Guide to the Human Genome
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Search of human proteins with 239752135

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239752135 PREDICTED: similar to hCG1647452 [Homo sapiens]
         (138 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752135 PREDICTED: similar to hCG1647452 [Homo sapiens]          282   5e-77
gi|113429379 PREDICTED: similar to hCG1647452 [Homo sapiens]          282   5e-77
gi|239757633 PREDICTED: similar to hCG1647452 [Homo sapiens]          278   1e-75
gi|46094070 hypothetical protein LOC80097 [Homo sapiens]              137   2e-33
gi|145976946 hypothetical protein LOC653784 [Homo sapiens]            134   3e-32
gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo s...    38   0.002
gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sa...    38   0.002
gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]    33   0.098
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]           32   0.22 
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ...    32   0.22 
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     31   0.28 
gi|46094081 development and differentiation enhancing factor 1 [...    30   0.49 
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]    30   0.63 
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            29   1.1  
gi|148746220 spermatogenesis associated, serine-rich 2 [Homo sap...    29   1.4  
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              29   1.4  
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]               29   1.4  
gi|66932988 filamin-binding LIM protein-1 isoform c [Homo sapiens]     28   1.8  
gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]     28   1.8  
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]     28   1.8  
gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens]               28   2.4  
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    28   2.4  
gi|189491748 ataxin 1 [Homo sapiens]                                   28   3.1  
gi|51479158 ataxin 1 [Homo sapiens]                                    28   3.1  
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]            28   3.1  
gi|188536004 zinc finger protein 469 [Homo sapiens]                    28   3.1  
gi|238908524 hypothetical protein LOC389333 [Homo sapiens]             27   4.1  
gi|4557733 latent transforming growth factor beta binding protei...    27   4.1  
gi|239755571 PREDICTED: hypothetical protein [Homo sapiens]            27   4.1  
gi|239753708 PREDICTED: hypothetical protein [Homo sapiens]            27   4.1  

>gi|239752135 PREDICTED: similar to hCG1647452 [Homo sapiens]
          Length = 138

 Score =  282 bits (722), Expect = 5e-77
 Identities = 138/138 (100%), Positives = 138/138 (100%)

Query: 1   MLRKYGGSYYSYVDAESKGQSPEDSWKHHSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCA 60
           MLRKYGGSYYSYVDAESKGQSPEDSWKHHSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCA
Sbjct: 1   MLRKYGGSYYSYVDAESKGQSPEDSWKHHSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCA 60

Query: 61  GQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSAT 120
           GQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSAT
Sbjct: 61  GQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSAT 120

Query: 121 RLPKWGGPGRRQQVRGST 138
           RLPKWGGPGRRQQVRGST
Sbjct: 121 RLPKWGGPGRRQQVRGST 138


>gi|113429379 PREDICTED: similar to hCG1647452 [Homo sapiens]
          Length = 138

 Score =  282 bits (722), Expect = 5e-77
 Identities = 138/138 (100%), Positives = 138/138 (100%)

Query: 1   MLRKYGGSYYSYVDAESKGQSPEDSWKHHSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCA 60
           MLRKYGGSYYSYVDAESKGQSPEDSWKHHSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCA
Sbjct: 1   MLRKYGGSYYSYVDAESKGQSPEDSWKHHSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCA 60

Query: 61  GQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSAT 120
           GQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSAT
Sbjct: 61  GQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSAT 120

Query: 121 RLPKWGGPGRRQQVRGST 138
           RLPKWGGPGRRQQVRGST
Sbjct: 121 RLPKWGGPGRRQQVRGST 138


>gi|239757633 PREDICTED: similar to hCG1647452 [Homo sapiens]
          Length = 138

 Score =  278 bits (710), Expect = 1e-75
 Identities = 136/138 (98%), Positives = 136/138 (98%)

Query: 1   MLRKYGGSYYSYVDAESKGQSPEDSWKHHSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCA 60
           MLRKYGGSYYSYVDAESKGQSPEDSWKHHSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCA
Sbjct: 1   MLRKYGGSYYSYVDAESKGQSPEDSWKHHSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCA 60

