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Search of human proteins with 239753000
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753000 PREDICTED: hypothetical protein [Homo sapiens]
(171 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753000 PREDICTED: hypothetical protein [Homo sapiens] 360 e-100
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|239755899 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239750388 PREDICTED: hypothetical protein XP_002347412 [Homo ... 39 0.002
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 38 0.004
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|239751314 PREDICTED: hypothetical protein XP_002347802 [Homo ... 37 0.008
gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens] 37 0.008
gi|4504713 insulinoma-associated 1 [Homo sapiens] 37 0.008
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 36 0.014
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.024
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 35 0.024
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 35 0.024
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 35 0.032
gi|239757230 PREDICTED: hypothetical protein [Homo sapiens] 34 0.054
gi|239753274 PREDICTED: hypothetical protein [Homo sapiens] 34 0.054
gi|239751738 PREDICTED: hypothetical protein [Homo sapiens] 34 0.054
gi|239746239 PREDICTED: hypothetical protein XP_002343711 [Homo ... 34 0.054
gi|23510413 sorting nexin 26 [Homo sapiens] 34 0.054
gi|148539870 histone deacetylase 7 isoform d [Homo sapiens] 34 0.070
gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo ... 34 0.070
gi|239754641 PREDICTED: hypothetical protein [Homo sapiens] 34 0.070
gi|239749183 PREDICTED: hypothetical protein XP_002346949 [Homo ... 34 0.070
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 34 0.070
gi|239743263 PREDICTED: hypothetical protein XP_002342813 [Homo ... 34 0.070
gi|239741542 PREDICTED: doublecortin domain-containing protein E... 34 0.070
gi|239508944 PREDICTED: hypothetical protein [Homo sapiens] 34 0.070
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 34 0.070
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 34 0.070
>gi|239753000 PREDICTED: hypothetical protein [Homo sapiens]
Length = 171
Score = 360 bits (924), Expect = e-100
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MFPDIAAGRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAK 60
MFPDIAAGRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAK
Sbjct: 1 MFPDIAAGRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAK 60
Query: 61 ASSWRCLYLSKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAPP 120
ASSWRCLYLSKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAPP
Sbjct: 61 ASSWRCLYLSKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAPP 120
Query: 121 TLPLLFHGERARGKERAGHSAQARALRRQGAGLGEGGGGEREGQKLDRGQR 171
TLPLLFHGERARGKERAGHSAQARALRRQGAGLGEGGGGEREGQKLDRGQR
Sbjct: 121 TLPLLFHGERARGKERAGHSAQARALRRQGAGLGEGGGGEREGQKLDRGQR 171
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 40.4 bits (93), Expect = 8e-04
Identities = 53/168 (31%), Positives = 64/168 (38%), Gaps = 35/168 (20%)
Query: 3 PDIAA-GRSPPRP-RRARPGRRP---HLLRPRTCSRHIHPRPPS--GSGPTTLCSST--- 52
P +AA G +PP P R+ P P H LRPR PR P GP L +
Sbjct: 83 PSLAARGTAPPAPPRQCLPTPCPPLGHGLRPRPPPGTPPPRCPRTLAPGPRGLFPAPPPA 142
Query: 53 -SQSRPAAKASSWRCLYLSKPSPAT--HYPAPDSLPSSALRRRRLPRLGPFWACALAPFL 109
