Guide to the Human Genome
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Search of human proteins with 239751818

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751818 PREDICTED: hypothetical protein XP_002348008 [Homo
sapiens]
         (195 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751818 PREDICTED: hypothetical protein XP_002348008 [Homo ...   399   e-111
gi|239746309 PREDICTED: hypothetical protein XP_002343728 [Homo ...   399   e-111
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi...    45   4e-05
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          42   3e-04
gi|148536864 SWI/SNF-related matrix-associated actin-dependent r...    40   0.001
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    40   0.001
gi|239747595 PREDICTED: hypothetical protein XP_002347777 [Homo ...    40   0.002
gi|239741460 PREDICTED: hypothetical protein XP_002342225 [Homo ...    40   0.002
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]                  39   0.002
gi|126352608 elastin isoform e precursor [Homo sapiens]                38   0.005
gi|126352700 elastin isoform b precursor [Homo sapiens]                38   0.005
gi|126352440 elastin isoform a precursor [Homo sapiens]                38   0.005
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho...    38   0.005
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho...    38   0.005
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho...    38   0.005
gi|20336298 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 2 ...    37   0.008
gi|17505907 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1 ...    37   0.008
gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a...    37   0.014
gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b...    37   0.014
gi|126352446 elastin isoform d precursor [Homo sapiens]                37   0.014
gi|126352322 elastin isoform c precursor [Homo sapiens]                37   0.014
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]                36   0.018
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]                36   0.018
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]       36   0.024
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]           35   0.031
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]          35   0.031
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]          35   0.031
gi|22538470 eomesodermin [Homo sapiens]                                35   0.040
gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo ...    35   0.040
gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens]       35   0.040

>gi|239751818 PREDICTED: hypothetical protein XP_002348008 [Homo
           sapiens]
          Length = 195

 Score =  399 bits (1024), Expect = e-111
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MAFISSMSPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIP 60
           MAFISSMSPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIP
Sbjct: 1   MAFISSMSPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIP 60

Query: 61  HKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSP 120
           HKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSP
Sbjct: 61  HKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSP 120

Query: 121 GAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAPTMPRA 180
           GAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAPTMPRA
Sbjct: 121 GAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAPTMPRA 180

Query: 181 LKGPRAPPGEGVEGA 195
           LKGPRAPPGEGVEGA
Sbjct: 181 LKGPRAPPGEGVEGA 195


>gi|239746309 PREDICTED: hypothetical protein XP_002343728 [Homo
           sapiens]
          Length = 195

 Score =  399 bits (1024), Expect = e-111
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MAFISSMSPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIP 60
           MAFISSMSPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIP
Sbjct: 1   MAFISSMSPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIP 60

Query: 61  HKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSP 120
           HKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSP
Sbjct: 61  HKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSP 120

Query: 121 GAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAPTMPRA 180
           GAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAPTMPRA
Sbjct: 121 GAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAPTMPRA 180

Query: 181 LKGPRAPPGEGVEGA 195
           LKGPRAPPGEGVEGA
Sbjct: 181 LKGPRAPPGEGVEGA 195


>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
           sapiens]
          Length = 547

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 48/148 (32%), Positives = 57/148 (38%), Gaps = 23/148 (15%)

Query: 64  PGPVLPGEGVQGVV-LPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSPGA 122
           PGPV PG G  G   L      + GPP       G  L  G+S     E G  RG  P  
Sbjct: 257 PGPV-PGAGGCGEDRLGSQPRPENGPPGSHRTASGRGLRRGDS-----EGGVNRGIGPSR 310

Query: 123 ASLRRSDERFLQQ--KGDAASAPQRAPLAGGGYSVTLTT-VLLFVTF------------- 166
            SL   D++ L    +G AA  P R P   GG S+TL      + TF             
Sbjct: 311 VSLLAPDKKRLNNAPRGSAAPGPPRGPRLQGGGSLTLQPDYAKYATFKAAALKAAVPRAR 370

Query: 167 RSKIPLPAPTMPRALKGPRAPPGEGVEG 194
           RS   LP P+ PR    P   P +   G
Sbjct: 371 RSANRLPRPSGPRPRPAPARSPSQSPAG 398


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 57/188 (30%), Positives = 64/188 (34%), Gaps = 44/188 (23%)

Query: 9    PPPPLRPLSALGAVGPPEASSCWRNLKGAGALG-AGLLAFQPNDTAGSPGLIPHKSPGPV 67
            PP P  PL   G  GPP        L G    G  G    +     G  G+ P +   P 
Sbjct: 1375 PPGPRGPLGDPGPRGPP-------GLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPG 1427

Query: 68   LPGE-GVQGVVLPLLRALQLGPPKGANLGVGGDLEEGE-----SPASWGECGPGRGGSPG 121
            LPG  G QG V         GPP     G  GD E+G       P S GE GP   G PG
Sbjct: 1428 LPGSPGPQGPV---------GPP--GKKGEKGDSEDGAPGLPGQPGSPGEQGP--RGPPG 1474

Query: 122  AASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAPTMPRAL 181
            A    + D  F    G+A    +R P    G                   LP        
Sbjct: 1475 AIG-PKGDRGFPGPLGEAGEKGERGPPGPAG----------------SRGLPGVAGRPGA 1517

Query: 182  KGPRAPPG 189
            KGP  PPG
Sbjct: 1518 KGPEGPPG 1525



 Score = 32.0 bits (71), Expect = 0.34
 Identities = 44/125 (35%), Positives = 53/125 (42%), Gaps = 18/125 (14%)

Query: 10   PPPLRPLSALGAVGPPEASSCWRNLKG-AGALGAGLLAFQPNDTAGSPGLIPHKS-PGPV 67
            P PL P    G+VGPP AS     LKG  G  G GL    P    G PG+      PG  
Sbjct: 2436 PGPLGPPGPPGSVGPPGAS----GLKGDKGDPGVGLPG--PRGERGEPGIRGEDGRPGQ- 2488

