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Search of human proteins with 239751736
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]
(261 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751736 PREDICTED: hypothetical protein [Homo sapiens] 541 e-154
gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo ... 541 e-154
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 50 3e-06
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 48 1e-05
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 46 4e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 43 2e-04
gi|19924099 synapsin I isoform Ia [Homo sapiens] 43 2e-04
gi|19924097 synapsin I isoform Ib [Homo sapiens] 43 2e-04
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 43 3e-04
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 43 3e-04
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 42 4e-04
gi|239753786 PREDICTED: hypothetical protein LOC100129786 [Homo ... 42 5e-04
gi|169167301 PREDICTED: hypothetical protein LOC100129786 [Homo ... 42 5e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 42 5e-04
gi|169166477 PREDICTED: hypothetical protein LOC100129786 [Homo ... 42 5e-04
gi|11761629 fibrinogen, alpha polypeptide isoform alpha prepropr... 42 7e-04
gi|4503689 fibrinogen, alpha polypeptide isoform alpha-E preprop... 42 7e-04
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens] 42 7e-04
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 41 0.001
gi|239755142 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo ... 41 0.001
gi|4507917 WEE1 tyrosine kinase isoform 1 [Homo sapiens] 41 0.001
gi|57864582 hornerin [Homo sapiens] 40 0.002
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.002
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.002
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 40 0.002
>gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 541 bits (1394), Expect = e-154
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MSGVQSRWAHSRRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKA 60
MSGVQSRWAHSRRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKA
Sbjct: 1 MSGVQSRWAHSRRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKA 60
Query: 61 SRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAER 120
SRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAER
Sbjct: 61 SRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAER 120
Query: 121 SAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQ 180
SAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQ
Sbjct: 121 SAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQ 180
Query: 181 RLGPGRRELLMARSFPDPILARPELHGRWPGPAGTPAPPGASRELRTSLWRWVNLGVWSA 240
RLGPGRRELLMARSFPDPILARPELHGRWPGPAGTPAPPGASRELRTSLWRWVNLGVWSA
Sbjct: 181 RLGPGRRELLMARSFPDPILARPELHGRWPGPAGTPAPPGASRELRTSLWRWVNLGVWSA 240
Query: 241 TAPACGRGTRAGTASSALGPS 261
TAPACGRGTRAGTASSALGPS
Sbjct: 241 TAPACGRGTRAGTASSALGPS 261
>gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo
sapiens]
Length = 261
Score = 541 bits (1394), Expect = e-154
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MSGVQSRWAHSRRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKA 60
MSGVQSRWAHSRRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKA
Sbjct: 1 MSGVQSRWAHSRRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKA 60
Query: 61 SRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAER 120
SRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAER
Sbjct: 61 SRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAER 120
Query: 121 SAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQ 180
SAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQ
Sbjct: 121 SAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQ 180
Query: 181 RLGPGRRELLMARSFPDPILARPELHGRWPGPAGTPAPPGASRELRTSLWRWVNLGVWSA 240
RLGPGRRELLMARSFPDPILARPELHGRWPGPAGTPAPPGASRELRTSLWRWVNLGVWSA
Sbjct: 181 RLGPGRRELLMARSFPDPILARPELHGRWPGPAGTPAPPGASRELRTSLWRWVNLGVWSA 240
Query: 241 TAPACGRGTRAGTASSALGPS 261
TAPACGRGTRAGTASSALGPS
Sbjct: 241 TAPACGRGTRAGTASSALGPS 261
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 49.7 bits (117), Expect = 3e-06
Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 44/236 (18%)
Query: 16 RGSWRTRSRQEARPGGGSRARPGPG-AGPGGEVLGRSSSTPASSKASRTAQ--------- 65
RGS R AR G RA G G AG GG + R+ ++A + A+
Sbjct: 21 RGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGD 80
Query: 66 MRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSA-ERSAAS 124
++ ++ G+ P S+ S + V G G P+ P+ A +Q+ R +AS
Sbjct: 81 LQVSSGPGAAPPAEFRASARSAQGSRDVPA-GPGFPPRLPRPFTSASFSNQTRLRRRSAS 139
Query: 125 STPPEKTCAPGMKPWC------------------GERCSSSSRKPSAGGGRDGGVAVSGR 166
+ P + C P C G ++ + + +AGGGR V+GR
Sbjct: 140 ALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGR 199
Query: 167 DQPAARTMLAAR----------RQRLGPGRRELLMARSFPDPILARPELHGRWPGP 212
D A L R R+RLG G R R P P RW P
Sbjct: 200 DAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPP----RAPARGARWLRP 251
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 49.7 bits (117), Expect = 3e-06
Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 44/236 (18%)
Query: 16 RGSWRTRSRQEARPGGGSRARPGPG-AGPGGEVLGRSSSTPASSKASRTAQ--------- 65
RGS R AR G RA G G AG GG + R+ ++A + A+
Sbjct: 21 RGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGD 80
Query: 66 MRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSA-ERSAAS 124
++ ++ G+ P S+ S + V G G P+ P+ A +Q+ R +AS
Sbjct: 81 LQVSSGPGAAPPAEFRASARSAQGSRDVPA-GPGFPPRLPRPFTSASFSNQTRLRRRSAS 139
Query: 125 STPPEKTCAPGMKPWC------------------GERCSSSSRKPSAGGGRDGGVAVSGR 166
+ P + C P C G ++ + + +AGGGR V+GR
Sbjct: 140 ALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGR 199
Query: 167 DQPAARTMLAAR----------RQRLGPGRRELLMARSFPDPILARPELHGRWPGP 212
D A L R R+RLG G R R P P RW P
Sbjct: 200 DAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPP----RAPARGARWLRP 251
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 47.8 bits (112), Expect = 1e-05
Identities = 74/279 (26%), Positives = 96/279 (34%), Gaps = 75/279 (26%)
Query: 16 RGSWRTR---SRQEARPGGG----------SRARPGPGAGPGGEVLGRSSSTPASSKASR 62
R WR+R R+E GGG SRA P P A GG GRS P + + R