+++ PA KA++ R +P PA S P L + RL R GP C L
Sbjct: 143 PARTGPAGKAAADR----GRPGPAAGRRVRRSPSFPPFLLAQTRLGRTGPLALCLL---- 194
Query: 110 PPQVRAPLAPPTLPLLFHGERARGKERAGHSAQARALRRQGAGLGEGG 157
LL HG G A RA R G GEGG
Sbjct: 195 --------------LLLHGAMRLGGGSREKLACGRAGRAARTGRGEGG 228
>gi|239755899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 459
Score = 39.3 bits (90), Expect = 0.002
Identities = 56/181 (30%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 13 RPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCLYLSKP 72
+PRRA G R C P G G C S + RPAA+ ++P
Sbjct: 153 KPRRADLGCWGSAPRALPC--------PFGRGQLPACCSPATVRPAAQG-------CAQP 197
Query: 73 SPATHYPAPDSLPSSALRR-RRLPR--------------LGPFWACA-LAPFLPPQVRAP 116
+P P P+ ALRR +LP G WA A A LP P
Sbjct: 198 APRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSLPLSNPEP 257
Query: 117 LAPPTLPL--LFHGER-----ARGKE-RAGHSAQARALRRQGAGLGEG---GGGEREGQK 165
LAP +P L +R ARG E + G +Q A R+G G+G GER+G+K
Sbjct: 258 LAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGEYSGKGQRERSGERKGKK 317
Query: 166 L 166
+
Sbjct: 318 V 318
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 39.3 bits (90), Expect = 0.002
Identities = 60/198 (30%), Positives = 70/198 (35%), Gaps = 58/198 (29%)
Query: 3 PDIAAGRSPPRPRR------------ARPGRRPHLLRPRTCSRHIH--------PRPP-- 40
P AA +PPR R RP P L R R C RH P+PP
Sbjct: 129 PAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPR-RHCRRHCRCHCRRRPLPKPPPL 187
Query: 41 ----SGSGPTTLCSSTSQSR-PAAKASSWRCLYLSKPSPATH-YPAPDSLPSS----ALR 90
+ P L + + SR P+ RC ++ SPA H P P SL R
Sbjct: 188 QPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGAR 247
Query: 91 RRRLPR----LGPFWACALAPFLPPQVRAPLAPPTLPLLFHGERARGKERAGHSAQARAL 146
RRR G CAL PP P AP RAG AR
Sbjct: 248 RRRGGEERRVRGRRQGCALGS--PPIPAGPAAP---------------GRAGERRAARQW 290
Query: 147 RRQGAGLG----EGGGGE 160
R++G G G EG GE
Sbjct: 291 RKRGGGPGVSPREGAQGE 308
>gi|239750388 PREDICTED: hypothetical protein XP_002347412 [Homo
sapiens]
Length = 459
Score = 39.3 bits (90), Expect = 0.002
Identities = 56/181 (30%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 13 RPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCLYLSKP 72
+PRRA G R C P G G C S + RPAA+ ++P
Sbjct: 153 KPRRADLGCWGSAPRALPC--------PFGRGQLPACCSPATVRPAAQG-------CAQP 197
Query: 73 SPATHYPAPDSLPSSALRR-RRLPR--------------LGPFWACA-LAPFLPPQVRAP 116
+P P P+ ALRR +LP G WA A A LP P
Sbjct: 198 APRVAAGTPAVGPTLALRRLDKLPSSRAPAPSKLTGGSLAGLLWALAGRACSLPLSNPEP 257
Query: 117 LAPPTLPL--LFHGER-----ARGKE-RAGHSAQARALRRQGAGLGEG---GGGEREGQK 165
LAP +P L +R ARG E + G +Q A R+G G+G GER+G+K
Sbjct: 258 LAPIAVPAQRLQQSQRTGDDPARGWEWQRGPQSQKEASPRRGEYSGKGQRERSGERKGKK 317
Query: 166 L 166
+
Sbjct: 318 V 318
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 38.1 bits (87), Expect = 0.004
Identities = 44/152 (28%), Positives = 51/152 (33%), Gaps = 14/152 (9%)
Query: 3 PDIAAGRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKAS 62
P G PP P G P R R P PP PT SRP+
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGA-----PPPPPSRAPTAAPPPPPPSRPSVA-- 333
Query: 63 SWRCLYLSKPSPATHYPAPD-SLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAPPT 121
+ P P YP P +LPSSA P +AP PP P PP
Sbjct: 334 ------VPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPP 387
Query: 122 LPLLFHGERARGKERAGHSAQARALRRQGAGL 153
P L + AG+ A R+GA L
Sbjct: 388 PPGLPSDGDHQVPTTAGNKAALLDQIREGAQL 419