Query: 68   LPGEGVQGVVLPLLRALQLGPPKG--ANLGVGGDLEEGESPASWGECGP-GRGGSPGAAS 124
               EG +G+  P     + G  KG   + G+ GD  +G+S    G  GP G  G  G   
Sbjct: 2489 ---EGPRGLTGPPGSRGERG-EKGDVGSAGLKGD--KGDSAVILGPPGPRGAKGDMGERG 2542

Query: 125  LRRSD 129
             R  D
Sbjct: 2543 PRGLD 2547



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 57/193 (29%), Positives = 70/193 (36%), Gaps = 69/193 (35%)

Query: 19   LGAVGPPEASSCWRNLKGA-GALGAGLLAFQPNDTA-----GSPGLIPHKSP--GPVLPG 70
            +G +GP       R LKG  G  GA  L  +  D       G PGL  HK     P +PG
Sbjct: 2616 VGFMGP-------RGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPG 2668

Query: 71   E----GVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECG-PGRGGSPGAASL 125
            +    G +G++ P       G P     G  GD  +GE     GE G PG GG PG +  
Sbjct: 2669 QSGAPGKEGLIGPKGDRGFDGQP-----GPKGD--QGEK----GERGTPGIGGFPGPSG- 2716

Query: 126  RRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAPTMPRAL---K 182
                        D ++ P   P + G                       P  P  L   K
Sbjct: 2717 -----------NDGSAGPPGPPGSVG-----------------------PRGPEGLQGQK 2742

Query: 183  GPRAPPGEGVEGA 195
            G R PPGE V GA
Sbjct: 2743 GERGPPGERVVGA 2755



 Score = 28.9 bits (63), Expect = 2.9
 Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 21/99 (21%)

Query: 49   PNDTAGSPGLIPHKSPGPVLPGEGVQGVVLPLLRALQLGPP----KGANLGVGGDLEEGE 104
            P    G+PG++  + P P LPG               +GPP     G   G G   + GE
Sbjct: 1873 PKGERGAPGILGPQGP-PGLPGP--------------VGPPGQGFPGVPGGTGPKGDRGE 1917

Query: 105  SPASWGECG-PGRGGSPGAASLRRSDERFLQQKGDAASA 142
            +  S GE G PG  G  G      + +R L+  G  ASA
Sbjct: 1918 T-GSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASA 1955



 Score = 28.1 bits (61), Expect = 4.9
 Identities = 37/132 (28%), Positives = 48/132 (36%), Gaps = 26/132 (19%)

Query: 60   PHKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECG-PGRGG 118
            P   P PV   +G +G    +    Q+GPP        GD      P   G  G PG  G
Sbjct: 1242 PRPEPCPVYCPKGQKGEPGEMGLRGQVGPP--------GD------PGLPGRTGAPGPQG 1287

Query: 119  SPGAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAPTMP 178
             PG+A+ +   ER          +P RA   G   +  L         +    LP P   
Sbjct: 1288 PPGSATAK--GERGFPGADGRPGSPGRAGNPGTPGAPGL---------KGSPGLPGPRGD 1336

Query: 179  RALKGPRAPPGE 190
               +GPR P GE
Sbjct: 1337 PGERGPRGPKGE 1348



 Score = 27.7 bits (60), Expect = 6.5
 Identities = 42/149 (28%), Positives = 52/149 (34%), Gaps = 42/149 (28%)

Query: 49   PNDTAGSPGLIPHKSPG-PVLPG-EGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESP 106
            PN  AG  G      PG   LPG  G QG+  P       GPP     G+ G   E   P
Sbjct: 1795 PNGAAGKAG-----DPGRDGLPGLRGEQGLPGPS------GPP-----GLPGKPGEDGKP 1838

Query: 107  ASWGECG-PGRGGSPGAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVT 165
               G+ G PG  G  G             +KGD+ ++ +       G             
Sbjct: 1839 GLNGKNGEPGDPGEDGRKG----------EKGDSGASGREGRDGPKGE------------ 1876

Query: 166  FRSKIPLPAPTMPRALKGPRAPPGEGVEG 194
             R    +  P  P  L GP  PPG+G  G
Sbjct: 1877 -RGAPGILGPQGPPGLPGPVGPPGQGFPG 1904


>gi|148536864 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin d2 isoform 1 [Homo sapiens]
          Length = 531

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 37/111 (33%), Positives = 43/111 (38%), Gaps = 24/111 (21%)

Query: 9   PPPPLRP-----LSALGAVGPPEASSCWRN--LKGAGALGA----GLLAFQPNDTAGSPG 57
           P PPL P      +ALGA  PP          L+G G  G     G  AF+P   AG   
Sbjct: 10  PLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFRPMGPAGPAA 69

Query: 58  LI--PHKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESP 106
               P  SPG  +P  G           LQ+GPP G+  G    L  G  P
Sbjct: 70  QYQRPGMSPGNRMPMAG-----------LQVGPPAGSPFGAAAPLRPGMPP 109


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 48/195 (24%), Positives = 65/195 (33%), Gaps = 48/195 (24%)

Query: 8   SPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIPHKSPGPV 67
           +P PP  P  A  A  PP                   LA  P   AG P      +  P 
Sbjct: 254 APSPPAAPAPAAPAAAPPPPPPA-----------PATLARPPGHPAGPP------TAAPA 296

Query: 68  LPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSPGAASL-- 125
           +P                  PP  A  G         +PA+ G  G      PGAA+   
Sbjct: 297 VP------------------PPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAP 338

