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Search of human proteins with 118150654
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118150654 non-protein coding RNA 153 isoform 1 [Homo
sapiens]
(673 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118150654 non-protein coding RNA 153 isoform 1 [Homo sapiens] 1341 0.0
gi|247301318 non-protein coding RNA 153 isoform 2 [Homo sapiens] 1133 0.0
gi|247301334 non-protein coding RNA 153 isoform 3 [Homo sapiens] 1074 0.0
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 49 2e-05
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 45 2e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 44 4e-04
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 43 8e-04
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 43 8e-04
gi|54633319 PDZ domain-containing guanine nucleotide exchange fa... 43 0.001
gi|221219020 NYD-SP11 protein [Homo sapiens] 42 0.002
gi|58331189 T-cell lymphoma invasion and metastasis 2 isoform b ... 42 0.002
gi|58331187 T-cell lymphoma invasion and metastasis 2 isoform a ... 42 0.002
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 41 0.003
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 41 0.003
gi|148806891 hypothetical protein LOC54906 [Homo sapiens] 40 0.007
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 40 0.009
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 40 0.009
gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens] 39 0.012
gi|54633315 deoxynucleotidyltransferase, terminal, interacting p... 39 0.016
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 39 0.016
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 39 0.016
gi|224586823 coiled-coil domain containing 110 isoform b [Homo s... 39 0.016
gi|22749515 coiled-coil domain containing 110 isoform a [Homo sa... 39 0.016
gi|34996489 pleckstrin homology domain interacting protein [Homo... 39 0.020
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 39 0.020
gi|124249396 coiled-coil domain containing 30 [Homo sapiens] 38 0.035
gi|4505257 moesin [Homo sapiens] 38 0.035
gi|21396500 HIRA interacting protein 3 [Homo sapiens] 38 0.035
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 37 0.045
gi|190194423 SPARC-like 1 [Homo sapiens] 37 0.045
>gi|118150654 non-protein coding RNA 153 isoform 1 [Homo sapiens]
Length = 673
Score = 1341 bits (3471), Expect = 0.0
Identities = 673/673 (100%), Positives = 673/673 (100%)
Query: 1 MSRTLASAVPLSSPDYYERLGQLQHGLRDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLK 60
MSRTLASAVPLSSPDYYERLGQLQHGLRDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLK
Sbjct: 1 MSRTLASAVPLSSPDYYERLGQLQHGLRDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLK 60
Query: 61 NYLKEICESEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKD 120
NYLKEICESEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKD
Sbjct: 61 NYLKEICESEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKD 120
Query: 121 SLGLKEELTDEDREKVAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFSTEHKSP 180
SLGLKEELTDEDREKVAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFSTEHKSP
Sbjct: 121 SLGLKEELTDEDREKVAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFSTEHKSP 180
Query: 181 QPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGEKMPVTA 240
QPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGEKMPVTA
Sbjct: 181 QPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGEKMPVTA 240
Query: 241 SVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDLKCDSSSGSE 300
SVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDLKCDSSSGSE
Sbjct: 241 SVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDLKCDSSSGSE 300
Query: 301 GEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLAHREPKSQKP 360
GEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLAHREPKSQKP
Sbjct: 301 GEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLAHREPKSQKP 360
Query: 361 FRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKLIHAEQER 420
FRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKLIHAEQER
Sbjct: 361 FRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKLIHAEQER 420
Query: 421 VALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVK 480
VALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVK
Sbjct: 421 VALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVK 480
Query: 481 EEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVS 540
EEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVS
Sbjct: 481 EEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVS 540
Query: 541 SGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGLNIGS 600
SGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGLNIGS
Sbjct: 541 SGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGLNIGS 600
Query: 601 GAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNALWDESDDSNSEIEAALRP 660
GAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNALWDESDDSNSEIEAALRP
Sbjct: 601 GAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNALWDESDDSNSEIEAALRP 660
Query: 661 RNHNTDDSDDFYD 673
RNHNTDDSDDFYD
Sbjct: 661 RNHNTDDSDDFYD 673
>gi|247301318 non-protein coding RNA 153 isoform 2 [Homo sapiens]
Length = 570
Score = 1133 bits (2931), Expect = 0.0
Identities = 568/570 (99%), Positives = 570/570 (100%)
Query: 104 LKLEYETQIKKMLCSKDSLGLKEELTDEDREKVAVHEGINSGTAMSRGLYQPATIFMGRQ 163
++LEYETQIKKMLCSKDSLGLKEELTDEDREKVAVHEGINSGTAMSRGLYQPATIFMGRQ
Sbjct: 1 MQLEYETQIKKMLCSKDSLGLKEELTDEDREKVAVHEGINSGTAMSRGLYQPATIFMGRQ 60
Query: 164 MSAILSMRDFSTEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDN 223
MSAILSMRDFSTEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDN
Sbjct: 61 MSAILSMRDFSTEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDN 120
Query: 224 IDGKASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLS 283
IDGKASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLS
Sbjct: 121 IDGKASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLS 180
Query: 284 PENRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPW 343
PENRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPW
Sbjct: 181 PENRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPW 240
Query: 344 EGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKME 403
EGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKME
Sbjct: 241 EGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKME 300
Query: 404 GEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRA 463
GEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRA
Sbjct: 301 GEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRA 360
Query: 464 QVGQHVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEA 523
QVGQHVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEA
Sbjct: 361 QVGQHVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEA 420
Query: 524 KPAVWLNSVPTREQEVSSGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRF 583
KPAVWLNSVPTREQEVSSGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRF
Sbjct: 421 KPAVWLNSVPTREQEVSSGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRF 480