Query: 61  GQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSAT 120
           GQRMASEPQDSAAVSLHTTSVPE  GRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSAT
Sbjct: 61  GQRMASEPQDSAAVSLHTTSVPETTGRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSAT 120

Query: 121 RLPKWGGPGRRQQVRGST 138
           RLPKWGGPGRRQQVRGST
Sbjct: 121 RLPKWGGPGRRQQVRGST 138


>gi|46094070 hypothetical protein LOC80097 [Homo sapiens]
          Length = 158

 Score =  137 bits (346), Expect = 2e-33
 Identities = 73/97 (75%), Positives = 80/97 (82%), Gaps = 1/97 (1%)

Query: 42  VKLNVAPVAVFQMLKSMCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALL 101
           +KLNVAP+AVFQMLKSMCAGQR+ASEPQD AAVSL T+SVPE RGRNK S +LG   AL 
Sbjct: 63  LKLNVAPLAVFQMLKSMCAGQRLASEPQDPAAVSLPTSSVPETRGRNKGSAALGGALALA 122

Query: 102 ECSGRKGSSQRTPRQPSATRLPKWGGPGRRQQVRGST 138
           E S R+GSSQR PRQPSATRLPK GGPG +   RGST
Sbjct: 123 ERSSREGSSQRMPRQPSATRLPKGGGPG-KSPTRGST 158


>gi|145976946 hypothetical protein LOC653784 [Homo sapiens]
          Length = 158

 Score =  134 bits (336), Expect = 3e-32
 Identities = 71/97 (73%), Positives = 80/97 (82%), Gaps = 1/97 (1%)

Query: 42  VKLNVAPVAVFQMLKSMCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALL 101
           +KLNVAP+AVFQMLKSMCAGQR+ASEPQD AAVSL T+SVPE RGR+K S +LG V AL 
Sbjct: 63  LKLNVAPLAVFQMLKSMCAGQRLASEPQDPAAVSLPTSSVPETRGRDKGSAALGGVLALA 122

Query: 102 ECSGRKGSSQRTPRQPSATRLPKWGGPGRRQQVRGST 138
           E S  +GSSQR PRQPSATRLPK GGPG +   +GST
Sbjct: 123 ERSNHEGSSQRMPRQPSATRLPKGGGPG-KSPTQGST 158


>gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo
           sapiens]
          Length = 468

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 29/79 (36%), Positives = 35/79 (44%), Gaps = 14/79 (17%)

Query: 64  MASEPQDSAAVSLHTTSVPERRGRNKDSTSLGR--VPAL------------LECSGRKGS 109
           +AS  QD+ A  L  +  P  R R   + SL R  +PAL                GRKGS
Sbjct: 179 LASHDQDTLAQLLARSPPPPHRPRLPSAESLSRRPLPALPVPEAPSPSPVPSPAPGRKGS 238

Query: 110 SQRTPRQPSATRLPKWGGP 128
            Q  P  P   RLP +GGP
Sbjct: 239 IQDRPLPPPPPRLPGYGGP 257


>gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo
           sapiens]
          Length = 561

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 29/79 (36%), Positives = 35/79 (44%), Gaps = 14/79 (17%)

Query: 64  MASEPQDSAAVSLHTTSVPERRGRNKDSTSLGR--VPAL------------LECSGRKGS 109
           +AS  QD+ A  L  +  P  R R   + SL R  +PAL                GRKGS
Sbjct: 272 LASHDQDTLAQLLARSPPPPHRPRLPSAESLSRRPLPALPVPEAPSPSPVPSPAPGRKGS 331

Query: 110 SQRTPRQPSATRLPKWGGP 128
            Q  P  P   RLP +GGP
Sbjct: 332 IQDRPLPPPPPRLPGYGGP 350


>gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]
          Length = 282

 Score = 32.7 bits (73), Expect = 0.098
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 25/115 (21%)