Query: 126 -----RRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAPTMPRA 180
                  S +R +Q     A+ P    LA  G + T  ++++  T +  +P PA   P A
Sbjct: 339 APGVKAESPKRVVQ-----AAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPA 393

Query: 181 LKGPRAPPGEGVEGA 195
              P   P +G  GA
Sbjct: 394 PGTPTGLP-KGAAGA 407



 Score = 35.0 bits (79), Expect = 0.040
 Identities = 56/192 (29%), Positives = 63/192 (32%), Gaps = 45/192 (23%)

Query: 9   PPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIPHKSP-GPV 67
           PP P RPL   G   PP A      L+      AG  A  P   A + G  P  +P GP 
Sbjct: 107 PPSPRRPLVPAGPA-PPAAK-----LRPPPEGSAGSCAPVPAAAAVAAG--PEPAPAGPA 158

Query: 68  LPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSPGAASLRR 127
            P         P   A + GP  G   G       G  P      GPG+   PGAA    
Sbjct: 159 KPAG-------PAALAARAGPGPGPGPG------PGPGP------GPGKPAGPGAAQTLN 199

Query: 128 SDERFLQ------------QKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPLPAP 175
                L               G AA  P   P A G    T+     FV   +  P PA 
Sbjct: 200 GSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPG----TVIQTPPFVGAAAP-PAPAA 254

Query: 176 TMPRALKGPRAP 187
             P A   P AP
Sbjct: 255 PSPPAAPAPAAP 266


>gi|239747595 PREDICTED: hypothetical protein XP_002347777 [Homo
           sapiens]
          Length = 98

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 54  GSPGLIPHKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECG 113
           G PGL      G VL G    GV   L    +LG   G  L        G +P  WG+CG
Sbjct: 9   GDPGLSGESQRGRVLEGSLAAGVRCGLKSEQELGAALGDRLW-------GTAPREWGKCG 61

Query: 114 PGRGGSP 120
           PG  G P
Sbjct: 62  PGPLGPP 68


>gi|239741460 PREDICTED: hypothetical protein XP_002342225 [Homo
           sapiens]
          Length = 98

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 54  GSPGLIPHKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECG 113
           G PGL      G VL G    GV   L    +LG   G  L        G +P  WG+CG
Sbjct: 9   GDPGLSGESQRGRVLEGSLAAGVRCGLKSEQELGAALGDRLW-------GTAPREWGKCG 61

Query: 114 PGRGGSP 120
           PG  G P
Sbjct: 62  PGPLGPP 68


>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
          Length = 1499

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 30/77 (38%), Positives = 35/77 (45%), Gaps = 12/77 (15%)

Query: 7   MSPPPPLRPLSALGAV---GPPEASS--CWRNLKGAGALGAGLLAFQPNDTAGS------ 55
           + PPPP  P SA  A+   GPPE SS     N  GA + G G     PN    +      
Sbjct: 306 LPPPPPPAPGSAPPALPPEGPPEDSSQDLAPNSVGAASTGGGTGGTHPNTPTATTANNPL 365

Query: 56  -PGLIPHKSPGPVLPGE 71
            PG  P  +PGP L GE
Sbjct: 366 PPGGDPSSAPGPALLGE 382



 Score = 32.0 bits (71), Expect = 0.34
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 17/102 (16%)

Query: 5    SSMSPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIPHKSP 64
            S M P PP R     GA+ P           G G  G GL    P+  A  P  +P++ P
Sbjct: 1223 SQMMPFPP-RLQQPHGAMAPT----------GGGGGGPGLQQHYPSGMALPPEDLPNQPP 1271

Query: 65   GPVLPGEGVQGVVLPLLRALQLGP--PKGANLGVGGDLEEGE 104
            GP+ P + + G  +    A ++G   P G   GV   L + E
Sbjct: 1272 GPMPPQQHLMGKAM----AGRMGDAYPPGVLPGVASVLNDPE 1309


>gi|126352608 elastin isoform e precursor [Homo sapiens]
          Length = 705

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 49/154 (31%), Positives = 56/154 (36%), Gaps = 41/154 (26%)

Query: 18  ALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAG-SPGLIPHKS-----PGPVLPGE 71
           A  A    +A +    + G G LG    A  P   AG  PG +P        PG VLPG 
Sbjct: 99  AAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGA 158

Query: 72  GVQGV-VLPLLRALQLGPPKGANL-----GVGGDLEEGESPASWGECGPGRGGSPGAASL 125
              GV VLP       G P GA +     GVGG        A  G  G G  G P     
Sbjct: 159 RFPGVGVLP-------GVPTGAGVKPKAPGVGG--------AFAGIPGVGPFGGP----- 198

Query: 126 RRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTT 159
                    Q G     P +AP   GGY +  TT
Sbjct: 199 ---------QPGVPLGYPIKAPKLPGGYGLPYTT 223



 Score = 36.6 bits (83), Expect = 0.014
 Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 23/137 (16%)

Query: 10  PPPLRPLSALGAVGPPEASSCWRNLKGAGALGA--GLLAFQPNDTAGSPGLIPHKSPG-- 65
           P  +  +  +  VG P A++       A   GA  GL+   P    G  G+     PG  
Sbjct: 286 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVG 345

Query: 66  ------PVLPGEGVQGVVLP-----------LLRALQLGPPKGANLGVGGDLEEGESPAS 108
                 PV+PG G+ G  +P             +A + G   G  +GVGG    G     
Sbjct: 346 VPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPG--VGVGGIPTYGVGAGG 403

Query: 109 WGECGPGRGGSPGAASL 125
           +   G G GG PG A +
Sbjct: 404 FPGFGVGVGGIPGVAGV 420



 Score = 32.3 bits (72), Expect = 0.26
 Identities = 39/135 (28%), Positives = 50/135 (37%), Gaps = 23/135 (17%)

