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Search of human proteins with 239751211
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751211 PREDICTED: hypothetical protein XP_002347748 [Homo
sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756716 PREDICTED: hypothetical protein XP_002345022 [Homo ... 427 e-120
gi|239751211 PREDICTED: hypothetical protein XP_002347748 [Homo ... 427 e-120
gi|239745701 PREDICTED: hypothetical protein XP_002343519 [Homo ... 298 2e-81
gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens] 40 0.001
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 39 0.002
gi|119508426 alpha 3 type IX collagen [Homo sapiens] 38 0.007
gi|55956899 keratin 9 [Homo sapiens] 37 0.009
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 37 0.016
gi|119220598 apolipoprotein B48 receptor [Homo sapiens] 36 0.020
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 36 0.027
gi|57864582 hornerin [Homo sapiens] 35 0.035
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 35 0.035
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 35 0.035
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 35 0.035
gi|119395750 keratin 1 [Homo sapiens] 35 0.045
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 35 0.059
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] 35 0.059
gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo ... 35 0.059
gi|4507205 serum response factor (c-fos serum response element-b... 34 0.10
gi|47132620 keratin 2 [Homo sapiens] 34 0.10
gi|195972866 keratin 10 [Homo sapiens] 33 0.13
gi|239749709 PREDICTED: hypothetical protein [Homo sapiens] 33 0.17
gi|109255251 loricrin [Homo sapiens] 33 0.17
gi|34486092 adenylate cyclase 5 [Homo sapiens] 33 0.17
gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens] 33 0.22
gi|182765442 homeobox A10 isoform a [Homo sapiens] 33 0.22
gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Ho... 33 0.22
gi|153791670 keratin 76 [Homo sapiens] 32 0.29
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 32 0.29
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 32 0.29
>gi|239756716 PREDICTED: hypothetical protein XP_002345022 [Homo
sapiens]
Length = 208
Score = 427 bits (1099), Expect = e-120
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MGSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKR 60
MGSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKR
Sbjct: 1 MGSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKR 60
Query: 61 AGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGF 120
AGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGF
Sbjct: 61 AGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGF 120
Query: 121 CVGGVAAGRDWADIFLCALQRSEVLCWSHPLRRREGKRKTLSAPQGGSSLRTLPFRIIFS 180
CVGGVAAGRDWADIFLCALQRSEVLCWSHPLRRREGKRKTLSAPQGGSSLRTLPFRIIFS
Sbjct: 121 CVGGVAAGRDWADIFLCALQRSEVLCWSHPLRRREGKRKTLSAPQGGSSLRTLPFRIIFS 180
Query: 181 LLFLPSRFLEPLTPGDEEVLARSLLSCV 208
LLFLPSRFLEPLTPGDEEVLARSLLSCV
Sbjct: 181 LLFLPSRFLEPLTPGDEEVLARSLLSCV 208
>gi|239751211 PREDICTED: hypothetical protein XP_002347748 [Homo
sapiens]
Length = 208
Score = 427 bits (1099), Expect = e-120
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MGSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKR 60
MGSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKR
Sbjct: 1 MGSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKR 60
Query: 61 AGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGF 120
AGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGF
Sbjct: 61 AGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGF 120
Query: 121 CVGGVAAGRDWADIFLCALQRSEVLCWSHPLRRREGKRKTLSAPQGGSSLRTLPFRIIFS 180
CVGGVAAGRDWADIFLCALQRSEVLCWSHPLRRREGKRKTLSAPQGGSSLRTLPFRIIFS
Sbjct: 121 CVGGVAAGRDWADIFLCALQRSEVLCWSHPLRRREGKRKTLSAPQGGSSLRTLPFRIIFS 180
Query: 181 LLFLPSRFLEPLTPGDEEVLARSLLSCV 208
LLFLPSRFLEPLTPGDEEVLARSLLSCV
Sbjct: 181 LLFLPSRFLEPLTPGDEEVLARSLLSCV 208
>gi|239745701 PREDICTED: hypothetical protein XP_002343519 [Homo
sapiens]
Length = 159
Score = 298 bits (764), Expect = 2e-81
Identities = 143/143 (100%), Positives = 143/143 (100%)
Query: 1 MGSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKR 60
MGSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKR
Sbjct: 1 MGSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKR 60
Query: 61 AGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGF 120
AGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGF
Sbjct: 61 AGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGF 120
Query: 121 CVGGVAAGRDWADIFLCALQRSE 143
CVGGVAAGRDWADIFLCALQRSE
Sbjct: 121 CVGGVAAGRDWADIFLCALQRSE 143
>gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]
Length = 1714
Score = 40.0 bits (92), Expect = 0.001
Identities = 43/121 (35%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 2 GSRGVQGDP--DGLGGGTGDRGAGSGEAERRDTGLGVGV-----LEGESGEVWESRLALE 54
G RG QG P GL G TGDRG GE R VG +EG G ES L E
Sbjct: 966 GERGFQGKPGLQGLPGSTGDRGL-PGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGE 1024
Query: 55 AEGGKRAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGR 114
G K G + GG+ + G+ GA E G++ L G PG +G +G
Sbjct: 1025 -PGAKGDVGTAGSVGGTGEPGLRGEPGAPGE--EGLQGKDGLKGVPGGRGLPGEDGEKGE 1081
Query: 115 M 115
M
Sbjct: 1082 M 1082
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 39.3 bits (90), Expect = 0.002
Identities = 42/146 (28%), Positives = 57/146 (39%), Gaps = 23/146 (15%)
Query: 8 GDPDGLGGGTGDR--------GAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGK 59
G D GGG+ R G+ +G + G +G + SG W A +A GG
Sbjct: 1398 GTSDQSGGGSKPRFEDQASGEGSWAGAGGQASGGSMLGPEDQSSGRSWADT-ADQASGGS 1456
Query: 60 RAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAA-------LEREGGR 112
R G + ++GG+ + G S + EE W G G A ++ GR
Sbjct: 1457 RLGHVDQSSGGAWAGTLDQSGGGSKPRFENQTTEEGSWAGAGGQAGGGSKVGPEDQSSGR 1516
Query: 113 -----GRMIRGGFCVGGV--AAGRDW 131
G I GGF VG V A G W
Sbjct: 1517 SWANSGDQISGGFLVGIVDQANGGSW 1542
Score = 34.7 bits (78), Expect = 0.059
Identities = 33/99 (33%), Positives = 37/99 (37%), Gaps = 12/99 (12%)
Query: 16 GTGDRGAGSGEAERRDTGLGVGVLEGE----SGEVWE-SRLALEAEGGKRAGGLRDAAGG 70
G GD+ + E D G G G SGE W SR EA GG R G A GG
Sbjct: 1741 GPGDQAVDCSKPEFEDQACGGGSWAGAGSQASGESWAGSRPGNEAIGGSRMGSEDQATGG 1800
Query: 71 SQKMGVHIGVG---ASLEFRGSSCGEEPLWGGPGDWAAL 106
S G S E + E W GPG A +
Sbjct: 1801 SWARSEDQASGRFQVSFEVEAN----EGFWFGPGAEAVI 1835
Score = 31.6 bits (70), Expect = 0.50
Identities = 40/138 (28%), Positives = 49/138 (35%), Gaps = 27/138 (19%)
Query: 12 GLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAGGLRDAAGGS 71
G G GD+ G D G+G G+V GG R G ++GGS
Sbjct: 1676 GFWPGAGDQTGGGSRPGSEDQSSGIGSWGVAGGQVL---------GGARPGPADQSSGGS 1726
Query: 72 ------QKMG-VHIGVG------ASLEFRGSSCGEEPLWGGPGDWAALEREGGR--GRMI 116
Q G IG G + EF +CG W G G A+ E G G
Sbjct: 1727 WAGTGNQSSGRSWIGPGDQAVDCSKPEFEDQACGGGS-WAGAGSQASGESWAGSRPGNEA 1785
Query: 117 RGGFCVGG--VAAGRDWA 132
GG +G A G WA
Sbjct: 1786 IGGSRMGSEDQATGGSWA 1803
Score = 28.9 bits (63), Expect = 3.2
Identities = 29/115 (25%), Positives = 40/115 (34%), Gaps = 25/115 (21%)
Query: 21 GAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAGGLRDAAGGSQKMGVHIGV 80
G+ +G + G G G V ++ GG G D +GG
Sbjct: 1356 GSWTGAENQASEGSWAGAGAGNMSSVSYWAGVVDQAGGGSWAGTSDQSGG---------- 1405
Query: 81 GASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGFCVG--GVAAGRDWAD 133
G+ F + GE G WA G G GG +G ++GR WAD
Sbjct: 1406 GSKPRFEDQASGE-------GSWA------GAGGQASGGSMLGPEDQSSGRSWAD 1447
Score = 27.3 bits (59), Expect = 9.4
Identities = 38/153 (24%), Positives = 54/153 (35%), Gaps = 27/153 (17%)
Query: 5 GVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEG-ESGE-VW---------ESRLAL 53
G + G + GAG+G + G G G G ESG VW ESRL
Sbjct: 1900 GAEAGAGAEAGAGAEAGAGAGAEAGAEAGAGAGAGPGTESGAGVWSWDGDATTVESRLGA 1959
Query: 54 EAEGGKRAGGL----------RDAAGGSQKMGVHIGVGASLE----FRGSSCGEEPLWGG 99
E G + L R+++ +++ + A E FR S + G
Sbjct: 1960 GEEAGVESWTLARNVGEDELSRESSPDIEEISLRSLFWAESENSNTFRSKSGKDASFESG 2019
Query: 100 PGDWAALER--EGGRGRMIRGGFCVGGVAAGRD 130
GD +++ E G I FC G D
Sbjct: 2020 AGDNTSIKDKFEAAGGVDIGSWFCAGNENTSED 2052
>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
Length = 684
Score = 37.7 bits (86), Expect = 0.007
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 1 MGSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGL-GVGVLEGESGEVWESRLALEAEGGK 59
MG G+ G P GL G GDRG G + D G+ G L G+ GE+ S L G K
Sbjct: 411 MGDPGLPG-PQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLV----GPK 465
Query: 60 RAGGLRDAAGGSQKMG 75
G R G G
Sbjct: 466 GESGSRGELGPKGTQG 481
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 37.4 bits (85), Expect = 0.009
Identities = 41/127 (32%), Positives = 49/127 (38%), Gaps = 23/127 (18%)
Query: 2 GSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRA 61
GS G G G GGG+G RG GSG + +G G G G G GG +
