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Search of human proteins with 239751752
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
(211 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens] 447 e-126
gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo ... 447 e-126
gi|239757244 PREDICTED: hypothetical protein [Homo sapiens] 394 e-110
gi|239752133 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-05
gi|41152076 steroid-sensitive protein 1 [Homo sapiens] 45 3e-05
gi|41152074 steroid-sensitive protein 1 [Homo sapiens] 45 3e-05
gi|239746658 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 41 8e-04
gi|120587019 zinc finger protein 318 [Homo sapiens] 41 8e-04
gi|71040090 regulatory factor X, 5 [Homo sapiens] 39 0.003
gi|4557843 regulatory factor X, 5 [Homo sapiens] 39 0.003
gi|53832005 calcium channel, voltage-dependent, R type, alpha 1E... 39 0.003
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 39 0.004
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 39 0.004
gi|169177385 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|169177307 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|169167813 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|169167899 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|169167609 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 38 0.007
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 37 0.009
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 37 0.009
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|7019477 HtrA serine peptidase 2 isoform 1 preproprotein [Homo... 37 0.009
>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 447 bits (1151), Expect = e-126
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MEPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPG 60
MEPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPG
Sbjct: 1 MEPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPG 60
Query: 61 GEGGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSST 120
GEGGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSST
Sbjct: 61 GEGGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSST 120
Query: 121 EKWPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGR 180
EKWPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGR
Sbjct: 121 EKWPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGR 180
Query: 181 GAAQPRRLHRHRDLHPAPPRCSAPACAAAHL 211
GAAQPRRLHRHRDLHPAPPRCSAPACAAAHL
Sbjct: 181 GAAQPRRLHRHRDLHPAPPRCSAPACAAAHL 211
>gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo
sapiens]
Length = 211
Score = 447 bits (1151), Expect = e-126
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MEPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPG 60
MEPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPG
Sbjct: 1 MEPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPG 60
Query: 61 GEGGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSST 120
GEGGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSST
Sbjct: 61 GEGGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSST 120
Query: 121 EKWPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGR 180
EKWPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGR
Sbjct: 121 EKWPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGR 180