Query: 38  GALGAGLLAFQPNDTAGSPGLIPHKSPGPVL-PGEGV----QGVVLPLLRALQLGPP--K 90
           G L   L    P+   G PG IP   PG V  PG G+     G + P  + L+  P    
Sbjct: 12  GVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLA 71

Query: 91  GANLGVG---------------GDLEEGESPASWGECGPGRGGSPGAASLRRSDERFLQQ 135
           GA LG G               G + +  +     + G G GG PG   L  S    + Q
Sbjct: 72  GAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQ 131

Query: 136 KGDAASAPQRAPLAG 150
            G A   P + P  G
Sbjct: 132 PG-AGVKPGKVPGVG 145


>gi|126352700 elastin isoform b precursor [Homo sapiens]
          Length = 677

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 49/154 (31%), Positives = 56/154 (36%), Gaps = 41/154 (26%)

Query: 18  ALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAG-SPGLIPHKS-----PGPVLPGE 71
           A  A    +A +    + G G LG    A  P   AG  PG +P        PG VLPG 
Sbjct: 89  AAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGA 148

Query: 72  GVQGV-VLPLLRALQLGPPKGANL-----GVGGDLEEGESPASWGECGPGRGGSPGAASL 125
              GV VLP       G P GA +     GVGG        A  G  G G  G P     
Sbjct: 149 RFPGVGVLP-------GVPTGAGVKPKAPGVGG--------AFAGIPGVGPFGGP----- 188

Query: 126 RRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTT 159
                    Q G     P +AP   GGY +  TT
Sbjct: 189 ---------QPGVPLGYPIKAPKLPGGYGLPYTT 213



 Score = 36.6 bits (83), Expect = 0.014
 Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 23/137 (16%)

Query: 10  PPPLRPLSALGAVGPPEASSCWRNLKGAGALGA--GLLAFQPNDTAGSPGLIPHKSPG-- 65
           P  +  +  +  VG P A++       A   GA  GL+   P    G  G+     PG  
Sbjct: 276 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVG 335

Query: 66  ------PVLPGEGVQGVVLP-----------LLRALQLGPPKGANLGVGGDLEEGESPAS 108
                 PV+PG G+ G  +P             +A + G   G  +GVGG    G     
Sbjct: 336 VPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPG--VGVGGIPTYGVGAGG 393

Query: 109 WGECGPGRGGSPGAASL 125
           +   G G GG PG A +
Sbjct: 394 FPGFGVGVGGIPGVAGV 410



 Score = 34.7 bits (78), Expect = 0.053
 Identities = 37/125 (29%), Positives = 45/125 (36%), Gaps = 13/125 (10%)

Query: 38  GALGAGLLAFQPNDTAGSPGLIPHKSPGPVL-PGEGVQGVVLPLLRALQLGPPKGANLG- 95
           G L   L    P+   G PG IP   PG V  P  G  G  L  +     G   GA LG 
Sbjct: 12  GVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGA 71

Query: 96  ----------VGGDLEEGESPASWGECGPGRGGSPGAASLRRSDERFLQQKGDAASAPQR 145
                     V G + +  +     + G G GG PG   L  S    + Q G A   P +
Sbjct: 72  FPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPG-AGVKPGK 130

Query: 146 APLAG 150
            P  G
Sbjct: 131 VPGVG 135


>gi|126352440 elastin isoform a precursor [Homo sapiens]
          Length = 724

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 49/154 (31%), Positives = 56/154 (36%), Gaps = 41/154 (26%)

Query: 18  ALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAG-SPGLIPHKS-----PGPVLPGE 71
           A  A    +A +    + G G LG    A  P   AG  PG +P        PG VLPG 
Sbjct: 99  AAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGA 158

Query: 72  GVQGV-VLPLLRALQLGPPKGANL-----GVGGDLEEGESPASWGECGPGRGGSPGAASL 125
              GV VLP       G P GA +     GVGG        A  G  G G  G P     
Sbjct: 159 RFPGVGVLP-------GVPTGAGVKPKAPGVGG--------AFAGIPGVGPFGGP----- 198

Query: 126 RRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTT 159
                    Q G     P +AP   GGY +  TT
Sbjct: 199 ---------QPGVPLGYPIKAPKLPGGYGLPYTT 223



 Score = 36.6 bits (83), Expect = 0.014
 Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 23/137 (16%)

Query: 10  PPPLRPLSALGAVGPPEASSCWRNLKGAGALGA--GLLAFQPNDTAGSPGLIPHKSPG-- 65
           P  +  +  +  VG P A++       A   GA  GL+   P    G  G+     PG  
Sbjct: 286 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVG 345

Query: 66  ------PVLPGEGVQGVVLP-----------LLRALQLGPPKGANLGVGGDLEEGESPAS 108
                 PV+PG G+ G  +P             +A + G   G  +GVGG    G     
Sbjct: 346 VPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPG--VGVGGIPTYGVGAGG 403

Query: 109 WGECGPGRGGSPGAASL 125
           +   G G GG PG A +
Sbjct: 404 FPGFGVGVGGIPGVAGV 420



 Score = 32.3 bits (72), Expect = 0.26
 Identities = 39/135 (28%), Positives = 50/135 (37%), Gaps = 23/135 (17%)

Query: 38  GALGAGLLAFQPNDTAGSPGLIPHKSPGPVL-PGEGV----QGVVLPLLRALQLGPP--K 90
           G L   L    P+   G PG IP   PG V  PG G+     G + P  + L+  P    
Sbjct: 12  GVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLA 71

Query: 91  GANLGVG---------------GDLEEGESPASWGECGPGRGGSPGAASLRRSDERFLQQ 135
           GA LG G               G + +  +     + G G GG PG   L  S    + Q
Sbjct: 72  GAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQ 131