Sbjct: 495 GSYGGGGSGGGYGGGSGSRG-GSGGSYGGGSGSGGGSGGGYGG----------GSGGGHS 543
Query: 62 GGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGFC 121
GG G S G + G G+ GS G +GG GG G GG
Sbjct: 544 GG--SGGGHSGGSGGNYGGGS-----GSGGGSGGGYGGGSG-----SRGGSGGSHGGGSG 591
Query: 122 VGGVAAG 128
GG + G
Sbjct: 592 FGGESGG 598
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 36.6 bits (83), Expect = 0.016
Identities = 39/114 (34%), Positives = 45/114 (39%), Gaps = 24/114 (21%)
Query: 2 GSRGVQGDPDGL------GGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEA 55
GS G + P G GGG DRG EAE R T G E E G
Sbjct: 43 GSEGAEEAPRGAAAVKEAGGGGPDRGP---EAEARGTRGAHGETEAEEGA---------P 90
Query: 56 EGGKRAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALERE 109
EG + G + +G Q G G GA E RG + E P D AA ER+
Sbjct: 91 EGAEVPQGGEETSGAQQVEGASPGRGAQGEPRGEAQRE------PEDSAAPERQ 138
>gi|119220598 apolipoprotein B48 receptor [Homo sapiens]
Length = 1088
Score = 36.2 bits (82), Expect = 0.020
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 8 GDPDGLGGGTGDRGAG--SGEAERRDTGLGVG-VLEGESGEVWESRLALEAEGGKRAGGL 64
G PD TG AG G+ + G G LEG G+ W+S+ EA G+ AGG
Sbjct: 739 GLPDREDAQTGSVAAGIMGGDVVPHISAAGAGEALEGVLGQGWDSKEKEEAAAGEHAGGQ 798
Query: 65 RDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGG 99
GS + V G G+ +E S G WGG
Sbjct: 799 EFGLEGSAEEEV-TGRGSQVEAFESREGGP--WGG 830
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 35.8 bits (81), Expect = 0.027
Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 4 RGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAGG 63
+G + +G G G+ G G GE E G G G EGE E E G+ G
Sbjct: 857 KGEEEGEEGEGEEEGEEGEGEGEEEE---GEGEGEEEGEGEGEEEEGEGEGEEEGEGEGE 913
Query: 64 LRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGG---PGDWAALEREG 110
+ G ++ G G G E G GE+ G G+W E EG
Sbjct: 914 EEEGEGKGEEEGEE-GEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEG 962
Score = 34.7 bits (78), Expect = 0.059
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
Query: 16 GTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAG---GLRDAAGGSQ 72
G G+ G GE E G G G EGE GE E E EG + G G + G +
Sbjct: 840 GEGEEEEGEGEEEE---GEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGE 896
Query: 73 K-----MGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREG 110
+ G G G E G GEE G G+ E EG
Sbjct: 897 EEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEG 939
Score = 31.2 bits (69), Expect = 0.65
Identities = 34/116 (29%), Positives = 43/116 (37%), Gaps = 12/116 (10%)
Query: 7 QGDPDGLGGGTGDRGAGSGEAE-------RRDTGLGVGVLEGESGEVWESRLALEAEGGK 59
+G+ + G G G+ G GE E + G G G EGE GE E EG
Sbjct: 884 EGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGED 943
Query: 60 RAGGLRDAAG---GSQKMGVHIG--VGASLEFRGSSCGEEPLWGGPGDWAALEREG 110
G + G G ++ G G G G GEE G G+ E EG
Sbjct: 944 GEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEG 999
Score = 30.4 bits (67), Expect = 1.1
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Query: 5 GVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGE-VWESRLALEAEGGKRAGG 63
G + + +G G G+ G G GE E + G EGE E WE E EG G
Sbjct: 912 GEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGE-EEEGEGEGEEEG 970
Query: 64 LRDAAGGSQKMGVHIGVGASLEFRGSSCGEE 94
+ G + G G E G GEE
Sbjct: 971 EGEGEEGEGEGEEEEGEGEGEEEEGEEEGEE 1001
Score = 27.7 bits (60), Expect = 7.2
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 5 GVQGDPDGL---GGGTGDRGAGSGEAE------RRDTGLGVGVLEGESGEVWESRLALEA 55
G +G+ +G G G G+ G G GE E + G G G EGE GE E E
Sbjct: 925 GEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGE-GEGEEG----EG 979
Query: 56 EGGKRAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEE 94
EG + G ++ G G G E G GEE
Sbjct: 980 EGEEEEGEGEGEEEEGEEEGEEEGEG---EEEGEGEGEE 1015
Score = 27.7 bits (60), Expect = 7.2
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 5 GVQGDPDGL---GGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRA 61
G +G+ +G G G G+ G E E G G EGE E E +E E G+
Sbjct: 974 GEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGE 1033
Query: 62 G 62
G
Sbjct: 1034 G 1034
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 35.4 bits (80), Expect = 0.035
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 4 RGVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGE--SGEVWESRLALEAEGG 58
RG G G G G RG+GSG++ R +G G G SG S ++ G
Sbjct: 880 RGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSG 939
