Search of human proteins with 239753290

Search of human proteins with 239753290

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753290 PREDICTED: hypothetical protein XP_002345611 [Homo
sapiens]
         (144 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753290 PREDICTED: hypothetical protein XP_002345611 [Homo ...   304   2e-83
gi|239747859 PREDICTED: hypothetical protein [Homo sapiens]           210   3e-55
gi|239741741 PREDICTED: hypothetical protein XP_002342309 [Homo ...   210   3e-55
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]            39   0.002
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ...    39   0.002
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ...    39   0.002
gi|7705555 iroquois homeobox 4 [Homo sapiens]                          38   0.003
gi|239751178 PREDICTED: basic helix-loop-helix family, member a9...    36   0.010
gi|239745666 PREDICTED: basic helix-loop-helix family, member a9...    36   0.010
gi|169217823 PREDICTED: similar to IQ motif and SEC7 domain-cont...    35   0.017
gi|169214926 PREDICTED: similar to IQ motif and SEC7 domain-cont...    35   0.017
gi|113431383 PREDICTED: hypothetical protein [Homo sapiens]            35   0.017
gi|113428915 PREDICTED: similar to IQ motif and SEC7 domain-cont...    35   0.017
gi|239744532 PREDICTED: hypothetical protein XP_002343185 [Homo ...    35   0.017
gi|8923842 forkhead box J2 [Homo sapiens]                              35   0.017
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]       35   0.022
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho...    35   0.022
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho...    35   0.022
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho...    35   0.022
gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho...    35   0.022
gi|71274172 ankyrin repeat domain 56 [Homo sapiens]                    35   0.022
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a...    35   0.028
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b...    35   0.028
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     35   0.028
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     35   0.028
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]    35   0.028
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]    35   0.028
gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo sa...    34   0.037
gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo sa...    34   0.037
gi|130502140 NEZHA isoform 2 [Homo sapiens]                            34   0.037

>gi|239753290 PREDICTED: hypothetical protein XP_002345611 [Homo
           sapiens]
          Length = 144

 Score =  304 bits (778), Expect = 2e-83
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MLHPQERTWAVASLIPGTGCSVPRSPVCSLESSCRHWSCSSHSTCSTSHSRGRAPVCNAR 60
           MLHPQERTWAVASLIPGTGCSVPRSPVCSLESSCRHWSCSSHSTCSTSHSRGRAPVCNAR
Sbjct: 1   MLHPQERTWAVASLIPGTGCSVPRSPVCSLESSCRHWSCSSHSTCSTSHSRGRAPVCNAR 60

Query: 61  RRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGAQRPAQGPGLRPAAAPRG 120
           RRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGAQRPAQGPGLRPAAAPRG
Sbjct: 61  RRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGAQRPAQGPGLRPAAAPRG 120

Query: 121 AMAEPPDLRRAPGLLLLGPGGRAR 144
           AMAEPPDLRRAPGLLLLGPGGRAR
Sbjct: 121 AMAEPPDLRRAPGLLLLGPGGRAR 144


>gi|239747859 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 595

 Score =  210 bits (535), Expect = 3e-55
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 44  TCSTSHSRGRAPVCNARRRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGA 103
           TCSTSHSRGRAPVCNARRRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGA
Sbjct: 495 TCSTSHSRGRAPVCNARRRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGA 554

Query: 104 QRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR 144
           QRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR
Sbjct: 555 QRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR 595


>gi|239741741 PREDICTED: hypothetical protein XP_002342309 [Homo
           sapiens]
          Length = 404

 Score =  210 bits (535), Expect = 3e-55
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 44  TCSTSHSRGRAPVCNARRRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGA 103
           TCSTSHSRGRAPVCNARRRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGA
Sbjct: 304 TCSTSHSRGRAPVCNARRRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGA 363

Query: 104 QRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR 144
           QRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR
Sbjct: 364 QRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR 404


>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 316

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 48/146 (32%), Positives = 57/146 (39%), Gaps = 29/146 (19%)