Query: 4   KYGGSYYSYVDAESKGQSPEDSWKHHSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCAGQR 63
           +YGGS+YS     S G S     ++HS  +HS    S                      R
Sbjct: 184 RYGGSHYS-----SSGYSNSRYSRYHSSRSHSKSGSS-------------------TSSR 219

Query: 64  MASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGS-SQRTPRQP 117
            AS  + S+A    ++SV   R R++ S+     P + +   +  S S+R P+ P
Sbjct: 220 SASTSKSSSARRSKSSSVSRSRSRSRSSSMTRSPPRVSKRKSKSRSRSKRPPKSP 274


>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
          Length = 651

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 4/92 (4%)

Query: 45  NVAPVAVFQMLKSMCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECS 104
           ++ PV   Q  +  C GQ++   P+     S   T++ ++R RN    S+      LE +
Sbjct: 540 SLLPVGPIQWFRGACPGQKLIYSPK--RCHSPRVTTISDQRKRNSTDYSIRISSITLEDA 597

Query: 105 GRKGSSQRTPRQPSATRLPKWGGPGRRQQVRG 136
           G     +     P+   +    GPG +  VRG
Sbjct: 598 GTYYCMKLRRAIPANVEIK--SGPGTQMSVRG 627


>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
           sapiens]
          Length = 651

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 4/92 (4%)

Query: 45  NVAPVAVFQMLKSMCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECS 104
           ++ PV   Q  +  C GQ++   P+     S   T++ ++R RN    S+      LE +
Sbjct: 540 SLLPVGPIQWFRGACPGQKLIYSPK--RCHSPRVTTISDQRKRNSTDYSIRISSITLEDA 597

Query: 105 GRKGSSQRTPRQPSATRLPKWGGPGRRQQVRG 136
           G     +     P+   +    GPG +  VRG
Sbjct: 598 GTYYCMKLRRAIPANVEIK--SGPGTQMSVRG 627


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 9   YYSYVDAESKGQSPEDSWKH-HSHAAHSGQLQSQVKLNVAPVAVFQMLKSMCAGQRMASE 67
           Y   +  E +G+ PE +++H  S + HS Q ++Q    +A  A         +G R  S 
Sbjct: 220 YRDDITREVRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSS 279

Query: 68  PQDSAAVSLHTTS 80
             DS + S  T+S
Sbjct: 280 SSDSISSSSSTSS 292


>gi|46094081 development and differentiation enhancing factor 1 [Homo
            sapiens]
          Length = 1129

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 20/67 (29%), Positives = 31/67 (46%)

Query: 37   QLQSQVKLNVAPVAVFQMLKSMCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGR 96
            Q  S+V L   P+ +   ++S  A Q+ ASE  +    +L  T VP  R  N     + R
Sbjct: 1012 QQPSEVTLKSHPLDLSPNVQSRDAIQKQASEDSNDLTPTLPETPVPLPRKINTGKNKVRR 1071

Query: 97   VPALLEC 103
            V  + +C
Sbjct: 1072 VKTIYDC 1078


>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
          Length = 681

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 95  GRVPAL-LECSGRKGSSQRTPRQPSATRLPKWGGPG 129
           G  P L L   G  GS   TP + SA R P+ GGPG
Sbjct: 403 GAAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPG 438


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 56  KSMCAGQRMASEPQDSAAV-SLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTP 114
           K+  AG +     Q  AAV  + +     RRG+           A     G K   +   
Sbjct: 334 KAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAK 393

Query: 115 RQPSATRLPKWGGPGRRQQ 133
           R+    + P+W  P RR Q
Sbjct: 394 RRGDGRKKPRWQNPRRRAQ 412


>gi|148746220 spermatogenesis associated, serine-rich 2 [Homo
           sapiens]
          Length = 545

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 9/71 (12%)

Query: 66  SEPQDSAAVSLHT-TSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSATRLP- 123
           S P D++A S  T  S P     NK + + G  PA +       +S   P QP    LP 
Sbjct: 393 SSPSDASAASSSTCASPPSLTSANKKNFAPGETPAAI------ANSSGQPYQPLREVLPG 446

