Guide to the Human Genome
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Search of human proteins with 239751820

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751820 PREDICTED: hypothetical protein [Homo sapiens]
         (144 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757315 PREDICTED: hypothetical protein [Homo sapiens]           307   2e-84
gi|239751820 PREDICTED: hypothetical protein [Homo sapiens]           307   2e-84
gi|239746311 PREDICTED: hypothetical protein XP_002343692 [Homo ...   307   2e-84
gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo ...    52   2e-07
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    51   3e-07
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]            50   7e-07
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]            49   1e-06
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]            49   1e-06
gi|40353727 synaptopodin isoform A [Homo sapiens]                      49   1e-06
gi|22027541 programmed cell death 7 [Homo sapiens]                     48   2e-06
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     48   3e-06
gi|31542493 D site of albumin promoter (albumin D-box) binding p...    46   9e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         45   2e-05
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ...    45   2e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    45   2e-05
gi|157168329 formin 1 [Homo sapiens]                                   44   4e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    44   6e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    44   6e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    44   6e-05
gi|55741677 SET domain containing 1A [Homo sapiens]                    44   6e-05
gi|32307166 Rho guanine exchange factor 15 [Homo sapiens]              44   6e-05
gi|45120115 hypothetical protein LOC56905 [Homo sapiens]               44   6e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni...    44   6e-05
gi|18959210 WIRE protein [Homo sapiens]                                44   6e-05
gi|222418647 mucin 7, secreted precursor [Homo sapiens]                43   8e-05
gi|222418649 mucin 7, secreted precursor [Homo sapiens]                43   8e-05
gi|222418645 mucin 7, secreted precursor [Homo sapiens]                43   8e-05
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]               43   8e-05
gi|153792074 proline rich 12 [Homo sapiens]                            43   8e-05
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]             43   1e-04

>gi|239757315 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 144

 Score =  307 bits (787), Expect = 2e-84
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60
           MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR
Sbjct: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60

Query: 61  PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRAR 120
           PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRAR
Sbjct: 61  PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRAR 120

Query: 121 RWGHPQDAQKGGSGHRLPSPPTQS 144
           RWGHPQDAQKGGSGHRLPSPPTQS
Sbjct: 121 RWGHPQDAQKGGSGHRLPSPPTQS 144


>gi|239751820 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 144

 Score =  307 bits (787), Expect = 2e-84
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60
           MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR
Sbjct: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60

Query: 61  PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRAR 120
           PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRAR
Sbjct: 61  PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRAR 120

Query: 121 RWGHPQDAQKGGSGHRLPSPPTQS 144
           RWGHPQDAQKGGSGHRLPSPPTQS
Sbjct: 121 RWGHPQDAQKGGSGHRLPSPPTQS 144


>gi|239746311 PREDICTED: hypothetical protein XP_002343692 [Homo
           sapiens]
          Length = 144

 Score =  307 bits (787), Expect = 2e-84
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60
           MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR
Sbjct: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60

Query: 61  PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRAR 120
           PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRAR
Sbjct: 61  PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRAR 120

Query: 121 RWGHPQDAQKGGSGHRLPSPPTQS 144
           RWGHPQDAQKGGSGHRLPSPPTQS
Sbjct: 121 RWGHPQDAQKGGSGHRLPSPPTQS 144


>gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo
           sapiens]
          Length = 351

 Score = 52.0 bits (123), Expect = 2e-07
 Identities = 54/169 (31%), Positives = 66/169 (39%), Gaps = 38/169 (22%)

Query: 6   AEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPT------------NWVSP----- 48
           A  P A P   P R P  AA AP    G  LP    P             +W        
Sbjct: 166 APAPAARPSPDPGRRPPPAAPAPVVHVGPVLPLLHDPVGVPLAPLGHGGVDWAENKERPR 225

Query: 49  -LQYRSSEDVSYRPQKAGPRSAIAP-----PQPPPAPPVPARARSPQPGPASRC-HSNAL 101
            L+ RS     +RP   G   +  P     P+P P P +P RAR PQPG   RC    A+
Sbjct: 226 RLRLRSQR---FRPPSPGAARSQLPETARRPRPRPRPALPRRAREPQPGSGRRCRRDTAV 282

Query: 102 R--SSIPSSAR---LASGGRRRARRWGHPQDAQKGGSGHRLP-SPPTQS 144
           R     P S+R   L   GR +   WGH        + HRL  SP ++S
Sbjct: 283 RWPRQAPYSSRGHDLERPGRCKTGLWGH-----SAHTSHRLRISPKSES 326


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 51.2 bits (121), Expect = 3e-07
 Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAP-APTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60
           PA DA+ PPAPP  PP  LP  A+ +P A     PLP  +  +    PL  +S       
Sbjct: 282 PAQDAQEPPAPP--PP--LPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPS-FQAP 336

Query: 61  PQKAGPRSAIAPPQPPPAPPVPARARSPQPG 91
           PQKAG ++  APP PP + P   + R  +PG
Sbjct: 337 PQKAGAQALPAPPAPPGSQPFLQKKRHGRPG 367



 Score = 36.2 bits (82), Expect = 0.010
 Identities = 43/156 (27%), Positives = 59/156 (37%), Gaps = 23/156 (14%)

Query: 9   PPAPPLGPPARLPVTAAAAP--APTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP-QKAG 65
           PP PP  PPA +    A  P  AP    P+P    P   + P  Y   +     P Q A 
Sbjct: 231 PPTPPPLPPASVLSDKAVKPQLAPLHLPPIPP---PLPLLPPCGYPGLKAEPASPAQDAQ 287

Query: 66  PRSAIAPPQPP----------PAPPVP---ARARSPQPGPASRCHSNALRSSIPSSARLA 112
              A  PP PP          PAPP+P   + + +P P P       A      + A  A
Sbjct: 288 EPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPA 347

Query: 113 ----SGGRRRARRWGHPQDAQKGGSGHRLPSPPTQS 144
                G +   ++  H +    GG  +  P+PP +S
Sbjct: 348 PPAPPGSQPFLQKKRHGRPGAGGGKLNPPPAPPARS 383



 Score = 35.8 bits (81), Expect = 0.013
 Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 20/104 (19%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
           P   A  PP PP  PP   P   +++P  T   PL         VSP    +  ++   P
Sbjct: 169 PNVPAPPPPTPPPPPPPLPPPLPSSSPIKT---PL---------VSPPGPLTKGNL---P 213

Query: 62  QKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSI 105
             A P     PP PPP PP P     P   PAS     A++  +
Sbjct: 214 VVAPPVPCAPPPPPPPPPPTP-----PPLPPASVLSDKAVKPQL 252



 Score = 32.0 bits (71), Expect = 0.18
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 10/99 (10%)

Query: 15  GPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRSAIAPPQ 74
           GP +R P  +   P  T   PL   + P    +   + ++     RP    P     PP 
Sbjct: 125 GPGSRAP--SPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPP 182

Query: 75  PPPAPPVPARARSP-------QPGPASRCHSNALRSSIP 106
           PPP PP P  + SP        PGP ++ +   +   +P
Sbjct: 183 PPPLPP-PLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVP 220



 Score = 31.6 bits (70), Expect = 0.24
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 70 IAPPQPPPAPPVPARARSPQPGPAS 94
          + PP PPP PP P    +P P P S
Sbjct: 3  VPPPPPPPLPPPPPPLGAPPPPPPS 27



 Score = 30.0 bits (66), Expect = 0.70
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 72  PPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPS--SARLA 112
           PP PPP PP+ A    P   P     +++LR + P   SA LA
Sbjct: 9   PPLPPPPPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLA 51



 Score = 26.6 bits (57), Expect = 7.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 72 PPQPPPAPPVPARARSPQPGPAS 94
          PP PP  PP P     P P P++
Sbjct: 6  PPPPPLPPPPPPLGAPPPPPPSA 28


>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 50.1 bits (118), Expect = 7e-07
 Identities = 40/106 (37%), Positives = 47/106 (44%), Gaps = 13/106 (12%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
           PA  A HPPAP    PA   ++A AA  P R  P P      +  SPL           P
Sbjct: 50  PAPAAAHPPAPR-ERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPL-----------P 97

Query: 62  QKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPS 107
               PR A A P  P   P+PAR  SP P P S     A +SS+P+
Sbjct: 98  PALQPRGAPAVPAAPSPGPLPARPSSPPPSPPSPPVPTA-QSSLPA 142


>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 41/111 (36%), Positives = 47/111 (42%), Gaps = 14/111 (12%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
           PA  A HPPAP    PA   ++A AA  P R  P P      +  SPL           P
Sbjct: 50  PAPAAAHPPAPR-ERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPL-----------P 97

Query: 62  QKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLA 112
               PR A A P  P   P+PAR  SP P P+    S   R  +P SA  A
Sbjct: 98  PALQPRGAPAVPAAPSPGPLPARPSSPPPRPS--LPSGPHRPVLPPSALAA 146