Query: 136 KGDAASAPQRAPLAG 150
            G A   P + P  G
Sbjct: 132 PG-AGVKPGKVPGVG 145


>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
            sapiens]
          Length = 1751

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 55/195 (28%), Positives = 68/195 (34%), Gaps = 33/195 (16%)

Query: 9    PPPPLRPLSALGAVGPP--EASSCWRNLKGA-GALGAGLLAFQPNDTAGSPGLIPHKSPG 65
            PP P       G +G P          LKG  G  G   L F      G PG  P   PG
Sbjct: 1207 PPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPG--PPGPPG 1264

Query: 66   PVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSPGA--- 122
            P  PG  V    +    + + GPP     G+ G+        + GE GP   G PG    
Sbjct: 1265 P--PGTPVYDSNV-FAESSRPGPP-----GLPGNQGPPGPKGAKGEVGPP--GPPGQFPF 1314

Query: 123  --ASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIP-LPAPTMPR 179
                L    +     +GDA    +R    GGG+            F S +P  P P  PR
Sbjct: 1315 DFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGF------------FGSSLPGPPGPPGPR 1362

Query: 180  ALKGPRAPPGEGVEG 194
               G   P GE + G
Sbjct: 1363 GYPGIPGPKGESIRG 1377


>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
           sapiens]
          Length = 1336

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 55/195 (28%), Positives = 68/195 (34%), Gaps = 33/195 (16%)

Query: 9   PPPPLRPLSALGAVGPP--EASSCWRNLKGA-GALGAGLLAFQPNDTAGSPGLIPHKSPG 65
           PP P       G +G P          LKG  G  G   L F      G PG  P   PG
Sbjct: 792 PPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPG--PPGPPG 849

Query: 66  PVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSPGA--- 122
           P  PG  V    +    + + GPP     G+ G+        + GE GP   G PG    
Sbjct: 850 P--PGTPVYDSNV-FAESSRPGPP-----GLPGNQGPPGPKGAKGEVGPP--GPPGQFPF 899

Query: 123 --ASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIP-LPAPTMPR 179
               L    +     +GDA    +R    GGG+            F S +P  P P  PR
Sbjct: 900 DFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGF------------FGSSLPGPPGPPGPR 947

Query: 180 ALKGPRAPPGEGVEG 194
              G   P GE + G
Sbjct: 948 GYPGIPGPKGESIRG 962


>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
            sapiens]
          Length = 1516

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 55/195 (28%), Positives = 68/195 (34%), Gaps = 33/195 (16%)

Query: 9    PPPPLRPLSALGAVGPP--EASSCWRNLKGA-GALGAGLLAFQPNDTAGSPGLIPHKSPG 65
            PP P       G +G P          LKG  G  G   L F      G PG  P   PG
Sbjct: 972  PPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPG--PPGPPG 1029

Query: 66   PVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSPGA--- 122
            P  PG  V    +    + + GPP     G+ G+        + GE GP   G PG    
Sbjct: 1030 P--PGTPVYDSNV-FAESSRPGPP-----GLPGNQGPPGPKGAKGEVGPP--GPPGQFPF 1079

Query: 123  --ASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIP-LPAPTMPR 179
                L    +     +GDA    +R    GGG+            F S +P  P P  PR
Sbjct: 1080 DFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGF------------FGSSLPGPPGPPGPR 1127

Query: 180  ALKGPRAPPGEGVEG 194
               G   P GE + G
Sbjct: 1128 GYPGIPGPKGESIRG 1142


>gi|20336298 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 2
           [Homo sapiens]
          Length = 585

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 12/59 (20%)

Query: 69  PGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSPGAASLRR 127
           PG G +G ++P        PP  A LG         SP SW   GPGRGG  G++ + R
Sbjct: 37  PGGGTRGSLVPTRPV----PPSPAPLGT--------SPYSWSRSGPGRGGGAGSSRVPR 83


>gi|17505907 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1
           [Homo sapiens]
          Length = 851

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 12/59 (20%)

Query: 69  PGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSPGAASLRR 127
           PG G +G ++P        PP  A LG         SP SW   GPGRGG  G++ + R
Sbjct: 37  PGGGTRGSLVPTRPV----PPSPAPLGT--------SPYSWSRSGPGRGGGAGSSRVPR 83


>gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a
           [Homo sapiens]
          Length = 1130

 Score = 36.6 bits (83), Expect = 0.014
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 6/88 (6%)

Query: 4   ISSMSPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIPHKS 63
           +S + P PP  P ++ G  G   + S  +   G   LGA   A    D   S    P + 
Sbjct: 892 LSRLKPAPPPPPAASAGKAGGKPSQSPSQEAAGEAVLGAKTKATSLVDAVNSDAAKPSQ- 950

Query: 64  PGPVLPGEGVQGVVLPLLRALQLGPPKG 91
                PGEG++  VLP     Q   P G
Sbjct: 951 -----PGEGLKKPVLPATPKPQSAKPSG 973


>gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b
           [Homo sapiens]
          Length = 1149

 Score = 36.6 bits (83), Expect = 0.014
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 6/88 (6%)

Query: 4   ISSMSPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIPHKS 63
           +S + P PP  P ++ G  G   + S  +   G   LGA   A    D   S    P + 
Sbjct: 911 LSRLKPAPPPPPAASAGKAGGKPSQSPSQEAAGEAVLGAKTKATSLVDAVNSDAAKPSQ- 969

Query: 64  PGPVLPGEGVQGVVLPLLRALQLGPPKG 91
                PGEG++  VLP     Q   P G
Sbjct: 970 -----PGEGLKKPVLPATPKPQSAKPSG 992