Query: 17  GTGCSVPRSPVCSLESSCRHWSCSSHSTCSTSHSRGRAP---------VCNA-RRRRAAP 66
           G+G    RS  C   S CR  SC+ H        RGR           +C A R R A P
Sbjct: 115 GSGGRGARSRGCHSPSCCRSSSCAWH---RWPQLRGREADPRASPALLICIAPRPRPALP 171

Query: 67  AVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGAQRPA-------QGPGLRPAAAPR 119
           A +   A AT G A      R +P +     +AR    R +       + PGLR    PR
Sbjct: 172 AALHIGARATAGLA----AKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPR 227

Query: 120 -GAMAEPPDLRRAPGLLLLGPGGRAR 144
            GA  E P  RR  G    G GG  R
Sbjct: 228 GGARVERPTGRRGAG----GRGGAQR 249


>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
           sapiens]
          Length = 304

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 48/146 (32%), Positives = 57/146 (39%), Gaps = 29/146 (19%)

Query: 17  GTGCSVPRSPVCSLESSCRHWSCSSHSTCSTSHSRGRAP---------VCNA-RRRRAAP 66
           G+G    RS  C   S CR  SC+ H        RGR           +C A R R A P
Sbjct: 115 GSGGRGARSRGCHSPSCCRSSSCAWH---RWPQLRGREAEPRASPALLICIAPRPRPALP 171

Query: 67  AVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGAQRPA-------QGPGLRPAAAPR 119
           A +   A AT G A      R +P +     +AR    R +       + PGLR    PR
Sbjct: 172 AALHIGARATAGLA----AKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPR 227

Query: 120 -GAMAEPPDLRRAPGLLLLGPGGRAR 144
            GA  E P  RR  G    G GG  R
Sbjct: 228 GGARVERPTGRRGAG----GRGGAQR 249


>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
           sapiens]
          Length = 304

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 48/146 (32%), Positives = 57/146 (39%), Gaps = 29/146 (19%)

Query: 17  GTGCSVPRSPVCSLESSCRHWSCSSHSTCSTSHSRGRAP---------VCNA-RRRRAAP 66
           G+G    RS  C   S CR  SC+ H        RGR           +C A R R A P
Sbjct: 115 GSGGRGARSRGCHSPSCCRSSSCAWH---RWPQLRGREAEPRASPALLICIAPRPRPALP 171

Query: 67  AVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGAQRPA-------QGPGLRPAAAPR 119
           A +   A AT G A      R +P +     +AR    R +       + PGLR    PR
Sbjct: 172 AALHIGARATAGLA----AKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPR 227

Query: 120 -GAMAEPPDLRRAPGLLLLGPGGRAR 144
            GA  E P  RR  G    G GG  R
Sbjct: 228 GGARVERPTGRRGAG----GRGGAQR 249


>gi|7705555 iroquois homeobox 4 [Homo sapiens]
          Length = 519

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 38/135 (28%), Positives = 54/135 (40%), Gaps = 13/135 (9%)

Query: 22  VPRSPVCSLESSCRHWSCSSHSTCS----TSHSRGRAPVCNARRRRAAPAVVAAAAAATG 77
           VP      LE+  R WS +  +T +    TS S+   P C  +R+  A     ++A AT 
Sbjct: 354 VPAGASAGLEAKPRIWSLAHTATAAAAAATSLSQTEFPSCMLKRQGPAAPAAVSSAPATS 413

Query: 78  GDAWCPHVPRGRPDVRLPVPSARSGAQRPAQGPGLRPA------AAPRGAMAEPPDLRRA 131
                PH          PV S R+        P LR +      A  +GA+ +P  L R+
Sbjct: 414 PSVALPHSGALDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWATAKGALLDPGPLGRS 473

Query: 132 PGL---LLLGPGGRA 143
            G    +L  P  RA
Sbjct: 474 LGAGANVLTAPLARA 488



 Score = 26.6 bits (57), Expect = 7.7
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 6/79 (7%)