Query: 181 GAAQPRRLHRHRDLHPAPPRCSAPACAAAHL 211
GAAQPRRLHRHRDLHPAPPRCSAPACAAAHL
Sbjct: 181 GAAQPRRLHRHRDLHPAPPRCSAPACAAAHL 211
>gi|239757244 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 394 bits (1011), Expect = e-110
Identities = 187/188 (99%), Positives = 188/188 (100%)
Query: 24 TGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQPRP 83
+GRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQPRP
Sbjct: 3 SGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQPRP 62
Query: 84 TPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVV 143
TPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVV
Sbjct: 63 TPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVV 122
Query: 144 GGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGRGAAQPRRLHRHRDLHPAPPRCSA 203
GGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGRGAAQPRRLHRHRDLHPAPPRCSA
Sbjct: 123 GGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGRGAAQPRRLHRHRDLHPAPPRCSA 182
Query: 204 PACAAAHL 211
PACAAAHL
Sbjct: 183 PACAAAHL 190
>gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]
Length = 224
Score = 46.2 bits (108), Expect = 2e-05
Identities = 59/212 (27%), Positives = 74/212 (34%), Gaps = 28/212 (13%)
Query: 20 RPGWTGRPRGTA-RTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYP 78
RPG RP SR P R GG G R R G G +G APP A P
Sbjct: 16 RPG--SRPSSAVGEGSRVPGRRLDEGGGVQGRWKNRGRGTYRGAGPGAGSAPPGETPA-P 72
Query: 79 LQPRPTPR-LTGRSSW--------------RACTSTCSPTTLTAISSGEKCFTSSSTEKW 123
R PR T R +W AC++ SP G +E W
Sbjct: 73 YTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGW 132
Query: 124 PGSAWHLGDGQRHAGCAQVVGGER------GGAERSQ-LGLQQPLAEALVKEASGRRKSG 176
S + G +H G G A +S+ +G +P + S +
Sbjct: 133 -ASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQRRPPRGSRAARRP 191
Query: 177 QRGRGAAQPRRLHRHRDLHP-APPRCSAPACA 207
+ R PRR RHR APP C PAC+
Sbjct: 192 RARRVFTDPRRHTRHRTRRSVAPPGCFCPACS 223
>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 45.4 bits (106), Expect = 3e-05
Identities = 53/193 (27%), Positives = 78/193 (40%), Gaps = 19/193 (9%)
Query: 22 GWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQP 81
G GRP ++ DPR+A +R + +R L P PP+ RA L P
Sbjct: 299 GGAGRP-SLGSEKKKEDPRRAQVPPTRESRVKVLRKLAATAPAL--PQPPSTPRATTLPP 355
Query: 82 RPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQ 141
P +T RS+ RA T P T TA + ++ +T S + + P + + +R +
Sbjct: 356 APATTVT-RSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHR-PPTTTEVITARRPSVSEN 413
Query: 142 VVGGERGG--AERSQLGLQQPLAEAL----------VKEASGRRKSGQRGRGAAQPRRLH 189
+ R ER Q + A +L + E S R R R RR H
Sbjct: 414 LYPPSRKDQHRERPQTTRRPSKATSLESFTNAPPTTISEPSTRAAGPGRFRDNRMDRREH 473
Query: 190 RHRD--LHPAPPR 200
HRD + P PP+
Sbjct: 474 GHRDPNVVPGPPK 486
>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 45.4 bits (106), Expect = 3e-05
Identities = 53/193 (27%), Positives = 78/193 (40%), Gaps = 19/193 (9%)
Query: 22 GWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQP 81
G GRP ++ DPR+A +R + +R L P PP+ RA L P
Sbjct: 299 GGAGRP-SLGSEKKKEDPRRAQVPPTRESRVKVLRKLAATAPAL--PQPPSTPRATTLPP 355
Query: 82 RPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQ 141
P +T RS+ RA T P T TA + ++ +T S + + P + + +R +