Query: 584 QKTDASVSHLSGLNIGSGAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNAL 643
QKTDASVSHLSGLNIGSGAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNAL
Sbjct: 481 QKTDASVSHLSGLNIGSGAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNAL 540
Query: 644 WDESDDSNSEIEAALRPRNHNTDDSDDFYD 673
WDESDDSNSEIEAALRPRNHNTDDSDDFYD
Sbjct: 541 WDESDDSNSEIEAALRPRNHNTDDSDDFYD 570
>gi|247301334 non-protein coding RNA 153 isoform 3 [Homo sapiens]
Length = 540
Score = 1074 bits (2777), Expect = 0.0
Identities = 538/539 (99%), Positives = 539/539 (100%)
Query: 135 KVAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFSTEHKSPQPTKNFSIPDPHSH 194
+VAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFSTEHKSPQPTKNFSIPDPHSH
Sbjct: 2 QVAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFSTEHKSPQPTKNFSIPDPHSH 61
Query: 195 RQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGEKMPVTASVLSEEEQTHCLEI 254
RQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGEKMPVTASVLSEEEQTHCLEI
Sbjct: 62 RQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGEKMPVTASVLSEEEQTHCLEI 121
Query: 255 GSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDLKCDSSSGSEGEILTREHIEVEEK 314
GSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDLKCDSSSGSEGEILTREHIEVEEK
Sbjct: 122 GSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDLKCDSSSGSEGEILTREHIEVEEK 181
Query: 315 RASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWST 374
RASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWST
Sbjct: 182 RASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWST 241
Query: 375 SSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTL 434
SSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTL
Sbjct: 242 SSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTL 301
Query: 435 SSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEATALLRKALTEE 494
SSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEATALLRKALTEE
Sbjct: 302 SSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEATALLRKALTEE 361
Query: 495 CGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVAA 554
CGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVAA
Sbjct: 362 CGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVAA 421
Query: 555 DIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGLNIGSGAFETKTANKIASE 614
DIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGLNIGSGAFETKTANKIASE
Sbjct: 422 DIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGLNIGSGAFETKTANKIASE 481
Query: 615 ASFSSSEGSPLSRHENKKKPVINLKSNALWDESDDSNSEIEAALRPRNHNTDDSDDFYD 673
ASFSSSEGSPLSRHENKKKPVINLKSNALWDESDDSNSEIEAALRPRNHNTDDSDDFYD
Sbjct: 482 ASFSSSEGSPLSRHENKKKPVINLKSNALWDESDDSNSEIEAALRPRNHNTDDSDDFYD 540
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 48.5 bits (114), Expect = 2e-05
Identities = 91/505 (18%), Positives = 178/505 (35%), Gaps = 39/505 (7%)
Query: 172 DFSTEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQ 231
D S + S + S S ++ SSN +DS S+D+ + SD+ D K+
Sbjct: 570 DSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSS--DSSDSSDSKSDSS 627
Query: 232 IGEKMPVTASVLSEEEQTHCLEIGSNT-RHGKSNLSEGKKSAELNSPLRERLSPENRTTD 290
E + S+ ++ + N+ SN S S++ + S ++ +
Sbjct: 628 KSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSS 687
Query: 291 LKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHL 350
DSS S E S S S+ +S N S + S S
Sbjct: 688 DSSDSSDSSNS----------SESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDS 737
Query: 351 AHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEA 410
++ S + +S +S+ S S D + D ++
Sbjct: 738 SNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDS 797
Query: 411 LKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVA 470
+ + + + + +S DS S ++ + + SD + G
Sbjct: 798 SNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSD---SSDGSDSD 854
Query: 471 TLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLN 530
+ D+S +++ + + + S S+ESS S S + NS ++ +
Sbjct: 855 SSNRSDSSNSSDSSDSSDSSNSSDSSDSS--DSNESSNSSDSSDSSNSSDSDSS-----D 907
Query: 531 SVPTREQEVSSGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASV 590
S + + SS D S+ N + + D++N +++ ++
Sbjct: 908 SSNSSDSSDSSNSSDSSESSNSS--------------DNSNSSDSSNSSDSSDSSDSSNS 953
Query: 591 SHLSGLNIGSGAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNALWDESD-- 648
S S + S + ++ +N S S +SS+ S S + + S+ D SD
Sbjct: 954 SDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1013
Query: 649 DSNSEIEAALRPRNHNTDDSDDFYD 673
DS++ +++ + N+ DS D D
Sbjct: 1014 DSSNSSDSSNSSDSSNSSDSSDSSD 1038
Score = 45.8 bits (107), Expect = 1e-04
Identities = 89/505 (17%), Positives = 176/505 (34%), Gaps = 18/505 (3%)
Query: 172 DFSTEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQ 231
D S S + + D ++ SSN +DS S+D+ N SD+ + S
Sbjct: 775 DSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSD 834
Query: 232 IGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDL 291
+ S S + + S+ R SN S+ S++ ++ S ++ +
Sbjct: 835 SSNSSDSSDSSDSSDGS----DSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSN 890
Query: 292 KCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLA 351
DSS S + + + +S S+ ES N S SD
Sbjct: 891 SSDSSDSSN----SSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSD--- 943
Query: 352 HREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEAL 411
S S SSD + S S D + + + D ++
Sbjct: 944 --SSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSS 1001
Query: 412 KLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVAT 471
+ + + + S + +SS ++ + + + DS ++
Sbjct: 1002 NSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSS 1061
Query: 472 LKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSI-LNDNSGIKEAKPAVWLN 530
+ + + + +E + +SS+SS S S +D+S ++ + +
Sbjct: 1062 DSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDS--SD 1119
Query: 531 SVPTREQEVSSGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASV 590
S + + SS D S N + +E+ ++ +++ + + +D+S
Sbjct: 1120 SSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSN 1179
Query: 591 SHLSGLNIGSGAFETKTANKIASEASFS--SSEGSPLSRHENKKKPVINLKSNALWDESD 648
S S + S + + +S++S S SS+ S S + + SN D SD
Sbjct: 1180 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSD 1239
Query: 649 DSNSEIEAALRPRNHNTDDSDDFYD 673
S+S + + ++D SD D
Sbjct: 1240 SSDSSDSSNSSDSSDSSDSSDSTSD 1264
Score = 44.3 bits (103), Expect = 4e-04
Identities = 83/500 (16%), Positives = 182/500 (36%), Gaps = 26/500 (5%)
Query: 174 STEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQ----CLNKSDNIDGKAS 229
S++ S + N D + ++ SS+ +DS +S+D+ + SD+ + S
Sbjct: 642 SSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSES 701
Query: 230 LQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTT 289
+ +S S+ ++ + S+ S+ S S++ + S ++ +
Sbjct: 702 SDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDS 761
Query: 290 DLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDH 349
DSS S+ + + +S S+ +S N S SD
Sbjct: 762 SNSSDSSDSSDSSDSS------DSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDS 815
Query: 350 LAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIE 409
S + + S SSD + S D + N + D