Sbjct: 11 RRLWRSRVVPDREEGGSGGGGGGDEDGSLGSRAEPAPRAREGGG-CGRSEVRPVAPRRPR 69
Query: 63 TAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSA 122
A ++ GAG R + GGP P +E A
Sbjct: 70 DAVGQRGA-------------------------QGAGRRRRAGGP------PRPMSEPGA 98
Query: 123 ASSTPPEKTCAPGMKPWCGE------RCSSSSRKPSAGGGRDGGVAVSGRD-QPA----- 170
+ + PG W E C S + +AG RD ++G +PA
Sbjct: 99 GAGSSLLDVAEPGGPGWLPESDCETVTCCLFSERDAAGAPRDASDPLAGAALEPAGGGRS 158
Query: 171 --ARTMLAARRQRLGPGRRELL--MARSFPDPILARPELHGRWPGP-----------AGT 215
AR+ L Q L LL + D +L E G PG G
Sbjct: 159 REARSRLLLLEQELKTVTYSLLKRLKERSLDTLLEAVESRGGVPGGCVLVPRADLRLGGQ 218
Query: 216 PAPPGASRELRTSLWRWVNLGVWSATAPACGRGTRAGTA 254
PAPP + L L+RW +L P CG + A A
Sbjct: 219 PAPP---QLLLGRLFRWPDLQHAVELKPLCGCHSFAAAA 254
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 45.8 bits (107), Expect = 4e-05
Identities = 62/243 (25%), Positives = 91/243 (37%), Gaps = 32/243 (13%)
Query: 9 AHSRRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVL-------------GRSSSTP 55
+ SR R S R+RSR AR G P G ++ GRS S+
Sbjct: 669 SRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSS 728
Query: 56 ASSKASRTAQMRKATSSGSVPVLSVLWS----SVSGSDGKAV-------RLNGAGPRPKR 104
SRT+Q R ++S S + S S+S KA L+G+ P PK+
Sbjct: 729 ERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQ 788
Query: 105 GGPWCGAKRPSQSAERSAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVS 164
+ S S++ A S TPP ++ + P ++ + SR+ + V
Sbjct: 789 KSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPP-PKQKSKTPSRQSHSSSSPHPKVKSG 847
Query: 165 GRDQPAARTMLAARRQRLGPGRRELLMARSFPDPIL-----ARPELHGRWPGPAGTPAPP 219
+ + T A Q + P RR S PDP L +R G P + PP
Sbjct: 848 TPPRQGSITSPQANEQSVTPQRRSCF--ESSPDPELKSRTPSRHSCSGSSPPRVKSSTPP 905
Query: 220 GAS 222
S
Sbjct: 906 RQS 908
Score = 37.7 bits (86), Expect = 0.010
Identities = 46/167 (27%), Positives = 65/167 (38%), Gaps = 22/167 (13%)
Query: 20 RTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLS 79
RT Q +R G P A P + S S+P S +RT +R+ + SGS P +
Sbjct: 1530 RTPLGQRSRSGSSQELDVKPSASP--QERSESDSSPDSKAKTRTP-LRQRSRSGSSPEV- 1585
Query: 80 VLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAER--SAASSTPPEKTCAPGMK 137
D K+ RL+ PR R G K ++A R S + S+P K AP
Sbjct: 1586 ---------DSKS-RLS---PRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRAL 1632
Query: 138 PWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGP 184
P R S S G +G + + ++ A R R P
Sbjct: 1633 P---RRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSP 1676
Score = 37.0 bits (84), Expect = 0.017
Identities = 60/251 (23%), Positives = 75/251 (29%), Gaps = 29/251 (11%)
Query: 7 RWAHSRRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSS-TPASSKASRTAQ 65
R SR R W +RSR R G AR G GRS S TPA SR+
Sbjct: 530 RRGRSRSPQRPGW-SRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRT 588
Query: 66 MRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAAS- 124
+ S P S G++ A R + P R A RS S
Sbjct: 589 PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSR 648
Query: 125 ----------------------STPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVA 162
S P + R S SR P G R +
Sbjct: 649 SRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLV 708
Query: 163 VSGRDQ---PAARTMLAARRQRLGPGRRELLMARSFPDPILARPELHGRWPGPAGTPAPP 219
GR P R + +R R +RS P + + + R +P
Sbjct: 709 RRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSK 768
Query: 220 GASR-ELRTSL 229
SR LR SL
Sbjct: 769 AKSRLSLRRSL 779
Score = 34.7 bits (78), Expect = 0.086
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 28/146 (19%)
Query: 50 RSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWC 109
RSSS+ +SS +S ++ ++SS S SS S S + + + P P + GP
Sbjct: 2606 RSSSSSSSSSSSSSSSSSSSSSSSSS-------SSSSSSSSSSSSSSSSSPSPAKPGPQA 2658
Query: 110 -----GAKRPSQSAERSAASSTP-------------PEKTCAPGMKPWCGERCSSSSRKP 151
K+P RS + P P + P +P ++ SSSS +
Sbjct: 2659 LPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERG 2718
Query: 152 SAGGGRDGGVAVS---GRDQPAARTM 174
S G R + S R+ P+ R M
Sbjct: 2719 SRRGQRGDSRSPSHKRRRETPSPRPM 2744
Score = 33.9 bits (76), Expect = 0.15
Identities = 65/259 (25%), Positives = 91/259 (35%), Gaps = 42/259 (16%)
Query: 25 QEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQM---------------RKA 69
+ +R G S+ R GP E + S+P SRTA+ +
Sbjct: 1634 RRSRSGSSSKGR-----GPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRR 1688
Query: 70 TSSGSVPVLS--VLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRP---SQSAERSAAS 124
SS S P L+ S S S + P R P + P S+S+ R ++
Sbjct: 1689 RSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSA 1748
Query: 125 STPPEKTC-----APGMKPWCGERCSSSSRKPSAGGGR-----DGGVAVSGRDQPAARTM 174
S+P KT +P KP +R S SR+ R + S R Q +
Sbjct: 1749 SSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRS 1808
Query: 175 LAARRQRLGPGRRELLMARSFPDPILARPELHGRWPGPAGTPAPPGASRELRTSLWRWVN 234
RR+R G G AR +R R G + TP RTS W
Sbjct: 1809 RVTRRRRGGSGYHSRSPARQESSRTSSR-----RRRGRSRTPPTSRKRSRSRTSPAPWKR 1863
Query: 235 LGVWSATAPACGRGTRAGT 253
S +PA R +R+ T
Sbjct: 1864 SR--SRASPATHRRSRSRT 1880
Score = 30.8 bits (68), Expect = 1.2
Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 40/180 (22%)
Query: 51 SSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCG 110
SSS+ +SS +S ++ ++SSG SS S S+G ++ + P
Sbjct: 2535 SSSSSSSSSSSSSSSSSSSSSSG---------SSSSDSEGSSLPVQ----------PEVA 2575
Query: 111 AKR---PSQSAERSAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRD 167
KR P+ + + + PPE T A + SSSS S+ + S
Sbjct: 2576 LKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2635
Query: 168 QPAARTMLAARRQRLGPGRRELLMARSFPDPILARPELHGRWPGPAGTPAPPGASRELRT 227
++ + + + S P P P+ P PA PP R R+
Sbjct: 2636 SSSSSSSSS---------------SSSSPSPAKPGPQ---ALPKPASPKKPPPGERRSRS 2677
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.1 bits (100), Expect = 2e-04
Identities = 64/267 (23%), Positives = 91/267 (34%), Gaps = 35/267 (13%)
Query: 27 ARPGGGSRARPGPGAGPG-----GEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVL 81
A PG G PGPG GPG G + S + A ++G +L +
Sbjct: 170 AGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLP 229
Query: 82 WSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPP------------- 128
+ G+ + GA P P A P+ +A +A PP
Sbjct: 230 KPAAPGTVIQTPPFVGAAAPPAPAAPSPPA-APAPAAPAAAPPPPPPAPATLARPPGHPA 288