Sbjct: 356 APATTVT-RSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHR-PPTTTEVITARRPSVSEN 413
Query: 142 VVGGERGG--AERSQLGLQQPLAEAL----------VKEASGRRKSGQRGRGAAQPRRLH 189
+ R ER Q + A +L + E S R R R RR H
Sbjct: 414 LYPPSRKDQHRERPQTTRRPSKATSLESFTNAPPTTISEPSTRAAGPGRFRDNRMDRREH 473
Query: 190 RHRD--LHPAPPR 200
HRD + P PP+
Sbjct: 474 GHRDPNVVPGPPK 486
>gi|239746658 PREDICTED: hypothetical protein [Homo sapiens]
Length = 411
Score = 43.5 bits (101), Expect = 1e-04
Identities = 63/233 (27%), Positives = 82/233 (35%), Gaps = 34/233 (14%)
Query: 7 WLRLAVGPGPTLVRPGWTG---RPRGTARTS---RQPDPRQAAG---GSDGGTRARRIRA 57
W AV GP RPG R G + S R+ +P + G S G R R
Sbjct: 180 WDPNAVAAGPRPGRPGLRSHVTRYMGYSSLSEGFRELEPHRMKGFTAHSPQGRWKNRGRG 239
Query: 58 HPGGEGGLSGPAPPARRRAYPLQPRPTPRL-TGRSSW--------------RACTSTCSP 102
G G +G APP A P R PR T R +W AC++ SP
Sbjct: 240 TYRGAGPGAGSAPPGETPA-PYTRRSGPRSRTWRRTWCWTGDSAAVGAAAVLACSARLSP 298
Query: 103 TTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVVGGER------GGAERSQ-L 155
G +E W S + G +H G G A +S+ +
Sbjct: 299 ADGFGAEEGPLAHLEERSEGW-ASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGV 357
Query: 156 GLQQPLAEALVKEASGRRKSGQRGRGAAQPRRLHRHRDLHP-APPRCSAPACA 207
G +P + S + + R PRR RHR APP C PAC+
Sbjct: 358 GAGKPEPQRRPPRGSRAARRPRARRVFTDPRRHTRHRTRRSVAPPGCFCPACS 410
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 42.7 bits (99), Expect = 2e-04
Identities = 27/63 (42%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 14 PGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPAR 73
PGP P RG A R A G DGG RR A PGG GG SG P
Sbjct: 46 PGPAAPSPP----ARGAAAWGRSGGGPAAQSGGDGGGLPRRAGAEPGGRGGGSGGTMPGG 101
Query: 74 RRA 76
RRA
Sbjct: 102 RRA 104
Score = 28.1 bits (61), Expect = 5.7
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 8/55 (14%)
Query: 45 GSDGGTRARRIRAHPGGEGGLSGPA------PPARRRAYPLQPRPTPRLTGRSSW 93
G G RAR G+ GP PP R+R P P P R G ++W
Sbjct: 9 GDQAGERARAPSGGGSGQAQRPGPGRGSWRRPPRRQRPGPAAPSPPAR--GAAAW 61
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 42.4 bits (98), Expect = 3e-04
Identities = 65/216 (30%), Positives = 78/216 (36%), Gaps = 46/216 (21%)
Query: 6 TWLRLAVGPG--------PTLVRPGWTGRPRGT-ARTSRQPDPRQAAGGSDGGTRARRIR 56
TWLR+ GP P RP R R AR +R P P++ AGG GG +
Sbjct: 48 TWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGP-PKRPAGGQTGG-----VE 101
Query: 57 AHPGGEGGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFT 116
A G E S P P R P +PRP P GR R +P + + EK
Sbjct: 102 AASGEE--RSQPRRPRRPPPAPRRPRPAP---GR---RKSLYEAAP-----LLTREKGGR 148
Query: 117 SSSTEKWPGSAWHL-------GDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEA 169
S GS W G G AG G RGG + ++P E
Sbjct: 149 SGRRGDRGGSGWSHGHTARVGGTGDSSAGLTTFPGSSRGGFSGRE---EEPRRER----- 200
Query: 170 SGRRKSGQRGRGAAQPRRLHRHRDLHPAPPRCSAPA 205
R+ S QR A P R PA PR A
Sbjct: 201 --RQPSLQRSTPPA-PTYSPRSDPRDPAAPRAGPEA 233
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 42.4 bits (98), Expect = 3e-04
Identities = 65/216 (30%), Positives = 78/216 (36%), Gaps = 46/216 (21%)
Query: 6 TWLRLAVGPG--------PTLVRPGWTGRPRGT-ARTSRQPDPRQAAGGSDGGTRARRIR 56
TWLR+ GP P RP R R AR +R P P++ AGG GG +
Sbjct: 48 TWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGP-PKRPAGGQTGG-----VE 101
Query: 57 AHPGGEGGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFT 116