Query: 53  RAPVCNARRRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRL------PVPSARSGAQRP 106
           R P       + A   +  + AA GG A    + R R  +R       P+P A  G Q  
Sbjct: 288 RVPAAPDGPVKEASGALRMSLAAGGGAALDEDLERARSCLRSAAAGPEPLPGAEGGPQVC 347

Query: 107 AQGPGLRPAAAPRGAMAEP 125
               G  PA A  G  A+P
Sbjct: 348 EAKLGFVPAGASAGLEAKP 366


>gi|239751178 PREDICTED: basic helix-loop-helix family, member a9
           [Homo sapiens]
          Length = 235

 Score = 36.2 bits (82), Expect = 0.010
 Identities = 30/77 (38%), Positives = 31/77 (40%), Gaps = 8/77 (10%)

Query: 71  AAAAATGGDAWCPHVPRG----RPDVRLP-VPSARSGAQRPAQGPGLRPAAAPRG---AM 122
           AA   TG     P  P G    RPD   P VPSA   A  P   P  RP+A   G   A 
Sbjct: 140 AARGDTGDTGASPPPPAGPSLARPDAARPSVPSAPRCASCPPHAPLARPSAVAEGPGLAQ 199

Query: 123 AEPPDLRRAPGLLLLGP 139
           A     RR PG    GP
Sbjct: 200 ASGGSWRRCPGASSAGP 216


>gi|239745666 PREDICTED: basic helix-loop-helix family, member a9
           [Homo sapiens]
          Length = 235

 Score = 36.2 bits (82), Expect = 0.010
 Identities = 30/77 (38%), Positives = 31/77 (40%), Gaps = 8/77 (10%)

Query: 71  AAAAATGGDAWCPHVPRG----RPDVRLP-VPSARSGAQRPAQGPGLRPAAAPRG---AM 122
           AA   TG     P  P G    RPD   P VPSA   A  P   P  RP+A   G   A 
Sbjct: 140 AARGDTGDTGASPPPPAGPSLARPDAARPSVPSAPRCASCPPHAPLARPSAVAEGPGLAQ 199

Query: 123 AEPPDLRRAPGLLLLGP 139
           A     RR PG    GP
Sbjct: 200 ASGGSWRRCPGASSAGP 216


>gi|169217823 PREDICTED: similar to IQ motif and SEC7
           domain-containing protein 3 [Homo sapiens]
          Length = 185

 Score = 35.4 bits (80), Expect = 0.017
 Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 90  PDVRLPVPSARSGAQRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLL----LGPGGRA 143
           P      P+A + AQ P Q  G R AAAP  A   PP  R+  G LL     GPG RA
Sbjct: 77  PAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPP--RQHHGQLLEQPQRGPGSRA 132


>gi|169214926 PREDICTED: similar to IQ motif and SEC7
           domain-containing protein 3 [Homo sapiens]
          Length = 185

 Score = 35.4 bits (80), Expect = 0.017
 Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 90  PDVRLPVPSARSGAQRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLL----LGPGGRA 143
           P      P+A + AQ P Q  G R AAAP  A   PP  R+  G LL     GPG RA
Sbjct: 77  PAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPP--RQHHGQLLEQPQRGPGSRA 132


>gi|113431383 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 185

 Score = 35.4 bits (80), Expect = 0.017
 Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 90  PDVRLPVPSARSGAQRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLL----LGPGGRA 143
           P      P+A + AQ P Q  G R AAAP  A   PP  R+  G LL     GPG RA
Sbjct: 77  PAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPP--RQHHGQLLEQPQRGPGSRA 132


>gi|113428915 PREDICTED: similar to IQ motif and SEC7
           domain-containing protein 3 [Homo sapiens]
          Length = 185

 Score = 35.4 bits (80), Expect = 0.017
 Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 90  PDVRLPVPSARSGAQRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLL----LGPGGRA 143
           P      P+A + AQ P Q  G R AAAP  A   PP  R+  G LL     GPG RA
Sbjct: 77  PAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPP--RQHHGQLLEQPQRGPGSRA 132


>gi|239744532 PREDICTED: hypothetical protein XP_002343185 [Homo
           sapiens]
          Length = 185