Sbjct: 816 SDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSN 875
Query: 410 ALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHV 469
+ + + ++ + + +S DS+ S+N+ + SD +
Sbjct: 876 SSDSSDSSDSNESSNSSDSS--DSSNSSDSDSSDSSNS-------SDSSDSSNSSDSSES 926
Query: 470 ATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWL 529
+ ++ NS + + + ++ + +SS+SS S S +++S ++
Sbjct: 927 SNSSDNSNS-SDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSS----- 980
Query: 530 NSVPTREQEVSSGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDAS 589
NS + + SS D S N + +++ ++ +++ + + +D+S
Sbjct: 981 NSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSS 1040
Query: 590 VSHLSGLNIGSGAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNALWDESDD 649
S S + S + + +S++S SS+ S S + + + S+ D SD
Sbjct: 1041 DSSDSSDSSDSSDSSNSSDSSDSSDSS-DSSDSSDSSDSSDSSESSDSSDSSNSSDSSDS 1099
Query: 650 SNSEIEAALRPRNHNTDDSD 669
S+S + + ++D SD
Sbjct: 1100 SDSSDSSDSSDSSDSSDSSD 1119
Score = 41.2 bits (95), Expect = 0.003
Identities = 85/496 (17%), Positives = 174/496 (35%), Gaps = 22/496 (4%)
Query: 174 STEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIG 233
S++ + + S S ++ S + +DS + +D+ N SD+ D S
Sbjct: 601 SSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSS 660
Query: 234 EKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDLKC 293
+ S S + S+ S+ S+ S+E + S + ++D
Sbjct: 661 NSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSN 720
Query: 294 DSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLAHR 353
+SS S+ + +S S+ +S + + S SD +
Sbjct: 721 SNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSD--SSD 778
Query: 354 EPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKL 413
S + S SSD + S D S N D ++
Sbjct: 779 SSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDS--- 835
Query: 414 IHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLK 473
++ + + + + DS S ++ + + SD + + +
Sbjct: 836 SNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSS 895
Query: 474 EHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVP 533
+ NS +++ + + + S SSESS S +DNS ++ NS
Sbjct: 896 DSSNSSDSDSSDSSNSSDSSDSSNSS--DSSESSNS-----SDNSNSSDSS-----NSSD 943
Query: 534 TREQEVSSGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHL 593
+ + SS D S + + +++ + + D+++ +++ +D+S S
Sbjct: 944 SSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDS----SDSSDSSD 999
Query: 594 SGLNIGSGAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNALWDESDDSNSE 653
S N + + +++ S S +SS+ S S + + S+ D SD SNS
Sbjct: 1000 SS-NSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSS 1058
Query: 654 IEAALRPRNHNTDDSD 669
+ + ++D SD
Sbjct: 1059 DSSDSSDSSDSSDSSD 1074
Score = 38.9 bits (89), Expect = 0.016
Identities = 88/504 (17%), Positives = 179/504 (35%), Gaps = 17/504 (3%)
Query: 174 STEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIG 233
S++ + + N S S + SSN +DS S+D+ N SD+ D S
Sbjct: 794 SSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSS--NSSDSSDSSDSSDGS 851
Query: 234 EKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDLK- 292
+ S S + SN+ S+ S+ +S+ + S ++ ++D
Sbjct: 852 DSDSSNRSDSSNSSDSSDSSDSSNSSDS-SDSSDSNESSNSSDSSDSSNSSDSDSSDSSN 910
Query: 293 -CDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLA 351
DSS S + + +S + S+ +S N S SD
Sbjct: 911 SSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSD 970
Query: 352 HREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEAL 411
S + S SSD + S + D S + + + +
Sbjct: 971 SNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSD----SSDSSDSSDSSNSSDSSNSSD 1026
Query: 412 KLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVAT 471
++ + S++ + + S DS S ++ + + SD + +
Sbjct: 1027 SSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSD 1086
Query: 472 LKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNS 531
+ NS ++ + S+ S S+ S S +D+S ++ + +S
Sbjct: 1087 SSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSS--DS 1144
Query: 532 VPTREQEVSSGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVS 591
+ E SS D S + + +++ ++ +++ + + +D+S S
Sbjct: 1145 SDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDS 1204
Query: 592 HLSGLNIGSGAFETKTANKIASEASFS-----SSEGSPLSRHENKKKPVINL-KSNALWD 645
S + S + + +S++S S SS+ S S N + S++ D
Sbjct: 1205 SDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSD 1264
Query: 646 ESDDSNSEIEAALRPRNHNTDDSD 669
+D+S+S+ ++ N + DSD
Sbjct: 1265 SNDESDSQSKSGNGNNNGSDSDSD 1288
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 45.4 bits (106), Expect = 2e-04
Identities = 80/370 (21%), Positives = 143/370 (38%), Gaps = 38/370 (10%)
Query: 300 EGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLAHREPKSQK 359
EG++ RE E+EE + + + E E E K HS E
Sbjct: 309 EGKVAQREE-ELEE--TGNQHNDVEIEEAGEEEEKEIAIVHSDAE--------------- 350
Query: 360 PFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPN-PGGKMEGEDGIEALKLIHAEQ 418
K QEEEE+ ++ + + E+ + ES + Q + P M+ + +E +K + A+Q
Sbjct: 351 ---KEQEEEEQK----QEMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVENVKHVIADQ 403
Query: 419 ERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVG-QHVATLK-EHD 476
E + + ++ P + S P E PD + G ++V+ L E +
Sbjct: 404 EVMETNRVESV------EPSENEASKELEPEMEFEIEPDKECKSLSPGKENVSALDMEKE 457
Query: 477 NSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTRE 536
+ KEE + + + +S S S P + + E L P
Sbjct: 458 SEEKEEKESEPQPEPVAQPQPQSQPQLQLQSQSQPVLQSQPPSQPEDLSLAVLQPTPQVT 517
Query: 537 QEVSSGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGL 596
QE G +K+ + +TE +L ++ ++T+ R + + + S
Sbjct: 518 QE--QGHLLPERKDFPVESVKLTEVPVEPVL--TVHPESKSKTKTRSRSRGRARNKTSKS 573
Query: 597 NIGSGAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNALWDESDDSNSEIEA 656
S + + +++ +S + SSS GS SR + + S+ S S+SE +
Sbjct: 574 RSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRS 633
Query: 657 ALRPRNHNTD 666
R R HN D
Sbjct: 634 RSRGRGHNRD 643
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 44.3 bits (103), Expect = 4e-04
Identities = 65/289 (22%), Positives = 117/289 (40%), Gaps = 44/289 (15%)
Query: 225 DGKASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERL-- 282
+ K+ ++ K P A +EE E+ S + E K E SP +E
Sbjct: 515 EAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKS 574
Query: 283 -----SPENRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQ 337
SPE + K ++ S +E + + V+E+ SP + PV E E K
Sbjct: 575 PAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKE----EAKSPA 630
Query: 338 EKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPN 397
E SP + S + +++ P + E+EE+ +SPE +
Sbjct: 631 EVKSPEKAKSP----TKEEAKSPEKAKSPEKEEA------------------KSPEKAKS 668
Query: 398 PGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPD 457
P K E + +A + AE + + K+ + + SP+ K +P +E ++P+
Sbjct: 669 P-VKAEAKSPEKAKSPVKAEAK--SPEKAKSPVKEEAKSPEKAK-----SPVKEEAKSPE 720
Query: 458 SDVPRAQVGQHVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSES 506
++ V + T ++ + VKEEA + KA + E + + S E+
Sbjct: 721 K--AKSPVKEEAKTPEKAKSPVKEEAKS-PEKAKSPEKAKTLDVKSPEA 766
Score = 43.9 bits (102), Expect = 5e-04
Identities = 59/274 (21%), Positives = 110/274 (40%), Gaps = 29/274 (10%)