Query: 59 KRAGGLRDAAGGS-----QKMGVHIGVGASLEFRGSSCGEEPLWGGPG 101
+ +G + +G ++ G G + E GSS G +G G
Sbjct: 940 QSSGYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSSGSSSSYGQHG 987
Score = 33.1 bits (74), Expect = 0.17
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 5/116 (4%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAG 62
SRG G G G G+GSG + G + G+S + ++ G + G
Sbjct: 661 SRGRHGSDFGHSSSYGQHGSGSGWSSSNGPH---GSVSGQSSGFGHKSGSGQSSGYSQHG 717
Query: 63 GLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRG 118
+ G +K G G + E GSS G +G G + + G GR G
Sbjct: 718 SGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHG--SGSHQSSGHGRQGSG 771
Score = 31.6 bits (70), Expect = 0.50
Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 11/109 (10%)
Query: 4 RGVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGE--SGEVWESRLALEAEGG 58
RG G G G RG+GSG++ + TG G G SG + S
Sbjct: 413 RGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSS 472
Query: 59 KRAGGLRDAAGGS------QKMGVHIGVGASLEFRGSSCGEEPLWGGPG 101
+ + G GS + G G + E +GSS G +G G
Sbjct: 473 EHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHG 521
Score = 31.2 bits (69), Expect = 0.65
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 24/132 (18%)
Query: 5 GVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGESGE---------VWESRLA 52
G G G G +G+GSG++ R +GLG G+ G +ESRL
Sbjct: 2630 GQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRLG 2689
Query: 53 LEAEGGKRAGGLRDAAGGSQ------------KMGVHIGVGASLEFRGSSCGEEPLWGGP 100
+ G+ G ++ SQ + G G ++ + GSS G+ +G
Sbjct: 2690 HSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHR 2749
Query: 101 GDWAALEREGGR 112
G ++ GR
Sbjct: 2750 GSGSSQSSGYGR 2761
Score = 30.8 bits (68), Expect = 0.85
Identities = 28/102 (27%), Positives = 39/102 (38%), Gaps = 11/102 (10%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGE--SGEVWESRLALEAEG 57
S G +G G G GAGSG++ R +G G G+ SG W S G
Sbjct: 1335 SYGHRGSGSSQSSGYGRHGAGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSG 1394
Query: 58 GKRAGGLRD------AAGGSQKMGVHIGVGASLEFRGSSCGE 93
++ G + G + G G +S E GS G+
Sbjct: 1395 SGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQ 1436
Score = 30.0 bits (66), Expect = 1.5
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 4 RGVQGDPDGLGGGTGDRGAGSGEAERRDT-GLGVGVLEGESGEVWESRLALEAEGGKRAG 62
RG G G G G+GSG++ DT G G G G S S ++ G + G
Sbjct: 192 RGQCGSGSGQSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSG---QSSGYSQHG 248
Query: 63 GLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGR 112
+ G + G G + E SS G +G G + GR
Sbjct: 249 SGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGR 298
Score = 28.9 bits (63), Expect = 3.2
Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 5 GVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGESGEVWESRLAL---EAEGG 58
G QG G G G RG+GS ++ R +G G G+ G E+ G
Sbjct: 1116 GRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1175
Query: 59 KRAGGLRDAAG-----GSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRG 113
+ + + +G G + G G + E GSS G +G G + + G G
Sbjct: 1176 QSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHG--SGSRQSSGHG 1233
Query: 114 RMIRG 118
R G
Sbjct: 1234 RQGSG 1238
Score = 28.9 bits (63), Expect = 3.2
Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 11/102 (10%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGE--SGEVWESRLALEAEG 57
S G G G +G+GSG++ R +G G G+ SG W S G
Sbjct: 1805 SHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSG 1864
Query: 58 GKRAGGLRD------AAGGSQKMGVHIGVGASLEFRGSSCGE 93
++ G + G + G G +S E GS G+
Sbjct: 1865 SGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQ 1906
Score = 28.9 bits (63), Expect = 3.2
Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 5 GVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGESGEVWESRLAL---EAEGG 58
G QG G G G RG+GS ++ R +G G G+ G E+ G
Sbjct: 2056 GRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSG 2115
Query: 59 KRAGGLRDAAG-----GSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRG 113
+ + + +G G + G G + E GSS G +G G + + G G
Sbjct: 2116 QSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHG--SGSRQSSGHG 2173
Query: 114 RMIRG 118
R G
Sbjct: 2174 RQGSG 2178
Score = 28.9 bits (63), Expect = 3.2
Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 11/102 (10%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGE--SGEVWESRLALEAEG 57
S G G G +G+GSG++ R +G G G+ SG W S G
