------------HQRLGV---PGRPLSAPPPPKPVR 135
A A GP +A GV P +P++APP P+ R
Sbjct: 1046 PASAVATAQGPGAASSLSSDTGDNGDYTEMAFGVAATPPQPIAAPPKPEAAR 1097
Score = 27.7 bits (60), Expect = 7.4
Identities = 42/193 (21%), Positives = 65/193 (33%), Gaps = 24/193 (12%)
Query: 16 QLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGS 75
+ +N G PG S P P S S G P G+
Sbjct: 918 EYINIDFGEPGARLSPPAPPLLASAASSSSLLSASSPASSLGSGTP------------GT 965
Query: 76 TCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGVPGRPLSAPPPPKPVR 135
+ S ++ +D + P GA G P + G+ S+P PP P R
Sbjct: 966 SSDSRQRSPLSDYMNLDFSSPKSPKPGAPS--GHPVGSLD---GLLSPEASSPYPPLPPR 1020
Query: 136 EGKTPKSTDWAVKEDEC---LPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKR--GLS 190
+P S+ L + P V+T PG + L + ++ G++
Sbjct: 1021 PSASPSSSLQPPPPPPAPGELYRLPPASAVATAQGPGAASSLSSDTGDNGDYTEMAFGVA 1080
Query: 191 LSPPQP--GPRRP 201
+PPQP P +P
Sbjct: 1081 ATPPQPIAAPPKP 1093
>gi|223941923 OTU domain containing 1 [Homo sapiens]
Length = 481
Score = 35.0 bits (79), Expect = 0.047
Identities = 34/102 (33%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 99 PAAGAACACGGPTSAGHQRLGVPGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAP 158
P GAA + P G L P AP P P R G S+ W ++E P
Sbjct: 131 PVPGAAGSAAAPR--GRCLLLAP-----APAAPVPPRRG----SSAWLLEELLRPDCPEP 179
Query: 159 RGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSP--PQPGP 198
G +T+ P RL + R AAA RG + +P P PGP
Sbjct: 180 AGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGP 221
Score = 31.2 bits (69), Expect = 0.67
Identities = 27/96 (28%), Positives = 33/96 (34%), Gaps = 14/96 (14%)
Query: 115 HQRLGVPGRPLSAPPPPK---PVREGKTPKSTDWAVKEDE---CLPKSAPRGQVSTQMQP 168
H G PG +AP PP P + P A E E C P +A + + +
Sbjct: 10 HYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPA 69
Query: 169 GTPARLRK--------ARPQSAAASKRGLSLSPPQP 196
A P SAAA G S PP P
Sbjct: 70 AKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLP 105
>gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]
Length = 374
Score = 35.0 bits (79), Expect = 0.047
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 14/109 (12%)
Query: 97 RLPAAGAACACGGPTSAGHQRLGVPGRPLS----APPPPKPVREGKTPKSTDWAVKEDEC 152
+ P AG A T+ G VP P+ PPP PV +G+ + + +
Sbjct: 50 KTPEAGLAGRPSPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGED------VLPDLDL 103
Query: 153 LPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRRP 201
LP P V + PA + S A L LSPP P P+ P
Sbjct: 104 LPPPPPPPPVLLPSEEEAPAPMGA----SLIADLEQLHLSPPPPPPQAP 148
>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
Length = 373
Score = 35.0 bits (79), Expect = 0.047
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 14/109 (12%)
Query: 97 RLPAAGAACACGGPTSAGHQRLGVPGRPLS----APPPPKPVREGKTPKSTDWAVKEDEC 152
+ P AG A T+ G VP P+ PPP PV +G+ + + +
Sbjct: 50 KTPEAGLAGRPSPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGED------VLPDLDL 103
Query: 153 LPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRRP 201
