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Search of human proteins with 239752133
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]
(224 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752133 PREDICTED: hypothetical protein [Homo sapiens] 479 e-136
gi|239746658 PREDICTED: hypothetical protein [Homo sapiens] 394 e-110
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 48 6e-06
gi|239757244 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-05
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-05
gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo ... 46 2e-05
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 44 1e-04
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 44 1e-04
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 44 1e-04
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 44 1e-04
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 42 4e-04
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 42 6e-04
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 41 7e-04
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 41 0.001
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 41 0.001
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 41 0.001
gi|19924099 synapsin I isoform Ia [Homo sapiens] 41 0.001
gi|19924097 synapsin I isoform Ib [Homo sapiens] 41 0.001
gi|118200352 hypothetical protein LOC642273 [Homo sapiens] 41 0.001
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 41 0.001
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 40 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.002
gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo ... 40 0.002
gi|13994190 frizzled 8 [Homo sapiens] 40 0.002
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 40 0.002
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 40 0.002
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 40 0.002
>gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]
Length = 224
Score = 479 bits (1233), Expect = e-136
Identities = 224/224 (100%), Positives = 224/224 (100%)
Query: 1 MGSSAPHPPIQALFDRPGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPG 60
MGSSAPHPPIQALFDRPGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPG
Sbjct: 1 MGSSAPHPPIQALFDRPGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPG 60
Query: 61 AGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEG 120
AGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEG
Sbjct: 61 AGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEG 120
Query: 121 PLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQRR 180
PLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQRR
Sbjct: 121 PLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQRR 180
Query: 181 PPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAPPGCFCPACSQ 224
PPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAPPGCFCPACSQ
Sbjct: 181 PPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAPPGCFCPACSQ 224
>gi|239746658 PREDICTED: hypothetical protein [Homo sapiens]
Length = 411
Score = 394 bits (1012), Expect = e-110
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 43 QGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAV 102
QGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAV
Sbjct: 230 QGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAV 289
Query: 103 LACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPG 162
LACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPG
Sbjct: 290 LACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPG 349
Query: 163 NARQSRGVGAGKPEPQRRPPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAPPGCFCPAC 222
NARQSRGVGAGKPEPQRRPPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAPPGCFCPAC
Sbjct: 350 NARQSRGVGAGKPEPQRRPPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAPPGCFCPAC 409
Query: 223 SQ 224
SQ
Sbjct: 410 SQ 411
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 48.1 bits (113), Expect = 6e-06
Identities = 56/204 (27%), Positives = 72/204 (35%), Gaps = 32/204 (15%)
Query: 30 RVPGRRLDEGGGVQGRWKNRG------------RGTYRGAGPGAGSAPPGETPAPYTRRS 77
R P D+ G GR + G Y G + PP P P RR+
Sbjct: 1471 RPPSAPADKDGSKPGRTRGDGALQSLCLTTPTEEAVYCFYGNDSDEEPPAAAPTPTHRRT 1530
Query: 78 G--PRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGWAST 135
PR+ T R A AA AR P+ A+E P + S +++
Sbjct: 1531 SAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPS--LIADETPPCY----SLSSSAS 1584
Query: 136 FLSAPGPQHPPT--PPACSGAATRREPPGNARQSRGVGAGKPE----------PQRRPPR 183
LS P P PP P A T+ PG R S E P+RRPP
Sbjct: 1585 SLSEPEPSEPPAVHPRGREPAVTKDPGPGGGRDSSPSPRAAEELLQRCISSALPRRRPPV 1644