Sbjct: 2275 SHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSG 2334
Query: 58 GKRAGGLRD------AAGGSQKMGVHIGVGASLEFRGSSCGE 93
++ G + G + G G +S E GS G+
Sbjct: 2335 SGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQ 2376
Score = 28.9 bits (63), Expect = 3.2
Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 5 GVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGESGEVWESRLAL---EAEGG 58
G QG G G G RG+GS ++ R +G G G+ G E+ G
Sbjct: 2526 GRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 2585
Query: 59 KRAGGLRDAAG-----GSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRG 113
+ + + +G G + G G + E GSS G +G G + + G G
Sbjct: 2586 QSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHG--SGSRQSSGHG 2643
Query: 114 RMIRG 118
R G
Sbjct: 2644 RQGSG 2648
Score = 28.1 bits (61), Expect = 5.5
Identities = 31/127 (24%), Positives = 43/127 (33%), Gaps = 12/127 (9%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAG 62
SRG G G G G+GSG + R ESG S L ++
Sbjct: 1950 SRGRHGSGSGQSSSYGPYGSGSGWSSSRG--------PYESGSGHSSGLGHRESRSGQSS 2001
Query: 63 GLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGFCV 122
G S H G S + SSCG+ G ++ + G G G+
Sbjct: 2002 GYGQHGSSSGHSSTH-GQHGSASGQSSSCGQH---GASSGQSSSHGQHGSGSSQSSGYGR 2057
Query: 123 GGVAAGR 129
G +G+
Sbjct: 2058 QGSGSGQ 2064
Score = 27.7 bits (60), Expect = 7.2
Identities = 29/116 (25%), Positives = 40/116 (34%), Gaps = 14/116 (12%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAG 62
SRG G G G G+GSG + R G E SG S G +
Sbjct: 1244 SRGRHGSGLGHSSSHGQHGSGSGRSSSR------GPYESRSGH--SSVFGQHESGSGHSS 1295
Query: 63 GLRDAAGGS------QKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGR 112
GS + G G ++ + GSS G+ +G G ++ GR
Sbjct: 1296 AYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGR 1351
Score = 27.3 bits (59), Expect = 9.4
Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 14/116 (12%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGESGEVWESRLALEAEGGK 59
S G G G G +G+GSG++ +R +G G G S + G+
Sbjct: 1101 SHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHG----SGSGRSSSSGQ 1156
Query: 60 RAGGLRDAAGGSQKMGVH---IGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGR 112
GL +++G G H G +S GS G +G G + G R
Sbjct: 1157 HGSGLGESSG----FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGER 1208
Score = 27.3 bits (59), Expect = 9.4
Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 14/116 (12%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGESGEVWESRLALEAEGGK 59
S G G G G +G+GSG++ +R +G G G S + G+
Sbjct: 1571 SHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHG----SGSGRSSSSGQ 1626
Query: 60 RAGGLRDAAGGSQKMGVH---IGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGR 112
GL +++G G H G +S GS G +G G + G R
Sbjct: 1627 HGSGLGESSG----FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGER 1678
Score = 27.3 bits (59), Expect = 9.4
Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 14/116 (12%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAE---RRDTGLGVGVLEGESGEVWESRLALEAEGGK 59
S G G G G +G+GSG++ +R +G G G S + G+
Sbjct: 2511 SHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHG----SGSGRSSSSGQ 2566
Query: 60 RAGGLRDAAGGSQKMGVH---IGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGR 112
GL +++G G H G +S GS G +G G + G R
Sbjct: 2567 HGSGLGESSG----FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGER 2618
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 35.4 bits (80), Expect = 0.035
Identities = 45/165 (27%), Positives = 58/165 (35%), Gaps = 28/165 (16%)
Query: 2 GSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALE------- 54
G GV G G+GGG DR +G A R + G L G G + LA+
Sbjct: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGP 93
Query: 55 --------------AEGGKRAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGP 100
GG L AA G GV +GVG ++ G C GP
Sbjct: 94 RPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGV-GGCC------SGP 146
Query: 101 GDWAALEREGGRGRMIRGGFCVGGVAAGRDWADIFLCALQRSEVL 145
G + G G + G V AG + D + A R E +
Sbjct: 147 GHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAARIEAM 191
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 35.4 bits (80), Expect = 0.035
Identities = 45/165 (27%), Positives = 58/165 (35%), Gaps = 28/165 (16%)
Query: 2 GSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALE------- 54
G GV G G+GGG DR +G A R + G L G G + LA+