Query: 129 -EKTCAPGMKPWC-----GERCSSSSRKPSAGG-----GRDGGVAVSGRDQPAARTMLAA 177
T AP + P G ++ + P+AGG G+ G A + P +
Sbjct: 289 GPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPK 348
Query: 178 RRQRLGPGRRELLMA---RSFPDPILARPELHGRWPGPAGTPAP-PGASRELRTSLWRWV 233
R + P + L A S ++ P + G P PA P P PG L V
Sbjct: 349 RVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAV 408
Query: 234 NLGVWSATAPACGRGTRAGTASSALGP 260
+ S T A G RA + L P
Sbjct: 409 TQSL-SRTPTATTSGIRATLTPTVLAP 434
Score = 40.8 bits (94), Expect = 0.001
Identities = 50/196 (25%), Positives = 68/196 (34%), Gaps = 31/196 (15%)
Query: 27 ARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVS 86
ARPGGG RPGP P ++ + PA+ R A S VP + +
Sbjct: 95 ARPGGGGPQRPGP-PSPRRPLVPAGPAPPAAK--LRPPPEGSAGSCAPVPAAAAV----- 146
Query: 87 GSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGMKPWCGERCSS 146
AGP P GP +P+ A +A + P PG P G+
Sbjct: 147 ----------AAGPEPAPAGP----AKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAG- 191
Query: 147 SSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMARSFPDPILARPELH 206
P A +G A+ AA + GP L + P ++ P
Sbjct: 192 ----PGAAQTLNGSAALLNSHHAAAPAVSLVNN---GPAALLPLPKPAAPGTVIQTPPFV 244
Query: 207 GRWPGPA-GTPAPPGA 221
G PA P+PP A
Sbjct: 245 GAAAPPAPAAPSPPAA 260
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 43.1 bits (100), Expect = 2e-04
Identities = 61/219 (27%), Positives = 82/219 (37%), Gaps = 51/219 (23%)
Query: 22 RSRQ-EARPGGGSRAR-PGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLS 79
R RQ +A PG GS + P PGA P LGR +S A AQ R G
Sbjct: 420 RQRQRDASPGRGSHGQTPSPGALP----LGRQTS---QQPAGPPAQQRPPPQGGPPQ--- 469
Query: 80 VLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSA-----ASSTPPEKTCAP 134
GP P+R GP + P Q + + A S P++ +P
Sbjct: 470 ------------------PGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSP 511
Query: 135 GMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRD-QPAARTMLAARRQR-LGPGRRELLMA 192
P ++ +S + P+ G GR G PAAR + QR GP + +
Sbjct: 512 TSAP---QQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS 568
Query: 193 RSFPDPILARPELHGRWPG-------PAGTPAPPGASRE 224
S P P P+ G PG P P P G +R+
Sbjct: 569 VSGPAP----PKASGAPPGGQQRQGPPQKPPGPAGPTRQ 603
Score = 32.0 bits (71), Expect = 0.56
Identities = 33/130 (25%), Positives = 47/130 (36%), Gaps = 22/130 (16%)
Query: 30 GGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATS-SGSVPVLSVLW------ 82
G G ++RP G GPG R ++P+ + + Q + TS SG P +
Sbjct: 528 GQGRQSRPVAG-GPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQ 586
Query: 83 -----SSVSGSDGKAVRLNGAGPRPKRGGPWC---------GAKRPSQSAERSAASSTPP 128
G G + + AGP P+ G P A RP + + PP
Sbjct: 587 RQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPP 646
Query: 129 EKTCAPGMKP 138
T A G P
Sbjct: 647 PATAAAGGPP 656
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 43.1 bits (100), Expect = 2e-04
Identities = 61/219 (27%), Positives = 82/219 (37%), Gaps = 51/219 (23%)
Query: 22 RSRQ-EARPGGGSRAR-PGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLS 79
R RQ +A PG GS + P PGA P LGR +S A AQ R G
Sbjct: 420 RQRQRDASPGRGSHGQTPSPGALP----LGRQTS---QQPAGPPAQQRPPPQGGPPQ--- 469
Query: 80 VLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSA-----ASSTPPEKTCAP 134
GP P+R GP + P Q + + A S P++ +P
Sbjct: 470 ------------------PGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSP 511
Query: 135 GMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRD-QPAARTMLAARRQR-LGPGRRELLMA 192
P ++ +S + P+ G GR G PAAR + QR GP + +
Sbjct: 512 TSAP---QQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS 568
Query: 193 RSFPDPILARPELHGRWPG-------PAGTPAPPGASRE 224
S P P P+ G PG P P P G +R+
Sbjct: 569 VSGPAP----PKASGAPPGGQQRQGPPQKPPGPAGPTRQ 603
Score = 33.1 bits (74), Expect = 0.25
Identities = 35/143 (24%), Positives = 52/143 (36%), Gaps = 22/143 (15%)
Query: 30 GGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATS-SGSVPVLSVLW------ 82
G G ++RP G GPG R ++P+ + + Q + TS SG P +
Sbjct: 528 GQGRQSRPVAG-GPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQ 586
Query: 83 -----SSVSGSDGKAVRLNGAGPRPKRGGPWC---------GAKRPSQSAERSAASSTPP 128
G G + + AGP P+ G P A RP + + PP
Sbjct: 587 RQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPP 646
Query: 129 EKTCAPGMKPWCGERCSSSSRKP 151
T A G P + S + +P
Sbjct: 647 PATAAAGGPPHPQLKASPAQAQP 669
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 42.7 bits (99), Expect = 3e-04
Identities = 54/215 (25%), Positives = 77/215 (35%), Gaps = 20/215 (9%)
Query: 15 WRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQ---MRKATS 71
WRGS+ S +R G G G G GGE G ++ ASS + R+++ ++ T
Sbjct: 129 WRGSFLKLS--SSRSTRGLVLGEGVGVGAGGEGGGEGAAGAASSLSERSSERVELQSDTD 186
Query: 72 SGSVPVLSVLWSSVSGSD-----GKAVRLNGAGPRPKRGGPWCGAKR--PSQSAERSAAS 124
V + G+A L G RP RG ++R S SA R++A+
Sbjct: 187 DSDTRVAEGARPRPGPTSSRRPWGRAGGLRPRGKRPARGKKRPSSQRRCSSPSAARASAT 246
Query: 125 STPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGP 184
S P + +P + P GG DG + R R LGP
Sbjct: 247 SAPRPTAPSSVAQPSSARSQRRRAPCPHRAGGADGVGSHGARAPGEGSAGSGTERVELGP 306
Query: 185 GRRELLMARSFPDPILARPELHGRWPGPAGTPAPP 219
R + + P LH P PP
Sbjct: 307 HVRPFFLPPTSSSFFGGPPRLH--------VPLPP 333
Score = 35.8 bits (81), Expect = 0.039
Identities = 56/202 (27%), Positives = 67/202 (33%), Gaps = 30/202 (14%)
Query: 31 GGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSDG 90
G R R G G G +V R P +S R A R W S G G
Sbjct: 39 GSKRGRLAAGRGLGAKV--RVVGRPGNSGGRRRAGNRA-------------WGS--GRRG 81
Query: 91 KAVRLNGAGPRPK-RGGPWCGAKRPSQSAERSAASSTPPEKTCAPGMKPWCGERCSSSSR 149
K+ R G GP P GGP C PS R + T G+ W G SS
Sbjct: 82 KSRRSRGPGPWPAGSGGPRC-PSAPSDGVRRCPRLTAHAAVTWV-GVSDWRGSFLKLSSS 139
Query: 150 KPSAG--GGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMARSFPDPIL---ARPE 204
+ + G G GV G A+ R EL D + ARP
Sbjct: 140 RSTRGLVLGEGVGVGAGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPR 199
Query: 205 LHGRWPGPAGTPAPPGASRELR 226
PGP + P G + LR
Sbjct: 200 -----PGPTSSRRPWGRAGGLR 216
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 42.7 bits (99), Expect = 3e-04
Identities = 54/215 (25%), Positives = 77/215 (35%), Gaps = 20/215 (9%)
Query: 15 WRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQ---MRKATS 71
WRGS+ S +R G G G G GGE G ++ ASS + R+++ ++ T
