C20orf19 2108

Name: C20orf19	Sequence: fasta or formatted (673aa)		NCBI GI: 118150654
Description: non-protein coding RNA 153 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {570aa} non-protein coding RNA 153 isoform 2 alt prot {540aa} non-protein coding RNA 153 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 38 2 C cysteine 1.8 12 1 D aspartate 5.5 37 2 E glutamate 11.3 76 5 F phenylalanine 1.5 10 1 G glycine 4.3 29 2 H histidine 3.1 21 1 I isoleucine 4.0 27 1 K lysine 8.3 56 3 L leucine 8.3 56 2 M methionine 1.3 9 1 N asparagine 5.1 34 1 P proline 4.9 33 2 Q glutamine 4.5 30 1 R arginine 4.8 32 2 S serine 12.8 86 3 T threonine 6.2 42 2 V valine 4.2 28 2 W tryptophan 0.7 5 1 Y tyrosine 1.8 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 non-protein coding RNA 153 isoform 1 C20orf19 0.842 non-protein coding RNA 153 isoform 2 C20orf19 0.797 non-protein coding RNA 153 isoform 3 DSPP 0.018 dentin sialophosphoprotein preproprotein PNN 0.015 pinin, desmosome associated protein NEFH 0.014 neurofilament, heavy polypeptide 200kDa NEFM 0.014 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.014 neurofilament, medium polypeptide 150kDa isoform 2 ... RAPGEF6 0.014 PDZ domain-containing guanine nucleotide exchange fa... WDR87 0.013 NYD-SP11 protein TIAM2 0.013 T-cell lymphoma invasion and metastasis 2 isoform b ... TIAM2 0.013 T-cell lymphoma invasion and metastasis 2 isoform a ... PRDM2 0.012 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.012 retinoblastoma protein-binding zinc finger protein i... C10orf18 0.011 hypothetical protein LOC54906 ANKRD12 0.011 ankyrin repeat domain 12 isoform 2 ANKRD12 0.011 ankyrin repeat domain 12 isoform 1 DCAF6 0.011 IQ motif and WD repeats 1 isoform a DNTTIP2 0.011 deoxynucleotidyltransferase, terminal, interacting p... LOC645202 0.011 PREDICTED: hypothetical protein LOC645202 EEA1 0.011 early endosome antigen 1, 162kD CCDC110 0.011 coiled-coil domain containing 110 isoform b CCDC110 0.011 coiled-coil domain containing 110 isoform a PHIP 0.011 pleckstrin homology domain interacting protein [Homo... MAP1B 0.011 microtubule-associated protein 1B CCDC30 0.010 coiled-coil domain containing 30 MSN 0.010 moesin HIRIP3 0.010 HIRA interacting protein 3 LOC440243 0.009 PREDICTED: Putative golgin subfamily A member 6-lik... SPARCL1 0.009 SPARC-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.