Sbjct: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGP 93
Query: 55 --------------AEGGKRAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGP 100
GG L AA G GV +GVG ++ G C GP
Sbjct: 94 RPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGV-GGCC------SGP 146
Query: 101 GDWAALEREGGRGRMIRGGFCVGGVAAGRDWADIFLCALQRSEVL 145
G + G G + G V AG + D + A R E +
Sbjct: 147 GHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAARIEAM 191
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 35.4 bits (80), Expect = 0.035
Identities = 45/165 (27%), Positives = 58/165 (35%), Gaps = 28/165 (16%)
Query: 2 GSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALE------- 54
G GV G G+GGG DR +G A R + G L G G + LA+
Sbjct: 34 GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGP 93
Query: 55 --------------AEGGKRAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGP 100
GG L AA G GV +GVG ++ G C GP
Sbjct: 94 RPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGV-GGCC------SGP 146
Query: 101 GDWAALEREGGRGRMIRGGFCVGGVAAGRDWADIFLCALQRSEVL 145
G + G G + G V AG + D + A R E +
Sbjct: 147 GHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAARIEAM 191
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 35.0 bits (79), Expect = 0.045
Identities = 32/98 (32%), Positives = 37/98 (37%), Gaps = 19/98 (19%)
Query: 2 GSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRA 61
GS G G G GGG+ G G G +G G G SG GG +
Sbjct: 550 GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSG-----------GGGGGS 598
Query: 62 GGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGG 99
G R + GGS G S+ RGSS G GG
Sbjct: 599 SGGRGSGGGSS--------GGSIGGRGSSSGGVKSSGG 628
Score = 31.2 bits (69), Expect = 0.65
Identities = 39/126 (30%), Positives = 42/126 (33%), Gaps = 22/126 (17%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAG 62
S G G GGG G GAG G R LG +S A GG R
Sbjct: 39 SGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGS----------KSISISVARGGGRGS 88
Query: 63 GLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGFCV 122
G GG G G G F G G GG G + + G G GGF
Sbjct: 89 GFGGGYGGGGFGGGGFGGGG---FGGGGIG----GGGFGGFGS-----GGGGFGGGGFGG 136
Query: 123 GGVAAG 128
GG G
Sbjct: 137 GGYGGG 142
Score = 29.6 bits (65), Expect = 1.9
Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 27/128 (21%)
Query: 2 GSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRA 61
GSRG G G GG + G GS +G G G G G S
Sbjct: 516 GSRGGGGGGYGSGGSSYGSGGGS-----YGSGGGGGGGRGSYGSGGSSY--------GSG 562
Query: 62 GGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGFC 121
GG + GG G + +S +RG S G GG G GGRG GG
Sbjct: 563 GGSYGSGGGGGGHGSYGSGSSSGGYRGGSGG-----GGGGS------SGGRG---SGGGS 608
Query: 122 VGGVAAGR 129
GG GR
Sbjct: 609 SGGSIGGR 616
>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
sapiens]
Length = 600
Score = 34.7 bits (78), Expect = 0.059
Identities = 35/120 (29%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 2 GSRGVQGDPDGLGGGTGDRGAGSGEAE-------RRDTGLGVGVLEGESGEVWESRLALE 54
G G QG + G G R G G E R G+G G E +A+
Sbjct: 273 GRAGGQGGDFAVQGPRGRRHGGQGGGEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVAVH 332
Query: 55 AEGGKRAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGR 114
GG R GG R H+ VG + + S G GG +E +GGRGR
Sbjct: 333 RAGGCRRGGGRRCG--------HVRVG--VREQASERGHGQALGGQDVLLEVEGQGGRGR 382
>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 510
Score = 34.7 bits (78), Expect = 0.059
Identities = 35/120 (29%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 2 GSRGVQGDPDGLGGGTGDRGAGSGEAE-------RRDTGLGVGVLEGESGEVWESRLALE 54
G G QG + G G R G G E R G+G G E +A+
Sbjct: 130 GRAGGQGGDFAVQGPRGRRHGGQGGGEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVAVH 189
Query: 55 AEGGKRAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGR 114
GG R GG R H+ VG + + S G GG +E +GGRGR
Sbjct: 190 RAGGCRRGGGRRCG--------HVRVG--VREQASERGHGQALGGQDVLLEVEGQGGRGR 239
>gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo
sapiens]
Length = 457
Score = 34.7 bits (78), Expect = 0.059
Identities = 35/120 (29%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 2 GSRGVQGDPDGLGGGTGDRGAGSGEAE-------RRDTGLGVGVLEGESGEVWESRLALE 54
G G QG + G G R G G E R G+G G E +A+
Sbjct: 130 GRAGGQGGDFAVQGPRGRRHGGQGGGEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVAVH 189
Query: 55 AEGGKRAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGR 114
GG R GG R H+ VG + + S G GG +E +GGRGR