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 37.4 bits (85), Expect = 0.006
Identities = 39/128 (30%), Positives = 50/128 (39%), Gaps = 25/128 (19%)
Query: 8 GRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCL 67
G SPP R+R PH PR RPP G+ P ++SRP ++S
Sbjct: 125 GPSPPLQPRSR---HPHTRYPRAVPEATPLRPPPGTRP------RAKSRPGCRSS----- 170
Query: 68 YLSKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVR-APLAPPTLPLLF 126
P PA ++ P R R PR G P P +R P P P
Sbjct: 171 ----PFPARSRTPGEAGPPRGDPRPRAPRPGDH------PRRSPALRETPSLSPPSPGRR 220
Query: 127 HGERARGK 134
+G+RA GK
Sbjct: 221 NGKRAAGK 228
>gi|239751314 PREDICTED: hypothetical protein XP_002347802 [Homo
sapiens]
Length = 179
Score = 37.0 bits (84), Expect = 0.008
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 18/105 (17%)
Query: 8 GRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGS-----------GPTTLCSSTSQSR 56
G S RPR A+ G+ PH + CS +P GS G TLC + Q+
Sbjct: 21 GSSGVRPRLAQ-GQLPHTVPMFLCSSPEEAKPKQGSSAPRPELASPCGRKTLCKGSRQAP 79
Query: 57 PAAKASSWRCLYLSKPS--PATHYPAPDSLPSSALRRRRLPRLGP 99
P +A +C++ + P P P P + S + +PRL P
Sbjct: 80 PGPQAHFQQCIWSASPPWVPLPFTPCPVLVGLS----QGVPRLAP 120
>gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens]
Length = 985
Score = 37.0 bits (84), Expect = 0.008
Identities = 45/165 (27%), Positives = 58/165 (35%), Gaps = 25/165 (15%)
Query: 6 AAGRSPPRPRRARPGRRP------HLLR-------PRTCSRHIHPRPPSGSGPTTLCSST 52
AA PR P RRP HLL P + H SG T C+ T
Sbjct: 389 AAPLQTASPRAGDPARRPSSAPSQHLLETAATYSAPGVGTHAPHFPSNSGYSSPTPCALT 448
Query: 53 SQSRPAAKASSWRCLYLSKPS------PATHYPAPDSLPSSALRRRRLPRLGPFWACALA 106
++ P + L PS P T Y ++P L+R R P + +
Sbjct: 449 ARLSPTYPLQAGVALTNPGPSNPLHPGPRTAYSTAYTVPMELLKRERNVAASPLPSPHGS 508
Query: 107 PFLPPQVRAPLAPPTLPLLFHGERARGKERAGHSAQARALRRQGA 151
P + + APL P TLP A HS + RR GA
Sbjct: 509 PQVLRKPGAPLGPSTLP------PASQSLHTPHSPYQKVARRTGA 547
>gi|4504713 insulinoma-associated 1 [Homo sapiens]
Length = 510
Score = 37.0 bits (84), Expect = 0.008
Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 16/110 (14%)
Query: 70 SKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQ-------------VRAP 116
++ P P P LP R L ACA P PPQ AP
Sbjct: 39 ARAEPPAPSPVPGPLPPPPPAERAHAALAAALACAPGPQPPPQGPRAAHFGNPEAAHPAP 98
Query: 117 LAPPTLPLLFHGERARGKERA---GHSAQARALRRQGAGLGEGGGGEREG 163
L PT P+ E+ + ER+ G A + A LG GGGG G
Sbjct: 99 LYSPTRPVSREHEKHKYFERSFNLGSPVSAESFPTPAALLGGGGGGGASG 148
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.2 bits (82), Expect = 0.014
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 3 PDIAAGRSP---PRPRRA-RPGRRPHLL----RPRTCSRHIHPRPPSGSGPTTLCSSTSQ 54
P++A R P P P+ A R GR P + R+ S S S ++ SS+S
Sbjct: 2572 PEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSS 2631
Query: 55 SRPAAKASSWRCLYLSKPSPATHYPAPDSLPSSAL--------RRRRLPR 96
S ++ +SS S PSPA P P +LP A RR R PR
Sbjct: 2632 SSSSSSSSSSSSSSSSSPSPAK--PGPQALPKPASPKKPPPGERRSRSPR 2679
Score = 34.3 bits (77), Expect = 0.054
Identities = 44/146 (30%), Positives = 58/146 (39%), Gaps = 17/146 (11%)
Query: 9 RSPPRPRRARPGRRPHLLRPRTCSRH---IHPRPPSGSGPTTLCSSTSQSRPAAKASSWR 65
R+PP RR R P + R R+ SR R S + P T S S++ P + S
Sbjct: 1949 RTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRS-- 2006
Query: 66 CLYLSKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAPPTLPLL 125
S+ SP T + P A+RRR R L P + R+PLA
Sbjct: 2007 ---RSRTSPVTRRRSRSRTP-PAIRRRSRSR------TPLLPRKRSRSRSPLAIRRRSRS 2056
Query: 126 FHGERARGKERAGHSAQARALRRQGA 151