 Score = 34.3 bits (77), Expect = 0.037
 Identities = 30/86 (34%), Positives = 35/86 (40%), Gaps = 19/86 (22%)

Query: 1   MPAGDAEHPPAP--PLGPPAR-LPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDV 57
           +PA  +  PP P  P GP    LP +A AAP P   RPLP  S                V
Sbjct: 117 LPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLPQGS----------------V 160

Query: 58  SYRPQKAGPRSAIAPPQPPPAPPVPA 83
           + R Q+  PRS      P    PV A
Sbjct: 161 TAREQEQRPRSRRRAGAPEALGPVHA 186


>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 285

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 41/111 (36%), Positives = 47/111 (42%), Gaps = 14/111 (12%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
           PA  A HPPAP    PA   ++A AA  P R  P P      +  SPL           P
Sbjct: 50  PAPAAAHPPAPR-ERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPL-----------P 97

Query: 62  QKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLA 112
               PR A A P  P   P+PAR  SP P P+    S   R  +P SA  A
Sbjct: 98  PALQPRGAPAVPAAPSPGPLPARPSSPPPRPS--LPSGPHRPVLPPSALAA 146



 Score = 34.3 bits (77), Expect = 0.037
 Identities = 37/126 (29%), Positives = 48/126 (38%), Gaps = 19/126 (15%)

Query: 1   MPAGDAEHPPAP--PLGPPAR-LPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDV 57
           +PA  +  PP P  P GP    LP +A AAP P   RPLP  S                V
Sbjct: 117 LPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLPQGS----------------V 160

Query: 58  SYRPQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRR 117
           + R Q+  PRS      P    P   R  + +    S      L   + S+A + + G R
Sbjct: 161 TAREQEQRPRSRRRAGAPEALGPALTRIHNVEGSKDSWNCGQGLLLLMLSAAPVRTPGLR 220

Query: 118 RARRWG 123
            A   G
Sbjct: 221 LASSAG 226


>gi|40353727 synaptopodin isoform A [Homo sapiens]
          Length = 903

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 40/112 (35%), Positives = 50/112 (44%), Gaps = 17/112 (15%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRS 68
           PP PP  PP   P  +  + +P R  P      P+  +  L  R+  + + R + A PRS
Sbjct: 720 PPLPP--PPPMSPSWSERSVSPLR--PETEARPPSRQLQALLARNIINAARR-KSASPRS 774

Query: 69  A-----------IAPPQPPPAPPVPARARSPQPG-PASRCHSNALRSSIPSS 108
           A            APP PPP PP P R RSPQP  P S     A  + IP S
Sbjct: 775 AGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS 826



 Score = 34.7 bits (78), Expect = 0.028
 Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 17/90 (18%)

Query: 6   AEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAG 65
           A  PP PP  PP R+     A P         +   P +                P  AG
Sbjct: 788 APPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS----------------PLPAG 831

Query: 66  PRSAIAPPQPPPAPPVP-ARARSPQPGPAS 94
           P S  +P  P PAPP P    RSP     S
Sbjct: 832 PSSCTSPRSPLPAPPRPFLYRRSPTDSDVS 861



 Score = 27.3 bits (59), Expect = 4.5
 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 15/95 (15%)

Query: 57  VSYRPQKAGPRSAIA--PPQPPPAPPVPA---RARSP-----QPGPASRCHSNALRSSIP 106
           VS  P + G  S+++  PP PPP P  P+   R+ SP     +  P SR     L  +I 
Sbjct: 703 VSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNII 762

Query: 107 SSARLASGGRRRARRWGHPQDAQKGGSGHRLPSPP 141
           ++AR  S   R A       +  +  S  R P PP
Sbjct: 763 NAARRKSASPRSA-----GAENPRPFSPPRAPPPP 792


>gi|22027541 programmed cell death 7 [Homo sapiens]
          Length = 485

 Score = 48.1 bits (113), Expect = 2e-06
 Identities = 35/86 (40%), Positives = 41/86 (47%), Gaps = 9/86 (10%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSP---LQYRSSEDVSYRPQKAG 65
           PPAP   PP  LP  A   P P R  P P  S P  ++ P   LQ R+S + S   +  G
Sbjct: 21  PPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAP--FLQPPLALQPRASAEAS---RGGG 75

Query: 66  PRSAIAPPQPPPAPPVPARARSPQPG 91
              A  P  PPP PP P + R P PG
Sbjct: 76  GAGAFYPVPPPPLPPPPPQCR-PFPG 100


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 47.8 bits (112), Expect = 3e-06
 Identities = 33/91 (36%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRS 68
           PPAPP  P       AAAAP PT   P P    P    +P           R  +A   +
Sbjct: 108 PPAPPRAPRGAPAAAAAAAPPPTPAPPPP--PAPVAAAAPA----------RAPRAAAAA 155

Query: 69  AIAPPQPPPAPPVPARAR-----SPQPGPAS 94
           A APP P PA P P   R     +P P PA+
Sbjct: 156 ATAPPSPGPAQPGPRAQRAAPLAAPPPAPAA 186



 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 35/102 (34%), Positives = 42/102 (41%), Gaps = 22/102 (21%)

Query: 9   PPAP-PLGPPARLPVTAAAA------PAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
           PPAP     PAR P  AAAA      P P +  P   R+ P    +P    ++      P
Sbjct: 136 PPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPL--AAPPPAPAAPPAVAPP 193

Query: 62  QKAGPRSA-----------IAPPQPPPAPPVPARARSPQPGP 92
             AGPR A           + PP  PPAPP   +   PQP P
Sbjct: 194 --AGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQP 233



 Score = 36.2 bits (82), Expect = 0.010
 Identities = 37/122 (30%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 28  PAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR--PQKAGPRSAIAPPQPPPAP---PVP 82
           P P R R    +      V  + Y+ S  +SYR   +   PR    PP PP AP   P  
Sbjct: 64  PEPERTRAELEKLIQQRAVLRVSYKGS--ISYRNAARVQPPRRGATPPAPPRAPRGAPAA 121

Query: 83  ARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRARRWGHPQDAQKGGSGHR---LPS 139
           A A +P P PA       + ++ P+ A  A+     A     P  AQ G    R   L +
Sbjct: 122 AAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAP--PSPGPAQPGPRAQRAAPLAA 179

Query: 140 PP 141
           PP
Sbjct: 180 PP 181



 Score = 29.6 bits (65), Expect = 0.91
 Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 1/96 (1%)

Query: 49  LQYRSSEDVSYRPQKAGPRSA-IAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPS 107
           +Q R+   VSY+   +   +A + PP+    PP P RA    P  A+        +  P 
Sbjct: 77  IQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPP 136

Query: 108 SARLASGGRRRARRWGHPQDAQKGGSGHRLPSPPTQ 143
            A +A+    RA R            G   P P  Q
Sbjct: 137 PAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQ 172


>gi|31542493 D site of albumin promoter (albumin D-box) binding
           protein [Homo sapiens]
          Length = 325

 Score = 46.2 bits (108), Expect = 9e-06
 Identities = 44/131 (33%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRS----CPTNWVSPLQYRSSED 56
           +PA     P     GP A  P  A       RGRP P  +     P  W   L +    D
Sbjct: 58  LPAATTPGPGLETAGP-ADAPAGAVVGGGSPRGRPGPVPAPGLLAPLLWERTLPFG---D 113

Query: 57  VSYRPQKAGPRSAIAPPQPPPA-----PPVPARARSPQPGPASRCHSNALRSS---IPSS 108
           V Y    A       PP PPP       P PAR  +P PGP S C S + RSS    P+ 
Sbjct: 114 VEYVDLDAFLLEHGLPPSPPPPGGPSPEPSPARTPAPSPGPGS-CGSASPRSSPGHAPAR 172

Query: 109 ARLASGGRRRA 119
           A L +    RA
Sbjct: 173 AALGTASGHRA 183


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 46/163 (28%), Positives = 60/163 (36%), Gaps = 29/163 (17%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGR------------PLPYRSCPT--NWVS 47
           P G     P+PP   P R   + + AP P R R            P P R  P+   +  
Sbjct: 542 PRGRRRRSPSPP---PTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSP 598

Query: 48  PLQYRSSEDVSYRPQKAGPRSAIAPPQPP-----PAPPVPAR-ARSPQPGPASRCHSNAL 101
           P+Q R      Y P     R   +PP PP     P+PP   R + SP P   S   +   
Sbjct: 599 PIQRR------YSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRR 652

Query: 102 RSSIPSSARLASGGRRRARRWGHPQDAQKGGSGHRLPSPPTQS 144
             S+ S  R  S   R  R    PQ  ++     R  +P T S
Sbjct: 653 SPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSS 695



 Score = 38.5 bits (88), Expect = 0.002
 Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 19/154 (12%)