Sbjct: 190 RAGGCRRGGGRRCG--------HVRVG--VREQASERGHGQALGGQDVLLEVEGQGGRGR 239
>gi|4507205 serum response factor (c-fos serum response
element-binding transcription factor) [Homo sapiens]
Length = 508
Score = 33.9 bits (76), Expect = 0.10
Identities = 32/103 (31%), Positives = 38/103 (36%), Gaps = 11/103 (10%)
Query: 14 GGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAGGLRDAAGGSQK 73
GGG G RGA G GLG G LE E+ A AG L + G +
Sbjct: 31 GGGGGTRGANGGRVPGNGAGLGPGRLEREAA------AAAATTPAPTAGALYSGSEGDSE 84
Query: 74 MGVHIGVGASLEFRGSSCGEEPLW---GGPGDWAALEREGGRG 113
G +GA S E + GGP A+ GG G
Sbjct: 85 SGEEEELGAERRGLKRSLSEMEIGMVVGGPE--ASAAATGGYG 125
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 33.9 bits (76), Expect = 0.10
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 20/111 (18%)
Query: 14 GGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAGGLRDAAGGSQK 73
GGG G RG SG A V+ G S S L GG GG GS+
Sbjct: 14 GGGGGFRGFSSGSA----------VVSGGSRRSTSSFSCLSRHGGG-GGGFGGGGFGSRS 62
Query: 74 MGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGFCVGG 124
+ +G+G + S G G G + A GGRG GG GG
Sbjct: 63 L---VGLGGTKSISISVAG------GGGGFGAAGGFGGRGGGFGGGSSFGG 104
Score = 32.3 bits (72), Expect = 0.29
Identities = 27/89 (30%), Positives = 32/89 (35%), Gaps = 9/89 (10%)
Query: 2 GSRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRA 61
GSRG G + GG G GSG G G + G + GGK +
Sbjct: 547 GSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGG---------GYGSGGGKHS 597
Query: 62 GGLRDAAGGSQKMGVHIGVGASLEFRGSS 90
G G S G G G S +GSS
Sbjct: 598 SGGGSRGGSSSGGGYGSGGGGSSSVKGSS 626
Score = 28.1 bits (61), Expect = 5.5
Identities = 32/114 (28%), Positives = 38/114 (33%), Gaps = 26/114 (22%)
Query: 15 GGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAGGLRDAAGGSQKM 74
GG+G RG+ SG G G S GG+++G + GG
Sbjct: 519 GGSGGRGSSSGG----------GYSSGSSSY---------GSGGRQSGSRGGSGGGGSIS 559
Query: 75 GVHIGVGASLEFR----GSSCGEEPLWGGPGDWAALEREGGRGRMIRGGFCVGG 124
G G G R G S G GG G GG RGG GG
Sbjct: 560 GGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGS---RGGSSSGG 610
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 33.5 bits (75), Expect = 0.13
Identities = 39/126 (30%), Positives = 43/126 (34%), Gaps = 25/126 (19%)
Query: 2 GSRGVQGDPDGLGGGT---GDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGG 58
G RG G GGG+ G G G G +G G G G SG GG
Sbjct: 462 GGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYG--GGSSG------------GG 507
Query: 59 KRAGGLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRG 118
GG GG G H G + GSS G +GG GG G G
Sbjct: 508 SSGGGY----GGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYG----G 559
Query: 119 GFCVGG 124
G GG
Sbjct: 560 GSSSGG 565
>gi|239749709 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 33.1 bits (74), Expect = 0.17
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 8 GDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAGGLRDA 67
G+ GG G G G R G G V G VW SR AEGG
Sbjct: 2 GEASSAPGGRGRSGLGGSGGAPRVRGRGTAVGVGIGVRVWRSR---RAEGGGAEAAAART 58
Query: 68 AGGSQKMGVHIGVGASLE 85
AGG + G A E
Sbjct: 59 AGGEPRAQRQAGSQADEE 76
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 33.1 bits (74), Expect = 0.17
Identities = 35/127 (27%), Positives = 43/127 (33%), Gaps = 7/127 (5%)
Query: 5 GVQGDPDGLGGGTGDRGAG-SGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAGG 63
G G G GG G G G G + G G+G G SG + GG GG
Sbjct: 45 GSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSG----GSVKYSGGGGSSGGG 100
Query: 64 LRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRGRMIRGGFC-- 121
+ G G G GS C G G + GG G + C
Sbjct: 101 SGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQS 160
Query: 122 VGGVAAG 128
GGV++G
Sbjct: 161 YGGVSSG 167
Score = 28.5 bits (62), Expect = 4.2
Identities = 33/140 (23%), Positives = 45/140 (32%), Gaps = 31/140 (22%)
Query: 15 GGTGDRGAGSG---EAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAGGLR------ 65
GG G G GSG +G G G G + ++ GG +GG
Sbjct: 117 GGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGC 176
Query: 66 -----------------DAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALER 108
GG G G +S + +SC +P +GG
Sbjct: 177 FSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGG--G 234
Query: 109 EGGRGRMIRGGFCVGGVAAG 128
GG G GG GG ++G
Sbjct: 235 SGGSGCFSSGG---GGGSSG 251
Score = 28.5 bits (62), Expect = 4.2
Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 17/117 (14%)