Query: 184 GSRAARRPRARRVFTDPRRHTRHR 207
R+PRA R+ P +R R
Sbjct: 1645 SGLRRRKPRATRLDERPAEGSRER 1668
>gi|239757244 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 46.2 bits (108), Expect = 2e-05
Identities = 56/208 (26%), Positives = 71/208 (34%), Gaps = 25/208 (12%)
Query: 18 GSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPA-PYTRR 76
GS SR P R GG G R R G G +G APP A P R
Sbjct: 2 GSGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQPR 61
Query: 77 SGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGW-AST 135
PR T R +W AC++ SP G +E W S
Sbjct: 62 PTPR-LTGRSSW--------------RACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSA 106
Query: 136 FLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQRRPPRGSRAARRPRARR 195
+ G +H G G A +S+ +G +P + S + + R
Sbjct: 107 WHLGDGQRHAGCAQVVGGER------GGAERSQ-LGLQQPLAEALVKEASGRRKSGQRGR 159
Query: 196 VFTDPRRHTRHRTRRSVAPPGCFCPACS 223
PRR RHR APP C PAC+
Sbjct: 160 GAAQPRRLHRHRDLHP-APPRCSAPACA 186
>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 46.2 bits (108), Expect = 2e-05
Identities = 59/212 (27%), Positives = 74/212 (34%), Gaps = 28/212 (13%)
Query: 16 RPG--SRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPA-P 72
RPG RP SR P R GG G R R G G +G APP A P
Sbjct: 20 RPGWTGRPRGTA-RTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYP 78
Query: 73 YTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGW 132
R PR T R +W AC++ SP G +E W
Sbjct: 79 LQPRPTPR-LTGRSSW--------------RACTSTCSPTTLTAISSGEKCFTSSSTEKW 123
Query: 133 -ASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQRRPPRGSRAARRP 191
S + G +H G G A +S+ +G +P + S +
Sbjct: 124 PGSAWHLGDGQRHAGCAQVVGGER------GGAERSQ-LGLQQPLAEALVKEASGRRKSG 176
Query: 192 RARRVFTDPRRHTRHRTRRSVAPPGCFCPACS 223
+ R PRR RHR APP C PAC+
Sbjct: 177 QRGRGAAQPRRLHRHRDLHP-APPRCSAPACA 207
>gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo
sapiens]
Length = 211
Score = 46.2 bits (108), Expect = 2e-05
Identities = 59/212 (27%), Positives = 74/212 (34%), Gaps = 28/212 (13%)
Query: 16 RPG--SRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPA-P 72
RPG RP SR P R GG G R R G G +G APP A P
Sbjct: 20 RPGWTGRPRGTA-RTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYP 78
Query: 73 YTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGW 132
R PR T R +W AC++ SP G +E W
Sbjct: 79 LQPRPTPR-LTGRSSW--------------RACTSTCSPTTLTAISSGEKCFTSSSTEKW 123
Query: 133 -ASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQRRPPRGSRAARRP 191
S + G +H G G A +S+ +G +P + S +
Sbjct: 124 PGSAWHLGDGQRHAGCAQVVGGER------GGAERSQ-LGLQQPLAEALVKEASGRRKSG 176
Query: 192 RARRVFTDPRRHTRHRTRRSVAPPGCFCPACS 223
+ R PRR RHR APP C PAC+
Sbjct: 177 QRGRGAAQPRRLHRHRDLHP-APPRCSAPACA 207
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 43.9 bits (102), Expect = 1e-04
Identities = 55/197 (27%), Positives = 64/197 (32%), Gaps = 18/197 (9%)
Query: 32 PGRRLDEGG----GVQGRWKNRG-RGTYRGAGPGAGSAPPGET--PAPYTRRSGPRSRTW 84
PG + D GG G +G N G RG GP + P GE P P P SR
Sbjct: 773 PGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGN 832
Query: 85 RRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQH 144
+ G + AVG A + G E G + +PGP
Sbjct: 833 PGSRGENGPTGAVGFAGPQGPDGQ----PGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHG 888
Query: 145 PPTPPACSGAATRREPPGNARQSRGVG-AGKPEPQRRP----PRGSRAARRPRARRVFTD 199
P P G + PPG G G P P P P G P R D
Sbjct: 889 PNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLR--GD 946
Query: 200 PRRHTRHRTRRSVAPPG 216
P H R R PPG
Sbjct: 947 PGSHGRVGDRGPAGPPG 963
Score = 28.9 bits (63), Expect = 3.7
Identities = 51/217 (23%), Positives = 66/217 (30%), Gaps = 39/217 (17%)
Query: 1 MGSSAPHPPIQALFDRPGSRPSSAVGE----------GSRVPGRRLDEGG--GVQGRWKN 48
+G P P + G+ P+ GE GSR P + G G GR N
Sbjct: 215 VGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGN 274
Query: 49 RGRGTYRGAG-----PGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVL 103
G + G+ PGA P + + GP+ G G +
Sbjct: 275 PGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGA-----PGSKGEAGPTGPM 329
Query: 104 ACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGN 163
L P G E G L + A PGP P P SG PGN
Sbjct: 330 GAMGPLGPR-GMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGF------PGN 382
Query: 164 ARQSRGVGAGKPEPQRRPPRGSRAARRPRARRVFTDP 200
G P G+R P+ +R T P
Sbjct: 383 PGMKGEAG----------PTGARGPEGPQGQRGETGP 409
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 43.5 bits (101), Expect = 1e-04
Identities = 58/186 (31%), Positives = 68/186 (36%), Gaps = 17/186 (9%)
Query: 16 RPGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTR 75