Query: 2   PAGDAEHPPAP----PLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVS--PLQYRSSE 55
           P  +  H P+P    P    +  PV   A+ +P R +     + P   VS  P   +  +
Sbjct: 676 PQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKK 735

Query: 56  DVSYRPQK----AGPRSAIAPPQP----PPAPPVPARARSPQPG-----PASRCHSNALR 102
             S  PQ     +  RS    P+P    PPAPP P +++SP        P  +  S    
Sbjct: 736 AASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPS 795

Query: 103 SSIPSSARLASGGRRRARRWGHPQDAQKGGSGHR 136
            S P ++    GG+++ ++        K    H+
Sbjct: 796 PSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHK 829



 Score = 32.3 bits (72), Expect = 0.14
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 17/99 (17%)

Query: 28  PAPTRGRPLPYRSCPTNWVSP------------LQYRSSEDVSYRPQKAGPRSAIAPPQP 75
           P+P R RP P R  P   + P             + RSS  +S     +    + +PP+ 
Sbjct: 315 PSPRR-RPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKK 373

Query: 76  PP----APPVPARARSPQPGPASRCHSNALRSSIPSSAR 110
           PP    +PP   R  SP   P  R H  +  ++ P   R
Sbjct: 374 PPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTR 412



 Score = 30.4 bits (67), Expect = 0.54
 Identities = 29/117 (24%), Positives = 40/117 (34%), Gaps = 22/117 (18%)

Query: 10  PAPPLGPPARLPVTAAAAPAPTRGR----PLPYRSCPTNWVSPLQYRSSEDVSYRPQKAG 65
           P+P   P  R        P P R R    P+  R   +  +S     SS   S  P K  
Sbjct: 315 PSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKP 374

Query: 66  PRSAIAPPQP------------------PPAPPVPARARSPQPGPASRCHSNALRSS 104
           P+   +PP+                   PPA P P    SP P  ++R   + +  S
Sbjct: 375 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVS 431


>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
           subunit [Homo sapiens]
          Length = 551

 Score = 45.1 bits (105), Expect = 2e-05
 Identities = 32/96 (33%), Positives = 35/96 (36%), Gaps = 9/96 (9%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
           PAG    PP PPLGPP   P      P P +  P P    P     P          +  
Sbjct: 231 PAGQT--PPRPPLGPPG--PPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQ 286

Query: 62  QKAGPRSAIAPPQ-----PPPAPPVPARARSPQPGP 92
              GP     PP      PPP PP P +   P PGP
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGP 322



 Score = 41.2 bits (95), Expect = 3e-04
 Identities = 33/103 (32%), Positives = 36/103 (34%), Gaps = 15/103 (14%)

Query: 1   MPAGDAEHPPAPPLGPPARLPV--TAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVS 58
           +P GD    PA P GPP   P   T    P    G P P    P   V P       +  
Sbjct: 211 VPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRG 270

Query: 59  YRPQKAGPRSAIAPPQP---------PPAPPVPARARSPQPGP 92
            RP    P   + P QP         PP PP P     P PGP
Sbjct: 271 DRP----PPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP 309



 Score = 35.0 bits (79), Expect = 0.022
 Identities = 26/85 (30%), Positives = 29/85 (34%), Gaps = 22/85 (25%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRS 68
           PP P  GPP          P P +G P P    P     PL               GP  
Sbjct: 298 PPVPGYGPPP-------GPPPPQQGPPPPPGPFPPRPPGPL---------------GPPL 335

Query: 69  AIAPPQPPPAPPVPARARSPQPGPA 93
            +APP   P PP  A   +P   PA
Sbjct: 336 TLAPPPHLPGPPPGAPPPAPHVNPA 360


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 45.1 bits (105), Expect = 2e-05
 Identities = 40/146 (27%), Positives = 47/146 (32%), Gaps = 23/146 (15%)

Query: 4   GDAEHPPAPPLGPPARLPVTAA---AAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60
           G    PPA    PPA  P + A   + P PT   P    S P                  
Sbjct: 120 GVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPG---------------A 164

Query: 61  PQKAGPRSAI--APPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRR 118
           P    P S +   PPQ    PP PA    P PGP         +           GG   
Sbjct: 165 PPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGL 224

Query: 119 ARRWGHPQDAQKGGS---GHRLPSPP 141
           +   GHP+   +GG    G R   PP
Sbjct: 225 STPGGHPKPPHRGGGEPRGGRQHHPP 250



 Score = 28.9 bits (63), Expect = 1.6
 Identities = 27/108 (25%), Positives = 35/108 (32%), Gaps = 19/108 (17%)

Query: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60
           M  G  +  P PP+ PP   P      P P +  P P +  P                  
Sbjct: 47  MGPGPGQSGPKPPIPPPP--PHQQQQQPPPQQ--PPPQQPPPHQ---------------P 87

Query: 61  PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSS 108
           P    P     PP PP     P  A+ P P P       A  S+ P++
Sbjct: 88  PPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPAT 135


>gi|157168329 formin 1 [Homo sapiens]
          Length = 1196

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 22/93 (23%)

Query: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAP--TRGRPLPYRSCPTNWVSPLQYRSSEDVS 58
           +P   A  PP PPL  P+ L   + A P P  + G PLP    P                
Sbjct: 645 LPPPPASIPPPPPL--PSGLGSLSPAPPMPPVSAGPPLPPPPPP---------------- 686

Query: 59  YRPQKAGPRSAIAPPQPPPAPPVPARARSPQPG 91
             P    P S+  PP PPP PP+P     P PG
Sbjct: 687 --PPPLPPPSSAGPPPPPPPPPLPNSPAPPNPG 717


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 15/152 (9%)

Query: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRS-SEDVSY 59
           +P+  A  P   P  P A LP++  A P P   +  P  + P   V P    S +     
Sbjct: 531 LPSPPASFPGQAPFSPSASLPMSPLATPPP---QAPPVLAAPLLQVPPSPPASPTLQAPR 587

Query: 60  RPQKAGPRSAIAPPQ------PPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLAS 113
           RP   GP ++++ P+      P P PP      S   GP    HS++  +S P   R   
Sbjct: 588 RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSS-ATSTPEELRGYD 646

Query: 114 GGRRRARRWGHPQDAQKG----GSGHRLPSPP 141
            G         P DA+       +  R P+PP
Sbjct: 647 SGPEGGAAASPPPDAELAACHPAAWSRGPAPP 678



 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 7/88 (7%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRS 68
           P +PP  PP + P +  A+P  +     P ++ P+    PLQ   S   S  P  +   S
Sbjct: 439 PFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS--PPMS--PS 494

Query: 69  AIAPPQPPP---APPVPARARSPQPGPA 93
           A  PPQ PP   APP+      PQ  PA
Sbjct: 495 ATPPPQAPPPLAAPPLQLAKPPPQAPPA 522



 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 34/113 (30%), Positives = 42/113 (37%), Gaps = 29/113 (25%)

Query: 9   PPAPPLGPPARLPVTAAA-APAPTRGRPL-----PYRSCPTNWVSPLQYRSSEDVSY--- 59
           PP+PP  PP     T    AP P    PL     P ++ P     PLQ   S   S+   
Sbjct: 482 PPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQ 541

Query: 60  ---RPQKAGPRSAIA-----------------PPQPPPAPPVPARARSPQPGP 92
               P  + P S +A                 PP PP +P + A  R P PGP
Sbjct: 542 APFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGP 594



 Score = 39.3 bits (90), Expect = 0.001
 Identities = 32/87 (36%), Positives = 37/87 (42%), Gaps = 9/87 (10%)

Query: 10  PAPPLGPPARLPVTAAAAPA--PTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPR 67
           P+PPL P A  P  A  A A  P +  P P  S P   +SPL   S +     P      
Sbjct: 382 PSPPLSPLATPPPQAPPALALPPLQAPPSPPASPP---LSPLATPSPQ----APNALAVH 434

Query: 68  SAIAPPQPPPAPPVPARARSPQPGPAS 94
              AP  PPP+PPV A    P   P S
Sbjct: 435 LLQAPFSPPPSPPVQAPFSPPASPPVS 461



 Score = 35.8 bits (81), Expect = 0.013
 Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 15/98 (15%)

Query: 9   PP--APPLGPPARLPVTAAAAPAPTRGRPL-------PYRSCPTNWV-SPLQYRSSEDVS 58
           PP  APP  PPA  P++  A P+P     L       P+   P+  V +P    +S  VS
Sbjct: 403 PPLQAPP-SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS 461

Query: 59  ---YRPQKAGPRSAIAPPQPPPAPPV-PARARSPQPGP 92
                P +A P  A  P Q PP+PP  P  + S  P P
Sbjct: 462 PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 499



