Guide to the Human Genome
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Name: FAM128A Sequence: fasta or formatted (158aa) NCBI GI: 145976946
Description:

hypothetical protein LOC653784

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.3         21           2
 C cysteine            0.6          1           1
 D aspartate           3.2          5           1
 E glutamate           5.7          9           2
 F phenylalanine       1.3          2           1
 G glycine            12.0         19           3
 H histidine           0.6          1           1
 I isoleucine          1.3          2           1
 K lysine              5.7          9           2
 L leucine            11.4         18           2
 M methionine          3.2          5           1
 N asparagine          1.3          2           1
 P proline             9.5         15           2
 Q glutamine           5.7          9           1
 R arginine            6.3         10           2
 S serine              8.9         14           2
 T threonine           3.8          6           1
 V valine              5.7          9           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC653784 
FAM128B               0.954   hypothetical protein LOC80097 
LOC729526             0.382   PREDICTED: similar to hCG1647452 
LOC729526             0.382   PREDICTED: similar to hCG1647452 
LOC729526             0.382   PREDICTED: similar to hCG1647452 
NAB2                  0.032   NGFI-A binding protein 2 
TNK2                  0.028   tyrosine kinase, non-receptor, 2 isoform 1 
TNK2                  0.028   tyrosine kinase, non-receptor, 2 isoform 2 
BRSK1                 0.021   BR serine/threonine kinase 1 
FOXL1                 0.021   forkhead box L1 
EFS                   0.021   embryonal Fyn-associated substrate isoform 2 
EFS                   0.021   embryonal Fyn-associated substrate isoform 1 
C14orf169             0.018   chromosome 14 open reading frame 169 
BAT2D1                0.018   HBxAg transactivated protein 2 
MADD                  0.018   MAP-kinase activating death domain-containing prote...
MADD                  0.018   MAP-kinase activating death domain-containing prote...
MADD                  0.018   MAP-kinase activating death domain-containing prote...
MADD                  0.018   MAP-kinase activating death domain-containing protei...
MADD                  0.018   MAP-kinase activating death domain-containing prote...
MADD                  0.018   MAP-kinase activating death domain-containing prote...
MADD                  0.018   MAP-kinase activating death domain-containing prote...
MADD                  0.018   MAP-kinase activating death domain-containing prote...
MADD                  0.018   MAP-kinase activating death domain-containing prote...
MADD                  0.018   MAP-kinase activating death domain-containing prote...
PER3                  0.018   period 3 
ASCL1                 0.018   achaete-scute complex homolog 1 
LOC100289737          0.018   PREDICTED: hypothetical protein XP_002347183 
LOC100288678          0.018   PREDICTED: hypothetical protein XP_002343039 
ATXN7                 0.018   ataxin 7 isoform b 
ATXN7                 0.018   ataxin 7 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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