>gi|126352446 elastin isoform d precursor [Homo sapiens]
          Length = 711

 Score = 36.6 bits (83), Expect = 0.014
 Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 23/137 (16%)

Query: 10  PPPLRPLSALGAVGPPEASSCWRNLKGAGALGA--GLLAFQPNDTAGSPGLIPHKSPG-- 65
           P  +  +  +  VG P A++       A   GA  GL+   P    G  G+     PG  
Sbjct: 291 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVG 350

Query: 66  ------PVLPGEGVQGVVLP-----------LLRALQLGPPKGANLGVGGDLEEGESPAS 108
                 PV+PG G+ G  +P             +A + G   G  +GVGG    G     
Sbjct: 351 VPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPG--VGVGGIPTYGVGAGG 408

Query: 109 WGECGPGRGGSPGAASL 125
           +   G G GG PG A +
Sbjct: 409 FPGFGVGVGGIPGVAGV 425



 Score = 35.0 bits (79), Expect = 0.040
 Identities = 45/158 (28%), Positives = 53/158 (33%), Gaps = 17/158 (10%)

Query: 38  GALGAGLLAFQPNDTAGSPGLIPHKSPGPVL-PGEGVQGVVLPLLRALQLGPPKGANLGV 96
           G L   L    P+   G PG IP   PG V  PG G             LG   G  LG 
Sbjct: 12  GVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAG-------------LGALGGGALGP 58

Query: 97  GGDLEEGESPASWGECGPGRGGSPGAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVT 156
           GG   +   P   G  G G G   GA          +      A+A  +A  AG G    
Sbjct: 59  GG---KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGV 115

Query: 157 LTTVLLFVTFRSKIPLPAPTMPRALKGPRAPPGEGVEG 194
                L V+    +P      P A   P   PG G+ G
Sbjct: 116 PGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPG 153



 Score = 35.0 bits (79), Expect = 0.040
 Identities = 43/145 (29%), Positives = 51/145 (35%), Gaps = 18/145 (12%)

Query: 18  ALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPG--LIPHKSPGPVLPGEGVQG 75
           A  A    +A +    + G G LG       P      PG  + P K PG  LPG    G
Sbjct: 99  AAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGV-YPG 157

Query: 76  VVLPLLRALQLGPPKGANLGVGGDLEE-GESPASWGECGPGRGGSPGAASLRRSDERFLQ 134
            VLP  R   +G   G   G G   +  G   A  G  G G  G P              
Sbjct: 158 GVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGP-------------- 203

Query: 135 QKGDAASAPQRAPLAGGGYSVTLTT 159
           Q G     P +AP   GGY +  TT
Sbjct: 204 QPGVPLGYPIKAPKLPGGYGLPYTT 228


>gi|126352322 elastin isoform c precursor [Homo sapiens]
          Length = 692

 Score = 36.6 bits (83), Expect = 0.014
 Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 23/137 (16%)

Query: 10  PPPLRPLSALGAVGPPEASSCWRNLKGAGALGA--GLLAFQPNDTAGSPGLIPHKSPG-- 65
           P  +  +  +  VG P A++       A   GA  GL+   P    G  G+     PG  
Sbjct: 291 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVG 350

Query: 66  ------PVLPGEGVQGVVLP-----------LLRALQLGPPKGANLGVGGDLEEGESPAS 108
                 PV+PG G+ G  +P             +A + G   G  +GVGG    G     
Sbjct: 351 VPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPG--VGVGGIPTYGVGAGG 408

Query: 109 WGECGPGRGGSPGAASL 125
           +   G G GG PG A +
Sbjct: 409 FPGFGVGVGGIPGVAGV 425



 Score = 35.0 bits (79), Expect = 0.040
 Identities = 45/158 (28%), Positives = 53/158 (33%), Gaps = 17/158 (10%)

Query: 38  GALGAGLLAFQPNDTAGSPGLIPHKSPGPVL-PGEGVQGVVLPLLRALQLGPPKGANLGV 96
           G L   L    P+   G PG IP   PG V  PG G             LG   G  LG 
Sbjct: 12  GVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPGAG-------------LGALGGGALGP 58

Query: 97  GGDLEEGESPASWGECGPGRGGSPGAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVT 156
           GG   +   P   G  G G G   GA          +      A+A  +A  AG G    
Sbjct: 59  GG---KPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGV 115

Query: 157 LTTVLLFVTFRSKIPLPAPTMPRALKGPRAPPGEGVEG 194
                L V+    +P      P A   P   PG G+ G
Sbjct: 116 PGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPG 153



 Score = 35.0 bits (79), Expect = 0.040
 Identities = 43/145 (29%), Positives = 51/145 (35%), Gaps = 18/145 (12%)

Query: 18  ALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPG--LIPHKSPGPVLPGEGVQG 75
           A  A    +A +    + G G LG       P      PG  + P K PG  LPG    G
Sbjct: 99  AAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGV-YPG 157

Query: 76  VVLPLLRALQLGPPKGANLGVGGDLEE-GESPASWGECGPGRGGSPGAASLRRSDERFLQ 134
            VLP  R   +G   G   G G   +  G   A  G  G G  G P              
Sbjct: 158 GVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGP-------------- 203

Query: 135 QKGDAASAPQRAPLAGGGYSVTLTT 159
           Q G     P +AP   GGY +  TT
Sbjct: 204 QPGVPLGYPIKAPKLPGGYGLPYTT 228


>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
          Length = 1240

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 9   PPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIPHKSPGPVL 68
           PPPP  PL ++GA   P A      L G GA+        P    GS   +P   P P L
Sbjct: 439 PPPPPPPLPSVGAKALPTAPPP-PPLPGLGAMAPPAPPLPP-PLPGSCEFLP--PPPPPL 494