A G E S P P R P +PRP P GR R +P + + EK
Sbjct: 102 AASGEE--RSQPRRPRRPPPAPRRPRPAP---GR---RKSLYEAAP-----LLTREKGGR 148
Query: 117 SSSTEKWPGSAWHL-------GDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEA 169
S GS W G G AG G RGG + ++P E
Sbjct: 149 SGRRGDRGGSGWSHGHTARVGGTGDSSAGLTTFPGSSRGGFSGRE---EEPRRER----- 200
Query: 170 SGRRKSGQRGRGAAQPRRLHRHRDLHPAPPRCSAPA 205
R+ S QR A P R PA PR A
Sbjct: 201 --RQPSLQRSTPPA-PTYSPRSDPRDPAAPRAGPEA 233
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 40.8 bits (94), Expect = 8e-04
Identities = 64/211 (30%), Positives = 77/211 (36%), Gaps = 36/211 (17%)
Query: 6 TWLRLAVGPG--------PTLVRPGWTGRPRGT-ARTSRQPDPRQAAGGSDGGTRARRIR 56
TWLR+ GP P RP R R AR +R P P++ AGG GG +
Sbjct: 48 TWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGP-PKRPAGGQTGG-----VE 101
Query: 57 AHPGGEGGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSP--TTLTAISSGEKC 114
A G E S P P R P +PRP P GR R +P T SG +
Sbjct: 102 AASGEE--RSQPRRPRRPPPAPRRPRPAP---GR---RKSLYEAAPLLTREKGGRSGRRG 153
Query: 115 FTSSSTEKWPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEASGRRK 174
S +A G G AG G RGG + ++P E R+
Sbjct: 154 DRGDSGWSHGHTARVGGTGDSSAGLTTFPGSSRGGFSGRE---EEPRRER-------RQP 203
Query: 175 SGQRGRGAAQPRRLHRHRDLHPAPPRCSAPA 205
S QR A P R PA PR A
Sbjct: 204 SLQRSTPPA-PTYSPRSDPRDPAAPRAGPEA 233
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 40.8 bits (94), Expect = 8e-04
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 13 GPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPA 72
G GP R +G G AR S P P GS T ARR R+ G G + P+PP
Sbjct: 20 GGGPRSGRS--SGSSSGPARRSSPPPP---PSGSSSRTPARRPRSPSGHRGRRASPSPPR 74
Query: 73 RRRAYPLQPR 82
RR P PR
Sbjct: 75 GRRVSPSPPR 84
Score = 28.1 bits (61), Expect = 5.7
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 28 RGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQP 81
R AR R P + S R RR+ P P+PP RR +P P
Sbjct: 51 RTPARRPRSPSGHRGRRASPSPPRGRRVSPSP-PRARRGSPSPPRGRRLFPPGP 103
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 38.9 bits (89), Expect = 0.003
Identities = 46/189 (24%), Positives = 65/189 (34%), Gaps = 24/189 (12%)
Query: 13 GPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTR---ARRIRAHPGGEGGLSGPA 69
GPGP PG +PRGT + R+ G D G +R P E SG A
Sbjct: 395 GPGPGRAPPGGLTQPRGT-------ENREVGIGGDQGPHDKGVKRTAEVPVSEA--SGQA 445
Query: 70 PPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWH 129
PPA+ ++ + R R + T + S S+ + + P W
Sbjct: 446 PPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERNSTPLKSA-AAMESAQSSRLPWETWG 504
Query: 130 LGDGQRHAGCAQVVGGERGGAER-SQLGLQQPLAEALVKEASGRRKSGQRGRGAAQPRRL 188
G G GGAER +G + A + G G RG G+ +
Sbjct: 505 SGG----------EGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVSKGGRGPGSQHTKEA 554
Query: 189 HRHRDLHPA 197
L P+
Sbjct: 555 EDKIPLVPS 563
>gi|4557843 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 38.9 bits (89), Expect = 0.003
Identities = 46/189 (24%), Positives = 65/189 (34%), Gaps = 24/189 (12%)
Query: 13 GPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTR---ARRIRAHPGGEGGLSGPA 69
GPGP PG +PRGT + R+ G D G +R P E SG A
Sbjct: 395 GPGPGRAPPGGLTQPRGT-------ENREVGIGGDQGPHDKGVKRTAEVPVSEA--SGQA 445
Query: 70 PPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWH 129