R GSR G G+ P G G GR RGRG + AG G A +P
Sbjct: 73 RAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCHSPSCC 132
Query: 76 RSGPRSRTWRRTWCWTGDSAAVGAA-AVLACSA-----RLSPADGFGAEEGPLAHLEERS 129
RS S W R G A A+ A+L C A L A GA +
Sbjct: 133 RSS--SCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQ 190
Query: 130 EGWASTFLSAPGPQ---HPPTP--PACSGAATRREPPGNARQSRGVG----AGKPEPQRR 180
S +A G + PPTP P G + P G AR R G G+ QR
Sbjct: 191 PQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGGAQRI 250
Query: 181 PPRGSR 186
PPR R
Sbjct: 251 PPRPLR 256
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 43.5 bits (101), Expect = 1e-04
Identities = 58/186 (31%), Positives = 68/186 (36%), Gaps = 17/186 (9%)
Query: 16 RPGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTR 75
R GSR G G+ P G G GR RGRG + AG G A +P
Sbjct: 73 RAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCHSPSCC 132
Query: 76 RSGPRSRTWRRTWCWTGDSAAVGAA-AVLACSA-----RLSPADGFGAEEGPLAHLEERS 129
RS S W R G A A+ A+L C A L A GA +
Sbjct: 133 RSS--SCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQ 190
Query: 130 EGWASTFLSAPGPQ---HPPTP--PACSGAATRREPPGNARQSRGVG----AGKPEPQRR 180
S +A G + PPTP P G + P G AR R G G+ QR
Sbjct: 191 PQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGGAQRI 250
Query: 181 PPRGSR 186
PPR R
Sbjct: 251 PPRPLR 256
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 43.5 bits (101), Expect = 1e-04
Identities = 58/219 (26%), Positives = 83/219 (37%), Gaps = 51/219 (23%)
Query: 2 GSSAPHPPIQALFDRPGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGT-------- 53
G+ +P P ++ + P+S G G G G G +G + RGRG
Sbjct: 1001 GNLSPAPRLRRDYSYERVGPTSCRGRGR---GEYFARGRGFRGTYGGRGRGARSREFRSY 1057
Query: 54 --YRGA-GPGAGSAPPGETPAPY------TRRSG------PRSRTWRRTWCWTGDSAAVG 98
+RG G G G+ P PAP TR G P+ R R + ++ +
Sbjct: 1058 REFRGDDGRGGGTGGPNHPPAPRGRTASETRSEGSEYEEIPKRRRQRGS-----ETGSET 1112
Query: 99 AAAVLACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAAT-- 156
+ LA S + +P +EG L + L+ P P PP+P A
Sbjct: 1113 HESDLAPSDKEAPTP----KEGTLTQVP----------LAPPPPGAPPSPAPARFTARGG 1158
Query: 157 RREPPGNARQSRGVGAGKPEPQ----RRPPRGSRAARRP 191
R P RG G G+P PQ PP S A ++P
Sbjct: 1159 RVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKKP 1197
Score = 34.3 bits (77), Expect = 0.089
Identities = 37/161 (22%), Positives = 57/161 (35%), Gaps = 19/161 (11%)
Query: 59 PGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAE 118
P + PP P P T P ++ G V AA L + + G+
Sbjct: 529 PAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPG----VAAAPTLVSGGGSTSSTSSGSF 584
Query: 119 EGPLAHLEERSEGWASTFLSAPGPQHPPTP---PACSGAATRREPPGNARQSRGVGAGKP 175
E + S+ P P PP P P G R+PP G G P
Sbjct: 585 EASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQ-------GLGYP 637
Query: 176 EPQRR-PPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAPP 215
+ Q+ PPR +R + ++ ++H + ++ APP
Sbjct: 638 KYQKSLPPR----FQRQQQEQLLKQQQQHQWQQHQQGSAPP 674
Score = 30.4 bits (67), Expect = 1.3
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Query: 3 SSAPHPPIQAL-FDRPGSRP------SSAVGEGSRVPGRR---LDEGGGVQGRWKNRGRG 52
+ AP PPI + PG RP S V + P ++ +E + G GR
Sbjct: 844 NGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTG--PEAGRK 901
Query: 53 TYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRR 86
RG G G PP + R GPR + RR
Sbjct: 902 PARGVGSGGQGPPPPRRESRTETRWGPRPGSSRR 935
Score = 30.0 bits (66), Expect = 1.7
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 9/81 (11%)
Query: 137 LSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGA--GKPEPQRRPPRG-SRAARRPRA 193
L PGP+ P PP A + PP + A PE R+P RG + P
Sbjct: 856 LEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQGP-- 913
Query: 194 RRVFTDPRRHTRHRTRRSVAP 214
PRR +R TR P
Sbjct: 914 ----PPPRRESRTETRWGPRP 930
Score = 29.3 bits (64), Expect = 2.8
Identities = 29/92 (31%), Positives = 32/92 (34%), Gaps = 16/92 (17%)
Query: 132 WASTFL---SAPGPQ--HPPTPPACSGAATRREPPGNARQSRGVGAGKPEP--------Q 178
WA T + PGP PP PP G A PPG+ G P P Q
Sbjct: 392 WAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQ 451
Query: 179 RRPPRGSR---AARRPRARRVFTDPRRHTRHR 207
RR S A R R RR + R R
Sbjct: 452 RRKQSSSEISLAVERARRRREEEERRMQEERR 483
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 116 GAEEGPLAHLE-ERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGK 174
GA +G + HL R G A+T T P + AA + P A +SRG +
Sbjct: 262 GAPDG-VGHLHGSRGSGRAAT----------TTRPQTTPAAASPDLPQPAERSRG--EPR 308
Query: 175 PEPQRRPPRGSRAARRP------RARRVFTDPRRHTRHRTRRSVAPPGC 217
P R PPR AARRP RR + P R R RRS A P C
Sbjct: 309 PAEPRAPPRPPPAARRPPPATAPSPRRAGSPPTREEEPRPRRSAARPQC 357