ARGK S A+RR+ A
Sbjct: 2057 RTPRTARGKRSLTRSPP--AIRRRSA 2080
Score = 27.3 bits (59), Expect = 6.6
Identities = 37/162 (22%), Positives = 51/162 (31%), Gaps = 24/162 (14%)
Query: 6 AAGRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWR 65
+A R P P R+ G P P RH G P L ++ P S
Sbjct: 346 SATRPSPSPERSSTGPEPPAPTPLLAERH-------GGSPQPLATTPLSQEPVNPPSE-- 396
Query: 66 CLYLSKPSPATHYP-APDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAP----- 119
+ P+ P +P+ LP S+ P P A P + AP
Sbjct: 397 ----ASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHRE 452
Query: 120 ----PTLPLLFHGERARGKERAGHSAQARALRRQGAGLGEGG 157
PT HG R K + H+ R R + + G
Sbjct: 453 ISSSPTSKNRSHGRAKRDKSHS-HTPSRRMGRSRSPATAKRG 493
Score = 27.3 bits (59), Expect = 6.6
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 15 RRARPGRRPHLLRP------RTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCLY 68
RR R G H P RT SR R S + PT+ S S++ PA S
Sbjct: 1812 RRRRGGSGYHSRSPARQESSRTSSRRRRGR--SRTPPTSRKRSRSRTSPAPWKRS----- 1864
Query: 69 LSKPSPATHYPAPDSLPSSALRRRR 93
S+ SPATH + P + RR R
Sbjct: 1865 RSRASPATHRRSRSRTPLISRRRSR 1889
Score = 26.9 bits (58), Expect = 8.6
Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 15/114 (13%)
Query: 11 PPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCLYLS 70
PP+ + P R+ H S HP+ SG+ P ++ Q+ + R + S
Sbjct: 822 PPKQKSKTPSRQSH------SSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFES 875
Query: 71 KPSPATHYPAPDSLPSSALRRRRL-----PRLGPFWACALAPFLPPQVRAPLAP 119
P P P S R+ PR P + + P+V+A ++P
Sbjct: 876 SPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSP----SRSSSPQPKVKAIISP 925
Score = 26.9 bits (58), Expect = 8.6
Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 13/104 (12%)
Query: 9 RSPPRPRRARPGRRPHLLRPRT----------CSRHIHPRPPSGSGPTTLCSSTSQSRPA 58
R+PP RR R P L R R+ SR PR G T + R A
Sbjct: 2021 RTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSA 2080
Query: 59 AKASSWRCLYLSKPSPATHYPA---PDSLPSSALRRRRLPRLGP 99
+ +SS R + P+ H + P +L SS + P + P
Sbjct: 2081 SGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSP 2124
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 35.4 bits (80), Expect = 0.024
Identities = 38/132 (28%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 3 PDIAAGRSPPRPRRARPGRRPHLLRPRTCSR---HIHPRPPSGSGPTTLCSSTSQSRPAA 59
P + A SPP P P P + + + P PP+ + + Q+ P
Sbjct: 446 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL 505
Query: 60 KASSWRCLYLSKP----SPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRA 115
A L L+KP PA P +LPS P PF A P P
Sbjct: 506 AAPP---LQLAKPPPQAPPALATPPLQALPSPP---ASFPGQAPFSPSASLPMSPLATPP 559
Query: 116 PLAPPTL--PLL 125
P APP L PLL
Sbjct: 560 PQAPPVLAAPLL 571
Score = 34.3 bits (77), Expect = 0.054
Identities = 45/158 (28%), Positives = 57/158 (36%), Gaps = 44/158 (27%)
Query: 10 SPPRPRRARP-GRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQ-------------- 54
SP RR+R G L RP +R PRPP+ GP SS S+
Sbjct: 173 SPAMARRSRAAGTEVGLPRPAPSAR---PRPPT-EGPRKSVSSASEHSTTEPSPAARRRP 228
Query: 55 ------SRPAAKASSWRCLYLSKPSPA-------THYPAPDSLPS------------SAL 89
RPA+++ S LS P+ + PA S P +
Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP 288
Query: 90 RRRRLPRLGPFWACALAPFLPPQVRAPLAPPTLPLLFH 127
R+ P LGP + LA P APPTLP H
Sbjct: 289 RKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPH 326
Score = 30.4 bits (67), Expect = 0.78
Identities = 47/190 (24%), Positives = 62/190 (32%), Gaps = 48/190 (25%)