PPA+ ++ + R R + T + S S+ + + P W
Sbjct: 446 PPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERNSTPLKSA-AAMESAQSSRLPWETWG 504
Query: 130 LGDGQRHAGCAQVVGGERGGAER-SQLGLQQPLAEALVKEASGRRKSGQRGRGAAQPRRL 188
G G GGAER +G + A + G G RG G+ +
Sbjct: 505 SGG----------EGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVSKGGRGPGSQHTKEA 554
Query: 189 HRHRDLHPA 197
L P+
Sbjct: 555 EDKIPLVPS 563
>gi|53832005 calcium channel, voltage-dependent, R type, alpha 1E
subunit [Homo sapiens]
Length = 2270
Score = 38.9 bits (89), Expect = 0.003
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 31/180 (17%)
Query: 28 RGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPA----------RRRAY 77
RGT P+ RQ+ S+G ++ + G G LS + P+ RR+
Sbjct: 2062 RGTQADWESPERRQSRSPSEGRSQTPNRQ----GTGSLSESSIPSVSDTSTPRRSRRQLP 2117
Query: 78 PLQPRPTPRLTGRSSWRACTSTC---------SPTTLTAISSGEKCFTSSSTEKWPGSAW 128
P+ P+P P L+ S R S SP T A+ S C T SS P +
Sbjct: 2118 PVPPKPRPLLSYSSLIRHAGSISPPADGSEEGSPLTSQALESNNACLTESSNSPHPQQSQ 2177
Query: 129 HLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLA-EALVKEASGRRKSGQRGRGAAQPRR 187
H QR+ + E A S G ++ L EA V + GR + G+A P R
Sbjct: 2178 H-ASPQRYISEPYLALHEDSHA--SDCGEEETLTFEAAVATSLGRSNT----IGSAPPLR 2230
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 38.5 bits (88), Expect = 0.004
Identities = 62/218 (28%), Positives = 74/218 (33%), Gaps = 33/218 (15%)
Query: 3 PPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGE 62
PP +L +V G T R AR ++ P P A GS GG P
Sbjct: 91 PPERFLPSSVSAGSA----ARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGPPRG 146
Query: 63 GGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEK 122
GLS PP+ R P PRP P + A GEK +
Sbjct: 147 RGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGGGEKGNRNM---- 202
Query: 123 WPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGL-------QQPLAEALVKEASGRRKS 175
+A LGD R A AQ G R L L P A GR +
Sbjct: 203 ---AAAPLGDPAREAAQAQT-----GLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRV 254
Query: 176 G-----QRGRGAAQPRRLHRHRDLHPAPPRCSAPACAA 208
G ++ G A R L R + PAP C ACAA
Sbjct: 255 GAALTEEQAAGEAAARGLWRRK---PAP--CPRGACAA 287
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 38.5 bits (88), Expect = 0.004
Identities = 62/218 (28%), Positives = 74/218 (33%), Gaps = 33/218 (15%)
Query: 3 PPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGE 62
PP +L +V G T R AR ++ P P A GS GG P
Sbjct: 91 PPERFLPSSVSAGSA----ARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGPPRG 146
Query: 63 GGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEK 122
GLS PP+ R P PRP P + A GEK +
Sbjct: 147 RGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGGGEKGNRNM---- 202
Query: 123 WPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGL-------QQPLAEALVKEASGRRKS 175
+A LGD R A AQ G R L L P A GR +
Sbjct: 203 ---AAAPLGDPAREAAQAQT-----GLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRV 254
Query: 176 G-----QRGRGAAQPRRLHRHRDLHPAPPRCSAPACAA 208
G ++ G A R L R + PAP C ACAA
Sbjct: 255 GAALTEEQAAGEAAARGLWRRK---PAP--CPRGACAA 287
>gi|169177385 PREDICTED: hypothetical protein [Homo sapiens]
Length = 223
Score = 38.1 bits (87), Expect = 0.005
Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 2 EPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGG 61