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 42.0 bits (97), Expect = 4e-04
Identities = 54/180 (30%), Positives = 62/180 (34%), Gaps = 30/180 (16%)
Query: 19 SRPSSAVGEGSRVPGRRL-----DEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPAPY 73
S ++ GE R RRL D+ G KN R R AG P +
Sbjct: 4 SNAATKCGEEPRSGSRRLPKAEGDKSGSAGAPSKNSSRLGGRPCMCTAGRRP--NRASGR 61
Query: 74 TRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACS-ARLSPADGFGAEEGPLAHLEERSEGW 132
RRS + TW C+ AA AC A P A P H R G
Sbjct: 62 RRRSCSPAPTWPPLCCYPQSRPTASAAGPGACMRASGRPHGNTTASTAPPRHPRPRRPG- 120
Query: 133 ASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQRRPPRGSRAARRPR 192
GP PTP C+G A PP +R R RRP R RA RR R
Sbjct: 121 --------GPALRPTPRPCAGPA----PPPASRDCR---------CRRPRRWPRAGRRGR 159
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 41.6 bits (96), Expect = 6e-04
Identities = 43/150 (28%), Positives = 47/150 (31%), Gaps = 24/150 (16%)
Query: 59 PGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAE 118
P + P PAP+ R WRRT G GA ADGF
Sbjct: 918 PAYPAPRPAPGPAPFVPRERASVDRWRRT---KGAGPPGGAGL----------ADGFHRY 964
Query: 119 EGP---------LAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRG 169
GP L G A LS P Q P PP A R + P A G
Sbjct: 965 YGPIEPQGLGLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEP--AEPPAG 1022
Query: 170 VGAGKPEPQRRPPRGSRAARRPRARRVFTD 199
G P P P + A P R F D
Sbjct: 1023 AFPGFPSPPAPPAAAATAVGPPLCRLAFED 1052
Score = 32.0 bits (71), Expect = 0.44
Identities = 53/196 (27%), Positives = 66/196 (33%), Gaps = 41/196 (20%)
Query: 6 PHPPIQALFDRPGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGP--GAGS 63
P PP Q L P A G VP R RW+ +GAGP GAG
Sbjct: 908 PPPPPQPLPSPAYPAPRPAPGPAPFVPRERASVD-----RWRRT-----KGAGPPGGAGL 957
Query: 64 APPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLA 123
A + R GP +A GAA LSP ++ P +
Sbjct: 958 ADG------FHRYYGPIEPQGLGLGLGEARAAPRGAAG-----RPLSPPAAQPPQKPPPS 1006
Query: 124 HL-----EERSEGWASTFLSAPGPQHPPT-------PPACSGAATRREPPGNARQSRGVG 171
+ +E +E A F P P PP PP C A PP AR R
Sbjct: 1007 YFAIVRDKEPAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRS-- 1064
Query: 172 AGKPEPQRRPPRGSRA 187
+P+ +P G A
Sbjct: 1065 ----DPESQPLLGPGA 1076
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 41.2 bits (95), Expect = 7e-04
Identities = 59/205 (28%), Positives = 73/205 (35%), Gaps = 45/205 (21%)
Query: 42 VQGRWKNRGRGTYRGAGPGAGSA-----PPGETPAPYTR-------RSGPRSRTWRRTWC 89
V +W +R R A A +A PPG P +R R+ P +
Sbjct: 25 VNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRV 84
Query: 90 WTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGP------- 142
G A GA A +RL A AH +E + + PGP
Sbjct: 85 LAGAPARTGALA----GSRLRAA-------AAAAHDQEAAAPTGRRWRRRPGPSPPLQPR 133
Query: 143 -QHPPT--PPACSGAATRREPPGNA--RQSRGVGAGKPEPQRR-------PPRGSRAARR 190
+HP T P A A R PPG +SR P P R PPRG R
Sbjct: 134 SRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDP---R 190
Query: 191 PRARRVFTDPRRHTRHRTRRSVAPP 215
PRA R PRR R S++PP
Sbjct: 191 PRAPRPGDHPRRSPALRETPSLSPP 215
Score = 28.1 bits (61), Expect = 6.3
Identities = 35/147 (23%), Positives = 45/147 (30%), Gaps = 26/147 (17%)
Query: 96 AVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAA 155
A V AR + +G+ P + AS+ PG HPP+ A +
Sbjct: 10 AAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSR 69
Query: 156 TRREPPGNARQSRGVGAGKP-------------------EPQRRPPRGSRAARRPRARRV 196
R P R V AG P + + P G R RRP
Sbjct: 70 LRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPP 129
Query: 197 FTDPRRHTRHRTRRSV-------APPG 216
RH R R+V PPG
Sbjct: 130 LQPRSRHPHTRYPRAVPEATPLRPPPG 156
Score = 27.7 bits (60), Expect = 8.3
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Query: 139 APGP-QHPPTPPACSGAATRREP-PGNARQSRGVGAGKPEPQRRPPRGSRAARRPRARRV 196
AP P HP PA + P PG R G G PQ +PP A RR +
Sbjct: 193 APRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTT-PQPQPPPPPCATRREEDMAL 251
Query: 197 FTDPRRHTR 205
T R +R
Sbjct: 252 RTRDRTSSR 260
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 40.8 bits (94), Expect = 0.001
Identities = 52/159 (32%), Positives = 61/159 (38%), Gaps = 43/159 (27%)
Query: 56 GAGPGAGSAP--PGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLA-C------- 105
G G GA P PG AP RS P SR R+T G A GA AV C
Sbjct: 288 GVGSGAPGEPAEPGRARAP---RSAPSSREPRQTKRRVGSRARAGAGAVTGPCPAAAQGA 344
Query: 106 -----SARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPP-TPPACSGAATRRE 159
S R P+DG GA E P SAP P+ P +PPA + RR
Sbjct: 345 RGSWPSPRCLPSDG-GAREAPPT--------------SAPHPRRPAGSPPALADREGRRS 389
Query: 160 -PPGNARQSRGVG--------AGKPEPQRRPPRGSRAAR 189
P + Q + AGK ++R P RA R