Sbjct: 129 WRGSFLKLS--SSRSTRGLVLGEGVGVGAGGEGGGEGAAGAASSLSERSSERVELQSDTD 186
Query: 72 SGSVPVLSVLWSSVSGSD-----GKAVRLNGAGPRPKRGGPWCGAKR--PSQSAERSAAS 124
V + G+A L G RP RG ++R S SA R++A+
Sbjct: 187 DSDTRVAEGARPRPGPTSSRRPWGRAGGLRPRGKRPARGKKRPSSQRRCSSPSAARASAT 246
Query: 125 STPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGP 184
S P + +P + P GG DG + R R LGP
Sbjct: 247 SAPRPTAPSSVAQPSSARSQRRRAPCPHRAGGADGVGSHGARAPGEGSAGSGTERVELGP 306
Query: 185 GRRELLMARSFPDPILARPELHGRWPGPAGTPAPP 219
R + + P LH P PP
Sbjct: 307 HVRPFFLPPTSSSFFGGPPRLH--------VPLPP 333
Score = 35.8 bits (81), Expect = 0.039
Identities = 56/202 (27%), Positives = 67/202 (33%), Gaps = 30/202 (14%)
Query: 31 GGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSDG 90
G R R G G G +V R P +S R A R W S G G
Sbjct: 39 GSKRGRLAAGRGLGAKV--RVVGRPGNSGGRRRAGNRA-------------WGS--GRRG 81
Query: 91 KAVRLNGAGPRPK-RGGPWCGAKRPSQSAERSAASSTPPEKTCAPGMKPWCGERCSSSSR 149
K+ R G GP P GGP C PS R + T G+ W G SS
Sbjct: 82 KSRRSRGPGPWPAGSGGPRC-PSAPSDGVRRCPRLTAHAAVTWV-GVSDWRGSFLKLSSS 139
Query: 150 KPSAG--GGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMARSFPDPIL---ARPE 204
+ + G G GV G A+ R EL D + ARP
Sbjct: 140 RSTRGLVLGEGVGVGAGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPR 199
Query: 205 LHGRWPGPAGTPAPPGASRELR 226
PGP + P G + LR
Sbjct: 200 -----PGPTSSRRPWGRAGGLR 216
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 42.4 bits (98), Expect = 4e-04
Identities = 44/164 (26%), Positives = 61/164 (37%), Gaps = 26/164 (15%)
Query: 8 WAHSRRKWRGSWRTRSRQEARPGGGSR---------ARPGPGAGPGGEVLGRSSSTPASS 58
W+ SR + R R+RSR GGGSR AR G G GP RS S
Sbjct: 422 WSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRG-GYGPRRRSRSRSHSGDRYR 480
Query: 59 KASRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSA 118
+ R + ++ S S WS R P P + ++ S+S
Sbjct: 481 RGGRGLRHHSSSRSRS------SWSLSPSRSRSLTRSRSHSPSPSQ------SRSRSRSR 528
Query: 119 ERSAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVA 162
+S + S EK P P GE+ +K G++ G A
Sbjct: 529 SQSPSPSPAREKLTRPAASPAVGEKL----KKTEPAAGKETGAA 568
Score = 40.8 bits (94), Expect = 0.001
Identities = 66/239 (27%), Positives = 88/239 (36%), Gaps = 44/239 (18%)
Query: 38 GPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNG 97
GP G RSSS+ +SS ASRT+ R ++ S SS S G R +G
Sbjct: 364 GPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRS----------SSRSRRGGGYYR-SG 412
Query: 98 AGPRPKRGGPWCGAKRPSQSAERS---------AASSTPPEKTCAPGMKPWCGERCSSSS 148
R R W ++ S+ RS S + +P + G R S S
Sbjct: 413 RHAR-SRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRSRS 471
Query: 149 RKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGR-RELLMARSF-PDPILARPELH 206
R S R GG + +R+ + L P R R L +RS P P +R
Sbjct: 472 RSHSGDRYRRGGRGLRHHSSSRSRSSWS-----LSPSRSRSLTRSRSHSPSPSQSRSRSR 526
Query: 207 GRWPGPAGTPA-----PPGASRELRTSLWRWVNLGVWSATAPACGRGTRAGTASSALGP 260
R P+ +PA P AS + L T PA G+ T G A L P
Sbjct: 527 SRSQSPSPSPAREKLTRPAASPAVGEKL---------KKTEPAAGKET--GAAKPKLTP 574
>gi|239753786 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 42.0 bits (97), Expect = 5e-04
Identities = 42/136 (30%), Positives = 51/136 (37%), Gaps = 21/136 (15%)
Query: 16 RGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASS-------------KASR 62
R SW+ R PG RAR PG P + R TPA S +A
Sbjct: 41 RESWKPTHRARESPGNPRRARESPGNQPTQSM--REPRTPAQSTRESWKPTHAEQARAPE 98
Query: 63 TAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSA 122
T Q + S G+ P S S +D + R + PR RG P RP+QS R
Sbjct: 99 TDQRGASESPGNRPTQSTRES--QETDLRRARQSPRNPRRARGSP---GNRPAQST-REP 152
Query: 123 ASSTPPEKTCAPGMKP 138
T E AP P
Sbjct: 153 RKPTNAEHARAPETDP 168
>gi|169167301 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 42.0 bits (97), Expect = 5e-04
Identities = 42/136 (30%), Positives = 51/136 (37%), Gaps = 21/136 (15%)
Query: 16 RGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASS-------------KASR 62
R SW+ R PG RAR PG P + R TPA S +A
Sbjct: 41 RESWKPTHRARESPGNPRRARESPGNQPTQSM--REPRTPAQSTRESWKPTHAEQARAPE 98
Query: 63 TAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSA 122
T Q + S G+ P S S +D + R + PR RG P RP+QS R
Sbjct: 99 TDQRGASESPGNRPTQSTRES--QETDLRRARQSPRNPRRARGSP---GNRPAQST-REP 152
Query: 123 ASSTPPEKTCAPGMKP 138
T E AP P
Sbjct: 153 RKPTNAEHARAPETDP 168
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.0 bits (97), Expect = 5e-04
Identities = 54/211 (25%), Positives = 74/211 (35%), Gaps = 28/211 (13%)
Query: 21 TRSRQEARPGGGSRARPGPGAGPG-----GEVLGRSSSTPASSK-----ASRTAQMRKAT 70
TR+ + G G RA P PG G G + P K A T KAT
Sbjct: 80 TRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKAT 139
Query: 71 SSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEK 130
+ LS + R + G G RP+ SA R + P K
Sbjct: 140 EAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA-RPRPPTEGPRK 198
Query: 131 TCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELL 190
+ + + E ++ R+PSAGG G +PA+R++ ++ P R
Sbjct: 199 SVSSASEHSTTEPSPAARRRPSAGG---------GLQRPASRSLSSSATPLSSPARSG-P 248
Query: 191 MARSFPDPILARPELHGRWPGPAGTPA--PP 219
AR P R H P P G A PP
Sbjct: 249 SARGTP-----RAPAHPSQPKPKGLQALRPP 274
Score = 35.0 bits (79), Expect = 0.066
Identities = 49/206 (23%), Positives = 73/206 (35%), Gaps = 28/206 (13%)
Query: 24 RQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWS 83
R +A+ G +R P A G + R +P A +R ++G+V
Sbjct: 5 RDKAKAGAAART---PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAV-------- 53
Query: 84 SVSGSDGKAVRLNGAGPRP-KRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGMKPWCGE 142
G A R G G P G R S+ PP K +PG P
Sbjct: 54 ---GRKPLAERAGGIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPG--PVSSP 108
Query: 143 RCSSSSRKPSAGGGRDGGVAVSGRDQPA-ARTMLAARRQRLGPGRRELLMARS--FPDPI 199
+S + +P G + G+ +S + A + A +R L G R + P P
Sbjct: 109 GRASGTTRPGPLGQK--GLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA 166
Query: 200 LAR------PELHGRWPGPAGTPAPP 219
+AR E+ P P+ P PP
Sbjct: 167 MARRSRAAGTEVGLPRPAPSARPRPP 192
Score = 28.1 bits (61), Expect = 8.1
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 19 WRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRK----ATSSGS 74
+ T + A P G+ PGP G G + ASS++ + A++ + A +
Sbjct: 668 YETEGPESATPAPGA-LDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASV 726