Query: 124 -KWGGPGRRQQ 133
            + GG G R Q
Sbjct: 447 NRRGGQGYRPQ 457


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)

Query: 58  MCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRV-PALLECSGRKGSSQRTPRQ 116
           +CAG      P    A      ++     RNK+ +   +  P+++      GS+ R P +
Sbjct: 218 VCAGHEAFRTPAMKNARRSEAETLSGLTSRNKNGSWGPKTKPSVIHSRSPPGSTPRLPER 277

Query: 117 PSATRLPKWGGPGRRQQ 133
           P  +  P    PGR  Q
Sbjct: 278 PGPSNPPVGPAPGRHPQ 294


>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
          Length = 411

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 81  VPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPR-QPSATRLPK-WGGPGRRQQ 133
           VP +RGR   +  L  VPA    + ++G S   P  +P+   L + WGGPG R Q
Sbjct: 33  VPGQRGRGARAAPL--VPAASASAPQRGPSGILPAAEPTICSLHQAWGGPGCRAQ 85


>gi|66932988 filamin-binding LIM protein-1 isoform c [Homo sapiens]
          Length = 276

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 64  MASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKG------SSQRTPRQP 117
           MAS+P+   A S+  T  P RR       ++        C  R+G      +  +TP   
Sbjct: 1   MASKPEKRVASSVFITLAPPRR-----DVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAG 55

Query: 118 SATRLPKWGGPGR 130
            A R   W  PGR
Sbjct: 56  LAGRPSPWTTPGR 68


>gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]
          Length = 374

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 64  MASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKG------SSQRTPRQP 117
           MAS+P+   A S+  T  P RR       ++        C  R+G      +  +TP   
Sbjct: 1   MASKPEKRVASSVFITLAPPRR-----DVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAG 55

Query: 118 SATRLPKWGGPGR 130
            A R   W  PGR
Sbjct: 56  LAGRPSPWTTPGR 68


>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
          Length = 373

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 64  MASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKG------SSQRTPRQP 117
           MAS+P+   A S+  T  P RR       ++        C  R+G      +  +TP   
Sbjct: 1   MASKPEKRVASSVFITLAPPRR-----DVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAG 55

Query: 118 SATRLPKWGGPGR 130
            A R   W  PGR
Sbjct: 56  LAGRPSPWTTPGR 68


>gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens]
          Length = 653

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)

Query: 56  KSMCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLEC 103
           KS+C+G R+ +   D A V L  T +      NKD      +P L +C
Sbjct: 459 KSICSGGRLRAHAHDVAQVFLDETMIGILNENNKDL----HIPELRDC 502


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 55  LKSMCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTP 114
           +K+  + +++  EP+  +       + P+    + ++ S G  P  +    R     R  
Sbjct: 55  MKNATSSKQLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAM--GPRDARPPRRS 112

Query: 115 RQPSATRLPKWGGPGRRQQVR 135
            QPS T +P    P  +Q+V+
Sbjct: 113 SQPSPTAVPASDSPPTKQEVK 133


>gi|189491748 ataxin 1 [Homo sapiens]
          Length = 815

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 17/107 (15%)

Query: 43  KLNVAPVAVFQMLKSMCAGQRMASEPQDSAAVSLHTTSVP-----------ERRGRNKDS 91
           KL+V  V +   LK++  G     +P D A+V L  +              +  G N+ S
Sbjct: 675 KLSVGDVCISLTLKNLKNGSVKKGQPVDPASVLLKHSKADGLAGSRHRYAEQENGINQGS 734

Query: 92  TSLGRVPALLECSGRKGS------SQRTPRQPSATRLPKWGGPGRRQ 132
             +      L+   + G       ++  P +P+ATR  +W  P  R+
Sbjct: 735 AQMLSENGELKFPEKMGLPAAPFLTKIEPSKPAATRKRRWSAPESRK 781


>gi|51479158 ataxin 1 [Homo sapiens]
          Length = 815

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 17/107 (15%)