Sbjct: 390 LVPQTSIQGQNFAQLSLARPWAGKRGHRQREPEALRALR 428
Score = 32.3 bits (72), Expect = 0.34
Identities = 54/221 (24%), Positives = 74/221 (33%), Gaps = 33/221 (14%)
Query: 17 PGSRPSSAVGEGSRVPG-RRLDEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTR 75
PGS ++A+ G PG RR G + G A G A PA R
Sbjct: 142 PGSTRAAALPGGRDKPGPRRPRAAPGARS-----GAAASVAAAGGTRLAQQAPFPAARCR 196
Query: 76 RSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGWAST 135
R G + AA ++ + G A P ++G A
Sbjct: 197 RRGAIRKPLHDV---------TAAAFIVLVELLFAITSGERAASAPRQESHNFAKGCAEF 247
Query: 136 FLSAPGPQHPPTPPACSGAATRREP---------PGNARQSRGVGAGKPEPQRRPPRGSR 186
+ S G + P P + R P P + GVG+G P P R
Sbjct: 248 YGS--GARAQPGGPCWAQGPPGRLPDPIPLPTRAPRTSAGLAGVGSGAPGEPAEPGR--- 302
Query: 187 AARRPRARRVFTDPRRHTRHRTRRSVAPPGCF---CPACSQ 224
AR PR+ +PR+ R R+ A G CPA +Q
Sbjct: 303 -ARAPRSAPSSREPRQTKRRVGSRARAGAGAVTGPCPAAAQ 342
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 40.8 bits (94), Expect = 0.001
Identities = 56/182 (30%), Positives = 66/182 (36%), Gaps = 17/182 (9%)
Query: 16 RPGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTR 75
R GSR G G+ P G G GR RGRG + AG G A +P
Sbjct: 73 RAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCHSPSCC 132
Query: 76 RSGPRSRTWRRTWCWTGDSAAVGAA-AVLACSA-----RLSPADGFGAEEGPLAHLEERS 129
RS S W R G A A+ A+L C A L A GA +
Sbjct: 133 RSS--SCAWHRWPQLRGREADPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQ 190
Query: 130 EGWASTFLSAPGPQ---HPPTP--PACSGAATRREPPGNARQSRGVG----AGKPEPQRR 180
S +A G + PPTP P G + P G AR R G G+ QR
Sbjct: 191 PQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGGAQRI 250
Query: 181 PP 182
PP
Sbjct: 251 PP 252
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 40.8 bits (94), Expect = 0.001
Identities = 53/181 (29%), Positives = 65/181 (35%), Gaps = 35/181 (19%)
Query: 60 GAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACS---ARLSPAD--- 113
G S+P G T + + RS+ T G+SAA A S +SP
Sbjct: 70 GESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPA 129
Query: 114 ----GFGAEEGPLAHLEERSEGWASTFLSAP---------GPQHPPTPPA---CSGAATR 157
FG ++ PL R GW +T P GP P PP C GA
Sbjct: 130 PRPKRFGGKQRPLW----RIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAA 185
Query: 158 ---REPPGNARQSRGVGAGKPEPQRRPPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAP 214
RE A+ R A PEP RR P R P A D R+RR+ P
Sbjct: 186 QLLREAAAAAQGLRAPAARLPEPTRRAP--GRPGCLPTAAAAAAD----ALWRSRRAPLP 239
Query: 215 P 215
P
Sbjct: 240 P 240
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 40.8 bits (94), Expect = 0.001
Identities = 53/181 (29%), Positives = 65/181 (35%), Gaps = 35/181 (19%)
Query: 60 GAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACS---ARLSPAD--- 113
G S+P G T + + RS+ T G+SAA A S +SP
Sbjct: 70 GESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPA 129
Query: 114 ----GFGAEEGPLAHLEERSEGWASTFLSAP---------GPQHPPTPPA---CSGAATR 157
FG ++ PL R GW +T P GP P PP C GA
Sbjct: 130 PRPKRFGGKQRPLW----RIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAA 185
Query: 158 ---REPPGNARQSRGVGAGKPEPQRRPPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAP 214
RE A+ R A PEP RR P R P A D R+RR+ P
Sbjct: 186 QLLREAAAAAQGLRAPAARLPEPTRRAP--GRPGCLPTAAAAAAD----ALWRSRRAPLP 239
Query: 215 P 215
P
Sbjct: 240 P 240
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 40.8 bits (94), Expect = 0.001
Identities = 53/181 (29%), Positives = 65/181 (35%), Gaps = 35/181 (19%)
Query: 60 GAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACS---ARLSPAD--- 113
G S+P G T + + RS+ T G+SAA A S +SP
Sbjct: 70 GESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPA 129
Query: 114 ----GFGAEEGPLAHLEERSEGWASTFLSAP---------GPQHPPTPPA---CSGAATR 157
FG ++ PL R GW +T P GP P PP C GA
Sbjct: 130 PRPKRFGGKQRPLW----RIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAA 185
Query: 158 ---REPPGNARQSRGVGAGKPEPQRRPPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAP 214
RE A+ R A PEP RR P R P A D R+RR+ P
Sbjct: 186 QLLREAAAAAQGLRAPAARLPEPTRRAP--GRPGCLPTAAAAAAD----ALWRSRRAPLP 239
Query: 215 P 215
P
Sbjct: 240 P 240
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 40.8 bits (94), Expect = 0.001
Identities = 50/200 (25%), Positives = 70/200 (35%), Gaps = 16/200 (8%)
Query: 20 RPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTRRSGP 79
RP G PG + +G +Q R +G+ G GP AGS P P+P + P
Sbjct: 460 RPPPQGGPPQPGPGPQR-QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQP 518
Query: 80 RSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSA 139
S+ T S V +AR + + GP A+ S
Sbjct: 519 ASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQ---------ATRQTSV 569