+P P WLR A G PT +R R RG T+RQ R+ D GT RA PG
Sbjct: 160 QPHPRWLRTAPGAAPTSLR-----RRRGVGVTARQALRREGMRACDSGT----YRASPGE 210
Query: 62 EG 63
G
Sbjct: 211 PG 212
>gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]
Length = 223
Score = 38.1 bits (87), Expect = 0.005
Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 2 EPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGG 61
+P P WLR A G PT +R R RG T+RQ R+ D GT RA PG
Sbjct: 160 QPHPRWLRTAPGAAPTSLR-----RRRGAGVTARQALRREGMRACDSGT----YRASPGE 210
Query: 62 EG 63
G
Sbjct: 211 PG 212
>gi|169167813 PREDICTED: hypothetical protein [Homo sapiens]
Length = 260
Score = 37.7 bits (86), Expect = 0.007
Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 22/127 (17%)
Query: 26 RPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEG-GLSGPAPPARRRAYPLQPRPT 84
R R SR P P + SD + R+R G G G SGP P+ P P P
Sbjct: 62 RQRKIKPDSRSPTPVPPSFASD---QRARVRVCAGANGAGASGPRGPS-----PGSPPPP 113
Query: 85 PRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVVG 144
+ R R C+S C S F W AW L AGC Q G
Sbjct: 114 GLSSSRRRHRHCSSRCCRCRRRRRSLALLLF------PWLRPAWQL------AGC-QAWG 160
Query: 145 GERGGAE 151
GERG E
Sbjct: 161 GERGRGE 167
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 37.7 bits (86), Expect = 0.007
Identities = 57/205 (27%), Positives = 74/205 (36%), Gaps = 20/205 (9%)
Query: 4 PPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTR-ARRIRAHPGGE 62
P T+ + GP P G PR R+P PR+ S G R A RA P +
Sbjct: 89 PLTFREASPGPAP--------GAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQ 140
Query: 63 GGLSGPAPPARRRAYPLQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEK 122
L+ P R ++P P L R R C C L + S+S
Sbjct: 141 RSLARCLP--RSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASP-- 196
Query: 123 WPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGRGA 182
P A L G R + R AERS G PL +L + G G R R
Sbjct: 197 -PRLAAPLA-GSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSL---SRGGEVVGARRRRG 251
Query: 183 AQPRRLHRHRD--LHPAPPRCSAPA 205
+ RR+ R +PP + PA
Sbjct: 252 GEERRVRGRRQGCALGSPPIPAGPA 276
>gi|169167899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 260
Score = 37.7 bits (86), Expect = 0.007
Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 22/127 (17%)
Query: 26 RPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEG-GLSGPAPPARRRAYPLQPRPT 84
R R SR P P + SD + R+R G G G SGP P+ P P P
Sbjct: 62 RQRKIKPDSRSPTPVPPSFASD---QRARVRVCAGANGAGASGPRGPS-----PGSPPPP 113
Query: 85 PRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVVG 144
+ R R C+S C S F W AW L AGC Q G
Sbjct: 114 GLSSSRRRHRHCSSRCCRCRRRRRSLALLLF------PWLRPAWQL------AGC-QAWG 160
Query: 145 GERGGAE 151
GERG E
Sbjct: 161 GERGRGE 167
>gi|169167609 PREDICTED: hypothetical protein [Homo sapiens]
Length = 260
Score = 37.7 bits (86), Expect = 0.007
Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 22/127 (17%)
Query: 26 RPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEG-GLSGPAPPARRRAYPLQPRPT 84
R R SR P P + SD + R+R G G G SGP P+ P P P
Sbjct: 62 RQRKIKPDSRSPTPVPPSFASD---QRARVRVCAGANGAGASGPRGPS-----PGSPPPP 113
Query: 85 PRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVVG 144
+ R R C+S C S F W AW L AGC Q G
Sbjct: 114 GLSSSRRRHRHCSSCCCRCRRRRRSLALLLF------PWLRPAWQL------AGC-QAWG 160
