Guide to the Human Genome
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Name: GLB1L3 Sequence: fasta or formatted (653aa) NCBI GI: 164519026
Description:

galactosidase, beta 1 like 3

Referenced in:

Galactose and Lactose

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         27           2
 C cysteine            0.9          6           1
 D aspartate           4.0         26           1
 E glutamate           5.8         38           2
 F phenylalanine       5.7         37           2
 G glycine             7.8         51           2
 H histidine           3.4         22           2
 I isoleucine          4.7         31           1
 K lysine              6.1         40           1
 L leucine            11.6         76           3
 M methionine          2.3         15           2
 N asparagine          5.1         33           2
 P proline             6.4         42           2
 Q glutamine           3.2         21           1
 R arginine            5.4         35           2
 S serine              6.7         44           2
 T threonine           4.3         28           2
 V valine              5.8         38           1
 W tryptophan          2.3         15           1
 Y tyrosine            4.3         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galactosidase, beta 1 like 3 
GLB1L2                0.539   galactosidase, beta 1-like 2 
GLB1L                 0.250   galactosidase, beta 1-like 
GLB1                  0.239   galactosidase, beta 1 isoform b 
GLB1                  0.239   galactosidase, beta 1 isoform a preproprotein [Homo...
GLB1                  0.110   galactosidase, beta 1 isoform c preproprotein [Homo...
RBM12                 0.005   RNA binding motif protein 12 
RBM12                 0.005   RNA binding motif protein 12 
FAM98C                0.005   hypothetical protein LOC147965 
BAT2                  0.005   HLA-B associated transcript-2 
IVD                   0.004   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
DCC                   0.004   deleted in colorectal carcinoma 
PLXND1                0.004   plexin D1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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