Query: 75 VPVL---SVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQS 117
V L ++L ++ G+ G +G GP GG G R + S
Sbjct: 727 VQHLLSRTLLLAAAEGAAGG----SGGGPGGAEGGGVTGGARAALS 768
>gi|169166477 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 42.0 bits (97), Expect = 5e-04
Identities = 42/136 (30%), Positives = 51/136 (37%), Gaps = 21/136 (15%)
Query: 16 RGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASS-------------KASR 62
R SW+ R PG RAR PG P + R TPA S +A
Sbjct: 41 RESWKPTHRARESPGNPRRARESPGNQPTQSM--REPRTPAQSTRESWKPTHAEQARAPE 98
Query: 63 TAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSA 122
T Q + S G+ P S S +D + R + PR RG P RP+QS R
Sbjct: 99 TDQRGASESPGNRPTQSTRES--QETDLRRARQSPRNPRRARGSP---GNRPAQST-REP 152
Query: 123 ASSTPPEKTCAPGMKP 138
T E AP P
Sbjct: 153 RKPTNAEHARAPETDP 168
>gi|11761629 fibrinogen, alpha polypeptide isoform alpha
preproprotein [Homo sapiens]
Length = 644
Score = 41.6 bits (96), Expect = 7e-04
Identities = 46/179 (25%), Positives = 61/179 (34%), Gaps = 22/179 (12%)
Query: 17 GSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVP 76
GS R + G + GPG+ + P SS TA + +S P
Sbjct: 280 GSETESPRNPSSAGSWNSGSSGPGS--------TGNRNPGSSGTGGTATWKPGSSG---P 328
Query: 77 VLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGM 136
+ W+S S G N PRP G W P S+ER +A E + +
Sbjct: 329 GSTGSWNSGSSGTGSTGNQNPGSPRPGSTGTW----NPG-SSERGSAGHWTSESSVSGST 383
Query: 137 KPWCGERCSSSSRKPSAGGGR----DGGV--AVSGRDQPAARTMLAARRQRLGPGRREL 189
W E S P +G R D G VSG P R + G +EL
Sbjct: 384 GQWHSESGSFRPDSPGSGNARPNNPDWGTFEEVSGNVSPGTRREYHTEKLVTSKGDKEL 442
>gi|4503689 fibrinogen, alpha polypeptide isoform alpha-E
preproprotein [Homo sapiens]
Length = 866
Score = 41.6 bits (96), Expect = 7e-04
Identities = 46/179 (25%), Positives = 61/179 (34%), Gaps = 22/179 (12%)
Query: 17 GSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVP 76
GS R + G + GPG+ + P SS TA + +S P
Sbjct: 280 GSETESPRNPSSAGSWNSGSSGPGS--------TGNRNPGSSGTGGTATWKPGSSG---P 328
Query: 77 VLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGM 136
+ W+S S G N PRP G W P S+ER +A E + +
Sbjct: 329 GSTGSWNSGSSGTGSTGNQNPGSPRPGSTGTW----NPG-SSERGSAGHWTSESSVSGST 383
Query: 137 KPWCGERCSSSSRKPSAGGGR----DGGV--AVSGRDQPAARTMLAARRQRLGPGRREL 189
W E S P +G R D G VSG P R + G +EL
Sbjct: 384 GQWHSESGSFRPDSPGSGNARPNNPDWGTFEEVSGNVSPGTRREYHTEKLVTSKGDKEL 442
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 41.6 bits (96), Expect = 7e-04
Identities = 38/120 (31%), Positives = 47/120 (39%), Gaps = 14/120 (11%)
Query: 17 GSWRTRSRQ-EARPGGGSRARP-----GPGAGPGGEVLGRSSSTPASSKASRTAQMRKAT 70
G R R+ Q AR GGG+R RP GP A GG R++ P+S+ T +
Sbjct: 48 GPGRVRAAQARARRGGGARERPAEGARGPRAARGG---ARAAPMPSSAPRGPTEPALRRP 104
Query: 71 SSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEK 130
SS P+ SS S R GA P R G R R PPE+
Sbjct: 105 SSAERPLAQAPSSSAS-----VGRAPGAMASPSRSSEATGKPRGRDGRPRREEDDVPPEE 159
>gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens]
Length = 398
Score = 41.6 bits (96), Expect = 7e-04
Identities = 56/182 (30%), Positives = 74/182 (40%), Gaps = 53/182 (29%)
Query: 12 RRKWR-GS---WRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMR 67
R WR GS W S++ GG + + PGA VL RS+ S+ + A R
Sbjct: 134 RSPWRPGSSKVWTPVSKRRCDSGGSATRQGSPGA-----VLPRSAVW--STGPTSPATPR 186
Query: 68 KATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGA--------KRPSQSAE 119
+++SG V S+G A G+GP WC A +RPS S E
Sbjct: 187 PSSASGGF---------VDSSEGSA----GSGPL------WCSAESCLPSTRRRPSLSQE 227
Query: 120 RSAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARR 179
R A + TP PW SSS A GGR G + R QP + +RR
Sbjct: 228 RLAGAGTP---------LPW----ASSSPTSTPALGGRRG--LLRCRSQPCVLSGKRSRR 272
Query: 180 QR 181
+R
Sbjct: 273 KR 274
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 41.2 bits (95), Expect = 0.001
Identities = 64/233 (27%), Positives = 81/233 (34%), Gaps = 38/233 (16%)
Query: 42 GPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPR 101
GP G G S T A + ++ + + A P S W G +A R AG R
Sbjct: 44 GPAGARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAW----GPPARASR--AAGRR 97
Query: 102 PKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGV 161
GP C A P + R+AA+ P A G P ER ++ SAG V
Sbjct: 98 AGPAGPPCRA--PGRG--RAAATRRSPAPGTARG-SPAGVERAGGATAASSAG---TRSV 149
Query: 162 AVSGRDQPAARTMLAARRQRLG-PGRRELLMARS-------FPDPILARPELHGRWPGPA 213
P T L A + L PG L + S P P RP G WP
Sbjct: 150 PARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGF 209
Query: 214 GTPAPPGASREL-----------RTSLWRWVNLGVWSATAPACGRGTRAGTAS 255
APP A+ + + WV +A P C GT AS
Sbjct: 210 AVAAPPAAAASVAPPPPAVAGAPAAAFRGWV-----AAPDPGCTPGTENAPAS 257
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 40.8 bits (94), Expect = 0.001
Identities = 56/199 (28%), Positives = 68/199 (34%), Gaps = 9/199 (4%)
Query: 28 RPGGGSRARPGPG--AGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSV 85
R G GSR PG AGP G R S PA K S R + +P L S
Sbjct: 487 RGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAG--LPGAKGLTGS- 543
Query: 86 SGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGMKPWCGERCS 145
GS G + GP + G P G P + ++ P K A G GER
Sbjct: 544 PGSPGPDGKTGPPGPAGQDGRP--GPPGPPGARGQAGVMGFPGPKGAA-GEPGKAGERGV 600
Query: 146 SSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMARSFPDPILARPEL 205
G+DG G PA + G + L + P +P
Sbjct: 601 PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGE 660
Query: 206 HGRWPGPAGTPAPPGASRE 224
G PG G P P GA E
Sbjct: 661 QGV-PGDLGAPGPSGARGE 678
Score = 34.3 bits (77), Expect = 0.11
Identities = 53/192 (27%), Positives = 64/192 (33%), Gaps = 29/192 (15%)
Query: 32 GSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSDGK 91
G + PGP AGP G ++ P + A A A S P L G G+
Sbjct: 686 GVQGPPGP-AGPRG-----ANGAPGNDGAKGDAGAPGAPGSQGAPGLQ-------GMPGE 732
Query: 92 AVRLNGAGPRPKRG--GPWCGAKRPSQSAERSAASST-PPEKTCAPGMKPWCGERCSSSS 148
GP+ RG GP P + R PP APG K GE S
Sbjct: 733 RGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDK---GESGPSGP 789
Query: 149 RKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMARSFPDPILARPELHGR 208
P+ G G G PA PG A+ P A+ +
Sbjct: 790 AGPTGARGAPGDRGEPGPPGPAGFAG--------PPGADGQPGAKGEPGDAGAKGDAGP- 840
Query: 209 WPGPAGTPAPPG 220
PGPAG PPG