 Score = 35.0 bits (79), Expect = 0.022
 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 5/96 (5%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVS-PLQYRSSEDVSYR 60
           P+   + P +PP  PP     T  +   P+   P P +  P+   S P+   ++      
Sbjct: 444 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP-PLQVPPSPPASPPMSPSATPPPQAP 502

Query: 61  PQKAGPRSAIA--PPQPPPAPPVPARARSPQPGPAS 94
           P  A P   +A  PPQ PPA   P     P P PAS
Sbjct: 503 PPLAAPPLQLAKPPPQAPPALATPPLQALPSP-PAS 537



 Score = 34.3 bits (77), Expect = 0.037
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 6   AEHPPAPPLGPPARLPVTAAAAP-----APTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60
           A  P +P   PP++ P + AA P     +P    P+   + P     P        ++  
Sbjct: 456 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 515

Query: 61  PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPAS 94
           P +A P  A  P Q  P+PP     ++P    AS
Sbjct: 516 PPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 549



 Score = 29.3 bits (64), Expect = 1.2
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)

Query: 13  PLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDV-SYRPQKAGPRSAIA 71
           PL PP+       +AP   +  P P  + P+   + L   + +   S+ P       A  
Sbjct: 339 PLAPPS------PSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATP 392

Query: 72  PPQPPPAPPVPARARSPQPGPAS 94
           PPQ PPA  +P     P P PAS
Sbjct: 393 PPQAPPALALPPLQAPPSP-PAS 414


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 15/152 (9%)

Query: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRS-SEDVSY 59
           +P+  A  P   P  P A LP++  A P P   +  P  + P   V P    S +     
Sbjct: 800 LPSPPASFPGQAPFSPSASLPMSPLATPPP---QAPPVLAAPLLQVPPSPPASPTLQAPR 856

Query: 60  RPQKAGPRSAIAPPQ------PPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLAS 113
           RP   GP ++++ P+      P P PP      S   GP    HS++  +S P   R   
Sbjct: 857 RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSS-ATSTPEELRGYD 915

Query: 114 GGRRRARRWGHPQDAQKG----GSGHRLPSPP 141
            G         P DA+       +  R P+PP
Sbjct: 916 SGPEGGAAASPPPDAELAACHPAAWSRGPAPP 947



 Score = 41.2 bits (95), Expect = 3e-04
 Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 8/100 (8%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAP-----APTRGRPLPYRSCPTNWVSPLQYRSSED 56
           P+  A  P +P   PP + P   AA P     +P    P+   + P   V PL       
Sbjct: 708 PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQ 767

Query: 57  VSYRPQKAGPRSAIA--PPQPPPAPPVPARARSPQPGPAS 94
           V   P  + P S +A  PPQ PPA   P     P P PAS
Sbjct: 768 VPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSP-PAS 806



 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 8/92 (8%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVS-------YRP 61
           P +PP  PP + P +  A+P  +     P ++ P+    PLQ   S   S         P
Sbjct: 664 PFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPP 723

Query: 62  QKAGPRSAIAPPQPPPAPPV-PARARSPQPGP 92
            +A P  A  P Q PP+PP  P  + S  P P
Sbjct: 724 PQAPPPLAAPPLQVPPSPPASPPMSPSATPPP 755



 Score = 40.0 bits (92), Expect = 7e-04
 Identities = 35/125 (28%), Positives = 47/125 (37%), Gaps = 34/125 (27%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAP-----APTRGRPL------PYRSCPTNWVSPLQ 50
           P+  A  P +P   PP R+P   AA P     +P    P+      P ++ P     PLQ
Sbjct: 739 PSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQ 798

Query: 51  YRSSEDVSY------RPQKAGPRSAIA-----------------PPQPPPAPPVPARARS 87
              S   S+       P  + P S +A                 PP PP +P + A  R 
Sbjct: 799 ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRP 858

Query: 88  PQPGP 92
           P PGP
Sbjct: 859 PTPGP 863



 Score = 39.3 bits (90), Expect = 0.001
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 9   PPAPPL----GPPARLPVTAAAAP---APTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
           PP+PP+     PPA  PV+ +A P   AP      P +  P+   SP    S+      P
Sbjct: 668 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 727

Query: 62  QKAGPRSAIAPPQPPPAPPVPARARSPQPGP 92
                     PP PP +PP+   A  P   P
Sbjct: 728 PPLAAPPLQVPPSPPASPPMSPSATPPPRVP 758



 Score = 37.4 bits (85), Expect = 0.004
 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 22/83 (26%)

Query: 11  APPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRSAI 70
           AP LGP +  P+ A  +P+ T+ RP+P    P N  +PL                   A 
Sbjct: 293 APALGPLSSSPL-ATPSPSGTKARPVPP---PDNAATPLP------------------AT 330

Query: 71  APPQPPPAPPVPARARSPQPGPA 93
            PP PP A P+P    SP   P+
Sbjct: 331 LPPSPPLATPLPLAPPSPSAPPS 353



 Score = 37.4 bits (85), Expect = 0.004
 Identities = 31/87 (35%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 10  PAPPLGPPARLPVTAAAAPA--PTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPR 67
           P+PPL P A  P  A    A  P +  P P  S P   +SPL   S +     P      
Sbjct: 607 PSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPP---LSPLATPSPQ----APNALAVH 659

Query: 68  SAIAPPQPPPAPPVPARARSPQPGPAS 94
              AP  PPP+PPV A    P   P S
Sbjct: 660 LLQAPFSPPPSPPVQAPFSPPASPPVS 686



 Score = 35.8 bits (81), Expect = 0.013
 Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 15/98 (15%)

Query: 9   PP--APPLGPPARLPVTAAAAPAPTRGRPL-------PYRSCPTNWV-SPLQYRSSEDVS 58
           PP  APP  PPA  P++  A P+P     L       P+   P+  V +P    +S  VS
Sbjct: 628 PPLQAPP-SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS 686

Query: 59  ---YRPQKAGPRSAIAPPQPPPAPPV-PARARSPQPGP 92
                P +A P  A  P Q PP+PP  P  + S  P P
Sbjct: 687 PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 724



 Score = 32.7 bits (73), Expect = 0.11
 Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 11/94 (11%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
           P+G    P  PP    A  P+ A   P+P    PLP    P +  +P   ++       P
Sbjct: 309 PSGTKARPVPPP--DNAATPLPATLPPSPPLATPLPL--APPSPSAPPSLQTLPSPPATP 364

Query: 62  QKAGPRSAIAPP-QPPPA----PP--VPARARSP 88
               P S   PP Q PP+    PP  VP    SP
Sbjct: 365 PSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSP 398



 Score = 32.3 bits (72), Expect = 0.14
 Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 13/99 (13%)

Query: 2   PAGDAEHPP--APP--LGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDV 57
           P   +  PP  APP    PP ++P +  A+P  +     P ++ P     PLQ   S   
Sbjct: 684 PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPS--- 740

Query: 58  SYRPQKAGPRSAIA--PPQPPPAPPVPARARSPQPGPAS 94
              P  + P S  A  PP+ PP    P     P P PAS
Sbjct: 741 ---PPASPPMSPSATPPPRVPPLLAAPPLQVPPSP-PAS 775



 Score = 30.8 bits (68), Expect = 0.41
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRS 68
           PP+PPL  P  L   + +AP   +  P P  + P+        ++   ++  P +A P  
Sbjct: 332 PPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPS--------QAPPSMTTPPMQAPPSL 383

Query: 69  AIAPP-QPPPAPPVPARARSPQP 90
              PP Q P +   P+    P P
Sbjct: 384 QTIPPIQVPHSLTSPSLQAPPSP 406



 Score = 30.8 bits (68), Expect = 0.41
 Identities = 30/92 (32%), Positives = 35/92 (38%), Gaps = 11/92 (11%)

Query: 2   PAGDAEHPPA---PPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVS 58
           P      PP    P L PP   P+  A+AP  T     P   CP     PLQ   S  ++
Sbjct: 526 PPASLTTPPLENLPSLAPP---PLQTASAPLTTPHLETP--PCPAP--CPLQAPPSP-LT 577

Query: 59  YRPQKAGPRSAIAPPQPPPAPPVPARARSPQP 90
             P +     A  PPQ PPA   P     P P
Sbjct: 578 TPPPETPSSIATPPPQAPPALASPPLQGLPSP 609


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 15/152 (9%)

Query: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRS-SEDVSY 59
           +P+  A  P   P  P A LP++  A P P   +  P  + P   V P    S +     
Sbjct: 492 LPSPPASFPGQAPFSPSASLPMSPLATPPP---QAPPVLAAPLLQVPPSPPASPTLQAPR 548

Query: 60  RPQKAGPRSAIAPPQ------PPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLAS 113
           RP   GP ++++ P+      P P PP      S   GP    HS++  +S P   R   
Sbjct: 549 RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSS-ATSTPEELRGYD 607