Query: 3 PDIAAGRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKAS 62
P + SPP P P P PP + P L Q+ PA
Sbjct: 477 PPLQVPPSPPASPPMSPSATPPPQAP----------PPLAAPPLQLAKPPPQAPPALATP 526
Query: 63 SWRCLYLSKPSPATHYP--APDSLPSSALRRRRL----PRLGPFWACAL-----APFLPP 111
+ L PSP +P AP S PS++L L P+ P A L +P P
Sbjct: 527 PLQAL----PSPPASFPGQAPFS-PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP 581
Query: 112 QVRAPLAPPTL----------------------PLLFHGERARGKERAGHSAQARALRRQ 149
++AP PPT P G + AGHS+ A + +
Sbjct: 582 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEE 641
Query: 150 GAGLGEGGGG 159
G G G
Sbjct: 642 LRGYDSGPEG 651
Score = 29.6 bits (65), Expect = 1.3
Identities = 28/95 (29%), Positives = 35/95 (36%), Gaps = 13/95 (13%)
Query: 36 HPRPPSGSG-----PTTLCSSTSQSRPAAKASSWRCLYLSKPSPATHYPAPDSLPSSALR 90
HP P G P + + PA S L PS A AP +LP++
Sbjct: 268 HPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPAT--- 324
Query: 91 RRRLPRLGPFWACALAPFLPPQVRAPLAPPTLPLL 125
P C LA LP +P APP+L L
Sbjct: 325 ----PHSSSL-TCQLATPLPLAPPSPSAPPSLQTL 354
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 35.4 bits (80), Expect = 0.024
Identities = 38/132 (28%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 3 PDIAAGRSPPRPRRARPGRRPHLLRPRTCSR---HIHPRPPSGSGPTTLCSSTSQSRPAA 59
P + A SPP P P P + + + P PP+ + + Q+ P
Sbjct: 407 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL 466
Query: 60 KASSWRCLYLSKP----SPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRA 115
A L L+KP PA P +LPS P PF A P P
Sbjct: 467 AAPP---LQLAKPPPQAPPALATPPLQALPSPP---ASFPGQAPFSPSASLPMSPLATPP 520
Query: 116 PLAPPTL--PLL 125
P APP L PLL
Sbjct: 521 PQAPPVLAAPLL 532
Score = 33.1 bits (74), Expect = 0.12
Identities = 44/156 (28%), Positives = 58/156 (37%), Gaps = 44/156 (28%)
Query: 10 SPPRPRRARP-GRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQ-------------- 54
SP RR+R G L RP +R PRPP+ GP SS S+
Sbjct: 164 SPAMARRSRAAGTEVGLPRPAPSAR---PRPPT-EGPRKSVSSASEHSTTEPSPAARRRP 219
Query: 55 ------SRPAAKASSWRCLYLSKPSPA-------THYPAPDSLPS------------SAL 89
RPA+++ S LS P+ + PA S P +
Sbjct: 220 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP 279
Query: 90 RRRRLPRLGPFWACALAPFLPPQVRAPLAPPTLPLL 125
R+ P LGP + LA P +P APP+L L
Sbjct: 280 RKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTL 315
Score = 30.4 bits (67), Expect = 0.78
Identities = 47/190 (24%), Positives = 62/190 (32%), Gaps = 48/190 (25%)
Query: 3 PDIAAGRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKAS 62
P + SPP P P P PP + P L Q+ PA
Sbjct: 438 PPLQVPPSPPASPPMSPSATPPPQAP----------PPLAAPPLQLAKPPPQAPPALATP 487
Query: 63 SWRCLYLSKPSPATHYP--APDSLPSSALRRRRL----PRLGPFWACAL-----APFLPP 111
+ L PSP +P AP S PS++L L P+ P A L +P P
Sbjct: 488 PLQAL----PSPPASFPGQAPFS-PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP 542
Query: 112 QVRAPLAPPTL----------------------PLLFHGERARGKERAGHSAQARALRRQ 149
++AP PPT P G + AGHS+ A + +
Sbjct: 543 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEE 602
Query: 150 GAGLGEGGGG 159
G G G
Sbjct: 603 LRGYDSGPEG 612
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 35.4 bits (80), Expect = 0.024
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 37 PRPPSGSGPTTLCSSTSQSRPAAKASSWRCLYLSKPSPATHYPAPDSLPSSALRRRRLPR 96
P P SG GP T ++S +RPA P +T P P P S R +LP
Sbjct: 426 PGPGSGPGPGTTSGASSPARPATPL---------VPCRSTTPPPPPPRPPS---RPKLPP 473
Query: 97 LGPFWACALAPFLPPQVRAPLAPPTLPL 124
P PF PP + + PP PL