 Score = 35.4 bits (80), Expect = 0.017
 Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 90  PDVRLPVPSARSGAQRPAQGPGLRPAAAPRGAMAEPPDLRRAPGLLL----LGPGGRA 143
           P      P+A + AQ P Q  G R AAAP  A   PP  R+  G LL     GPG RA
Sbjct: 77  PAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPP--RQHHGQLLEQPQRGPGSRA 132


>gi|8923842 forkhead box J2 [Homo sapiens]
          Length = 574

 Score = 35.4 bits (80), Expect = 0.017
 Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 22/114 (19%)

Query: 35  RHWSCSSHSTCSTSHS-------RGRAPVCNARRRRAAPAVVAAAAAATGGDA------- 80
           ++W+   H   +   S        G  P      R  APA +A + A T G         
Sbjct: 454 KNWTLDQHHIANLCDSLNHFLTQTGHVPPQGGTHRPPAPARIADSCALTSGKQESAMSQV 513

Query: 81  ------WCPHVPRGRPDVRLPVPSARS-GAQRPAQGPGLRPAAAPRGAMAEPPD 127
                   PH+  G P    P+P+  S G  RPA     RP+  P GA  E PD
Sbjct: 514 NSYGHPQAPHLYPG-PSPMYPIPTQDSAGYNRPAHHMVPRPSVPPPGANEEIPD 566


>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
          Length = 237

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 33/97 (34%), Positives = 36/97 (37%), Gaps = 22/97 (22%)

Query: 50  SRGRAPVCNARRRRAAPAVVAAAAAATGGDA--WCPHVPRGRPDVRLPVPSARSGAQRPA 107
           S G AP   A R    P + + A    GG    WC    R  P    P PS      RPA
Sbjct: 57  SLGSAPRSPAPREGPPPVLASPAGHLPGGRTARWCSGRARRPP----PQPS------RPA 106

Query: 108 QGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR 144
             P   P+A PRG  A              GPG RAR
Sbjct: 107 PPPPAPPSALPRGGRAARAG----------GPGSRAR 133


>gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 33/97 (34%), Positives = 36/97 (37%), Gaps = 22/97 (22%)

Query: 50  SRGRAPVCNARRRRAAPAVVAAAAAATGGDA--WCPHVPRGRPDVRLPVPSARSGAQRPA 107
           S G AP   A R    P + + A    GG    WC    R  P    P PS      RPA
Sbjct: 40  SLGSAPRSPAPREGPPPVLASPAGHLPGGRTARWCSGRARRPP----PQPS------RPA 89

Query: 108 QGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR 144
             P   P+A PRG  A              GPG RAR
Sbjct: 90  PPPPAPPSALPRGGRAARAG----------GPGSRAR 116


>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 33/97 (34%), Positives = 36/97 (37%), Gaps = 22/97 (22%)

Query: 50  SRGRAPVCNARRRRAAPAVVAAAAAATGGDA--WCPHVPRGRPDVRLPVPSARSGAQRPA 107
           S G AP   A R    P + + A    GG    WC    R  P    P PS      RPA
Sbjct: 48  SLGSAPRSPAPREGPPPVLASPAGHLPGGRTARWCSGRARRPP----PQPS------RPA 97

Query: 108 QGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR 144
             P   P+A PRG  A              GPG RAR
Sbjct: 98  PPPPAPPSALPRGGRAARAG----------GPGSRAR 124


>gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 33/97 (34%), Positives = 36/97 (37%), Gaps = 22/97 (22%)

Query: 50  SRGRAPVCNARRRRAAPAVVAAAAAATGGDA--WCPHVPRGRPDVRLPVPSARSGAQRPA 107
           S G AP   A R    P + + A    GG    WC    R  P    P PS      RPA
Sbjct: 40  SLGSAPRSPAPREGPPPVLASPAGHLPGGRTARWCSGRARRPP----PQPS------RPA 89

Query: 108 QGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR 144
             P   P+A PRG  A              GPG RAR
Sbjct: 90  PPPPAPPSALPRGGRAARAG----------GPGSRAR 116


>gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 33/97 (34%), Positives = 36/97 (37%), Gaps = 22/97 (22%)

Query: 50  SRGRAPVCNARRRRAAPAVVAAAAAATGGDA--WCPHVPRGRPDVRLPVPSARSGAQRPA 107
           S G AP   A R    P + + A    GG    WC    R  P    P PS      RPA
Sbjct: 48  SLGSAPRSPAPREGPPPVLASPAGHLPGGRTARWCSGRARRPP----PQPS------RPA 97

Query: 108 QGPGLRPAAAPRGAMAEPPDLRRAPGLLLLGPGGRAR 144
             P   P+A PRG  A              GPG RAR
Sbjct: 98  PPPPAPPSALPRGGRAARAG----------GPGSRAR 124


>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
          Length = 793

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 38/112 (33%), Positives = 43/112 (38%), Gaps = 10/112 (8%)

Query: 14  LIPGTGCSVPRSPVCSLESSCRHWSCSSHSTCSTSHSRGRAPVCNARRRRAA--PAVVAA 71
           L+   G   PR P  +  S+     CS          RG  P    RRRR    P    A
Sbjct: 80  LLGEEGLQRPREPPAAAPSAGGAAPCSPRGA-----RRGEPPQQQPRRRRREKEPEEEPA 134

Query: 72  AAAATGGDAWCPHVPRGRPDVRLPVPSARSGAQRPAQGPGLRPAAAPRGAMA 123
            AAA   DA C  +P G    R P     S    P Q P + PAAA  GA A
Sbjct: 135 GAAARAADAACNGLP-GSDSRRAPGKGGGSKGS-PGQRPPV-PAAAAAGAQA 183


>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
           [Homo sapiens]
          Length = 876

 Score = 34.7 bits (78), Expect = 0.028
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 13/76 (17%)

Query: 62  RRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGAQRPAQ-GPGL-------- 112
           ++AA A  AAAAAATG +A  P    G  +    V +  +G   PA+ GPG         
Sbjct: 5   KKAAAAAAAAAAAATGTEAG-PGTAGGSEN-GSEVAAQPAGLSGPAEVGPGAVGERTPRK 62

Query: 113 --RPAAAPRGAMAEPP 126
              P A+P G +AEPP
Sbjct: 63  KEPPRASPPGGLAEPP 78


>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
           [Homo sapiens]
          Length = 852

 Score = 34.7 bits (78), Expect = 0.028
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 13/76 (17%)

Query: 62  RRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSARSGAQRPAQ-GPGL-------- 112
           ++AA A  AAAAAATG +A  P    G  +    V +  +G   PA+ GPG         
Sbjct: 5   KKAAAAAAAAAAAATGTEAG-PGTAGGSEN-GSEVAAQPAGLSGPAEVGPGAVGERTPRK 62

Query: 113 --RPAAAPRGAMAEPP 126
              P A+P G +AEPP
Sbjct: 63  KEPPRASPPGGLAEPP 78


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 34.7 bits (78), Expect = 0.028
 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 12/94 (12%)

Query: 52  GRAPVCNARRRRAAPAVVAAAAAATGG-DAWCPHVPR--------GRPDVRLPVPSA--- 99
           G+ P   A +   A A  AAAAAA+GG      H P         G+P  R P PS+   
Sbjct: 326 GKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMD 385

Query: 100 RSGAQRPAQGPGLRPAAAPRGAMAEPPDLRRAPG 133
           + G  RP    G  P +  +G  + P      PG
Sbjct: 386 QMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPG 419


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 34.7 bits (78), Expect = 0.028
 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 12/94 (12%)

Query: 52  GRAPVCNARRRRAAPAVVAAAAAATGG-DAWCPHVPR--------GRPDVRLPVPSA--- 99
           G+ P   A +   A A  AAAAAA+GG      H P         G+P  R P PS+   
Sbjct: 326 GKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMD 385

Query: 100 RSGAQRPAQGPGLRPAAAPRGAMAEPPDLRRAPG 133
           + G  RP    G  P +  +G  + P      PG
Sbjct: 386 QMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPG 419