Query: 114 GGRRRARRWGHPQDAQKG----GSGHRLPSPP 141
            G         P DA+       +  R P+PP
Sbjct: 608 SGPEGGAAASPPPDAELAACHPAAWSRGPAPP 639



 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRS 68
           P +PP  PP + P +  A+P  +     P ++ P+    PLQ   S   S       P S
Sbjct: 400 PFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS---PPMSP-S 455

Query: 69  AIAPPQPPP---APPVPARARSPQPGPA 93
           A  PPQ PP   APP+      PQ  PA
Sbjct: 456 ATPPPQAPPPLAAPPLQLAKPPPQAPPA 483



 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 34/113 (30%), Positives = 42/113 (37%), Gaps = 29/113 (25%)

Query: 9   PPAPPLGPPARLPVTAAA-APAPTRGRPL-----PYRSCPTNWVSPLQYRSSEDVSY--- 59
           PP+PP  PP     T    AP P    PL     P ++ P     PLQ   S   S+   
Sbjct: 443 PPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQ 502

Query: 60  ---RPQKAGPRSAIA-----------------PPQPPPAPPVPARARSPQPGP 92
               P  + P S +A                 PP PP +P + A  R P PGP
Sbjct: 503 APFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGP 555



 Score = 39.3 bits (90), Expect = 0.001
 Identities = 32/87 (36%), Positives = 37/87 (42%), Gaps = 9/87 (10%)

Query: 10  PAPPLGPPARLPVTAAAAPA--PTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPR 67
           P+PPL P A  P  A  A A  P +  P P  S P   +SPL   S +     P      
Sbjct: 343 PSPPLSPLATPPPQAPPALALPPLQAPPSPPASPP---LSPLATPSPQ----APNALAVH 395

Query: 68  SAIAPPQPPPAPPVPARARSPQPGPAS 94
              AP  PPP+PPV A    P   P S
Sbjct: 396 LLQAPFSPPPSPPVQAPFSPPASPPVS 422



 Score = 35.8 bits (81), Expect = 0.013
 Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 15/98 (15%)

Query: 9   PP--APPLGPPARLPVTAAAAPAPTRGRPL-------PYRSCPTNWV-SPLQYRSSEDVS 58
           PP  APP  PPA  P++  A P+P     L       P+   P+  V +P    +S  VS
Sbjct: 364 PPLQAPP-SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS 422

Query: 59  ---YRPQKAGPRSAIAPPQPPPAPPV-PARARSPQPGP 92
                P +A P  A  P Q PP+PP  P  + S  P P
Sbjct: 423 PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 460



 Score = 35.0 bits (79), Expect = 0.022
 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 5/96 (5%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVS-PLQYRSSEDVSYR 60
           P+   + P +PP  PP     T  +   P+   P P +  P+   S P+   ++      
Sbjct: 405 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP-PLQVPPSPPASPPMSPSATPPPQAP 463

Query: 61  PQKAGPRSAIA--PPQPPPAPPVPARARSPQPGPAS 94
           P  A P   +A  PPQ PPA   P     P P PAS
Sbjct: 464 PPLAAPPLQLAKPPPQAPPALATPPLQALPSP-PAS 498



 Score = 34.3 bits (77), Expect = 0.037
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 6   AEHPPAPPLGPPARLPVTAAAAP-----APTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60
           A  P +P   PP++ P + AA P     +P    P+   + P     P        ++  
Sbjct: 417 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 476

Query: 61  PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPAS 94
           P +A P  A  P Q  P+PP     ++P    AS
Sbjct: 477 PPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 510



 Score = 30.4 bits (67), Expect = 0.54
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 10/93 (10%)

Query: 11  APPLGPPARLPVTA---AAAPAPT-----RGRPLPYRSCPTNWVSPLQYRSSEDV-SYRP 61
           AP LGP +  P+     +A P+P+     +  P P  + P+   + L   + +   S+ P
Sbjct: 284 APALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLP 343

Query: 62  QKAGPRSAIAPPQPPPAPPVPARARSPQPGPAS 94
                  A  PPQ PPA  +P     P P PAS
Sbjct: 344 SPPLSPLATPPPQAPPALALPPLQAPPSP-PAS 375



 Score = 28.1 bits (61), Expect = 2.7
 Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 19/121 (15%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPA----PTRGRPL-------PYRSCPTNWVSPLQ 50
           PA  +    A PL  PAR   +A   P     P++ +P        P  + P    +P  
Sbjct: 228 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 287

Query: 51  YRSSEDVSYRPQKAGPRSAIAPP--QPPPAPPV--PARARSPQPGPASRCHSNALRSSIP 106
              S      P  + P S  APP  Q  P+PP   P++A +    P  +    A  S +P
Sbjct: 288 GPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQ----ATHSFLP 343

Query: 107 S 107
           S
Sbjct: 344 S 344


>gi|55741677 SET domain containing 1A [Homo sapiens]
          Length = 1707

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 43/132 (32%), Positives = 57/132 (43%), Gaps = 21/132 (15%)

Query: 2    PAGDAEH-PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60
            PAG  E  PP+ PL PP   P     APAP   RP    S P   + P + R  + VS+ 
Sbjct: 1118 PAGPTEESPPSAPLRPPE--PPAGPPAPAP---RPDERPSSPIPLLPPPKKRR-KTVSFS 1171

Query: 61   PQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRAR 120
              +  P      P+PPPA P  A+     PGPASR     +  +I     L        +
Sbjct: 1172 AIEVVPA-----PEPPPATPPQAKF----PGPASRKAPRGVERTI---RNLPLDHASLVK 1219

Query: 121  RWGHPQDAQKGG 132
             W  P++  +GG
Sbjct: 1220 SW--PEEVSRGG 1229



 Score = 39.7 bits (91), Expect = 9e-04
 Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 1   MPAGDAEHPPAPPLGPPARLPV--TAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVS 58
           +P+G    P  PP  P     V  T +  P  TR  P   ++   N  SP       ++S
Sbjct: 530 VPSGSGHGPCTPPPAPANFEDVAPTGSGEPGATRESP---KANGQNQASPCSSGDDMEIS 586

Query: 59  YRPQKAGPRSAIAPPQPPPAPPVPARARSPQPGP 92
              +   P  A  PPQ PP PP P     P P P
Sbjct: 587 DDDRGGSPPPAPTPPQQPPPPPPP-----PPPPP 615



 Score = 38.1 bits (87), Expect = 0.003
 Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 11/91 (12%)

Query: 5    DAEHPPAPPLG--PPARLPVTAAA---APAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSY 59
            + E P A P    PP  +PV   A    P P R    P    P    SP +     + S 
Sbjct: 1067 EEERPAALPSASPPPREVPVPTPAPVEVPVPERVAGSPVTPLPEQEASPARPAGPTEES- 1125

Query: 60   RPQKAGPRSAIAPPQPPPAPPVPARARSPQP 90
                  P + + PP+PP  PP PA     +P
Sbjct: 1126 -----PPSAPLRPPEPPAGPPAPAPRPDERP 1151



 Score = 30.4 bits (67), Expect = 0.54
 Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 6/67 (8%)

Query: 16  PPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKA-GPRSAIAPPQ 74
           PPA  P      P P    P PY +       PL Y   +     P +  GP     PP 
Sbjct: 595 PPAPTPPQQPPPPPPPPPPPPPYLAS-----LPLGYPPHQPAYLLPPRPDGPPPPEYPPP 649

Query: 75  PPPAPPV 81
           PPP P +
Sbjct: 650 PPPPPHI 656



 Score = 29.3 bits (64), Expect = 1.2
 Identities = 33/121 (27%), Positives = 41/121 (33%), Gaps = 30/121 (24%)

Query: 8   HPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPR 67
           H   PP       P  A  A       P  Y    T+++ P   R + D  YRP    P 
Sbjct: 379 HTSYPPRRATREEPPGAPFAENTAERFPPSY----TSYLPPEPSRPT-DQDYRP----PA 429

Query: 68  SAIAPPQPP---------------------PAPPVPARARSPQPGPASRCHSNALRSSIP 106
           S   PP+PP                     P P  PAR+ SP P   +     A  SS+ 
Sbjct: 430 SEAPPPEPPEPGGGGGGGGPSPEREEVRTSPRPASPARSGSPAPETTNESVPFAQHSSLD 489

Query: 107 S 107
           S
Sbjct: 490 S 490


>gi|32307166 Rho guanine exchange factor 15 [Homo sapiens]
          Length = 841

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 16/120 (13%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRS 68
           PPA  L PPA LP +A+ A   ++  P    S PT   SP+  RS+      P+ A PRS
Sbjct: 65  PPAASLKPPALLPPSASRASLDSQTSPDSPSSTPT--PSPVSRRSAS-----PEPA-PRS 116

