Guide to the Human Genome
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Name: DDX31 Sequence: fasta or formatted (585aa) NCBI GI: 20336298
Description:

DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 2

Referenced in:

DEAD / H Helicase Family

Other entries for this name:
alt prot [851aa] DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         41           3
 C cysteine            1.5          9           1
 D aspartate           3.6         21           1
 E glutamate           5.1         30           2
 F phenylalanine       4.1         24           2
 G glycine             6.3         37           3
 H histidine           2.7         16           2
 I isoleucine          3.6         21           1
 K lysine              6.7         39           2
 L leucine            10.1         59           2
 M methionine          1.7         10           1
 N asparagine          2.6         15           2
 P proline             7.9         46           3
 Q glutamine           5.1         30           1
 R arginine            7.0         41           2
 S serine             10.8         63           3
 T threonine           5.5         32           1
 V valine              7.4         43           2
 W tryptophan          0.5          3           1
 Y tyrosine            0.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 2 ... 
DDX31                 1.000   DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1 ...
DDX18                 0.147   DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 
DDX10                 0.124   DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 
DDX47                 0.101   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
DDX49                 0.097   DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 
DDX55                 0.097   DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 
DDX27                 0.096   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DDX47                 0.094   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...
DDX23                 0.090   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
DDX41                 0.090   DEAD-box protein abstrakt 
DDX17                 0.089   DEAD box polypeptide 17 isoform 3 
DDX17                 0.089   DEAD box polypeptide 17 isoform 1 
DDX5                  0.087   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
DDX59                 0.086   DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 
DDX46                 0.086   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
DDX54                 0.086   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ...
DDX54                 0.086   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1...
DDX42                 0.085   DEAD box polypeptide 42 protein 
DDX42                 0.085   DEAD box polypeptide 42 protein 
DDX53                 0.078   DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 
DDX43                 0.078   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
DDX50                 0.078   nucleolar protein GU2 
DDX4                  0.078   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...
DDX4                  0.078   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...
DDX56                 0.077   DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 
DDX4                  0.074   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...
DDX3X                 0.071   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...
DDX3Y                 0.067   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...
DDX3Y                 0.067   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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