Query: 140 PGPQHPPTPPACSGAATRR----EPPGNARQSRGVGAGKPEPQRRPPRGSRAARRPRARR 195
GP P A G R+ +PPG A +R P P+ PP + RP
Sbjct: 570 SGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQP--RPSGPG 627
Query: 196 VFTDPRRHTRHRTRRSVAPP 215
P+ + + V PP
Sbjct: 628 PAGRPKPQLAQKPSQDVPPP 647
Score = 27.7 bits (60), Expect = 8.3
Identities = 56/225 (24%), Positives = 77/225 (34%), Gaps = 35/225 (15%)
Query: 2 GSSAPHPPIQALFDRPGSRPSSAVGE--GSRVPGR-----RLDEGGGVQGRWKNRGRGTY 54
G PP+Q G + S +G GS +P R + Q +G+G
Sbjct: 473 GPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQ 532
Query: 55 R---GAGPGAG-SAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLS 110
GPGA +A P +P+P R++GP T R +G + + A R
Sbjct: 533 SRPVAGGPGAPPAARPPASPSPQ-RQAGPPQAT--RQTSVSGPAPPKASGAPPGGQQRQG 589
Query: 111 PADGFGAEEGPLAHLEERSE----GWASTFL---SAPGPQHPPT------------PPAC 151
P GP + G +T S PGP P PPA
Sbjct: 590 PPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPAT 649
Query: 152 SGAATRREPPGNARQSRGVGAGKPEPQRRPPRGSRAARRPRARRV 196
+ A P N QS PEP PPR S + +A +
Sbjct: 650 AAAGGPPHPQLNKSQSLTNAFNLPEP--APPRPSLSQDEVKAETI 692
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 40.8 bits (94), Expect = 0.001
Identities = 50/200 (25%), Positives = 70/200 (35%), Gaps = 16/200 (8%)
Query: 20 RPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTRRSGP 79
RP G PG + +G +Q R +G+ G GP AGS P P+P + P
Sbjct: 460 RPPPQGGPPQPGPGPQR-QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQP 518
Query: 80 RSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSA 139
S+ T S V +AR + + GP A+ S
Sbjct: 519 ASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQ---------ATRQTSV 569
Query: 140 PGPQHPPTPPACSGAATRR----EPPGNARQSRGVGAGKPEPQRRPPRGSRAARRPRARR 195
GP P A G R+ +PPG A +R P P+ PP + RP
Sbjct: 570 SGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQP--RPSGPG 627
Query: 196 VFTDPRRHTRHRTRRSVAPP 215
P+ + + V PP
Sbjct: 628 PAGRPKPQLAQKPSQDVPPP 647
>gi|118200352 hypothetical protein LOC642273 [Homo sapiens]
Length = 321
Score = 40.8 bits (94), Expect = 0.001
Identities = 55/195 (28%), Positives = 70/195 (35%), Gaps = 30/195 (15%)
Query: 8 PPIQALFDRP--GSRPSSAVGEGSRVPGRRL--DEGGGVQGRWKNRGRGTY-RGAGPGA- 61
PP + L R +R A R RL D V+GR GRG G+GPGA
Sbjct: 10 PPNERLLPRDPAATRDPDAARPARRSAVERLAADRAKYVRGR-PGTGRGVASEGSGPGAI 68
Query: 62 -----GSAPPGETPAPYTRRSGPRSR-------TWRRTWCWTGDSAAVGAAAVLACSARL 109
PP PAP RR+ R +R+ + S A G A L
Sbjct: 69 KCPGNDPGPPARAPAPVARRAIARKPLRPDSLIIYRQKCEFVRGSGADGPRASLVKKLFQ 128
Query: 110 SPADGFGAEEGPLAHL-EERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSR 168
P G ++ P+ +E G T + PGP P P A R P +
Sbjct: 129 GP----GKDKAPVPRTGDEGKAGNPETVPTTPGPAADPATPETPAPAARSAAPSS----- 179
Query: 169 GVGAGKPEPQRRPPR 183
V A P P+ R R
Sbjct: 180 -VPAAPPGPEPRVVR 193
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 40.8 bits (94), Expect = 0.001
Identities = 44/162 (27%), Positives = 63/162 (38%), Gaps = 27/162 (16%)
Query: 38 EGGGVQGRWKNRGR----GTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGD 93
+G QG K +G G +G P G+ P G P P + GP + GD
Sbjct: 37 QGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQG--PPPPGKPQGPPPQ---------GD 85
Query: 94 SAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSG 153
+ + P G +GP A +S+ S P P PP G
Sbjct: 86 KSRSPRSPP---GKPQGPPPQGGKPQGPPAQGGSKSQSARSP------PGKPQGPPQQEG 136
Query: 154 AATRREPP---GNARQSRGVGAGKPEPQRRPPRGSRAARRPR 192
+ PP GN +Q + AG+P+ RPP+G R +R P+
Sbjct: 137 NNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 178
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 40.4 bits (93), Expect = 0.001
Identities = 39/148 (26%), Positives = 48/148 (32%), Gaps = 32/148 (21%)
Query: 52 GTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSP 111
G + AG PP PA + R G R R +W G+ G
Sbjct: 119 GPSAASSAAAGKTPPSRVPAEPSSRRGASKR--RESWRTDGERLRSGRGCA--------- 167
Query: 112 ADGFGAEEGPLAHLEERSEGWASTFLSA--------PG----PQHPPTPPACSGAATR-- 157
GA GP A L+ R EGW + PG P PP ++
Sbjct: 168 ----GAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSPGPPLQRSSSLNET 223
Query: 158 ---REPPGNARQSRGVGAGKPEPQRRPP 182
R PPG A + G G P R P
Sbjct: 224 LRGRRPPGPAPAAAGATRGTAAPPGRDP 251
Score = 28.9 bits (63), Expect = 3.7
Identities = 53/209 (25%), Positives = 67/209 (32%), Gaps = 41/209 (19%)
Query: 8 PPIQALFDRPGSRPSSAVGEGSRVPGRRLDEGGGVQGR--------------WKNR---G 50
PP + + R +S E R G RL G G G W G
Sbjct: 132 PPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVG 191
Query: 51 RGTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLS 110
R R PG S +P P +RS + T R AA GA A