Query: 69  AIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRARRWGHPQDA 128
            + PP+P  +P  P     P  G  ++   N   S+  +  RLA  GR      G  QDA
Sbjct: 117 PVPPPKPSGSPCTPL---LPMAGVLAQ---NGSASAPGTVRRLA--GRFEGGAEGRAQDA 168


>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
          Length = 1047

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 36/91 (39%), Positives = 41/91 (45%), Gaps = 10/91 (10%)

Query: 10  PAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRSA 69
           PAP   P A +P T  +APAPT+  P P  S P       Q   S         + P  A
Sbjct: 659 PAPL--PAAVVPSTPTSAPAPTQPAPTP-TSGPIGLRILAQQPLSVTCFSLALPSPPAVA 715

Query: 70  IAPPQPPPAP-PVPARA------RSPQPGPA 93
           +A P P PAP P PARA      R P P PA
Sbjct: 716 VASPAPAPAPSPAPARAQAPASARDPAPAPA 746



 Score = 30.8 bits (68), Expect = 0.41
 Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 14/111 (12%)

Query: 33  GRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRSAIAPPQPPPAPPV-------PARA 85
           G P+  R  P     P     + +    PQK   R    PP  PP P +       P R 
Sbjct: 459 GPPIVIRDSPVPCTPPALPPCARECQSLPQKEDAR----PPSSPPMPVIDNVFSLAPYRD 514

Query: 86  RSPQPGPASRCHSNALRSSIPSSARLASGGRRRARRWGHPQDAQKGGSGHR 136
               P P +    ++  +  P SA   S G+ +  R   P  AQ+G SG +
Sbjct: 515 YLDVPAPEATTEPDSATAE-PDSAPATSEGQDKGCRGTLP--AQEGPSGSK 562


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 10/118 (8%)

Query: 2    PAGDAEHPPAPPLGP---PARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVS 58
            P GD   P   PL P   PA  PVT   A  P++G   P    P +        + +   
Sbjct: 1398 PKGDPTSPAVIPLSPKKAPAT-PVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGP 1456

Query: 59   YRPQKAGPRS--AIAPPQP--PPAPPVPARARSPQPGPASRCHSNA--LRSSIPSSAR 110
              P   G  +  A+ PP P  PPAP   A + SP+  PA+     A  L + IPSS +
Sbjct: 1457 ATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPK 1514



 Score = 37.4 bits (85), Expect = 0.004
 Identities = 35/150 (23%), Positives = 51/150 (34%), Gaps = 9/150 (6%)

Query: 2    PAGDAEHPPAPPLGP----PARLPVTAAAAPAPTRGRPL--PYRSCPTNWVSPLQYRSSE 55
            P   A  PP+P  GP    P   P   AA P   +G P     +  PT   +        
Sbjct: 940  PTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGG 999

Query: 56   DVSYRPQKAGPRSAIAPPQP---PPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLA 112
              +  P+ A    A+ PP P   P A P P  A +P          +   + +P  A   
Sbjct: 1000 PATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTT 1059

Query: 113  SGGRRRARRWGHPQDAQKGGSGHRLPSPPT 142
                  + + G    + KG       +PP+
Sbjct: 1060 PAATLPSPKGGPATPSLKGAPTPPAATPPS 1089



 Score = 35.4 bits (80), Expect = 0.017
 Identities = 30/105 (28%), Positives = 38/105 (36%), Gaps = 18/105 (17%)

Query: 2    PAGDAEHPPAPPLG----PPARLPVTAAAAPAPTRGRPL--PYRSCPTN-WVSPLQYRSS 54
            P   A  PP+P  G     P   P T AA P   +G P   P +  PT    +P   +  
Sbjct: 1218 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGG 1277

Query: 55   EDVSYRPQKAGPRSAIAPP---------QPPPAPPVPARARSPQP 90
              ++  P K  P  A+  P          PP   P P  A  P P
Sbjct: 1278 --LATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSP 1320



 Score = 35.0 bits (79), Expect = 0.022
 Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 14/101 (13%)

Query: 2    PAGDAEHPPAPP----LGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSE-- 55
            P   A  PP+P       PP   P   A  P   +G P    + P++   P    S E  
Sbjct: 1310 PTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGP 1369

Query: 56   --DVSYRPQKAGPRSAIAPPQPPPAPPVPARARSPQPGPAS 94
                +    K GP  A+ PP P   P +P    SP+  P S
Sbjct: 1370 TPPAATPSHKGGP--AMTPPSPKRGPAIP----SPKGDPTS 1404



 Score = 34.7 bits (78), Expect = 0.028
 Identities = 27/102 (26%), Positives = 36/102 (35%), Gaps = 16/102 (15%)

Query: 8   HPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPR 67
           H P PP   P   P  +A  P   +G  LP +  PT  V  L +              P+
Sbjct: 854 HSPTPP--SPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPF--------------PK 897

Query: 68  SAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSA 109
              A P P  AP +   + SP+   A+        S  P  A
Sbjct: 898 EGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGA 939



 Score = 33.9 bits (76), Expect = 0.048
 Identities = 34/141 (24%), Positives = 48/141 (34%), Gaps = 16/141 (11%)

Query: 2    PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
            P   A  PP+P  GP    P  A   PA T   P    + P +  +P    ++       
Sbjct: 1080 PTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAAT------- 1132

Query: 62   QKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRARR 121
                P+  +A P P  AP  PA A  P P          L +  P  A         + +
Sbjct: 1133 -PPSPKGGLATPPPKGAPTTPA-ATPPSP-------KGGLATPPPKGAPTTPAATPPSPK 1183

Query: 122  WGHPQDAQKGGSGHRLPSPPT 142
             G    + KG       +PP+
Sbjct: 1184 GGLATPSPKGAPTTPAATPPS 1204



 Score = 33.9 bits (76), Expect = 0.048
 Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 17/86 (19%)

Query: 9    PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRS 68
            PP+P  GP    P  A   PA T   P      P                  P+ A    
Sbjct: 1294 PPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPP-----------------PKGAPTPP 1336

Query: 69   AIAPPQPPPAPPVPARARSPQPGPAS 94
            A+ PP P   P +PA   S + GP +
Sbjct: 1337 AVTPPSPKGTPTLPATTPSSKGGPTT 1362



 Score = 32.7 bits (73), Expect = 0.11
 Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 8/100 (8%)

Query: 2    PAGDAEHPPAPPLG----PPARLPVTAAAAPAPTRG---RPLPYRSCPTNWVSPLQYRSS 54
            P   A  PP+P  G     P   P T AA P   +G    P P +  PT   +       
Sbjct: 1172 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP-KGAPTTPAATPPSPKG 1230

Query: 55   EDVSYRPQKAGPRSAIAPPQPPPAPPVPARARSPQPGPAS 94
               +  P+ A    A  PP P   P  P    +P P  A+
Sbjct: 1231 GLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAAT 1270



 Score = 32.3 bits (72), Expect = 0.14
 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 2    PAGDAEHPPAPPLGP-PARLPVTAAA--APAPTRGRPLPYRSCPTNWVSPLQYRSSEDV- 57
            PA     P   P  P P   P T ++  A +P    P  Y+  P    SP +      V 
Sbjct: 1551 PAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAP----SPKELLIPPAVT 1606

Query: 58   SYRPQKAGPRSAIAPPQPPPAPPVPARARSPQPGPAS 94
            S  P++A    A+ PP P   P  PA   +P   P +
Sbjct: 1607 SPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVT 1643



 Score = 30.8 bits (68), Expect = 0.41
 Identities = 36/133 (27%), Positives = 45/133 (33%), Gaps = 49/133 (36%)

Query: 5    DAEHPPAPPLGPP---ARLPVTAAA-------------APAPTRGRPLPYRSCPTNWVSP 48
            DA H P  PL PP   A  P+TAAA             + AP+    LP    P   + P
Sbjct: 1753 DASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPP 1812

Query: 49   LQYRSSEDVSYRPQKAG-----PRSAIAP-------PQPPPAP--------------PVP 82
             Q        + P   G     P   +AP       P  PP P              P P
Sbjct: 1813 KQ-------QFLPSSPGLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTP 1865

Query: 83   ARARSPQPGPASR 95
              A  P P P+++
Sbjct: 1866 KSAGIPVPTPSAK 1878



 Score = 28.1 bits (61), Expect = 2.7
 Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 7/60 (11%)

Query: 10  PAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRSA 69
           P  PL P A L   +        G PLP     ++  SPL   SS  V      AGP SA
Sbjct: 580 PEIPLSPEATLAKKSL-------GEPLPIGKPASSMTSPLGVNSSASVIKTDSYAGPDSA 632



 Score = 26.9 bits (58), Expect = 5.9
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 28   PAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRSAIAPPQPPPAPPVPARARS 87
            P+   G   P  +     + P+Q  SS+    +     P+  +APP+   + P+ A A  
Sbjct: 1720 PSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFE 1779