Query: 234 EKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPENRT-TDLK 292
E+ VT V EEE+ E G G+ +EG + + P E SPE + +K
Sbjct: 462 EETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVK 521
Query: 293 CDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYC----ESENKWSQEKHSPWEGVSD 348
++ S +E + +E + + SP + P E E+++ +E SP E S
Sbjct: 522 EEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSP 581
Query: 349 HLAH----------REPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNP 398
A E KS + + +EE +S + + ++ ++SPE +P
Sbjct: 582 EKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSP 641
Query: 399 GGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKE---------SSTNAPT 449
K E + +A ++E + K+ + SP+ K +P
Sbjct: 642 -TKEEAKSPEKAKS--PEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPV 698
Query: 450 REPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEA 483
+E ++P+ ++ V + + ++ + VKEEA
Sbjct: 699 KEEAKSPEK--AKSPVKEEAKSPEKAKSPVKEEA 730
Score = 42.0 bits (97), Expect = 0.002
Identities = 60/286 (20%), Positives = 110/286 (38%), Gaps = 27/286 (9%)
Query: 235 KMPVTASVLSEEE-QTHCLEIGSNTRHGKSNLSEGKKSAE-LNSPLRERL-------SPE 285
K PV S E+ ++ E + KS + E K+ E SP++E SPE
Sbjct: 695 KSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPE 754
Query: 286 N-RTTDLKC--------DSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWS 336
+T D+K + + + + V+E+ SP + P+ E ++ K
Sbjct: 755 KAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEI 814
Query: 337 QEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEP-- 394
+K V + +E K ++P +K +EE+ + + + S E+ E+P+P
Sbjct: 815 PKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKV 874
Query: 395 --QPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREP 452
+ P + E +EA K AE ++ + EK + D++ + T +EP
Sbjct: 875 EEKKEPAVEKPKESKVEA-KKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEP 933
Query: 453 ----GQTPDSDVPRAQVGQHVATLKEHDNSVKEEATALLRKALTEE 494
+ P + + KE EE KA ++
Sbjct: 934 DDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDD 979
Score = 33.1 bits (74), Expect = 0.86
Identities = 40/199 (20%), Positives = 76/199 (38%), Gaps = 6/199 (3%)
Query: 346 VSDHLAHREPKSQKPFRKMQEE----EEESWSTSSDLTISISEDDLILESPEPQPNPGGK 401
VS H+ + + K K ++E EE++ T ++ E+ E + G +
Sbjct: 432 VSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEE 491
Query: 402 MEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVP 461
E E G E K AE+ K+ + + SP +E +S + P + +
Sbjct: 492 EEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSP-AEAKSPEKEEAKSPAEVKSPEKA 550
Query: 462 RAQVGQHVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIK 521
++ + + E + KEEA + + + E + A ++S S S +K
Sbjct: 551 KSPAKEEAKSPPEAKSPEKEEAKS-PAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVK 609
Query: 522 EAKPAVWLNSVPTREQEVS 540
E + P +E+ S
Sbjct: 610 EEAKSPAEAKSPVKEEAKS 628
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 43.1 bits (100), Expect = 8e-04
Identities = 58/278 (20%), Positives = 113/278 (40%), Gaps = 23/278 (8%)
Query: 330 ESENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLIL 389
E+E + K SP + + + E + ++ + +EEEE+ + S SE +
Sbjct: 500 EAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSS 559
Query: 390 ESPEPQPNPG---GKMEGEDGIEALKLIHAEQERVALSTEKNCILQT-LSSPDSEKESST 445
E E + G + EGE+ EA + E++ ++T++ + + P+ K
Sbjct: 560 EKEEGEQEEGETEAEAEGEEA-EAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVP 618
Query: 446 NAPTREPGQTPDSDVPRAQVGQH---VATLKEHDNS------VKEEATALLRKALTEECG 496
+P E G++P P + G+ + ++E S V+E+ + + K+ EE
Sbjct: 619 KSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKA 678
Query: 497 R----RSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKS----- 547
+ +S + ++S + KE K A V +E++ K
Sbjct: 679 KSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPV 738
Query: 548 KKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQK 585
K+E VA + IT++ L K+ + Q E +K
Sbjct: 739 KEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEK 776
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 43.1 bits (100), Expect = 8e-04
Identities = 58/278 (20%), Positives = 113/278 (40%), Gaps = 23/278 (8%)
Query: 330 ESENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLIL 389
E+E + K SP + + + E + ++ + +EEEE+ + S SE +
Sbjct: 124 EAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSS 183
Query: 390 ESPEPQPNPG---GKMEGEDGIEALKLIHAEQERVALSTEKNCILQT-LSSPDSEKESST 445
E E + G + EGE+ EA + E++ ++T++ + + P+ K
Sbjct: 184 EKEEGEQEEGETEAEAEGEEA-EAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVP 242
Query: 446 NAPTREPGQTPDSDVPRAQVGQH---VATLKEHDNS------VKEEATALLRKALTEECG 496
+P E G++P P + G+ + ++E S V+E+ + + K+ EE
Sbjct: 243 KSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKA 302
Query: 497 R----RSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKS----- 547
+ +S + ++S + KE K A V +E++ K
Sbjct: 303 KSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPV 362
Query: 548 KKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQK 585
K+E VA + IT++ L K+ + Q E +K
Sbjct: 363 KEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEK 400
>gi|54633319 PDZ domain-containing guanine nucleotide exchange factor
I [Homo sapiens]
Length = 1601
Score = 42.7 bits (99), Expect = 0.001
Identities = 75/342 (21%), Positives = 132/342 (38%), Gaps = 49/342 (14%)
Query: 174 STEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQ-- 231
S+ H SP + S ++ +A+S N++DS + S+ + ++ A+LQ
Sbjct: 1232 SSLHSSPPASPQGSPHKGYTLIPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAALQDE 1291
Query: 232 --IGEKMPVTASVLSEEEQTHCLEIGSNTRHGKS----NLSEGKKSAELNSPLRERLSPE 285
+ + V S + E+ H IG +++HG S K A +S E +S E
Sbjct: 1292 RCSSQALAVPESTGALEKTEHASGIGDHSQHGPGWTLLKPSLIKCLAVSSSVSNEEISQE 1351
Query: 286 NRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEG 345
+ + DS GS + H + P P S W
Sbjct: 1352 HIIIEA-ADSGRGSWTSCSSSSHDNFQSL-------PNPKS--------WDFLNSYRHTH 1395
Query: 346 VSDHLAHREPKSQKPFRKMQE-----------EEEESWSTSSDLTISISEDDLILESPEP 394
+ D +A EP +P+ + E +SW++SS L+ + + ++
Sbjct: 1396 LDDPIAEVEPTDSEPYSCSKSCSRTCGQCKGSLERKSWTSSSSLSDTYEPNYGTVKRRVL 1455
Query: 395 QPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQ 454
+ P EG D +A ++ + V STEK I+ ++SP + REP
Sbjct: 1456 ESTPAESSEGLDPKDATDPVY---KTVTSSTEKGLIVYCVTSPKKDDR------YREPPP 1506
Query: 455 TPDS----DVPRAQVGQHVATLKEHDNSVKEEATALLRKALT 492
TP + + G H LK D SV + + ++ +L+
Sbjct: 1507 TPPGYLGISLADLKEGPH-THLKPPDYSVAVQRSKMMHNSLS 1547
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 42.0 bits (97), Expect = 0.002
Identities = 118/586 (20%), Positives = 215/586 (36%), Gaps = 57/586 (9%)
Query: 31 EKKRLDLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESEKKAHTRNQEYLKRFERVQAH 90
+KK L EKK + + K + Y KE KK + + L F ++ A
Sbjct: 1835 QKKNLAQEKKNLAQEKEKLAQRKENLL----YNKERLTHSKKQLVQVKNKLGMFNKILAQ 1890
Query: 91 VVH-FTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEELTDEDREKVAVHEGINSGTAMS 149
V T E + K K + KK++ +DSL K+E +++ K+A+ + + G
Sbjct: 1891 VEEKLTQEKETVIKKKEKLAETEKKLVQVEDSLAKKQEKLAQEKMKLALEKAMVQGKKRL 1950
Query: 150 RGLYQPATIFMGRQMSAILSMRDFSTEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVV 209