Sbjct: 192 RHEARRLKPGV-SVSSSLSPGPPLQRSSSLNETLRGRRPPGPAPAAAGATRGTAAPPGRD 250
Query: 111 PA----DGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNARQ 166
P+ D A PLA + W HP G + G +R
Sbjct: 251 PSAWFLDSASACPTPLA-----ARSW-----------HPFVANKLCGRG-KGAGGGASRP 293
Query: 167 SRGVGAGKPEPQRRPPRGSRAARRPRARR 195
GVG+G+ PRG R + R R R+
Sbjct: 294 KEGVGSGRARAWE--PRGGRESGRSRRRK 320
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.7 bits (91), Expect = 0.002
Identities = 49/197 (24%), Positives = 61/197 (30%), Gaps = 31/197 (15%)
Query: 3 SSAPHPPIQALFDRPGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAG 62
S+ P PP + S + E S RR GGG+Q P +
Sbjct: 186 SARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR--------------PASR 231
Query: 63 SAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPL 122
S TP RSGP +R R G A+ D A GPL
Sbjct: 232 SLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL-GPL 290
Query: 123 AHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQR--- 179
+ S+ L+ P P PP+P A T PP G P Q
Sbjct: 291 S----------SSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 340
Query: 180 ---RPPRGSRAARRPRA 193
PP A P+A
Sbjct: 341 FLPSPPLSPLATPPPQA 357
Score = 29.6 bits (65), Expect = 2.2
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 8/58 (13%)
Query: 133 ASTFLSAPGPQHPPTPPACSGAATRREPP--------GNARQSRGVGAGKPEPQRRPP 182
A L+AP Q PP+PPA R PP R + + G P P R P
Sbjct: 523 APPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 580
Score = 27.7 bits (60), Expect = 8.3
Identities = 37/132 (28%), Positives = 44/132 (33%), Gaps = 16/132 (12%)
Query: 59 PGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADG---- 114
P A + PP + P P S P S T A A AV A SP
Sbjct: 358 PPALALPPLQAP-PSPPASPPLSPLA------TPSPQAPNALAVHLLQAPFSPPPSPPVQ 410
Query: 115 --FGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNA---RQSRG 169
F P A L+AP Q PP+PPA + PP A +
Sbjct: 411 APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP 470
Query: 170 VGAGKPEPQRRP 181
+ KP PQ P
Sbjct: 471 LQLAKPPPQAPP 482
>gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo
sapiens]
Length = 230
Score = 39.7 bits (91), Expect = 0.002
Identities = 45/156 (28%), Positives = 52/156 (33%), Gaps = 34/156 (21%)
Query: 34 RRLDEGGGVQGRWKNRG-RGTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTG 92
RR G RW + G G+ G GPG+ PP PAP R W G
Sbjct: 41 RRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAP--------PPGLREAWVGGG 92
Query: 93 DSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACS 152
R+SPA G G GPLA L R AP P A
Sbjct: 93 -------------GGRVSPAPGAGLTRGPLAPLGRRRH--------AP-RWEPAAAGALL 130
Query: 153 GAATRREPPGNARQSRGVGAGKP---EPQRRPPRGS 185
G +R G G G P EP+R + S
Sbjct: 131 GPMVALSQRDCSRDRDGAGRGAPASFEPRRGREKAS 166
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 39.7 bits (91), Expect = 0.002
Identities = 24/70 (34%), Positives = 30/70 (42%)
Query: 3 SSAPHPPIQALFDRPGSRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAG 62
++AP PP + PG +P S G G R GGG G + RG G G
Sbjct: 158 TAAPSPPRRLPPPPPGEQPPSGSGHGRPPGARPPHRGGGRGGGGGDAAAPPARGGGGGGK 217
Query: 63 SAPPGETPAP 72
+ PPG AP
Sbjct: 218 ARPPGGGAAP 227
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/159 (23%), Positives = 57/159 (35%), Gaps = 38/159 (23%)
Query: 40 GGVQGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGA 99
GG + R G +G P G+ P G P P + GP
Sbjct: 290 GGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP-GKPQGP-------------------- 328
Query: 100 AAVLACSARLSPADGFGAEEGPLAHLEERS---EGWASTFLSAPGPQHPPTPPACSGAAT 156
P G +GP + + +G + + + P P PP G
Sbjct: 329 -----------PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNP 377
Query: 157 RREPP---GNARQSRGVGAGKPEPQRRPPRGSRAARRPR 192
+ PP GN +Q + AG+P+ RPP+G R +R P+
Sbjct: 378 QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 416
Score = 36.2 bits (82), Expect = 0.023
Identities = 42/187 (22%), Positives = 64/187 (34%), Gaps = 19/187 (10%)
Query: 40 GGVQGRWKNRGRGTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGA 99
GG Q + G +G P G+ P G P P + GP + ++
Sbjct: 187 GGNQPQGPPPPPGKPQGPPPQGGNKPQG--PPPPGKPQGPPPQGDNKSQSARSPPGKPQG 244
Query: 100 AAVLACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATR-- 157
+ P G +GP + +G P P P PP G+ +R
Sbjct: 245 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG-------PPPPGKPQGPPPQGGSKSRSS 297
Query: 158 REPPGNARQSRGVGAGKPE--------PQRRPPRGSRAARRPRARRVFTDPRRHTRHRTR 209
R PPG + G +P+ PQ PP+G + P P ++R
Sbjct: 298 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSR 357
Query: 210 RSVAPPG 216
+ +PPG
Sbjct: 358 SARSPPG 364
Score = 34.3 bits (77), Expect = 0.089