Sbjct: 474 GKPGVGDVSRPFSPP-IHSSSPPPIAPL 500
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 35.0 bits (79), Expect = 0.032
Identities = 36/100 (36%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
Query: 82 DSLPSSALRRRR---LPRLGPFWACALAPFLPPQVRAPLAPPTLPLLF--HGE--RARGK 134
D L + RR R +PRL AP P + R P P P HG RA
Sbjct: 141 DVLRRAGRRRARPPPVPRLP-------APRAPRRPRGPATPDPSPPAGRPHGPAGRAAPG 193
Query: 135 ERAGHSAQARALRRQGAG---LGEGGGGEREGQKLDRGQR 171
R G +AQ RA R+G + GGGG R+ Q+L R +R
Sbjct: 194 RRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQWQRLARARR 233
>gi|239757230 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 34.3 bits (77), Expect = 0.054
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 10 SPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCLYL 69
S P P P H RPR + P P S P + + ++PAA A S
Sbjct: 14 SLPAPLARLPPGGLHSERPRA----VRPEPTQASQPASQRGGATVTKPAASARSAAAATG 69
Query: 70 SKPSPATHYPAPDSLP--SSALRRRRL 94
SP P P S P + A RR RL
Sbjct: 70 FPCSPGPRAPPPPSRPMGAPACRRHRL 96
>gi|239753274 PREDICTED: hypothetical protein [Homo sapiens]
Length = 263
Score = 34.3 bits (77), Expect = 0.054
Identities = 43/142 (30%), Positives = 54/142 (38%), Gaps = 14/142 (9%)
Query: 10 SPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCLYL 69
SPP P R+ G HL R ++ R P G+ C+++ SR + R
Sbjct: 23 SPPSPERSACGCGLHLSRRKSAPRG-GPGVLPGTKLNGFCAASGGSRLGDQRQEVRAAAG 81
Query: 70 SKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAPPTLPLLFHG- 128
P A A + S+ L R P P LA PP+ A P LF G
Sbjct: 82 QVPGEA---GARRARSSAQLASRTAPAAPPCAPGLLASRCPPEDSAG------PFLFLGR 132
Query: 129 ERARGKERAGH---SAQARALR 147
E RG R GH AQ R R
Sbjct: 133 EHVRGGARGGHGHCGAQGRRRR 154
>gi|239751738 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 34.3 bits (77), Expect = 0.054
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 10 SPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCLYL 69
S P P P H RPR + P P S P + + ++PAA A S
Sbjct: 14 SLPAPLARLPPGGLHSERPRA----VRPEPTQASQPASQRGGATVTKPAASARSAAAATG 69
Query: 70 SKPSPATHYPAPDSLP--SSALRRRRL 94
SP P P S P + A RR RL
Sbjct: 70 FPCSPGPRAPPPPSRPMGAPACRRHRL 96
>gi|239746239 PREDICTED: hypothetical protein XP_002343711 [Homo
sapiens]
Length = 144
Score = 34.3 bits (77), Expect = 0.054
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 10 SPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCLYL 69
S P P P H RPR + P P S P + + ++PAA A S
Sbjct: 14 SLPAPLARLPPGGLHSERPRA----VRPEPTQASQPASQRGGATVTKPAASARSAAAATG 69
Query: 70 SKPSPATHYPAPDSLP--SSALRRRRL 94
SP P P S P + A RR RL
Sbjct: 70 FPCSPGPRAPPPPSRPMGAPACRRHRL 96
>gi|23510413 sorting nexin 26 [Homo sapiens]
Length = 1126
Score = 34.3 bits (77), Expect = 0.054
Identities = 47/141 (33%), Positives = 60/141 (42%), Gaps = 29/141 (20%)
Query: 6 AAGRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGP--TTLCSSTSQSRPAAKASS 63
A GR P PR+ +P P L R P PSGS P TL S+ S+ +++AS
Sbjct: 596 ALGRGPSVPRK-KP--LPWLGGTRA------PPQPSGSRPDTVTLRSAKSEESLSSQASG 646
Query: 64 WRCLYLSKPSPATHYPAPDSLPSSALRRRRLPRL-----GPFW-AC----------ALAP 107
L +PA+ P P P +LR +P L P AC A P
Sbjct: 647 AELLGAGG-APASATPTPALSPGRSLRPHLIPLLLRGAEAPLTDACQQEMCSKLRGAQGP 705
Query: 108 FLPPQVRAPLAPPTLPLLFHG 128
L P + +PL PP L LL G
Sbjct: 706 -LGPDMESPLPPPPLSLLRPG 725
>gi|148539870 histone deacetylase 7 isoform d [Homo sapiens]
Length = 954
Score = 33.9 bits (76), Expect = 0.070