Query: 69  PGEGVQGVVLPLLRALQLGPP 89
           PG G      PLL  +  GPP
Sbjct: 495 PGLGCPPPPPPLLPGMGWGPP 515


>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
          Length = 1249

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 9   PPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIPHKSPGPVL 68
           PPPP  PL ++GA   P A      L G GA+        P    GS   +P   P P L
Sbjct: 439 PPPPPPPLPSVGAKALPTAPPP-PPLPGLGAMAPPAPPLPP-PLPGSCEFLP--PPPPPL 494

Query: 69  PGEGVQGVVLPLLRALQLGPP 89
           PG G      PLL  +  GPP
Sbjct: 495 PGLGCPPPPPPLLPGMGWGPP 515


>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
          Length = 1499

 Score = 35.8 bits (81), Expect = 0.024
 Identities = 61/196 (31%), Positives = 75/196 (38%), Gaps = 27/196 (13%)

Query: 6   SMSPPPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLIPHKSPG 65
           ++ PP P+    A G  G P  S      KGA      + +  P  + G PG      PG
Sbjct: 511 TVGPPGPVGERGAPGNRGFP-GSDGLPGPKGAQGERGPVGSSGPKGSQGDPG-----RPG 564

Query: 66  -PVLPGE----GVQGVVLPLLRALQLGPP-KGANLGVGGDLEEGESPASWGECGP-GRGG 118
            P LPG     G  GV  P  +   LG P +    G  G +     P S G  GP G  G
Sbjct: 565 EPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSG 624

Query: 119 SPGAASLRRSDERFLQQKGDAASAPQR-APLAGG--GYSVTLTTVLLFVTFRSKIPLPAP 175
            PG             + G+A    QR AP   G  G S  +    L      + P P P
Sbjct: 625 DPGKPG----------EAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGP-PGP 673

Query: 176 TMPRALKGPRAPPGEG 191
           T  + L GP  PPGEG
Sbjct: 674 TGFQGLPGPPGPPGEG 689



 Score = 31.2 bits (69), Expect = 0.58
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 49  PNDTAGSPGLIPHKSPGPVLPGEGVQGVVLPLLRALQLGP-PKGANLGVGGDLEEGESPA 107
           P+   GSPG  P  +PG   P  G+QG  +P  R +   P PKG   G+G    EG +  
Sbjct: 739 PDGPKGSPG--PSGTPGDTGP-PGLQG--MPGERGIAGTPGPKGDRGGIGEKGAEGTAGN 793

Query: 108 SWGECGPGRGGSPGAA 123
                 PG  G PG A
Sbjct: 794 DGARGLPGPLGPPGPA 809


>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
          Length = 571

 Score = 35.4 bits (80), Expect = 0.031
 Identities = 38/124 (30%), Positives = 45/124 (36%), Gaps = 9/124 (7%)

Query: 1   MAFISSMSPPPP-LRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLI 59
           M  +    PPPP   P +     GP   +       G G  G G+     +  +G  G  
Sbjct: 1   MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60

Query: 60  PHKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGS 119
           P  SP P  P  G  G     L    L  P GA   V G   +  SP   G  G G GG 
Sbjct: 61  PRASPPPQGPLPGPPGA----LHRWALAVPPGA---VAGPRPQQASPPPCGGPG-GPGGG 112

Query: 120 PGAA 123
           PG A
Sbjct: 113 PGDA 116



 Score = 31.2 bits (69), Expect = 0.58
 Identities = 37/115 (32%), Positives = 45/115 (39%), Gaps = 17/115 (14%)

Query: 10  PPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQ----PNDTAGSPGLIPHKSPG 65
           PPP  PL      GPP A   W      GA+ AG    Q    P    G PG  P  + G
Sbjct: 65  PPPQGPLP-----GPPGALHRWALAVPPGAV-AGPRPQQASPPPCGGPGGPGGGPGDALG 118

Query: 66  PVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSP 120
               G G  GVV+ +  A+ +G   G   G G      ++P      G   GGSP
Sbjct: 119 AAAAGVGAAGVVVGVGGAVGVG---GCCSGPGHSKRRRQAPG----VGAVGGGSP 166


>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
          Length = 566

 Score = 35.4 bits (80), Expect = 0.031
 Identities = 38/124 (30%), Positives = 45/124 (36%), Gaps = 9/124 (7%)

Query: 1   MAFISSMSPPPP-LRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLI 59
           M  +    PPPP   P +     GP   +       G G  G G+     +  +G  G  
Sbjct: 1   MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60

Query: 60  PHKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGS 119
           P  SP P  P  G  G     L    L  P GA   V G   +  SP   G  G G GG 
Sbjct: 61  PRASPPPQGPLPGPPGA----LHRWALAVPPGA---VAGPRPQQASPPPCGGPG-GPGGG 112

Query: 120 PGAA 123
           PG A
Sbjct: 113 PGDA 116



 Score = 31.2 bits (69), Expect = 0.58
 Identities = 37/115 (32%), Positives = 45/115 (39%), Gaps = 17/115 (14%)

Query: 10  PPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQ----PNDTAGSPGLIPHKSPG 65
           PPP  PL      GPP A   W      GA+ AG    Q    P    G PG  P  + G
Sbjct: 65  PPPQGPLP-----GPPGALHRWALAVPPGAV-AGPRPQQASPPPCGGPGGPGGGPGDALG 118

Query: 66  PVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSP 120
               G G  GVV+ +  A+ +G   G   G G      ++P      G   GGSP
Sbjct: 119 AAAAGVGAAGVVVGVGGAVGVG---GCCSGPGHSKRRRQAPG----VGAVGGGSP 166


>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
          Length = 566

 Score = 35.4 bits (80), Expect = 0.031
 Identities = 38/124 (30%), Positives = 45/124 (36%), Gaps = 9/124 (7%)