Query: 88   ---PQPGPAS 94
               P+P  AS
Sbjct: 1780 KVLPKPESAS 1789


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 47/158 (29%), Positives = 56/158 (35%), Gaps = 26/158 (16%)

Query: 7   EHPPAPPLGPPARLPVTAAAAPA--PTRGRPLPYR---------SCPTNWVSP-LQYRSS 54
           E PPAPP   P   PV     P+       P PYR         S PTN  +P L  R +
Sbjct: 222 EGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNESAPELPQRHN 281

Query: 55  EDVSYRPQKAGPRSAIAPPQPPPA--------PPVPAR---ARSPQPGPASRCHSNALRS 103
              S   +  GP   +APP P  A        PP PAR   +R   P P      N  R 
Sbjct: 282 ---SLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARD 338

Query: 104 SIPSSARLASGGRRRARRWGHPQDAQKGGSGHRLPSPP 141
           + P        G     R   P    +  +G   P PP
Sbjct: 339 APPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPP 376



 Score = 39.3 bits (90), Expect = 0.001
 Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 18/118 (15%)

Query: 9   PPAPPLG-----PPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQ- 62
           PP PP G     PP  LP+ ++ APA  R +PLP    P   + P +         +P  
Sbjct: 177 PPPPPPGRRANAPPTPLPMHSSKAPAYNREKPLP--PTPGQRLHPGREGPPAPPPVKPPP 234

Query: 63  -----KAGPR-SAIAPPQPP--PAPPVPARARSP--QPGPASRCHSNALRSSIPSSAR 110
                + GP   ++APP PP    P VP    SP  +  P      N+L    P   R
Sbjct: 235 SPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNESAPELPQRHNSLHRKTPGPVR 292



 Score = 34.7 bits (78), Expect = 0.028
 Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 15/111 (13%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYR--------- 52
           P+G +  PP PP   P  +P    ++P       LP R    +  +P   R         
Sbjct: 243 PSGQSLAPPPPPYRQPPGVP-NGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTS 301

Query: 53  -SSEDVSYRPQKAG---PRSAIAPPQPPPAPPVPARARSPQPGPASRCHSN 99
            S   +S RP       P    APP PPP     AR  +P P P  R H +
Sbjct: 302 ASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGAR-DAPPPPPPYRMHGS 351



 Score = 32.3 bits (72), Expect = 0.14
 Identities = 25/73 (34%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 12  PPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPRSAIA 71
           PP  PPAR P +  AAP P    P+           P  YR          K  P  +  
Sbjct: 311 PP--PPARDPPSRGAAPPPPP--PVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRT 366

Query: 72  PPQPPPAPPVPAR 84
           P  PPP PP P R
Sbjct: 367 PAGPPPPPPPPLR 379


>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
          Length = 377

 Score = 43.1 bits (100), Expect = 8e-05
 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 11/106 (10%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAG--- 65
           PP PP   PA  P +++A P  T   P P  + P    +PL   +  + +  P       
Sbjct: 215 PPTPPATTPA--PPSSSAPPETTAAPPTPSATTP----APLSSSAPPETTAVPPTPSATT 268

Query: 66  --PRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSA 109
             P SA APP+   APP P+      P   +   + A   + P+S+
Sbjct: 269 LDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSS 314



 Score = 33.9 bits (76), Expect = 0.048
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 13  PLGPPARLPVTAAAAPAPTRGRPLP-YRSCPTNWVSPLQYRSSEDVSYRPQKAGPRSAIA 71
           P+  PA    TAA  P P+   P P   S P    +     S+   +     A P +  A
Sbjct: 156 PVNSPAPQDTTAAP-PTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214

Query: 72  PPQPPPAPPVPARARSP 88
           PP PP   P P  + +P
Sbjct: 215 PPTPPATTPAPPSSSAP 231



 Score = 26.9 bits (58), Expect = 5.9
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 66  PRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSS 108
           P S+ APP+   APP P+      P  ++   + A   + P++
Sbjct: 179 PPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPAT 221


>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
          Length = 377

 Score = 43.1 bits (100), Expect = 8e-05
 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 11/106 (10%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAG--- 65
           PP PP   PA  P +++A P  T   P P  + P    +PL   +  + +  P       
Sbjct: 215 PPTPPATTPA--PPSSSAPPETTAAPPTPSATTP----APLSSSAPPETTAVPPTPSATT 268

Query: 66  --PRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSA 109
             P SA APP+   APP P+      P   +   + A   + P+S+
Sbjct: 269 LDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSS 314



 Score = 33.9 bits (76), Expect = 0.048
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 13  PLGPPARLPVTAAAAPAPTRGRPLP-YRSCPTNWVSPLQYRSSEDVSYRPQKAGPRSAIA 71
           P+  PA    TAA  P P+   P P   S P    +     S+   +     A P +  A
Sbjct: 156 PVNSPAPQDTTAAP-PTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214

Query: 72  PPQPPPAPPVPARARSP 88
           PP PP   P P  + +P
Sbjct: 215 PPTPPATTPAPPSSSAP 231



 Score = 26.9 bits (58), Expect = 5.9
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 66  PRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSS 108
           P S+ APP+   APP P+      P  ++   + A   + P++
Sbjct: 179 PPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPAT 221


>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
          Length = 377

 Score = 43.1 bits (100), Expect = 8e-05
 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 11/106 (10%)

Query: 9   PPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAG--- 65
           PP PP   PA  P +++A P  T   P P  + P    +PL   +  + +  P       
Sbjct: 215 PPTPPATTPA--PPSSSAPPETTAAPPTPSATTP----APLSSSAPPETTAVPPTPSATT 268

Query: 66  --PRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSA 109
             P SA APP+   APP P+      P   +   + A   + P+S+
Sbjct: 269 LDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSS 314



 Score = 33.9 bits (76), Expect = 0.048
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 13  PLGPPARLPVTAAAAPAPTRGRPLP-YRSCPTNWVSPLQYRSSEDVSYRPQKAGPRSAIA 71
           P+  PA    TAA  P P+   P P   S P    +     S+   +     A P +  A
Sbjct: 156 PVNSPAPQDTTAAP-PTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214

Query: 72  PPQPPPAPPVPARARSP 88
           PP PP   P P  + +P
Sbjct: 215 PPTPPATTPAPPSSSAP 231



 Score = 26.9 bits (58), Expect = 5.9
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 66  PRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSS 108
           P S+ APP+   APP P+      P  ++   + A   + P++
Sbjct: 179 PPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPAT 221


>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
          Length = 464

 Score = 43.1 bits (100), Expect = 8e-05
 Identities = 34/105 (32%), Positives = 39/105 (37%), Gaps = 16/105 (15%)

Query: 2   PAGDAEHPPAPPLGPPA---RLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVS 58
           P     HPPAP + PPA     P      PAP    P P    PT+ V P          
Sbjct: 282 PPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPA-------- 333

Query: 59  YRPQKAGPRSAIAPPQP---PPAPPVPARARSPQPGPASRCHSNA 100
             P    P   + PP P   PPAP V   A    P P++  H  A
Sbjct: 334 --PGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQA 376



 Score = 37.4 bits (85), Expect = 0.004
 Identities = 35/112 (31%), Positives = 43/112 (38%), Gaps = 13/112 (11%)

Query: 1   MPAGD--AEHPPAPPL-GPPARLPVTAAAAPAPTRGRPL----PYRSCPTNWVSPLQYRS 53
           +PAG    + PP P + G P R P+  +  P P  G PL    P    P+    P Q   
Sbjct: 223 LPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPP 282

Query: 54  SEDVSYRPQKA--GPRSAIAPPQPPPAPPVPARARSPQPG---PASRCHSNA 100
                + P      P S + PP P   PP P     P PG   P S  H  A
Sbjct: 283 PAPGVHPPAPVVHPPASGVHPPAPGVHPPAPG-VHPPAPGVHPPTSGVHPPA 333



 Score = 33.5 bits (75), Expect = 0.063
 Identities = 30/97 (30%), Positives = 33/97 (34%), Gaps = 15/97 (15%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
           P     HPPAP + PPA         PAP    P P    P   V P            P
Sbjct: 324 PPTSGVHPPAPGVHPPA----PGVHPPAPGVHPPAPGVHPPAPGVHP-----PPSAGVHP 374

Query: 62  QKAGPRSAI------APPQPPPAPPVPARARSPQPGP 92
           Q  G   A       AP   PPAP +  +A    P P
Sbjct: 375 QAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQP 411



 Score = 29.6 bits (65), Expect = 0.91
 Identities = 29/95 (30%), Positives = 37/95 (38%), Gaps = 19/95 (20%)

Query: 2   PAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRP 61
           PA  A HP AP + PPA  P     AP      P P          P  + S+  V  +P
Sbjct: 381 PAAPAVHPQAPGVHPPA--PGMHPQAPGV---HPQP----------PGVHPSAPGVHPQP 425