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 13 RPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSWRCLYLSKP 72
+P+++ R+ LLR + + RP G + S +S S PA+ SS P
Sbjct: 203 KPKKSLERRKNPLLRKESAPPSLRRRPAETLGDS---SPSSSSTPASGCSS--------P 251
Query: 73 SPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLP---PQVRAPLAPPTLP 123
+ + H P P + RR P LGP +P P P P A TLP
Sbjct: 252 NDSEHGPNPILGSEADSDRRTHPTLGPRGPILGSPHTPLFLPHGLEPEAGGTLP 305
>gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo
sapiens]
Length = 368
Score = 33.9 bits (76), Expect = 0.070
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 MFPDIAAGRSPPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAK 60
+ P +PPRP++AR R R R R +G L SS +++ AA
Sbjct: 283 LLPPAQGPPAPPRPQKARGSRS----RRRYLWRWDSAAGVAGGARAALSSSAAEAAAAAA 338
Query: 61 ASSW-RCLYLSKPSPATHYPAPD 82
A++ R +LS PSPA +P+
Sbjct: 339 AAAAARMDFLSGPSPAASAASPE 361
Score = 27.7 bits (60), Expect = 5.0
Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 11 PPRPRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLC----SSTSQSRPAAKASSWRC 66
PP P+RAR G P LR S H P P S P L S+ + S
Sbjct: 228 PPTPKRARTGPGPSPLR----SGHQVPSPGSVLSPHMLFGHPPSAAGGGDSGGEGSPEPL 283
Query: 67 LYLSKPSPATHYPAPDSLPSSALRRRRLPR 96
L ++ PA P P S RRR L R
Sbjct: 284 LPPAQGPPAP--PRPQKARGSRSRRRYLWR 311
>gi|239754641 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 33.9 bits (76), Expect = 0.070
Identities = 54/179 (30%), Positives = 71/179 (39%), Gaps = 34/179 (18%)
Query: 14 PRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSW-------RC 66
PRR+R R P L+P R PR P C+ S PA +S+W RC
Sbjct: 60 PRRSRRRRCPQSLQPPPSLRPRCPRRPG------QCNDGRGSPPALPSSTWRTTWSCIRC 113
Query: 67 LYLSKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAPPT-LPLL 125
+ S PA +PA + + R R P P P ++ + T LP+
Sbjct: 114 RWAS--GPAAWWPARAAPAGAETREWRTVARPP----PGRPATPGDRKSGESVGTELPVK 167
Query: 126 FHGERARGKERAGHSAQARALRRQG--------AGLGEG---GGGERE--GQKLDRGQR 171
G R R AG + RR G AGLG+G GGG+ E G +L G R
Sbjct: 168 GPG-RWRCPVEAGSGFRRLRRRRPGFPGPRHWEAGLGKGSGRGGGDAETSGGELAPGPR 225
>gi|239749183 PREDICTED: hypothetical protein XP_002346949 [Homo
sapiens]
Length = 229
Score = 33.9 bits (76), Expect = 0.070
Identities = 54/179 (30%), Positives = 71/179 (39%), Gaps = 34/179 (18%)
Query: 14 PRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSW-------RC 66
PRR+R R P L+P R PR P C+ S PA +S+W RC
Sbjct: 60 PRRSRRRRCPQSLQPPPSLRPRCPRRPG------QCNDGRGSPPALPSSTWRTTWSCIRC 113
Query: 67 LYLSKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAPPT-LPLL 125
+ S PA +PA + + R R P P P ++ + T LP+
Sbjct: 114 RWAS--GPAAWWPARAAPAGAETREWRTVARPP----PGRPATPGDRKSGESVGTELPVK 167
Query: 126 FHGERARGKERAGHSAQARALRRQG--------AGLGEG---GGGERE--GQKLDRGQR 171
G R R AG + RR G AGLG+G GGG+ E G +L G R
Sbjct: 168 GPG-RWRCPVEAGSGFRRLRRRRPGFPGPRHWEAGLGKGSGRGGGDAETSGGELAPGPR 225
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 33.9 bits (76), Expect = 0.070
Identities = 34/101 (33%), Positives = 37/101 (36%), Gaps = 23/101 (22%)
Query: 11 PPRPRRARPGRRP-------------------HLLRPRT-CSRHIHPRPP---SGSGPTT 47
PPRP AR R P HL PR CS PR P G P
Sbjct: 37 PPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLA 96
Query: 48 LCSSTSQSRPAAKASSWRCLYLSKPSPATHYPAPDSLPSSA 88
L + SQS A S R PSP++ P P PS A
Sbjct: 97 LAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCA 137
>gi|239743263 PREDICTED: hypothetical protein XP_002342813 [Homo
sapiens]
Length = 229
Score = 33.9 bits (76), Expect = 0.070