>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
          Length = 1013

 Score = 34.7 bits (78), Expect = 0.028
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 11/55 (20%)

Query: 77  GGDAWCPHVPRGRPDVRLPVPSARSGAQRPAQGPGLRPAAAPRG--AMAEPPDLR 129
           GGDAW P  P          P A S  +  + GPG RPA    G  A A+ PDL+
Sbjct: 181 GGDAWVPPTP---------APMATSQPEEDSFGPGPRPAGEWEGDRAEAQAPDLQ 226


>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
          Length = 1013

 Score = 34.7 bits (78), Expect = 0.028
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 11/55 (20%)

Query: 77  GGDAWCPHVPRGRPDVRLPVPSARSGAQRPAQGPGLRPAAAPRG--AMAEPPDLR 129
           GGDAW P  P          P A S  +  + GPG RPA    G  A A+ PDL+
Sbjct: 181 GGDAWVPPTP---------APMATSQPEEDSFGPGPRPAGEWEGDRAEAQAPDLQ 226


>gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo
           sapiens]
          Length = 333

 Score = 34.3 bits (77), Expect = 0.037
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 10/108 (9%)

Query: 25  SPVCSLESSCRHWSCSSHSTCSTSHSRGRAPVCNARRRRAAPAVVAAAAAATGGDAWCPH 84
           SP C+L  + +    SS  T ST   RGRA   + R   + P  + +  A     +    
Sbjct: 175 SPTCNLFPASKS-PASSPLTRSTPPVRGRAGP-SGRAAASPPTPIRSVLAPQPSTSNSQR 232

Query: 85  VPR-----GRPDVRLPVPSARSGAQRPAQGPGLRPAAAPRGAMAEPPD 127
           +PR      +   +LP+PSA     RPA    L   + P G  A PPD
Sbjct: 233 LPRPQGAAAKSSSQLPIPSA---IPRPASRMPLTSRSVPPGRGALPPD 277


>gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo
           sapiens]
          Length = 333

 Score = 34.3 bits (77), Expect = 0.037
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 10/108 (9%)

Query: 25  SPVCSLESSCRHWSCSSHSTCSTSHSRGRAPVCNARRRRAAPAVVAAAAAATGGDAWCPH 84
           SP C+L  + +    SS  T ST   RGRA   + R   + P  + +  A     +    
Sbjct: 175 SPTCNLFPASKS-PASSPLTRSTPPVRGRAGP-SGRAAASPPTPIRSVLAPQPSTSNSQR 232

Query: 85  VPR-----GRPDVRLPVPSARSGAQRPAQGPGLRPAAAPRGAMAEPPD 127
           +PR      +   +LP+PSA     RPA    L   + P G  A PPD
Sbjct: 233 LPRPQGAAAKSSSQLPIPSA---IPRPASRMPLTSRSVPPGRGALPPD 277


>gi|130502140 NEZHA isoform 2 [Homo sapiens]
          Length = 1249

 Score = 34.3 bits (77), Expect = 0.037
 Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 5/101 (4%)

Query: 40  SSHSTCSTSHSRGRAPVCNARRRRAAPAVVAAAAAATGGDAWCPHVPRGRPDVRLPVPSA 99
           S  S   +S  R    + + ++R  AP    A  +A    AW    P   P    P P+ 
Sbjct: 704 SKLSAALSSLQRDMQRLTDQQQRLLAPP--EAPGSAPPPAAWVIPGPTTGPKAASPSPAR 761

Query: 100 RSGAQRPAQGPGLRPAAAPRGAM-AEPPDLRRAPGLLLLGP 139
           R  A R + GPG  P+ +PR      P +LR AP   +L P
Sbjct: 762 RVPATRRSPGPG--PSQSPRSPKHTRPAELRLAPLTRVLTP 800


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.132    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,054,112
Number of Sequences: 37866
Number of extensions: 492027
Number of successful extensions: 4078
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 441
Number of HSP's that attempted gapping in prelim test: 3529
Number of HSP's gapped (non-prelim): 939
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.