Identities = 42/175 (24%), Positives = 61/175 (34%), Gaps = 40/175 (22%)
Query: 52 GTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSP 111
G +GA P G+ P G P+P + GP + G + G P
Sbjct: 34 GNPQGAPPQGGNKPQGP-PSPPGKPQGPPPQ---------GGNQPQG------------P 71
Query: 112 ADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATR--REPPGNARQSRG 169
G +GP + +G P P P P G +R R PPG +
Sbjct: 72 PPPPGKPQGPPPQGGNKPQG--------PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPP 123
Query: 170 VGAGKPE--------PQRRPPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAPPG 216
G +P+ PQ PP+G + P P +++R S +PPG
Sbjct: 124 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPG 178
Score = 31.6 bits (70), Expect = 0.57
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 140 PGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPE--------PQRRPPRGSRAARRP 191
PG P P + + + R PPG + G +P+ PQ PP+G + P
Sbjct: 156 PGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 215
Query: 192 RARRVFTDPRRHTRHRTRRSVAPPG 216
P ++++ + +PPG
Sbjct: 216 PPPGKPQGPPPQGDNKSQSARSPPG 240
Score = 28.1 bits (61), Expect = 6.3
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 14/86 (16%)
Query: 116 GAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKP 175
G +GP + +S + S PG P P + PPG + G KP
Sbjct: 157 GKPQGPPPQGDNKSR----SSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 212
Query: 176 E-------PQRRPPRG---SRAARRP 191
+ PQ PP+G S++AR P
Sbjct: 213 QGPPPPGKPQGPPPQGDNKSQSARSP 238
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 39.7 bits (91), Expect = 0.002
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 116 GAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPP---GNARQSRGVGA 172
G +GP A +S+ S P P PP G + PP GN +Q + A
Sbjct: 258 GKPQGPPAQGGSKSQSARSP------PGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA 311
Query: 173 GKPEPQRRPPRGSRAARRPR 192
G+P+ RPP+G R +R P+
Sbjct: 312 GQPQGPPRPPQGGRPSRPPQ 331
Score = 28.9 bits (63), Expect = 3.7
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 142 PQHPPTP-----PACSGAATR--REPPGNARQSRGVGAGKPE--------PQRRPPR-GS 185
PQ PP P P G +R R PPG + G +P+ PQ PP+ G+
Sbjct: 68 PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 127
Query: 186 RAARRPRARRVFTDPRRHTRHRTRRSVAPPG 216
R P + P + + R+ RS PPG
Sbjct: 128 RPQGPPPPGKPQGPPPQGDKSRSPRS--PPG 156
Score = 28.5 bits (62), Expect = 4.9
Identities = 43/191 (22%), Positives = 60/191 (31%), Gaps = 46/191 (24%)
Query: 17 PGSRPSSAVGEGSRVPGRRLDEG--------GGVQGRWKNRGRGTYRGAGPGAGSAPPGE 68
P +P +G + R G GG Q + G +G P G+ P G
Sbjct: 73 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQG- 131
Query: 69 TPAPYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEER 128
P P + GP + GD + SP G +GP +
Sbjct: 132 -PPPPGKPQGPPPQ---------GDKSR-------------SPRSPPGKPQGPPPQGGNQ 168
Query: 129 SEGWASTFLSAPGPQHPPTPPACSGAATRREPPGNARQ--------SRGVGAGKPEPQRR 180
+G P P P PP G + PP Q SR + +PQ
Sbjct: 169 PQG------PPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGP 222
Query: 181 PPRGSRAARRP 191
PP+G + P
Sbjct: 223 PPQGGNQPQGP 233
Score = 28.1 bits (61), Expect = 6.3
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 15/90 (16%)
Query: 142 PQHPPTP-------PACSGAATRREPPGNARQSRGVGAGKPE--------PQRRPPRGSR 186
PQ PP P P + + + PPG + G +P+ PQ PP+G
Sbjct: 190 PQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 249
Query: 187 AARRPRARRVFTDPRRHTRHRTRRSVAPPG 216
+ P P +++ + +PPG
Sbjct: 250 KPQGPPPPGKPQGPPAQGGSKSQSARSPPG 279
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 39.7 bits (91), Expect = 0.002
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 116 GAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACSGAATRREPP---GNARQSRGVGA 172
G +GP A +S+ S P P PP G + PP GN +Q + A
Sbjct: 125 GKPQGPPAQGGSKSQSARSP------PGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA 178
Query: 173 GKPEPQRRPPRGSRAARRPR 192
G+P+ RPP+G R +R P+
Sbjct: 179 GQPQGPPRPPQGGRPSRPPQ 198
Score = 29.3 bits (64), Expect = 2.8
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 142 PQHPPTPPACSGAATRREPPGNARQSRGVGAGKP----EPQRRPPRGSRAARRPRARRVF 197
PQ PP P G + + + R G G P +PQ PP+G + P
Sbjct: 68 PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKP 127
Query: 198 TDPRRHTRHRTRRSVAPPG 216
P +++ + +PPG
Sbjct: 128 QGPPAQGGSKSQSARSPPG 146
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,776,200
Number of Sequences: 37866
Number of extensions: 942856
Number of successful extensions: 9780
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 833
Number of HSP's that attempted gapping in prelim test: 7379
Number of HSP's gapped (non-prelim): 2897
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.