RG A + + L M+ + E K + S +T ++S
Sbjct: 1951 RGELDIAK----EEKALNLEMKRLAEEKMRLVEGK-----ETLSKGETPETSRQRK---- 1997
Query: 210 QTSNDTQCLNKSDNIDGKASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGK 269
T + + + +++ K L + + S +++ + LE TR + + +
Sbjct: 1998 MTQVEQELFERKLSLEEKILLHEDRILAMEESEIAKGK----LEF---TRGQRIFVQGQR 2050
Query: 270 KSAELNSPL---RERLS--PENRTTDLKCDSSSGSEGEILTREHIE---------VEEKR 315
K A+ + L RE LS P LK + LT+E I+ V+E+R
Sbjct: 2051 KLAKASRKLIKKRESLSKEPAKLNKILKALQKLTRDERKLTQEEIKMTKMKRALFVKERR 2110
Query: 316 ASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTS 375
S S + + E+ S EK S LA ++ K R+M +EE+
Sbjct: 2111 LSIEQSKLDIKEWDFS------EKRSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEE 2164
Query: 376 SDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLS 435
S L SE +IL+ E G +E E+ I LK +++ + + S
Sbjct: 2165 SKLARKHSE--VILDDEEE-----GGIEEEEVIPFLKRRWRKRKEAKRGDKPK---EKFS 2214
Query: 436 SPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEATALLRKALTEEC 495
S E ES + + + + + +E + +EE + EE
Sbjct: 2215 SQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEE 2274
Query: 496 GRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVAAD 555
G + E ++E + E+E S ++ ++E+ + +
Sbjct: 2275 GEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLE 2334
Query: 556 IPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGLNIGSG 601
+ + ++LKK Q + + +S L G+ G G
Sbjct: 2335 EEVDREK--EILKKEKQFKLQEQRRKSLRGRERVLSILRGVPHGKG 2378
>gi|58331189 T-cell lymphoma invasion and metastasis 2 isoform b
[Homo sapiens]
Length = 626
Score = 41.6 bits (96), Expect = 0.002
Identities = 94/430 (21%), Positives = 173/430 (40%), Gaps = 53/430 (12%)
Query: 54 LKYVKLKNYLKEICESEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIK 113
LKY L L + + E + H E LK E+V +H+ ++QK+ +Y T
Sbjct: 178 LKYPLLLKELVSLTDQESEEHYHLTEALKAMEKVASHI-------NEMQKIYEDYGTVFD 230
Query: 114 KMLCSKDSLGLKEELTDEDREKVAVHEGIN-SGTAMSRGLYQ---PATIFMGRQMSAILS 169
+++ + G ++E+T+ ++ +H ++ +S G + T+F+ ++ ++
Sbjct: 231 QLVAEQS--GTEKEVTELSMGELLMHSTVSWLNPFLSLGKARKDLELTVFVFKRAVILVY 288
Query: 170 MRDFSTEHKSP---QPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKS--DNI 224
+ + K P +P N + DP R S + V+ N N S + I
Sbjct: 289 KENCKLKKKLPSNSRPAHNSTDLDPFKFRWLIPIS----ALQVRLGNPAGTENNSIWELI 344
Query: 225 DGKASLQIGEKMPVTASVLSEEEQTHCLEI------GSNTRHGKSNLSEGKKSAELNSPL 278
K+ ++ + E +T+ +++ + RH K L K + PL
Sbjct: 345 HTKSEIEGRPETIFQLCCSDSESKTNIVKVIRSILRENFRRHIKCELPLEKTCKDRLVPL 404
Query: 279 RER------LSPENRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPV--SPIPVSEYCE 330
+ R L+ LK SS+ GE ++ +E S S P +E +
Sbjct: 405 KNRVPVSAKLASSRSLKVLKNSSSNEWTGETGKGTLLDSDEGSLSSGTQSSGCPTAEGRQ 464
Query: 331 SENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEE--ESWSTSSDLTIS-----IS 383
S K+ P G++D + +S + + + + S + D+ I IS
Sbjct: 465 DSKSTSPGKY-PHPGLADFADNLIKESDILSDEDDDHRQTVKQGSPTKDIEIQFQRLRIS 523
Query: 384 EDDLILESPEPQPNPGGKMEGEDGIEALKLIHAE---QERVALST--EKNCILQTL---S 435
ED + E QP P EG+ G E KL+ +R A ST ++ +L+
Sbjct: 524 EDPDVHPEAEQQPGPESG-EGQKGGEQPKLVRGHFCPIKRKANSTKRDRGTLLKAQIRHQ 582
Query: 436 SPDSEKESST 445
S DS+ E++T
Sbjct: 583 SLDSQSENAT 592
>gi|58331187 T-cell lymphoma invasion and metastasis 2 isoform a [Homo
sapiens]
Length = 1701
Score = 41.6 bits (96), Expect = 0.002
Identities = 94/430 (21%), Positives = 173/430 (40%), Gaps = 53/430 (12%)
Query: 54 LKYVKLKNYLKEICESEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIK 113
LKY L L + + E + H E LK E+V +H+ ++QK+ +Y T
Sbjct: 1253 LKYPLLLKELVSLTDQESEEHYHLTEALKAMEKVASHI-------NEMQKIYEDYGTVFD 1305
Query: 114 KMLCSKDSLGLKEELTDEDREKVAVHEGIN-SGTAMSRGLYQ---PATIFMGRQMSAILS 169
+++ + G ++E+T+ ++ +H ++ +S G + T+F+ ++ ++
Sbjct: 1306 QLVAEQS--GTEKEVTELSMGELLMHSTVSWLNPFLSLGKARKDLELTVFVFKRAVILVY 1363
Query: 170 MRDFSTEHKSP---QPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKS--DNI 224
+ + K P +P N + DP R S + V+ N N S + I
Sbjct: 1364 KENCKLKKKLPSNSRPAHNSTDLDPFKFRWLIPIS----ALQVRLGNPAGTENNSIWELI 1419
Query: 225 DGKASLQIGEKMPVTASVLSEEEQTHCLEI------GSNTRHGKSNLSEGKKSAELNSPL 278
K+ ++ + E +T+ +++ + RH K L K + PL
Sbjct: 1420 HTKSEIEGRPETIFQLCCSDSESKTNIVKVIRSILRENFRRHIKCELPLEKTCKDRLVPL 1479
Query: 279 RER------LSPENRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPV--SPIPVSEYCE 330
+ R L+ LK SS+ GE ++ +E S S P +E +
Sbjct: 1480 KNRVPVSAKLASSRSLKVLKNSSSNEWTGETGKGTLLDSDEGSLSSGTQSSGCPTAEGRQ 1539
Query: 331 SENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEE--ESWSTSSDLTIS-----IS 383
S K+ P G++D + +S + + + + S + D+ I IS
Sbjct: 1540 DSKSTSPGKY-PHPGLADFADNLIKESDILSDEDDDHRQTVKQGSPTKDIEIQFQRLRIS 1598
Query: 384 EDDLILESPEPQPNPGGKMEGEDGIEALKLIHAE---QERVALST--EKNCILQTL---S 435
ED + E QP P EG+ G E KL+ +R A ST ++ +L+
Sbjct: 1599 EDPDVHPEAEQQPGPESG-EGQKGGEQPKLVRGHFCPIKRKANSTKRDRGTLLKAQIRHQ 1657
Query: 436 SPDSEKESST 445
S DS+ E++T
Sbjct: 1658 SLDSQSENAT 1667
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 41.2 bits (95), Expect = 0.003
Identities = 56/225 (24%), Positives = 84/225 (37%), Gaps = 34/225 (15%)
Query: 344 EGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKME 403
E S PKS+K +K QE + + + D+ + SE D S + + G E
Sbjct: 155 ERASARSKRSSPKSRKGKKKSQENKNKG-NKIQDIQLKTSEPDFT--SANMRDSAEGPKE 211
Query: 404 GEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRA 463
E+ A L E+ LQ ++S + E +T AP EP PD + A
Sbjct: 212 DEEKPSASAL------------EQPATLQEVASQEVPPELATPAPAWEPQPEPDERLEAA 259
Query: 464 -----QVGQHVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNS 518
+G+ +E D +E+ E+ G A +E+S P I D
Sbjct: 260 ACEVNDLGEEEEEEEEEDEEEEEDDD----DDELEDEGEEEASMPNENSVKEPEIRCDE- 314
Query: 519 GIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVAADIPITETEA 563
KP L T +E C + + A IP T+ EA
Sbjct: 315 -----KPEDLLEEPKTTSEETLEDCSEVTP----AMQIPRTKEEA 350
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 41.2 bits (95), Expect = 0.003
Identities = 56/225 (24%), Positives = 84/225 (37%), Gaps = 34/225 (15%)
Query: 344 EGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKME 403
E S PKS+K +K QE + + + D+ + SE D S + + G E
Sbjct: 155 ERASARSKRSSPKSRKGKKKSQENKNKG-NKIQDIQLKTSEPDFT--SANMRDSAEGPKE 211
Query: 404 GEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRA 463
E+ A L E+ LQ ++S + E +T AP EP PD + A
Sbjct: 212 DEEKPSASAL------------EQPATLQEVASQEVPPELATPAPAWEPQPEPDERLEAA 259
Query: 464 -----QVGQHVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILNDNS 518
+G+ +E D +E+ E+ G A +E+S P I D
Sbjct: 260 ACEVNDLGEEEEEEEEEDEEEEEDDD----DDELEDEGEEEASMPNENSVKEPEIRCDE- 314
Query: 519 GIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVAADIPITETEA 563
KP L T +E C + + A IP T+ EA
Sbjct: 315 -----KPEDLLEEPKTTSEETLEDCSEVTP----AMQIPRTKEEA 350
>gi|148806891 hypothetical protein LOC54906 [Homo sapiens]
Length = 2430
Score = 40.0 bits (92), Expect = 0.007
Identities = 51/196 (26%), Positives = 75/196 (38%), Gaps = 21/196 (10%)
Query: 282 LSPENRTT---DLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSE----YCESE-- 332
+ PEN T DL +S + + L + + S S PVSE +C SE
Sbjct: 509 VQPENTTAAHNDLPENSIVNYDSQALNM----LADLALSSATSSTPVSEARNLHCSSELP 564