Query: 145 GERGGAE 151
GERG E
Sbjct: 161 GERGRGE 167
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 37.7 bits (86), Expect = 0.007
Identities = 40/153 (26%), Positives = 52/153 (33%), Gaps = 35/153 (22%)
Query: 2 EPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTR---------- 51
+PPP RLA+GP P+L GW G + P +AGG G ++
Sbjct: 1034 DPPP---RLALGPQPSL--RGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYFQLP 1088
Query: 52 -----------ARRIRAHPG---------GEGGLSGPAPPARRRAYPLQPRPTPRLTGRS 91
AR R G GE G PPA P P+P P + S
Sbjct: 1089 PRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQPPPAVAAPS 1148
Query: 92 SWRACTSTCSPTTLTAISSGEKCFTSSSTEKWP 124
+ + SS + SSTE P
Sbjct: 1149 EKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEP 1181
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 37.4 bits (85), Expect = 0.009
Identities = 52/203 (25%), Positives = 71/203 (34%), Gaps = 29/203 (14%)
Query: 3 PPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRI-RAHPGG 61
PPP+ R P PT G G P R+ + A S G TR I R+ P
Sbjct: 1166 PPPSGAR---SPAPTRKEFGGIGAPPSPGVARREME----APKSPGTTRKDNIGRSQPSP 1218
Query: 62 EGGLSGPAPPARRRAYP-LQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSST 120
+ GL+GP P A P + PR +S RA +P + + S K T
Sbjct: 1219 QAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPE 1278
Query: 121 EKWPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGR 180
P +A+ + S Q L E LV A+ +SG +
Sbjct: 1279 PLKPQAAF--------------------PPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPN 1318
Query: 181 GAAQPRRLHRHRDLHPAPPRCSA 203
P+ R R H P S+
Sbjct: 1319 LETPPQPPPRSRSSHSLPSEASS 1341
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 37.4 bits (85), Expect = 0.009
Identities = 52/203 (25%), Positives = 71/203 (34%), Gaps = 29/203 (14%)
Query: 3 PPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRI-RAHPGG 61
PPP+ R P PT G G P R+ + A S G TR I R+ P
Sbjct: 1166 PPPSGAR---SPAPTRKEFGGIGAPPSPGVARREME----APKSPGTTRKDNIGRSQPSP 1218
Query: 62 EGGLSGPAPPARRRAYP-LQPRPTPRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSST 120
+ GL+GP P A P + PR +S RA +P + + S K T
Sbjct: 1219 QAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPE 1278
Query: 121 EKWPGSAWHLGDGQRHAGCAQVVGGERGGAERSQLGLQQPLAEALVKEASGRRKSGQRGR 180
P +A+ + S Q L E LV A+ +SG +
Sbjct: 1279 PLKPQAAF--------------------PPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPN 1318
Query: 181 GAAQPRRLHRHRDLHPAPPRCSA 203
P+ R R H P S+
Sbjct: 1319 LETPPQPPPRSRSSHSLPSEASS 1341
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.4 bits (85), Expect = 0.009
Identities = 52/171 (30%), Positives = 64/171 (37%), Gaps = 36/171 (21%)
Query: 20 RPGWTGRP-RGTARTSRQPDPRQAAGGSDG--GTRARRIRAHP--------------GGE 62
R GW RP R +R + PR A G G A R+ H G E
Sbjct: 147 RRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSE 206
Query: 63 GGLSG--PAPPARRRAYPLQPRP--------TPRLTGRSSWRACTSTCSPTTLTAISS-G 111
GG G P+PP R+ +PRP R TGR++ P SS G
Sbjct: 207 GGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRG 266
Query: 112 EKCFTSSSTEKWP---GSAWH-LGDGQRHAGCAQVVGGERGGAERSQLGLQ 158
TS S P G+ H DG+ GCAQ+ R G + GLQ
Sbjct: 267 RGAATSVSAAARPTRGGARGHRRADGRARGGCAQL----RAGTPSAPGGLQ 313
Score = 29.3 bits (64), Expect = 2.6