Sbjct: 841 -PGPAGPAGPPG 851
Score = 33.9 bits (76), Expect = 0.15
Identities = 50/202 (24%), Positives = 64/202 (31%), Gaps = 41/202 (20%)
Query: 22 RSRQEARPGGGSRARPGPGAGPG--GEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLS 79
R A G GP PG G V + + P + S Q + P +
Sbjct: 322 RGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGA 381
Query: 80 VLWSSVSGSDGKAVRLNGAGPRPKRGGP-WCGAKRPSQSAERSAASSTPPEKTCAPGMKP 138
+ G+DG+ G G P + GA+ PS P PG K
Sbjct: 382 AGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSG----------PQGPGGPPGPKG 431
Query: 139 WCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMARSFPDP 198
GE + S+ + G G V V G PA G+R
Sbjct: 432 NSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEE-----------GKRG---------- 470
Query: 199 ILARPELHGRWPGPAGTPAPPG 220
AR E PGP G P PPG
Sbjct: 471 --ARGE-----PGPTGLPGPPG 485
Score = 33.9 bits (76), Expect = 0.15
Identities = 56/218 (25%), Positives = 72/218 (33%), Gaps = 43/218 (19%)
Query: 32 GSRARPGPGAGPGGEVLGRSSSTPASSK--------ASRTAQMRKATSSGSVPVLSVLWS 83
G++ PGP AGP GE R PA S A + K G L
Sbjct: 617 GAQGPPGP-AGPAGE---RGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGP 672
Query: 84 SVS-------GSDGKAVRLNGAGPRPKRGGPWC-GAKRPSQSAERSAASSTP-----PEK 130
S + G G AGPR G P GAK + + + P P +
Sbjct: 673 SGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGE 732
Query: 131 TCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGP------ 184
A G+ G+R + + G+DG ++G P + GP
Sbjct: 733 RGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGP 792
Query: 185 -GRRELLMARSFPDPILARPELHGRWPGPAGTPAPPGA 221
G R R P P PGPAG PPGA
Sbjct: 793 TGARGAPGDRGEPGP-----------PGPAGFAGPPGA 819
Score = 30.0 bits (66), Expect = 2.1
Identities = 57/216 (26%), Positives = 65/216 (30%), Gaps = 28/216 (12%)
Query: 24 RQEARPGGGSRARPGPG-----AGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVL 78
+Q G R PGP AGP GE GR + A R G
Sbjct: 984 KQGPSGASGERGPPGPMGPPGLAGPPGES-GREGAPGAEGSPGRDGSPGAKGDRGETGPA 1042
Query: 79 SVLWSSVSGSDGKAVRLNGAGPRPKRG--GPWCGAKRPSQSAERSAASSTPPE----KTC 132
G+ G + AG RG GP A R A P +T
Sbjct: 1043 GP--PGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETG 1100
Query: 133 APGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMA 192
G + G R S + P G G SG PA PG+ L
Sbjct: 1101 EQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPR--GPPGSAGAPGKDGL--- 1155
Query: 193 RSFPDPILARPELHGRW--------PGPAGTPAPPG 220
P PI P GR PGP G P PPG
Sbjct: 1156 NGLPGPI-GPPGPRGRTGDAGPVGPPGPPGPPGPPG 1190
Score = 30.0 bits (66), Expect = 2.1
Identities = 47/200 (23%), Positives = 62/200 (31%), Gaps = 34/200 (17%)
Query: 25 QEARPGG-GSRARPGPGAGPGGE-VLGRSSSTPASSKASRTAQMRKATSSGSV-PVLSVL 81
++ PG G R GP PG G + K+ + A +G V PV
Sbjct: 1026 RDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPV---- 1081
Query: 82 WSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGMKPWCG 141
G+ G A GPR +G R + + PP +PG + G
Sbjct: 1082 -----GARGPA---GPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSG 1133
Query: 142 ERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMARSFPDPILA 201
+ R P G G ++G P R GP P P
Sbjct: 1134 ASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGP--------PGP--- 1182
Query: 202 RPELHGRWPGPAGTPAPPGA 221
PGP G P PP A
Sbjct: 1183 --------PGPPGPPGPPSA 1194
Score = 29.3 bits (64), Expect = 3.6
Identities = 34/136 (25%), Positives = 41/136 (30%), Gaps = 7/136 (5%)
Query: 30 GGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSD 89
G G R GP AG GEV PA K S A P ++G
Sbjct: 906 GKGPRGETGP-AGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGP------QGIAGQR 958
Query: 90 GKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGMKPWCGERCSSSSR 149
G G R G P + Q ++ PP PG+ GE +
Sbjct: 959 GVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAP 1018
Query: 150 KPSAGGGRDGGVAVSG 165
GRDG G
Sbjct: 1019 GAEGSPGRDGSPGAKG 1034
Score = 28.9 bits (63), Expect = 4.7
Identities = 32/143 (22%), Positives = 47/143 (32%), Gaps = 5/143 (3%)
Query: 87 GSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGMKPWCGERCSS 146
G +G ++ G +RG P ++ + + ++ PP T G + G +
Sbjct: 293 GENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAK 352
Query: 147 SSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMARSFPDPILARPELH 206
P G +G V G P A G + + I P
Sbjct: 353 GEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFP 412
Query: 207 G-RWP----GPAGTPAPPGASRE 224
G R P GP G P P G S E
Sbjct: 413 GARGPSGPQGPGGPPGPKGNSGE 435
Score = 28.9 bits (63), Expect = 4.7
Identities = 50/202 (24%), Positives = 68/202 (33%), Gaps = 53/202 (26%)
Query: 32 GSRARPGPG--AGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSD 89
G PGP AGP G + + P + A +A AT G
Sbjct: 836 GDAGPPGPAGPAGPPGPI--GNVGAPGAKGARGSAGPPGAT----------------GFP 877
Query: 90 GKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTP---PEKTCAPGMKPWCGERCSS 146
G A R+ GP G P + + + P P + PG GE+ S
Sbjct: 878 GAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSP 937
Query: 147 SSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLG-PGRRELLMARSFPDPILARPEL 205
+ P+ G G ++G +R +G PG+R R FP
Sbjct: 938 GADGPAGAPGTPGPQGIAG------------QRGVVGLPGQRG---ERGFPG-------- 974
Query: 206 HGRWPGPAGTP---APPGASRE 224
PGP+G P P GAS E
Sbjct: 975 ---LPGPSGEPGKQGPSGASGE 993
Score = 28.1 bits (61), Expect = 8.1
Identities = 46/201 (22%), Positives = 58/201 (28%), Gaps = 52/201 (25%)
Query: 37 PGPGAGPGGEVLGRSS-STPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRL 95
PGP PG + G S S PA +R A + P G G
Sbjct: 772 PGPAGAPGDK--GESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEP 829
Query: 96 NGAGPRPKRGGPW----CGAKRP-----SQSAERSAASSTPPEKTCAPGMKPWCGERCSS 146
AG + G P G P + A+ + S+ PP T PG G S
Sbjct: 830 GDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPS 889
Query: 147 SSRKPSAG---GGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMARSFPDPILARP 203
+ P G++GG G PA R
Sbjct: 890 GNAGPPGPPGPAGKEGGKGPRGETGPAGR------------------------------- 918
Query: 204 ELHGRWPGPAGTPAPPGASRE 224
PG G P PPG + E
Sbjct: 919 ------PGEVGPPGPPGPAGE 933
>gi|239755142 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 40.8 bits (94), Expect = 0.001
Identities = 57/201 (28%), Positives = 71/201 (35%), Gaps = 29/201 (14%)