Query: 333 -NKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILES 391
N K + G SDH HR K+QK + ++ SDLT+S E+ L+ S
Sbjct: 565 QNDVLLSKENSLRGTSDHEYHRGVKTQKGELLPNPSSDRKSNSGSDLTVSQDEESLVPCS 624
Query: 392 PEPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAP--T 449
P E E L+ A Q +L T S +E +P
Sbjct: 625 QAPAKAQSALTE-----EMLESSDASQSSSVSVEHSYALLLTEHSKKHLQEREILSPLFP 679
Query: 450 REPGQTPDSDVPRAQV 465
R ++P++ P +V
Sbjct: 680 RNGTKSPEAATPVGKV 695
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 39.7 bits (91), Expect = 0.009
Identities = 64/353 (18%), Positives = 136/353 (38%), Gaps = 31/353 (8%)
Query: 55 KYVKLKNYLKEICESEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKK 114
K + ++ K I ES++K R+Q K E+++ EK +K+K E++++
Sbjct: 781 KEIDIEKQEKHIKESKEKPEKRSQIKEKDIEKMERKTF------EKEKKIKHEHKSE--- 831
Query: 115 MLCSKDSLGLKEELTDEDREKVAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFS 174
KD L L E D+ +EK ++ ++ G T + + S
Sbjct: 832 ----KDKLDLSE-CVDKIKEKDKLYSH-HTEKCHKEGEKSKNTAAIKKTDDREKSREKMD 885
Query: 175 TEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGE 234
+H +P K + + + + +D+ S + K +D K + E
Sbjct: 886 RKHDKEKPEKERHLAESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKE 945
Query: 235 KMPVTASVLSEEEQTHCLEIGSNTRHGKS-NLSEGKKSAELNSPLRERLSPENRTTDLKC 293
+ +T S +EE+ + G+ +H K +L E K L +P + +++ D +
Sbjct: 946 SINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEKTKDEPLKTPDGKEKDKKDKDID-RY 1004
Query: 294 DSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENK---------WSQEKHSPWE 344
+ +I ++++ + P P S+ + K S E+ +
Sbjct: 1005 KERDKHKDKIQINSLLKLKSEADKPKPKSSPASKDTRPKEKRLVNDDLMQTSFERMLSLK 1064
Query: 345 GVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPN 397
+ H++ K K++++E+E + L + I + + +P N
Sbjct: 1065 DLEIEQWHKKHK-----EKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKN 1112
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 39.7 bits (91), Expect = 0.009
Identities = 64/353 (18%), Positives = 136/353 (38%), Gaps = 31/353 (8%)
Query: 55 KYVKLKNYLKEICESEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKK 114
K + ++ K I ES++K R+Q K E+++ EK +K+K E++++
Sbjct: 804 KEIDIEKQEKHIKESKEKPEKRSQIKEKDIEKMERKTF------EKEKKIKHEHKSE--- 854
Query: 115 MLCSKDSLGLKEELTDEDREKVAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFS 174
KD L L E D+ +EK ++ ++ G T + + S
Sbjct: 855 ----KDKLDLSE-CVDKIKEKDKLYSH-HTEKCHKEGEKSKNTAAIKKTDDREKSREKMD 908
Query: 175 TEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGE 234
+H +P K + + + + +D+ S + K +D K + E
Sbjct: 909 RKHDKEKPEKERHLAESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKE 968
Query: 235 KMPVTASVLSEEEQTHCLEIGSNTRHGKS-NLSEGKKSAELNSPLRERLSPENRTTDLKC 293
+ +T S +EE+ + G+ +H K +L E K L +P + +++ D +
Sbjct: 969 SINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEKTKDEPLKTPDGKEKDKKDKDID-RY 1027
Query: 294 DSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENK---------WSQEKHSPWE 344
+ +I ++++ + P P S+ + K S E+ +
Sbjct: 1028 KERDKHKDKIQINSLLKLKSEADKPKPKSSPASKDTRPKEKRLVNDDLMQTSFERMLSLK 1087
Query: 345 GVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPN 397
+ H++ K K++++E+E + L + I + + +P N
Sbjct: 1088 DLEIEQWHKKHK-----EKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKN 1135
>gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens]
Length = 880
Score = 39.3 bits (90), Expect = 0.012
Identities = 55/270 (20%), Positives = 102/270 (37%), Gaps = 38/270 (14%)
Query: 435 SSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEATALLRK----- 489
SS S + ST++PT P TP P ++ Q V H + + ++++ K
Sbjct: 414 SSTMSAQAHSTSSPTESPHSTPLLSSPDSEQRQSVEASGHHTHHQSDSPSSVVNKQLGSM 473
Query: 490 ALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLN------SVPTREQEVSSGC 543
+L E+ + S + P + S + LN S+ + + + S C
Sbjct: 474 SLDEQQDNNNEKLSPKPGTGEPVLSLHYSTEGTTTSTIKLNFTDEWSSIASSSRGIGSHC 533
Query: 544 GDKSKKENVAADIPITETEAYQLLK--KATLQDNT---------NQTENRFQKT------ 586
+ ++E+ + E K + + +D T N EN T
Sbjct: 534 KSEGQEESFVPQSSVQPPEGDSETKAPEESSEDVTKYQEGVSAENPVENHINITQSDKFT 593
Query: 587 ----DASVSHLSGLNI--GSGAFETKTANKIASEASFSSSEGSPLSRHENKKKPVINLKS 640
D++ + LN+ G E +++ A E S + + +EN P ++
Sbjct: 594 AKPLDSNSGERNDLNLDRSCGVPEESASSEKAKEPETSDQTSTESATNENNTNPEPQFQT 653
Query: 641 NALWDESDDSNSEIEAALRPRNHNTDDSDD 670
A + + S ++AL+ +TDDSDD
Sbjct: 654 EATGPSAHEETSTRDSALQ----DTDDSDD 679
>gi|54633315 deoxynucleotidyltransferase, terminal, interacting
protein 2 [Homo sapiens]
Length = 756
Score = 38.9 bits (89), Expect = 0.016
Identities = 69/314 (21%), Positives = 113/314 (35%), Gaps = 63/314 (20%)
Query: 98 TEKLQKLKLEYETQIKKMLCSKDSLGLKEELTDEDREKVAVHEGINSGTAMSRGLYQPAT 157
+ +L+ L +T +++++ + S T +++ V+VH +NS M AT
Sbjct: 317 SSQLKNLSELQDTSLQQLVSQRHS-------TPQNKNAVSVHSNLNSEAVMKSLTQTFAT 369
Query: 158 IFMGRQMSAILSMRDFSTEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQC 217
+ +GR ++ KSP D S + +S V+ S D
Sbjct: 370 VEVGR----------WNNNKKSP-----IKASDLTKFGDCGGSDDEEESTVISVSED--- 411
Query: 218 LNKSDNIDGKASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAEL--- 274
+N N+D + ++ P T S+ + L + S+ +S SE ++
Sbjct: 412 MNSEGNVDFECDTKLYTSAPNT----SQGKDNSVLLVLSSDESQQSENSENEEDTLCFVE 467
Query: 275 NSPLRERLSPENRTTDLKCDSS----SGSEGEILTREHIEVEEKRASPPVSPIPVSEYCE 330
NS RE LS + T L CD++ + G + EE +A SE
Sbjct: 468 NSGQRESLSGD--TGSLSCDNALFVIDTTPGMSADKNFYLEEEDKA---------SEVAI 516
Query: 331 SENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILE 390
E K +E E SDH +E E+ +S D S L L
Sbjct: 517 EEEKEEEEDEKSEEDSSDH----------------DENEDEFSDEEDFLNSTKAKLLKLT 560
Query: 391 SPEPQPNPGGKMEG 404
S P K G
Sbjct: 561 SSSIDPGLSIKQLG 574
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 38.9 bits (89), Expect = 0.016
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 24 QHGLRDSEKKRLDLEK-KLYEYNQSDTCRVKLKYVKLKNYLKEICESEKKAHTRNQEYLK 82
Q +R+ E+KR + EK + E Q ++ + K++ ++I E E+ + ++ +
Sbjct: 356 QEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGE 415
Query: 83 RFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEELTDEDREKVAVHEG 141
+ E++ EK+++ + + Q KK+ ++ + +EE+ E EK+ EG
Sbjct: 416 QEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMGEQEG 474
Score = 37.7 bits (86), Expect = 0.035
Identities = 25/123 (20%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 18 ERLGQLQHGLRDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESEKKAHTRN 77
E++ + + +R+ EKK + E+K+ E + ++ + K+ ++CE E K +
Sbjct: 432 EKMRRQEEKIREQEKKIREQEEKIREQEEM----MQEQEEKMGEQEGKMCEQEAKMQEQE 487
Query: 78 QEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEELTDEDREKVA 137
++ ++ E+++ EK+++ + + Q +KM ++ + +EE E EK+
Sbjct: 488 EKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMR 547
Query: 138 VHE 140
E
Sbjct: 548 RQE 550
Score = 32.0 bits (71), Expect = 1.9
Identities = 24/129 (18%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 18 ERLGQLQHGLRDSEKKRLDLEKKLYEYN---QSDTCRVKLKYVKLKNYLKEICESEKKAH 74
E++ + + +++ E+K + E+K++E Q +++ + K++ K+I E E+K
Sbjct: 397 EKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIR 456
Query: 75 TRNQEYLKRFERVQ-------AHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEE 127
+ + ++ E++ EK+++ + + Q KK+ ++ + +EE
