Guide to the Human Genome
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Name: DDX31 Sequence: fasta or formatted (851aa) NCBI GI: 17505907
Description:

DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1

Referenced in:

DEAD / H Helicase Family

Other entries for this name:
alt prot [585aa] DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         64           3
 C cysteine            1.5         13           1
 D aspartate           3.6         31           2
 E glutamate           5.2         44           2
 F phenylalanine       3.5         30           2
 G glycine             6.2         53           3
 H histidine           3.4         29           2
 I isoleucine          4.0         34           1
 K lysine              7.5         64           2
 L leucine             9.5         81           2
 M methionine          1.4         12           1
 N asparagine          2.4         20           2
 P proline             6.9         59           3
 Q glutamine           5.2         44           1
 R arginine            7.4         63           2
 S serine             10.2         87           3
 T threonine           5.2         44           1
 V valine              7.1         60           2
 W tryptophan          0.8          7           1
 Y tyrosine            1.4         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1 ... 
DDX31                 0.679   DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 2 ...
DDX18                 0.153   DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 
DDX10                 0.130   DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 
DDX55                 0.114   DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 
DDX49                 0.099   DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 
DDX47                 0.098   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
DDX27                 0.093   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DDX5                  0.090   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
DDX17                 0.089   DEAD box polypeptide 17 isoform 3 
DDX17                 0.089   DEAD box polypeptide 17 isoform 1 
DDX41                 0.086   DEAD-box protein abstrakt 
DDX46                 0.084   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
DDX42                 0.084   DEAD box polypeptide 42 protein 
DDX42                 0.084   DEAD box polypeptide 42 protein 
DDX23                 0.083   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
DDX54                 0.082   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ...
DDX54                 0.082   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1...
DDX43                 0.080   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
DDX53                 0.078   DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 
DDX4                  0.078   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...
DDX4                  0.078   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...
DDX59                 0.077   DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 
DDX4                  0.075   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...
DDX50                 0.074   nucleolar protein GU2 
DDX56                 0.069   DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 
DDX21                 0.068   DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 
DDX47                 0.064   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...
DDX28                 0.062   DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 
DDX6                  0.062   DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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