Identities = 54/179 (30%), Positives = 71/179 (39%), Gaps = 34/179 (18%)
Query: 14 PRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSW-------RC 66
PRR+R R P L+P R PR P C+ S PA +S+W RC
Sbjct: 60 PRRSRRRRCPQSLQPPPSLRPRCPRRPG------QCNDGRGSPPALPSSTWRTTWSCIRC 113
Query: 67 LYLSKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAPPT-LPLL 125
+ S PA +PA + + R R P P P ++ + T LP+
Sbjct: 114 RWAS--GPAAWWPARAAPAGAETREWRTVARPP----PGRPATPGDRKSGESVGTELPVK 167
Query: 126 FHGERARGKERAGHSAQARALRRQG--------AGLGEG---GGGERE--GQKLDRGQR 171
G R R AG + RR G AGLG+G GGG+ E G +L G R
Sbjct: 168 GPG-RWRCPVEAGSGFRRLRRRRPGFPGPRHWEAGLGKGSGRGGGDAETSGGELAPGPR 225
>gi|239741542 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 510
Score = 33.9 bits (76), Expect = 0.070
Identities = 34/101 (33%), Positives = 37/101 (36%), Gaps = 23/101 (22%)
Query: 11 PPRPRRARPGRRP-------------------HLLRPRT-CSRHIHPRPP---SGSGPTT 47
PPRP AR R P HL PR CS PR P G P
Sbjct: 37 PPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLA 96
Query: 48 LCSSTSQSRPAAKASSWRCLYLSKPSPATHYPAPDSLPSSA 88
L + SQS A S R PSP++ P P PS A
Sbjct: 97 LAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCA 137
>gi|239508944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 33.9 bits (76), Expect = 0.070
Identities = 54/179 (30%), Positives = 71/179 (39%), Gaps = 34/179 (18%)
Query: 14 PRRARPGRRPHLLRPRTCSRHIHPRPPSGSGPTTLCSSTSQSRPAAKASSW-------RC 66
PRR+R R P L+P R PR P C+ S PA +S+W RC
Sbjct: 60 PRRSRRRRCPQSLQPPPSLRPRCPRRPG------QCNDGRGSPPALPSSTWRTTWSCIRC 113
Query: 67 LYLSKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPLAPPT-LPLL 125
+ S PA +PA + + R R P P P ++ + T LP+
Sbjct: 114 RWAS--GPAAWWPARAAPAGAETREWRTVARPP----PGRPATPGDRKSGESVGTELPVK 167
Query: 126 FHGERARGKERAGHSAQARALRRQG--------AGLGEG---GGGERE--GQKLDRGQR 171
G R R AG + RR G AGLG+G GGG+ E G +L G R
Sbjct: 168 GPG-RWRCPVEAGSGFRRLRRRRPGFPGPRHWEAGLGKGSGRGGGDAETSGGELAPGPR 225
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 33.9 bits (76), Expect = 0.070
Identities = 43/158 (27%), Positives = 54/158 (34%), Gaps = 41/158 (25%)
Query: 10 SPPRPRRARPGRRPHLLR------------PRTCSRHIHPRPPSGSGPTTLCSSTSQSRP 57
+PP P R R G P R P R PRP P + ++ RP
Sbjct: 475 APPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVY--VTRVRP 532
Query: 58 AAKASSWRCLYLSKPSPATHYPAPDSLPSSALRRRRLPRLGPFWACALAPFLPPQVRAPL 117
+AS P+P +P P L R LPR+ Q+RAP
Sbjct: 533 GQRASP------RAPAPRAPWPP---FPGVFLHPRPLPRV--------------QLRAPP 569
Query: 118 APPTLPLLFHGERARGKERAGHSAQARALRRQGAGLGE 155
PP HG R G + ARA QG G+
Sbjct: 570 RPPRP----HGRRTGGPQATQPRPPARAQATQGGREGQ 603
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 33.9 bits (76), Expect = 0.070
Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Query: 37 PRPPSGSGPTTLCSSTSQSR-PAAKASSWRCLYLSKPSPATHYPAPDSLPSSALRRRRLP 95
P PP GSGP S SQ +A A S + L P +H P P LPS +P
Sbjct: 1127 PPPPQGSGPGISNSQPSQMHLNSAAAQSPMGMNLPGQQPLSHEPPPAMLPSPTPLGSNIP 1186
Query: 96 RL--------GPFWACALAPFLPPQVRAPLAP 119
P + +AP P + AP P
Sbjct: 1187 LHPNAQGTGGPPQNSMMMAPGGPDSLNAPCGP 1218
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,687,433
Number of Sequences: 37866
Number of extensions: 604105
Number of successful extensions: 4223
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 404
Number of HSP's that attempted gapping in prelim test: 3860
Number of HSP's gapped (non-prelim): 765
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.