Sbjct: 457 EQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEE 516
Query: 128 LTDEDREKV 136
+ E EK+
Sbjct: 517 MMQEQEEKM 525
Score = 31.6 bits (70), Expect = 2.5
Identities = 23/122 (18%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 18 ERLGQLQHGLRDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESEKKAHTRN 77
E++ + + +++ E+K + E K+ E +++ + K++ ++I E EKK +
Sbjct: 453 EKIREQEEMMQEQEEKMGEQEGKMCEQE----AKMQEQEEKMRRQEEKIREQEKKIREQE 508
Query: 78 QEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEELTDEDREKVA 137
++ ++ E +Q EK+ + + + + Q +KM ++ + +E + EK+
Sbjct: 509 EKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMREQEVRLRQQEEKMQ 568
Query: 138 VH 139
H
Sbjct: 569 EH 570
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 38.9 bits (89), Expect = 0.016
Identities = 92/458 (20%), Positives = 187/458 (40%), Gaps = 71/458 (15%)
Query: 15 DYYERLGQLQHGLRDSEKKRLDLEKKLYEYN------QSDTCRVKLKYVKLKNYLKEICE 68
D E QL+ L++ ++K L LE+K E ++D+ VK + L++ +
Sbjct: 699 DKQEHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKLEADSLEVKASKEQALQDLQQQRQ 758
Query: 69 SEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEEL 128
R E K+ E ++ +V T +L L+ +++ + +K++L
Sbjct: 759 LNTDLELRATELSKQLE-MEKEIVSST-------RLDLQKKSEALE--------SIKQKL 802
Query: 129 TDEDREKVAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFSTEHKSPQPTKNFSI 188
T ++ EK + + + + ++ ++ R + + ++ E K T+ ++
Sbjct: 803 TKQEEEKQILKQDFETLSQETKIQHEELN---NRIQTTVTELQKVKME-KEALMTELSTV 858
Query: 189 PDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGEKMPVTASVLSEEEQ 248
D + S V+DS +++ + +N GKA++ EK T L + Q
Sbjct: 859 KD--------KLSKVSDSL-----KNSKSEFEKENQKGKAAILDLEK---TCKELKHQLQ 902
Query: 249 THCLEIGSNTRHGKSNLSEGKKSA-----ELNSPLRERLSPEN--RTTDLKCDSSSGSEG 301
+ K +L + K+++ ELNS + + +N + + + G+
Sbjct: 903 VQMENTLKEQKELKKSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNIN 962
Query: 302 EILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDH------LAHREP 355
E+ + ++ A I V + E ENK Q+ + ++ L +
Sbjct: 963 ELKQSSEQKKKQIEALQGELKIAVLQKTELENKLQQQLTQAAQELAAEKEKISVLQNNYE 1022
Query: 356 KSQKPFRKMQEE----EEESWSTSSDL-----TISISEDDLILESPEPQPNPGGKMEGED 406
KSQ+ F+++Q + E E +T DL +S++++DLI S Q K+
Sbjct: 1023 KSQETFKQLQSDFYGRESELLATRQDLKSVEEKLSLAQEDLI--SNRNQIGNQNKL---- 1076
Query: 407 GIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESS 444
I+ LK A E+ + E+ + + D +KE S
Sbjct: 1077 -IQELKTAKATLEQDSAKKEQQLQERCKALQDIQKEKS 1113
>gi|224586823 coiled-coil domain containing 110 isoform b [Homo
sapiens]
Length = 796
Score = 38.9 bits (89), Expect = 0.016
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 15/121 (12%)
Query: 20 LGQLQHGLRDSEKKRL---------DLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESE 70
L Q +H ++D E++ + EK + ++ C K++Y L+NYLKE + +
Sbjct: 348 LDQTKHEMKDKERQPFLVKQGSIISENEKTSKVNSVTEQCVAKIQY--LQNYLKESVQIQ 405
Query: 71 KKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEELTD 130
KK E L +++ + FTT + +QK++ YE Q+K ++ K ++ K T+
Sbjct: 406 KKVMELESENLNLKSKMKPLI--FTTQS-LIQKVE-TYEKQLKNLVEEKSTIQSKLSKTE 461
Query: 131 E 131
E
Sbjct: 462 E 462
>gi|22749515 coiled-coil domain containing 110 isoform a [Homo
sapiens]
Length = 833
Score = 38.9 bits (89), Expect = 0.016
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 15/121 (12%)
Query: 20 LGQLQHGLRDSEKKRL---------DLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESE 70
L Q +H ++D E++ + EK + ++ C K++Y L+NYLKE + +
Sbjct: 385 LDQTKHEMKDKERQPFLVKQGSIISENEKTSKVNSVTEQCVAKIQY--LQNYLKESVQIQ 442
Query: 71 KKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEELTD 130
KK E L +++ + FTT + +QK++ YE Q+K ++ K ++ K T+
Sbjct: 443 KKVMELESENLNLKSKMKPLI--FTTQS-LIQKVE-TYEKQLKNLVEEKSTIQSKLSKTE 498
Query: 131 E 131
E
Sbjct: 499 E 499
>gi|34996489 pleckstrin homology domain interacting protein [Homo
sapiens]
Length = 1821
Score = 38.5 bits (88), Expect = 0.020
Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 176 EHKSPQPTKNFSIPDPHSH---------RQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDG 226
E+K P +KN + H H +QT Q + T S + +T ++ + +G
Sbjct: 765 ENKIPTVSKNHA----HEHFLDLGESKKQQTNQHNYRTRSALEETPRPSEEIE-----NG 815
Query: 227 KASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPEN 286
+S GE + V+ SEEE+ GS++ + S+ S+ A +N +++ P+N
Sbjct: 816 SSSSDEGEVVAVSGGT-SEEEERAWHSDGSSSDYS-SDYSDWTADAGINLQPPKKV-PKN 872
Query: 287 RTTDLKCDSSSGSEGEILTREHIEVEEKRASP----PVSP------------IPVSEYCE 330
+T + S E E ++ I+ E+K+ + P+SP + V E
Sbjct: 873 KTKKAESSSDEEEESEKQKQKQIKKEKKKVNEEKDGPISPKKKKPKERKQKRLAVGEL-- 930
Query: 331 SENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILE 390
+EN + E+ P ++D + R PF +E + + + ++ + I
Sbjct: 931 TENGLTLEEWLPSTWITDTIPRR-----CPFVPQMGDEVYYFRQGHEAYVEMARKNKIY- 984
Query: 391 SPEPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEK 441
S P+ P KME + E +K++ + E V L T C+ PD+ K
Sbjct: 985 SINPKKQPWHKMELREQ-ELMKIVGIKYE-VGLPT-LCCLKLAFLDPDTGK 1032
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 38.5 bits (88), Expect = 0.020
Identities = 103/519 (19%), Positives = 192/519 (36%), Gaps = 59/519 (11%)
Query: 170 MRDFSTEHKSPQPTKNF-SIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCLNKSDNIDGK- 227
M D + ++ P++ F +I S + + S D V N +K+D DGK
Sbjct: 1143 MSDETNNEETESPSQEFVNITKYESSLYSQEYSKPAD---VTPLNGFSEGSKTDATDGKD 1199
Query: 228 -----ASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERL 282
+++ M S +C E+ ++T + S +++ L
Sbjct: 1200 YNASASTISPPSSMEEDKFSRSALRDAYCSEVKASTTLDIKDSISAVSSEKVSPSKSPSL 1259
Query: 283 SPENRTTDLKCDSSSGSEGEILTREHIEV----EEKRASPPVSPIPVSEYCESENKWSQE 338
SP + K S LT I+V E SP V+ V E+C S + E
Sbjct: 1260 SPSPPSPLEKTPLGERSVNFSLTPNEIKVSAEAEVAPVSPEVTQEVVEEHCASPEDKTLE 1319
Query: 339 KHSPWEGVSDHLAH----REPKSQKPFRKMQE--EEEESWSTSSDLTISISEDDLILESP 392
SP + V+ H + P +K E E+ + S + + + E++ SP
Sbjct: 1320 VVSPSQSVTGSAGHTPYYQSPTDEKSSHLPTEVIEKPPAVPVSFEFSDAKDENERASVSP 1379
Query: 393 EPQPNPGGKMEGEDGIEALK---LIHAEQERVA-LSTEKNCILQTLSSPDSEKESSTNAP 448
+P P + E + L+ LI +E + LS + + SP EK +P
Sbjct: 1380 MDEPVPDSESPIEKVLSPLRSPPLIGSESAYESFLSADDKASGRGAESPFEEKSGKQGSP 1439
Query: 449 TREPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSC 508
+ +P S++ + Q K+E + + E+ G+ E+
Sbjct: 1440 DQ---VSPVSEMTSTSLYQD-----------KQEGKSTDFAPIKEDFGQEKKTDDVEAMS 1485
Query: 509 SLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVAADIPITETEAYQLLK 568
S P++ D + + P D S+ + D ++ +E K
Sbjct: 1486 SQPALALDERKLGDVSPTQI----------------DVSQFGSFKEDTKMSISEGTVSDK 1529
Query: 569 KATLQDNTNQTENRFQKTDASVSHLSGLNIGSGAFETKTANKIASEASFSSSEGSPLSRH 628
AT D E+ + + V+ +S ++ + +F T + ++ S + GSP S
Sbjct: 1530 SATPVDE-GVAEDTYSHME-GVASVSTASVATSSFPEPTTDDVS--PSLHAEVGSPHSTE 1585
Query: 629 ENKKKPVINLKSNALWDESDDSNSEIEAALRPRNHNTDD 667
+ V +++ + E++ S S+ E RP + + D
Sbjct: 1586 VDDSLSVSVVQTPTTFQETEMSPSK-EECPRPMSISPPD 1623
>gi|124249396 coiled-coil domain containing 30 [Homo sapiens]
Length = 783
Score = 37.7 bits (86), Expect = 0.035
Identities = 35/147 (23%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 12 SSPDYYERLGQLQHGLRDSEKKRLDLEKKLYEYNQ---SDTCRVKLKYVKLKNYLKEICE 68
S + E+L Q + + D+E+K LDL++KL ++ +DTC + + +L+ +KE +