Query: 12 RRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATS 71
RR RG R R E R G A G GG GR + P S + R+ T
Sbjct: 16 RRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRE----RRETM 71
Query: 72 SGSVPVLSVLWSSVSGS--DGKAVRLNGAGPRPKRG------GPW--CGAKRP---SQSA 118
G WS+ GS A P +RG GP C A+RP A
Sbjct: 72 EGKGG-----WSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGA 126
Query: 119 ERSAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAAR 178
R AA + +P R ++SS P A G D GV + D P + A R
Sbjct: 127 GRLAAGGAEAGERRSPN-------RGATSSLSPIARGAADTGVRSAAEDPPRRDGIAADR 179
Query: 179 RQRLGPGRRELLMARSFPDPI 199
+ GR A P P+
Sbjct: 180 PWQGSWGRLLSHRAAEHPHPV 200
>gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo
sapiens]
Length = 337
Score = 40.8 bits (94), Expect = 0.001
Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 25/180 (13%)
Query: 12 RRKWRGS--WRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQ---M 66
R W S WR S+ R G G GG+ L R +T +K+ + Q
Sbjct: 107 RESWTRSAPWRCLSQDAGRAGSQVCGSSPQTRGGGGKKLQRQKATVMGAKSRKKPQHWGQ 166
Query: 67 RKATSSGSVP-----VLSVLWSSVSGSDGKAVR-LNGAGPRPKRGGP-WCGAKRPSQSAE 119
+ AT+ P + +G +A + G G +P+R P GAK P ++A
Sbjct: 167 KAATAGAKSPGGGGKKPGQEKPAATGEKTRAAKSRGGGGKKPRREKPAAAGAKNPQKAAA 226
Query: 120 RSAASSTPPEKTCAPGMKP-WCGERCSSSSRKPSAGGG------RDGGVAVSGRDQPAAR 172
A A G KP W G++ + + K GGG G + G +P R
Sbjct: 227 AGAKFRE------AGGRKPRWRGQKATEAGAKSRGGGGIKPQKPAAAGAKIHGGKKPRRR 280
>gi|4507917 WEE1 tyrosine kinase isoform 1 [Homo sapiens]
Length = 646
Score = 40.8 bits (94), Expect = 0.001
Identities = 37/117 (31%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 23 SRQEARPGGGSRARPGPGAGPGGEV---LGRSSSTPASSKASRTAQMRKATSSG---SVP 76
+R PG R PGP G GE+ L + P + +A A+ G S P
Sbjct: 65 ARSPTEPGPERRRSPGPAPGSPGELEEDLLLPGACPGADEAGGGAEGDSWEEEGFGSSSP 124
Query: 77 VLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQS--AERSAASSTPPEKT 131
V S GS VR G G RG CGA+R + + R TPP KT
Sbjct: 125 VKSPAAPYFLGSSFSPVRCGGPGDASPRG---CGARRAGEGRRSPRPDHPGTPPHKT 178
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 40.4 bits (93), Expect = 0.002
Identities = 44/172 (25%), Positives = 59/172 (34%), Gaps = 21/172 (12%)
Query: 17 GSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVP 76
GS +S + G GS P P G G G+SSS S + R SGS
Sbjct: 1927 GSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPYESGS-- 1984
Query: 77 VLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGM 136
+G G R R G G Q S SST + A G
Sbjct: 1985 ----------------GHSSGLGHRESRSGQSSGY---GQHGSSSGHSSTHGQHGSASGQ 2025
Query: 137 KPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRE 188
CG+ +SS + S G G SG + + + + + G G R+
Sbjct: 2026 SSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ 2077
Score = 39.7 bits (91), Expect = 0.003
Identities = 43/172 (25%), Positives = 58/172 (33%), Gaps = 21/172 (12%)
Query: 17 GSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVP 76
GS +S + G GS P P G G G+SSS S + R SGS
Sbjct: 1457 GSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGS-- 1514
Query: 77 VLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGM 136
+G G R R G G Q S SST + G
Sbjct: 1515 ----------------SHSSGLGHRESRSGQSSGY---GQHGSSSGHSSTHGQHGSTSGQ 1555
Query: 137 KPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRE 188
CG+ +SS + S G G SG + + + + + G G R+
Sbjct: 1556 SSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ 1607
Score = 39.3 bits (90), Expect = 0.003
Identities = 43/172 (25%), Positives = 58/172 (33%), Gaps = 21/172 (12%)
Query: 17 GSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVP 76
GS +S + G GS P P G G G+SSS S + R SGS
Sbjct: 2397 GSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGS-- 2454
Query: 77 VLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGM 136
+G G R R G G Q S SST + G
Sbjct: 2455 ----------------GHSSGLGHRESRSGQSSGY---GQHGSSSGHSSTHGQHGSTSGQ 2495
Query: 137 KPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRE 188
CG+ +SS + S G G SG + + + + + G G R+
Sbjct: 2496 SSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ 2547
Score = 38.5 bits (88), Expect = 0.006
Identities = 43/172 (25%), Positives = 58/172 (33%), Gaps = 21/172 (12%)
Query: 17 GSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVP 76
GS +S + G GS P P G G G+SSS S + R SGS
Sbjct: 987 GSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRGPYESGS-- 1044
Query: 77 VLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGM 136
+G G R R G G Q S SST + G
Sbjct: 1045 ----------------GHSSGLGHRESRSGQSSGY---GQHGSSSGHSSTHGQHGSTSGQ 1085
Query: 137 KPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRE 188
CG+ +SS + S G G SG + + + + + G G R+
Sbjct: 1086 SSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ 1137
Score = 30.8 bits (68), Expect = 1.2
Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 6/156 (3%)
Query: 2 SGVQSRWAHSRRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKAS 61
SG + H R+ GS +S R G GS G G S S
Sbjct: 288 SGSRQSLGHGRQ---GSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQ 344
Query: 62 RTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERS 121
+ + + SG S S S + + +G G +++ S +
Sbjct: 345 TSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHGSSSRQSSSYGQHE 404
Query: 122 AAS---STPPEKTCAPGMKPWCGERCSSSSRKPSAG 154
+AS S + + G P G+R S S + PS+G
Sbjct: 405 SASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSG 440
Score = 29.6 bits (65), Expect = 2.8
Identities = 40/167 (23%), Positives = 54/167 (32%), Gaps = 21/167 (12%)
Query: 17 GSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRKATSSGSVP 76
GS +S +R G GS P P G +SSS S + R SGS
Sbjct: 521 GSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGS-- 578
Query: 77 VLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPPEKTCAPGM 136
+G G + R G G Q S SST + G
Sbjct: 579 ----------------GHSSGLGHQESRSGQSSGY---GQHGSSSGHSSTHGQHGSTSGQ 619
Query: 137 KPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLG 183
CG+ ++S + S G G S Q + + + R R G
Sbjct: 620 SSSCGQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHG 666
Score = 29.6 bits (65), Expect = 2.8
Identities = 38/161 (23%), Positives = 55/161 (34%), Gaps = 8/161 (4%)
Query: 2 SGVQSRWAHSRRKWRGSWRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKAS 61