LP P V + PA + S A L LSPP P P+ P
Sbjct: 104 LPPPPPPPPVLLPSEEEAPAPMGA----SLIADLEQLHLSPPPPPPQAP 148
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 35.0 bits (79), Expect = 0.047
Identities = 42/173 (24%), Positives = 67/173 (38%), Gaps = 18/173 (10%)
Query: 56 QNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGH 115
+ RGR C+P S S E+ + F D + L +A + P G
Sbjct: 95 RGRGRGWGPSRGCVPEEESSDGESDEEEFQGFHSDEDVAPSSLRSALRSQRGRAPRGRGR 154
Query: 116 QRLGVPGRPLS----APPPPKPVREGKTPKSTDWAVKE-DECLPKS-APRGQVSTQMQPG 169
+ P P AP PPK + + T+ V+ E L ++ AP+ S +P
Sbjct: 155 KHKTTPLPPPRLADVAPTPPKTPARKRGEEGTERMVQALTELLRRAQAPQAPRSRACEPS 214
Query: 170 TPARLRKARP-----------QSAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211
TP R R P Q+ ++ +++ P+P P + HQ GS+
Sbjct: 215 TPRRSRGRPPGRPAGPCRRKQQAVVVAEAAVTIPKPEPPPPVVPVK-HQTGSW 266
Score = 27.7 bits (60), Expect = 7.4
Identities = 22/77 (28%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 124 PLSAPPPPKPVREGKTPKSTDWAVKE--DECLPKSAPRGQVSTQMQPGTPARLRKARPQS 181
P PPPP PV P +E +E P P + + G P R +
Sbjct: 426 PPLCPPPPPPVSPPPLPSPPPPPAQEEQEESPPPVVP---ATCSRKRGRPPLTPSQRAER 482
Query: 182 AAASKRGLSLSPPQPGP 198
AA SPP P P
Sbjct: 483 EAARAGPEGTSPPTPTP 499
>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
Length = 1334
Score = 35.0 bits (79), Expect = 0.047
Identities = 44/149 (29%), Positives = 56/149 (37%), Gaps = 25/149 (16%)
Query: 63 AGDPHCIPR---LRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLG 119
AGDP+ P L G+ + D +QA L AGAA GP + H G
Sbjct: 305 AGDPNEAPSPDTLLGALARRQLNLGQLLEDTESYLQAFL--AGAA----GPLNGDHPGPG 358
Query: 120 VPGRPLSAPPP-------PKPVREGKTPKSTD---WAVKEDECLPKSAPRGQVSTQMQPG 169
P APP PK G TP++ A E + P +S M G
Sbjct: 359 QSSSPDQAPPQLSKSKGLPKSAWGGGTPEAHRPGFGATSEGQ-----GPLPFLSMFMGAG 413
Query: 170 -TPARLRKARPQSAAASKRGLSLSPPQPG 197
P R P S++ K L + PP PG
Sbjct: 414 DAPLGSRPGHPHSSSQVKSKLQIGPPSPG 442
>gi|75677594 forkhead box D4 [Homo sapiens]
Length = 439
Score = 34.7 bits (78), Expect = 0.061
Identities = 39/153 (25%), Positives = 52/153 (33%), Gaps = 24/153 (15%)
Query: 50 CLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGG 109
C K + GRP G+ + +G F + + Q P GA
Sbjct: 161 CFVKIPREPGRPGKGNYWSLDPASQDMFDNGS-----FLRRRKRFQRHQPTPGAHLPHPF 215
Query: 110 PTSAGHQRLGVP--GRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQ 167
P A H L P G L AP PP+PV P + P + +
Sbjct: 216 PLPAAHAALHNPRPGPLLGAPAPPQPV---------------PGAYPNTGPGRRPYALLH 260
Query: 168 PGTPARLRKARPQSAAASKR--GLSLSPPQPGP 198
P P L + P A A K+ G L+ P P P
Sbjct: 261 PHPPRYLLLSAPAYAGAPKKAEGADLATPAPFP 293
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,166,187
Number of Sequences: 37866
Number of extensions: 771127
Number of successful extensions: 4894
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 485
Number of HSP's that attempted gapping in prelim test: 4238
Number of HSP's gapped (non-prelim): 1129
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.