Query: 43  KLNVAPVAVFQMLKSMCAGQRMASEPQDSAAVSLHTTSVP-----------ERRGRNKDS 91
           KL+V  V +   LK++  G     +P D A+V L  +              +  G N+ S
Sbjct: 675 KLSVGDVCISLTLKNLKNGSVKKGQPVDPASVLLKHSKADGLAGSRHRYAEQENGINQGS 734

Query: 92  TSLGRVPALLECSGRKGS------SQRTPRQPSATRLPKWGGPGRRQ 132
             +      L+   + G       ++  P +P+ATR  +W  P  R+
Sbjct: 735 AQMLSENGELKFPEKMGLPAAPFLTKIEPSKPAATRKRRWSAPESRK 781


>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1230

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 10/54 (18%)

Query: 86  GRNKDSTSLGR-----VPALLEC---SGRKGSSQRTPRQPSATRLP--KWGGPG 129
           G +   T LGR     + AL+ C     R GS++R   QP+   LP  +W  PG
Sbjct: 775 GLDTSGTLLGRPCLEPISALMICVEADTRPGSARRLTLQPAGASLPSREWSSPG 828


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 10/71 (14%)

Query: 54   MLKSMCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRT 113
            +L   C G R A   Q+ A  +      P     N++S +L    AL     R GS  RT
Sbjct: 2006 VLLEKCKGSRAAMSLQEEAEPT------PSPPSPNRESLAL----ALTAAHSRSGSEGRT 2055

Query: 114  PRQPSATRLPK 124
            P + S+  L K
Sbjct: 2056 PERASSPGLNK 2066


>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
          Length = 1015

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 86  GRNKDSTSLGRVP----ALLECSGRKGSSQRTPRQPSATRLPKWGGP 128
           G N+D  +   VP          G + SSQR+P  P+  R P+ G P
Sbjct: 758 GENRDVEAQRLVPDGDGRTSPLGGARSSSQRSPVGPAGVRSPRPGSP 804


>gi|4557733 latent transforming growth factor beta binding protein 2
           [Homo sapiens]
          Length = 1821

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 32  AAHSGQLQSQVKLNVAPVAVFQMLKSMCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDS 91
           AA + ++ S  +   APVA  Q ++    G      P ++ A          RR      
Sbjct: 62  AAAAAKVYSLFREQDAPVAGLQPVERAQPGWGSPRRPTEAEA----------RRPSRAQQ 111

Query: 92  TSLGRVPALLECSGRKGSSQRTPRQPSATRLPKWGGPGR 130
           +   + PA    S   G  Q  PR  +A  LP+ G P R
Sbjct: 112 SRRVQPPAQTRRSTPLGQQQPAPRTRAAPALPRLGTPQR 150


>gi|239755571 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 261

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 18/72 (25%), Positives = 31/72 (43%)

Query: 57  SMCAGQRMASEPQDSAAVSLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPRQ 116
           S C GQ   ++ +    VS    S  +R   + +  +    PA +  S  +G ++   R+
Sbjct: 43  SDCLGQGRRAQRRPGPGVSAVGASGQQRAPESNERPAEEPTPAPMPSSAPRGPTEPALRR 102

Query: 117 PSATRLPKWGGP 128
           PS+   P   GP
Sbjct: 103 PSSADRPLAPGP 114


>gi|239753708 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 128

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 10/65 (15%)

Query: 75  SLHTTSVPERRGRNKDSTSLGRVPALLECSGRKGSSQRTPRQPSAT---------RLPKW 125
           SL T S P RR     S  LGRV   L   GR G  +R     +A          RL KW
Sbjct: 58  SLATCSSPARRNAQFASLVLGRV-IRLPWKGRAGWGRRLRNWSAAEEAALGRGRGRLAKW 116

Query: 126 GGPGR 130
            G GR
Sbjct: 117 IGCGR 121


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.125    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,924,270
Number of Sequences: 37866
Number of extensions: 252967
Number of successful extensions: 756
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 732
Number of HSP's gapped (non-prelim): 56
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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