+G S + H RGS ++S R G GS P G G S S
Sbjct: 1330 TGQSSSYGH-----RGSGSSQSSGYGRHGAGSGQSPSRGRHGSGSGHSSSYGQHGSGSGW 1384
Query: 62 RTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAG---PRPKRGGPWCGAKRPSQSA 118
++ R + SG SS S G +G+G + G + R +
Sbjct: 1385 SSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHG 1444
Query: 119 ERSAASSTPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDG 159
S +SS+ + G+ S S + PS GR G
Sbjct: 1445 SSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHG 1485
>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 40.4 bits (93), Expect = 0.002
Identities = 41/122 (33%), Positives = 51/122 (41%), Gaps = 22/122 (18%)
Query: 105 GGPWCGAKRPSQSAERSAASS-TPPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAV 163
GGP + Q +R++ S+ PP AP SSSS S+G GG
Sbjct: 18 GGPQAARRSGVQGGQRNSTSARAPPPPPLAP----------SSSSSSGSSGSSGGGGSGS 67
Query: 164 SGRDQPAARTMLA----ARRQRLGPGRRE---LLMARSFPDPILARPELHGRWPGPAGTP 216
+G QP +MLA ARR G R L AR P P+L P PGP G
Sbjct: 68 AG--QPTLGSMLAVGSAARRASERAGGRAGGTALRAREPPPPLLPPPS--PPQPGPKGPA 123
Query: 217 AP 218
+P
Sbjct: 124 SP 125
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 40.0 bits (92), Expect = 0.002
Identities = 58/215 (26%), Positives = 76/215 (35%), Gaps = 32/215 (14%)
Query: 21 TRSRQEA-RP---GGGSRARPGPGAGPG-----GEVLGRSSSTPASSK-----ASRTAQM 66
T SR A RP G G RA P PG G G + P K A T
Sbjct: 85 TSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVAR 144
Query: 67 RKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASST 126
KAT + LS + R + G G RP+ SA R +
Sbjct: 145 GKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA-RPRPPTE 203
Query: 127 PPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGR 186
P K+ + + E ++ R+PSAGG G +PA+R++ ++ P R
Sbjct: 204 GPRKSVSSASEHSTTEPSPAARRRPSAGG---------GLQRPASRSLSSSATPLSSPAR 254
Query: 187 RELLMARSFPDPILARPELHGRWPGPAGTPA--PP 219
AR P R H P P G A PP
Sbjct: 255 SG-PSARGTP-----RAPAHPSQPKPKGLQALRPP 283
Score = 28.1 bits (61), Expect = 8.1
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 19 WRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRK----ATSSGS 74
+ T + A P G+ PGP G G + ASS++ + A++ + A +
Sbjct: 707 YETEGPESATPAPGA-LDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASV 765
Query: 75 VPVL---SVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQS 117
V L ++L ++ G+ G +G GP GG G R + S
Sbjct: 766 VQHLLSRTLLLAAAEGAAGG----SGGGPGGAEGGGVTGGARAALS 807
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 40.0 bits (92), Expect = 0.002
Identities = 58/215 (26%), Positives = 76/215 (35%), Gaps = 32/215 (14%)
Query: 21 TRSRQEA-RP---GGGSRARPGPGAGPG-----GEVLGRSSSTPASSK-----ASRTAQM 66
T SR A RP G G RA P PG G G + P K A T
Sbjct: 85 TSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVAR 144
Query: 67 RKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASST 126
KAT + LS + R + G G RP+ SA R +
Sbjct: 145 GKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA-RPRPPTE 203
Query: 127 PPEKTCAPGMKPWCGERCSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGR 186
P K+ + + E ++ R+PSAGG G +PA+R++ ++ P R
Sbjct: 204 GPRKSVSSASEHSTTEPSPAARRRPSAGG---------GLQRPASRSLSSSATPLSSPAR 254
Query: 187 RELLMARSFPDPILARPELHGRWPGPAGTPA--PP 219
AR P R H P P G A PP
Sbjct: 255 SG-PSARGTP-----RAPAHPSQPKPKGLQALRPP 283
Score = 28.1 bits (61), Expect = 8.1
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 19 WRTRSRQEARPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRK----ATSSGS 74
+ T + A P G+ PGP G G + ASS++ + A++ + A +
Sbjct: 976 YETEGPESATPAPGA-LDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASV 1034
Query: 75 VPVL---SVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQS 117
V L ++L ++ G+ G +G GP GG G R + S
Sbjct: 1035 VQHLLSRTLLLAAAEGAAGG----SGGGPGGAEGGGVTGGARAALS 1076
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 40.0 bits (92), Expect = 0.002
Identities = 72/273 (26%), Positives = 91/273 (33%), Gaps = 41/273 (15%)
Query: 12 RRKWRGSWRTRSRQEA---RPGGGSRARPGPGAGPGGEVLGRSSSTPASSKASRTAQMRK 68
RR+ R R RSR A R G R RP P G RS S SS S + R
Sbjct: 385 RRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSS-----RSLSRARSSSDSGSG--RG 437
Query: 69 ATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSAERSAASSTPP 128
A G P S G G R A RP R P + P R
Sbjct: 438 APGPGPEP------GSERGHGGHGKR---AKERPPRARPASTSPSPGAHGRRGGPEGKSS 488
Query: 129 EKTCAPGMKPWCGERCSSSSRKPSAGG---------------GRDGGVAVSGRDQPAART 173
++ P + W R S SR SA RD R A T
Sbjct: 489 SRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEAT 548
Query: 174 MLAARRQRLGPGRRELLMARSFPDPILARPELHGRWPGPAGTPAPPGASRELRT-----S 228
R + P R+ + SF +P R + P P P+P +S L + S
Sbjct: 549 RARRRSRSYSPIRKRRRDSPSFMEP--RRITSARKRPIPYYRPSPSSSSSCLSSDYSTRS 606
Query: 229 LWRWVNLGVWSATAPACGRGTRAGTASSALGPS 261
R + G + + GTR+ T S + PS
Sbjct: 607 HSRSPSPGHSHGSYSSRSHGTRSRTRSPSRTPS 639
Score = 33.5 bits (75), Expect = 0.19
Identities = 47/207 (22%), Positives = 67/207 (32%), Gaps = 26/207 (12%)
Query: 43 PGGEVLGRSSSTPASSKASRTAQMRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRP 102
P E GR S +S + + + S S LS G P P
Sbjct: 243 PHTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSP 302
Query: 103 KRGGPWCGAKRPSQSAERSAA-------SSTPPEKTCAPGMK------------PWCGER 143
G W +R S +RS A + +PP+K +P + P G+
Sbjct: 303 SGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKE 362
Query: 144 CSSSSRKPSAGGGRDGGVAVSGRDQPAARTMLAARRQRLGPGRRELLMARSFPDPILARP 203
S PS+ G +GR + R +R P RR R P +R
Sbjct: 363 SPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRS 422
Query: 204 ELHGRWPGPAGT----PAP---PGASR 223
R +G+ P P PG+ R
Sbjct: 423 LSRARSSSDSGSGRGAPGPGPEPGSER 449
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,882,065
Number of Sequences: 37866
Number of extensions: 854020
Number of successful extensions: 7494
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 618
Number of HSP's that attempted gapping in prelim test: 5943
Number of HSP's gapped (non-prelim): 1883
length of query: 261
length of database: 18,247,518
effective HSP length: 100
effective length of query: 161
effective length of database: 14,460,918
effective search space: 2328207798
effective search space used: 2328207798
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.