Sbjct: 334 SQNNLQEKLVQEKSKVADAEEKILDLQRKLEHAHKVCLTDTCISEKQ--QLEEKIKEATQ 391
Query: 69 SEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEE- 127
+E K + QE E+ + +++ + Q L+ + + +M CS+ ++++
Sbjct: 392 NEAKVKQQYQE-----EQQKRKLLYQNVDELHRQVRTLQDKENLLEMTCSQQQSRIQQQE 446
Query: 128 --LTDEDREKVAVHEGINSGTAMSRGL 152
L + EK E + S +S L
Sbjct: 447 ALLKQLENEKRKYDEHVKSNQELSEKL 473
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 37.7 bits (86), Expect = 0.035
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 28 RDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESEKKAHTRNQEYLKRFERV 87
+ E+ L+ EKK E + + +++ + +L LK+I E KKA +E +R +
Sbjct: 316 KQMERAMLENEKKKREMAEKEKEKIEREKEELMERLKQIEEQTKKAQQELEEQTRRALEL 375
Query: 88 QAHVVHFTTNTEKLQKLKLEYETQIKKML-CSKDSLGLKEELTDEDREKVA 137
+ + EKL K + E E + +L S+D +E+L E E A
Sbjct: 376 EQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTA 426
>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
Length = 556
Score = 37.7 bits (86), Expect = 0.035
Identities = 87/416 (20%), Positives = 152/416 (36%), Gaps = 63/416 (15%)
Query: 226 GKASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRERLSPE 285
G++ L+ EK + V EEE + +R K +L+ KK +P + PE
Sbjct: 38 GRSHLEPEEKQALKRLV--EEELLKMQVDEAASREDKLDLT--KKGKRPPTPCSD---PE 90
Query: 286 NRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEG 345
+ +S SGSE PP +E ++ + + E
Sbjct: 91 RKRFRFNSESESGSEAS---------SPDYFGPPAKNGVAAEVSPAKEENPRRASKAVEE 141
Query: 346 VSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTI---------SISEDDLILESPEPQP 396
SD R+ +Q+ +EEE+ + + S+S ES E +
Sbjct: 142 SSDEERQRDLPAQRGEESSEEEEKGYKGKTRKKPVVKKQAPGKASVSRKQAREESEESEA 201
Query: 397 NP----GGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREP 452
P K+EG G ++LK E E L+ +K ++E +E
Sbjct: 202 EPVQRTAKKVEGNKGTKSLKESEQESEEEILAQKK-----------EQREEEVEEEEKEE 250
Query: 453 GQTPDSDVPRAQV-GQHVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSCSL- 510
+ PR + G+ + +E K +A LL + +EE + +A +S
Sbjct: 251 DEEKGDWKPRTRSNGRRKSAREERSCKQKSQAKRLLGDSDSEEEQKEAASSGDDSGRDRE 310
Query: 511 PSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVAADIPITETEAYQLLKKA 570
P + + + K L+ + E E SG G+ + K + +K
Sbjct: 311 PPVQRKSEDRTQLKGGKRLSG--SSEDEEDSGKGEPTAKGS----------------RKM 352
Query: 571 TLQDNTNQTENRFQKTDASVSHLSGLNIG--SGAFETKTANKIASEASFSSSEGSP 624
+T+ E+ ++ + S S G G K++ K + +S SSS+GSP
Sbjct: 353 ARLGSTSGEESDLER-EVSDSEAGGGPQGERKNRSSKKSSRKGRTRSSSSSSDGSP 407
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 37.4 bits (85), Expect = 0.045
Identities = 24/123 (19%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 18 ERLGQLQHGLRDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESEKKAHTRN 77
E++ + + +R+ E+K + E+K+ E + + + K+ +++CE E+K +
Sbjct: 578 EKVWRQEEKIREQEEKIREQEEKIREQEEM----TQEQEEKMGEQEEKMCEQEEKMQEQE 633
Query: 78 QEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEELTDEDREKVA 137
++ ++ E+++ EK+++ + + Q +KM ++ + +EE E EK+
Sbjct: 634 EKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMR 693
Query: 138 VHE 140
E
Sbjct: 694 RQE 696
Score = 33.1 bits (74), Expect = 0.86
Identities = 23/123 (18%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 18 ERLGQLQHGLRDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESEKKAHTRN 77
E++ + + ++ E+K + E+K+ E + +++ + K++ ++I E EKK +
Sbjct: 599 EKIREQEEMTQEQEEKMGEQEEKMCEQEE----KMQEQEEKMRRQEEKIREQEKKIREQE 654
Query: 78 QEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEELTDEDREKVA 137
++ ++ E +Q EK+ + + + + Q +KM ++ + +E + EK+
Sbjct: 655 EKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQEVRLRQQEEKMQ 714
Query: 138 VHE 140
H+
Sbjct: 715 EHQ 717
Score = 32.7 bits (73), Expect = 1.1
Identities = 20/95 (21%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 18 ERLGQLQHGLRDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESEKKAHTRN 77
E++ + + +R+ EKK + E+K+ E + ++ + K+ +++CE E+K +
Sbjct: 634 EKMRRQEEKIREQEKKIREQEEKIREQEEM----MQEQEEKMWEQEEKMCEQEEKMQEQE 689
Query: 78 QEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQI 112
++ ++ E++ V EK+Q+ + E I
Sbjct: 690 EKMRRQEEKMWEQEVRLRQQEEKMQEHQEHLEAAI 724
Score = 32.0 bits (71), Expect = 1.9
Identities = 26/136 (19%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 18 ERLGQLQHGLRDSEKKRLDLEKKLYEYN----------QSDTCRVKLKYVKLKNYLKE-- 65
E++ + + +R+ E+K E+K++E Q + R + K + + ++
Sbjct: 484 EKIREQEEKIREQEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKE 543
Query: 66 -ICESEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGL 124
I E E+K + ++ ++ E++ EK+ + + + Q +K+ ++ +
Sbjct: 544 KIHEQEEKIRKQEEKMWRQEEKMHDQEEKIREQEEKVWRQEEKIREQEEKIREQEEKIRE 603
Query: 125 KEELTDEDREKVAVHE 140
+EE+T E EK+ E
Sbjct: 604 QEEMTQEQEEKMGEQE 619
Score = 31.6 bits (70), Expect = 2.5
Identities = 24/117 (20%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 18 ERLGQLQHGLRDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESEKKAHTRN 77
E + + + + E+K + E+K+ E + +++ + K++ K+I E E+K +
Sbjct: 606 EMTQEQEEKMGEQEEKMCEQEEKMQEQEE----KMRRQEEKIREQEKKIREQEEKIREQE 661
Query: 78 QEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEELTDEDRE 134
+ ++ E++ EK+Q+ + + Q +KM + L +EE E +E
Sbjct: 662 EMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQEVRLRQQEEKMQEHQE 718
>gi|190194423 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 37.4 bits (85), Expect = 0.045
Identities = 62/319 (19%), Positives = 121/319 (37%), Gaps = 39/319 (12%)
Query: 365 QEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKLIHAEQERVALS 424
+E E+E+ ++ D + +E +L+S E + +G+ + L L E LS
Sbjct: 50 EENEKETAVSTEDDSHHKAEKSSVLKSKEESHEQSAE-QGKSSSQELGLKDQEDSDGHLS 108
Query: 425 -------TEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDN 477
TE ++ S EK+ S N PG + +D + + + +E+
Sbjct: 109 VNLEYAPTEGTLDIKEDMSEPQEKKLSENTDFLAPGVSSFTD---SNQQESITKREENQE 165
Query: 478 SVKEEATALLRKALTEECGRRSAIHSSESSCSLPSILN-DNSGIKEAKPAVWLNSVPTRE 536
+ + L ++ G R + + P+I N + KE N R+
Sbjct: 166 QPRNYSHHQLNRSSKHSQGLRDQGNQEQD----PNISNGEEEEEKEPGEVGTHNDNQERK 221
Query: 537 QEVS-SGCGDKSKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSG 595
E+ K +++N +D + E++ + K + + + ++A + +
Sbjct: 222 TELPREHANSKQEEDNTQSDDILEESDQPTQVSKMQEDEFDQGNQEQEDNSNAEMEEENA 281
Query: 596 LNIGSGAFETKTANKIASEASFSSSEGSP----LSRHENKKKPVINLKSNALWDESDDSN 651
N+ NK E + S EG +S H+ ++ ++ L + +DD N
Sbjct: 282 SNV----------NKHIQETEWQSQEGKTGLEAISNHKETEEKTVS--EALLMEPTDDGN 329
Query: 652 SEIEAALRPRNHNTDDSDD 670
+ PRNH DD D
Sbjct: 330 TT------PRNHGVDDDGD 342
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.123 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,525,708
Number of Sequences: 37866
Number of extensions: 1352522
Number of successful extensions: 4405
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 269
Number of HSP's that attempted gapping in prelim test: 3947
Number of HSP's gapped (non-prelim): 648
length of query: 673
length of database: 18,247,518
effective HSP length: 109
effective length of query: 564
effective length of database: 14,120,124
effective search space: 7963749936
effective search space used: 7963749936
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.