Query: 62  QKAGPRS-AIAPPQPPP---APPVPARARSPQPGP 92
               P +  + PP P P    PP+P+      P P
Sbjct: 426 PGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPP 460


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 43.1 bits (100), Expect = 8e-05
 Identities = 46/170 (27%), Positives = 58/170 (34%), Gaps = 40/170 (23%)

Query: 3   AGDAEHPPAP---------PLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRS 53
           AG A  PP P          LG PA    T  A+ A   G        P   + P  Y  
Sbjct: 400 AGGATRPPPPRSTATPKCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQGLLGPQAYGQ 459

Query: 54  ------SEDVSYRPQKAGPRSAIAPPQPPPAPPVPARAR------------------SPQ 89
                 ++D+S  P  +G      PPQPP  PP P  A                    P 
Sbjct: 460 GFGGGQAQDLSKAPSYSG-----GPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQGEPY 514

Query: 90  PGPASRCHSNALRSSIPSSARLASGGRRRARRWGHPQDAQKGGSGHRLPS 139
           PGPA+  HS  L ++ PS +         +   G    +  GG G   PS
Sbjct: 515 PGPAA--HSQGLPTASPSLSYSTGHSPALSGHGGGWGPSSLGGGGEASPS 562



 Score = 39.3 bits (90), Expect = 0.001
 Identities = 34/100 (34%), Positives = 40/100 (40%), Gaps = 19/100 (19%)

Query: 4    GDAEHPPAPPLGPPAR------LPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDV 57
            GD +    PP GPPA        P  A+ A   T G  L     P              V
Sbjct: 972  GDPKAGAGPPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPP---------ELPSTV 1022

Query: 58   SYRPQ---KAGPRSAIAPPQPPPAPPVPARARSPQPGPAS 94
            +  P    ++GP  A APP PPP PP PA A  P+ G  S
Sbjct: 1023 NAEPLGLIQSGPHQA-APPPPPPPPPPPAPASEPKGGLTS 1061



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 28/95 (29%), Positives = 34/95 (35%), Gaps = 19/95 (20%)

Query: 1    MPAGDAEHPPAPPL---GPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDV 57
            +P+ ++   P PPL    PP   P      P P    P P  + P    SP         
Sbjct: 1439 LPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALP----SP--------- 1485

Query: 58   SYRPQKAGPRSAIAPPQPPPAPPVPARARSPQPGP 92
               P    P  +  PP P P PP PA    P P P
Sbjct: 1486 ---PPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPP 1517



 Score = 32.7 bits (73), Expect = 0.11
 Identities = 30/102 (29%), Positives = 34/102 (33%), Gaps = 29/102 (28%)

Query: 5    DAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKA 64
            D   P  PPL P A +P      P P  G P    S  +N                    
Sbjct: 1415 DTSTPDGPPLAPAAAVP-----GPPPLPGLP----SANSNGT------------------ 1447

Query: 65   GPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIP 106
             P   +   +PPP PP PA    PQP P       AL S  P
Sbjct: 1448 -PEPPLLEEKPPPTPP-PAPTPQPQPPPPPPPPQPALPSPPP 1487



 Score = 30.0 bits (66), Expect = 0.70
 Identities = 43/154 (27%), Positives = 54/154 (35%), Gaps = 29/154 (18%)

Query: 9   PPAPPLGPPARLPV-------TAAAAPAPTRGRPLPYRSCPTNWVSPLQYRS---SEDVS 58
           PP PP  PP  LP        ++AAA A  +  P  Y         P   R+    + V 
Sbjct: 231 PPDPP-PPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVI 289

Query: 59  YRPQKAGPRSAIAPPQPPPA-------------PPVPARAR---SPQPGPASRCHSNALR 102
              Q+  P SA  PP PPPA             P +  RA    SP  G      +    
Sbjct: 290 KHYQR--PASAQPPPPPPPAHALQHYLSCGGSYPSMGHRANLACSPLGGGEPSPGAGEPS 347

Query: 103 SSIPSSARLASGGRRRARRWGHPQDAQKGGSGHR 136
            + PS A   + GR           A  GG G+R
Sbjct: 348 KAGPSGATAGASGRATGPEAAGGGGAGGGGGGYR 381



 Score = 30.0 bits (66), Expect = 0.70
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 17/82 (20%)

Query: 1   MPAGDAEHPPAPPLGPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYR 60
           + AG  + P   P  PP  LP   + AP+P+        S     V  L+  + +     
Sbjct: 783 LEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSP-------SASKVGVHLLEPATRDGAPQP 835

Query: 61  PQKAGPRSAIAPPQPPPAPPVP 82
           P          PP PPP PP+P
Sbjct: 836 P----------PPPPPPPPPMP 847



 Score = 28.9 bits (63), Expect = 1.6
 Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 15/78 (19%)

Query: 63   KAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRRRARRW 122
            +AG    ++PP+  P P VPAR   PQP PA+    +      P S     GG   A   
Sbjct: 1300 QAGLTPPLSPPKSVP-PSVPARGLQPQP-PATPAVPHP-----PPSGAFGLGGALEA--- 1349

Query: 123  GHPQDAQKGGSGHRLPSP 140
                 A+  G G   PSP
Sbjct: 1350 -----AESEGLGLGCPSP 1362



 Score = 28.9 bits (63), Expect = 1.6
 Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 16/110 (14%)

Query: 9    PPAPPL-GPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRSSEDVSYRPQKAGPR 67
            PP P      A+ PV+A  + AP    P P          P      +  S +P +  P 
Sbjct: 1670 PPVPVRRSGQAKNPVSAGGSSAPPPKAPAP---------PPKPETPEKTTSEKPPEQTPE 1720

Query: 68   SAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLASGGRR 117
            +A+      P PP P +    +P    +      R   P     A+ GR+
Sbjct: 1721 TAM------PEPPAPEKPSLLRPVEKEKEKEKVTRGERPLRGERATSGRQ 1764



 Score = 28.1 bits (61), Expect = 2.7
 Identities = 43/159 (27%), Positives = 56/159 (35%), Gaps = 28/159 (17%)

Query: 6   AEHPPAPPLGPPARLPVTAAA-------APAPTRGRPLPYRSCPTNWVSPLQYRSSEDVS 58
           A  PP PP  PP  +P+   A        PA    R  P  S            + E + 
Sbjct: 832 APQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPLP 891

Query: 59  YRPQKAGPRSAIAPPQPPPAPPVPA-RARSPQPGPASR-------CHSNAL-----RSSI 105
             P   G    + PP      P  A R+ SPQ   A R       C  ++L     RS  
Sbjct: 892 PAPGDTG----VGPPNSEGKDPAGAYRSPSPQGTKAPRFVPLTSICFPDSLLQDEERSFF 947

Query: 106 PSSARLASGGRR-RARRWGHPQDA--QKGGSGHRLPSPP 141
           P+   +  GG      + G P+D    K G+G   P PP
Sbjct: 948 PTMEEMFGGGAADDYGKAGPPEDEGDPKAGAGPP-PGPP 985



 Score = 27.3 bits (59), Expect = 4.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 2    PAGDAEHPPAPPLGPPARLPVTAAAAPAP 30
            PA  +  PP PP   P   P    AAP+P
Sbjct: 1507 PAMPSPPPPPPPAAAPLAAPPEEPAAPSP 1535



 Score = 26.9 bits (58), Expect = 5.9
 Identities = 12/31 (38%), Positives = 13/31 (41%)

Query: 61   PQKAGPRSAIAPPQPPPAPPVPARARSPQPG 91
            P  AGP+    P  PP AP        P PG
Sbjct: 1408 PPLAGPKDTSTPDGPPLAPAAAVPGPPPLPG 1438


>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
          Length = 502

 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 44/155 (28%), Positives = 53/155 (34%), Gaps = 23/155 (14%)

Query: 2   PAGDAEHPPAPPL--------GPPARLPVTAAAAPAPTRGRPLPYRSCPTNWVSPLQYRS 53
           P+      P PP+        GP   +P+  A  P   RG P P R  P     P   RS
Sbjct: 319 PSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRS 378

Query: 54  SEDVSYRPQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSSIPSSARLAS 113
                  P   GP     PP PPP    P+    P P P        L  ++  +  LA 
Sbjct: 379 GPLPPPPPGAGGPPMPPPPPPPPPP---PSSGNGPAPPP--------LPPALVPAGGLAP 427

Query: 114 GGRRRAR----RWGHPQDAQKGGSGHRLPSPPTQS 144
           GG R A     R G   +   G        PP QS
Sbjct: 428 GGGRGALLDQIRQGIQLNKTPGAPESSALQPPPQS 462


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.130    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,557,183
Number of Sequences: 37866
Number of extensions: 661880
Number of successful extensions: 17010
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 1347
Number of HSP's that attempted gapping in prelim test: 6789
Number of HSP's gapped (non-prelim): 7289
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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