Query: 1   MAFISSMSPPPP-LRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQPNDTAGSPGLI 59
           M  +    PPPP   P +     GP   +       G G  G G+     +  +G  G  
Sbjct: 1   MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60

Query: 60  PHKSPGPVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGS 119
           P  SP P  P  G  G     L    L  P GA   V G   +  SP   G  G G GG 
Sbjct: 61  PRASPPPQGPLPGPPGA----LHRWALAVPPGA---VAGPRPQQASPPPCGGPG-GPGGG 112

Query: 120 PGAA 123
           PG A
Sbjct: 113 PGDA 116



 Score = 31.2 bits (69), Expect = 0.58
 Identities = 37/115 (32%), Positives = 45/115 (39%), Gaps = 17/115 (14%)

Query: 10  PPPLRPLSALGAVGPPEASSCWRNLKGAGALGAGLLAFQ----PNDTAGSPGLIPHKSPG 65
           PPP  PL      GPP A   W      GA+ AG    Q    P    G PG  P  + G
Sbjct: 65  PPPQGPLP-----GPPGALHRWALAVPPGAV-AGPRPQQASPPPCGGPGGPGGGPGDALG 118

Query: 66  PVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWGECGPGRGGSP 120
               G G  GVV+ +  A+ +G   G   G G      ++P      G   GGSP
Sbjct: 119 AAAAGVGAAGVVVGVGGAVGVG---GCCSGPGHSKRRRQAPG----VGAVGGGSP 166


>gi|22538470 eomesodermin [Homo sapiens]
          Length = 686

 Score = 35.0 bits (79), Expect = 0.040
 Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 14/104 (13%)

Query: 34  LKGAGALGAGLLA----FQPNDTAGSPGLIPHKSP-------GPVLPGEGVQGVVLPLLR 82
           L+  G  G+ L A    F     AG+P    + +P       G +LP  G    V P  R
Sbjct: 146 LQSPGPQGSELAAPCSLFPYQAAAGAPHGPVYPAPNGARYPYGSMLPPGGFPAAVCPPGR 205

Query: 83  ALQLGPPKGANLGVGGDLEEGESPAS--WGECGPGRGGSPGAAS 124
           A Q GP  GA  G GG    G  P +  + +  P  G  PGAA+
Sbjct: 206 A-QFGPGAGAGSGAGGSSGGGGGPGTYQYSQGAPLYGPYPGAAA 248


>gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo
           sapiens]
          Length = 909

 Score = 35.0 bits (79), Expect = 0.040
 Identities = 41/152 (26%), Positives = 57/152 (37%), Gaps = 7/152 (4%)

Query: 9   PPPPLRPLSALGAVGPPEASSCWRNLKGAGALG---AGLLAFQPNDTAGSPGLIPHKSPG 65
           PP  LR +     +GP    +    L+G G +G    G+     +  A + G      P 
Sbjct: 681 PPLELRSVELRALLGPEVPGAVGAALRGGGEVGIQEGGVRGPPTSRPARAQGAQESPLPA 740

Query: 66  PVLPGEGVQGVVLPLLRALQLGPPKGANLGVGGDLEEG--ESPASWGECGPGRGGSPGAA 123
           P  P E V+G   P  +  + G P     G+ G  + G  + PA+      G  G  G  
Sbjct: 741 PSEPPEAVEGKASPREQG-EEGAPTQPCCGLAGGPQAGPTQQPAARSGHPNGEIGQEGLG 799

Query: 124 SLRRSD-ERFLQQKGDAASAPQRAPLAGGGYS 154
            L  S   R L  +   A AP  A  AG   S
Sbjct: 800 KLVPSPAPRELYLRATRAVAPGGAHAAGASIS 831



 Score = 29.3 bits (64), Expect = 2.2
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 17/84 (20%)

Query: 113 GPGRGGSPGAASLRRSDERFLQQKGDAASAPQRAPLAGGGYSVTLTTVLLFVTFRSKIPL 172
           GP   G+ GAA LR   E  +Q+ G       R   A G                 + PL
Sbjct: 695 GPEVPGAVGAA-LRGGGEVGIQEGGVRGPPTSRPARAQGA---------------QESPL 738

Query: 173 PAPTMP-RALKGPRAPPGEGVEGA 195
           PAP+ P  A++G  +P  +G EGA
Sbjct: 739 PAPSEPPEAVEGKASPREQGEEGA 762


>gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens]
          Length = 654

 Score = 35.0 bits (79), Expect = 0.040
 Identities = 45/156 (28%), Positives = 61/156 (39%), Gaps = 38/156 (24%)

Query: 54  GSPGLI-PHKSPG-PVLPG-EGVQGVVLPLLRALQLGPPKGANLGVGGDLEEGESPASWG 110
           G PG I P   PG P LPG +G +G         + GPP        G  E GE  A   
Sbjct: 341 GEPGFIGPQGEPGLPGLPGTKGERG---------EAGPP--------GRGERGEPGA--- 380

Query: 111 ECGPGRGGSPGAASLR--RSDERFLQQKGDAASAPQRAPLAGGG---------YSVTLTT 159
              PG  G  G +  R  +  +    +KGD+ +   R P    G         Y+  L  
Sbjct: 381 ---PGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHE 437

Query: 160 VLLFVTFRSKIPLPAPTMPRALKGPRAPPGE-GVEG 194
            L  +T  +    P P  P+ L+GP+   G  G+ G
Sbjct: 438 ALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPG 473


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,323,761
Number of Sequences: 37866
Number of extensions: 720474
Number of successful extensions: 3598
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 258
Number of HSP's that attempted gapping in prelim test: 3109
Number of HSP's gapped (non-prelim): 711
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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