Identities = 24/69 (34%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 25 GRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARR-----RAYPL 79
GR RG R P G D R AHP G P P A R + PL
Sbjct: 292 GRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPL 351
Query: 80 -QPRPTPRL 87
QP P P+L
Sbjct: 352 PQPPPPPKL 360
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.4 bits (85), Expect = 0.009
Identities = 52/171 (30%), Positives = 64/171 (37%), Gaps = 36/171 (21%)
Query: 20 RPGWTGRP-RGTARTSRQPDPRQAAGGSDG--GTRARRIRAHP--------------GGE 62
R GW RP R +R + PR A G G A R+ H G E
Sbjct: 147 RRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSE 206
Query: 63 GGLSG--PAPPARRRAYPLQPRP--------TPRLTGRSSWRACTSTCSPTTLTAISS-G 111
GG G P+PP R+ +PRP R TGR++ P SS G
Sbjct: 207 GGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRG 266
Query: 112 EKCFTSSSTEKWP---GSAWH-LGDGQRHAGCAQVVGGERGGAERSQLGLQ 158
TS S P G+ H DG+ GCAQ+ R G + GLQ
Sbjct: 267 RGAATSVSAAARPTRGGARGHRRADGRARGGCAQL----RAGTPSAPGGLQ 313
Score = 29.3 bits (64), Expect = 2.6
Identities = 24/69 (34%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 25 GRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARR-----RAYPL 79
GR RG R P G D R AHP G P P A R + PL
Sbjct: 292 GRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPL 351
Query: 80 -QPRPTPRL 87
QP P P+L
Sbjct: 352 PQPPPPPKL 360
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.4 bits (85), Expect = 0.009
Identities = 52/171 (30%), Positives = 64/171 (37%), Gaps = 36/171 (21%)
Query: 20 RPGWTGRP-RGTARTSRQPDPRQAAGGSDG--GTRARRIRAHP--------------GGE 62
R GW RP R +R + PR A G G A R+ H G E
Sbjct: 147 RRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSE 206
Query: 63 GGLSG--PAPPARRRAYPLQPRP--------TPRLTGRSSWRACTSTCSPTTLTAISS-G 111
GG G P+PP R+ +PRP R TGR++ P SS G
Sbjct: 207 GGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRG 266
Query: 112 EKCFTSSSTEKWP---GSAWH-LGDGQRHAGCAQVVGGERGGAERSQLGLQ 158
TS S P G+ H DG+ GCAQ+ R G + GLQ
Sbjct: 267 RGAATSVSAAARPTRGGARGHRRADGRARGGCAQL----RAGTPSAPGGLQ 313
Score = 29.3 bits (64), Expect = 2.6
Identities = 24/69 (34%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 25 GRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARR-----RAYPL 79
GR RG R P G D R AHP G P P A R + PL
Sbjct: 292 GRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPL 351
Query: 80 -QPRPTPRL 87
QP P P+L
Sbjct: 352 PQPPPPPKL 360
>gi|7019477 HtrA serine peptidase 2 isoform 1 preproprotein [Homo
sapiens]
Length = 458
Score = 37.4 bits (85), Expect = 0.009
Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 4 PPTWLRLAVG-PGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGE 62
P W RL+VG P T PR T+ PD R + GTR+R A G
Sbjct: 55 PSLWARLSVGVTEPRACLTSGTPGPRAQL-TAVTPDTRTREASENSGTRSRAWLAVALGA 113
Query: 63 GGL-------SGPAPPARRRAYPLQPRPTPR 86
GG G PPA A P P +PR
Sbjct: 114 GGAVLLLLWGGGRGPPAVLAAVPSPPPASPR 144
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,035,902
Number of Sequences: 37866
Number of extensions: 730860
Number of successful extensions: 5131
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 442
Number of HSP's that attempted gapping in prelim test: 4594
Number of HSP's gapped (non-prelim): 969
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.