Query: 12 GLGGGT--GDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAE--------GGKRA 61
G GGG+ G G GSG G G G + + +V ++ A + GG
Sbjct: 180 GGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQ--QVTQTSCAPQPSYGGGSSGGGGSGG 237
Query: 62 GGLRDAAGGSQKMGVH-----IGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRG 113
G + GG G IG G + GS CG GG G + G+G
Sbjct: 238 SGCFSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVGGSGSGKG 294
>gi|34486092 adenylate cyclase 5 [Homo sapiens]
Length = 1261
Score = 33.1 bits (74), Expect = 0.17
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 10 PDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAGGLRDAAG 69
P G GGG+ A +G E R + VG+ E + R A E E G GG G
Sbjct: 132 PAGGGGGSAAAAASAGGTEVRPRSVEVGLEERRG----KGRAADELEAGAVEGGEGSGDG 187
Query: 70 GSQ-KMGVHIGVGASLEFRGSSC 91
GS G G GA L G+ C
Sbjct: 188 GSSADSGSGAGPGAVLSL-GACC 209
>gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens]
Length = 462
Score = 32.7 bits (73), Expect = 0.22
Identities = 40/149 (26%), Positives = 48/149 (32%), Gaps = 34/149 (22%)
Query: 25 GEAERRDTGLGVGVLEGESG---------EVWESRLALEAE--------GGKRAGGLRDA 67
G + + GLG GE+G E ES A E GG+R G
Sbjct: 255 GASPTTENGLGAAAGAGENGHCAPPPADVEPDESSAAAERRRRRGALRRGGRRRAGAEGG 314
Query: 68 AGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRG--------RMIRGG 119
AGG+ G G S S PG L R R R R
Sbjct: 315 AGGADGQGAGPGAAESGALTASR--------SPGPGGRLSRASSRSVEFFLSRRRRARSS 366
Query: 120 FCVGGVAAGRDWADIFLCALQRSE-VLCW 147
C VA R+ F+ A+ VLCW
Sbjct: 367 VCRRKVAQAREKRFTFVLAVVMGVFVLCW 395
>gi|182765442 homeobox A10 isoform a [Homo sapiens]
Length = 410
Score = 32.7 bits (73), Expect = 0.22
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 56 EGGKRAGGLRDAAGGSQKM--GVHIGVGASLEFRGSSCGEEPLWGGPGDWAALEREGGRG 113
E G GG GG GV++ A L + SCG P GG + AA GG G
Sbjct: 41 EAGGGGGGAGGGGGGGYYAHGGVYLPPAADLPYGLQSCGLFPTLGGKRNEAASPGSGGGG 100
Query: 114 RMIRGGFCVGGVAAGRDWADIFLCA 138
GG G G D++L A
Sbjct: 101 ----GGLGPGAHGYGPSPIDLWLDA 121
>gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Homo
sapiens]
Length = 1288
Score = 32.7 bits (73), Expect = 0.22
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 146 CWSHPLRRREGKRKTLSAPQGGSSLRTLPFRIIFSLLFLPSRFLEPLTPGDEEVL 200
CW PL + + L+AP G R+ P +++ L P LEP + E L
Sbjct: 16 CWQDPLAVALSRGRQLAAPPGRGCARSRPLSVVYVLTREPQPGLEPREGTEAEPL 70
>gi|153791670 keratin 76 [Homo sapiens]
Length = 638
Score = 32.3 bits (72), Expect = 0.29
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKRAG 62
SRGV G G G G G G + +G GV G SG + ++ + GG+ +
Sbjct: 522 SRGVFGGVSGSGSG----GYKGGSSSSSSSGYGVS---GGSGSGYGG-VSSGSTGGRGSS 573
Query: 63 GLRDAAGGSQKMGVHIGVGASLEFRGSSCGEEPLWGGPG 101
G ++ ++G + S GSS G GG G
Sbjct: 574 GSYQSSSSGSRLGGAGSISVSHSGMGSSSGSIQTSGGSG 612
Score = 29.6 bits (65), Expect = 1.9
Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 15/129 (11%)
Query: 3 SRGVQGDPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGEVWESRLALEAEGGKR-- 60
S G G G G G G+ S + + + V G S GG R
Sbjct: 36 SGGAGGGACGFRSGAGSFGSRSLYNLGSNKSISISVAAGSS--------RAGGFGGGRSS 87
Query: 61 ---AGGLRDAAGGSQKMGVHIGVGASLEFRGSS-CGEEPLWGGPGDWAALEREGGRGRMI 116
AGG GGS G G G F G+ G +GGPG + GG G
Sbjct: 88 CGFAGGYGGGFGGSYGGGFGGGRGVGSGFGGAGGFGGAGGFGGPGVFGGPGSFGGPGGFG 147
Query: 117 RGGFCVGGV 125
GGF GG+
Sbjct: 148 PGGF-PGGI 155
>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
Length = 1669
Score = 32.3 bits (72), Expect = 0.29
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 2 GSRGVQG--DPDGLGGGTGDRGAGSGEAERRDTGLGVGVLEGESGE 45
G +GV G P G G GD+GA + + G+G+ L GE G+
Sbjct: 1023 GEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGD 1068
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 32.3 bits (72), Expect = 0.29
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 8 GDPDGLGGGTGDRGAGSGEAER-----RDTGLGVGVLEGESGEVWESRLALEAEGGKRAG 62
G G GG GAG+G + R R L +G L+ + SR L A AG
Sbjct: 725 GPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAG 784
Query: 63 GLRDAAGGSQKMGVHIGVGASL 84
G GG++ GV G A+L
Sbjct: 785 GSGGGPGGAEGGGVTGGARAAL 806
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.141 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,735,047
Number of Sequences: 37866
Number of extensions: 519945
Number of successful extensions: 2793
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 2266
Number of HSP's gapped (non-prelim): 526
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.