Guide to the Human Genome
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Search of human proteins with 239751165

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo
sapiens]
         (484 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756667 PREDICTED: hypothetical protein [Homo sapiens]           994   0.0  
gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo ...   994   0.0  
gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo ...   994   0.0  
gi|239754195 PREDICTED: hypothetical protein [Homo sapiens]            35   0.12 
gi|239748723 PREDICTED: hypothetical protein XP_002346783 [Homo ...    35   0.12 
gi|239742758 PREDICTED: hypothetical protein XP_002342618 [Homo ...    35   0.12 
gi|22547204 hairless protein isoform a [Homo sapiens]                  33   0.44 
gi|22547207 hairless protein isoform b [Homo sapiens]                  33   0.44 
gi|223029463 fibrinogen C domain containing 1 [Homo sapiens]           33   0.76 
gi|223029461 fibrinogen C domain containing 1 [Homo sapiens]           33   0.76 
gi|85067503 arachidonate 15-lipoxygenase, second type isoform b ...    33   0.76 
gi|85067499 arachidonate 15-lipoxygenase, second type isoform a ...    33   0.76 
gi|85067501 arachidonate 15-lipoxygenase, second type isoform d ...    33   0.76 
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    32   0.99 
gi|169164530 PREDICTED: similar to hCG1818432 [Homo sapiens]           32   1.3  
gi|169164924 PREDICTED: similar to hCG1818432 [Homo sapiens]           32   1.3  
gi|169163549 PREDICTED: hypothetical protein LOC646960 [Homo sap...    32   1.3  
gi|77681565 NG5 protein [Homo sapiens]                                 32   1.7  
gi|24308115 interferon regulatory factor 2 binding protein 1 [Ho...    32   1.7  
gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo sa...    32   1.7  
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh...    32   1.7  
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo...    32   1.7  
gi|4507447 transcription factor AP-4 (activating enhancer bindin...    31   2.9  
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]            31   2.9  
gi|93141049 collagen, type XII, alpha 1 short isoform precursor ...    30   3.8  
gi|93141047 collagen, type XII, alpha 1 long isoform precursor [...    30   3.8  
gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens]       30   3.8  
gi|8923380 O-sialoglycoprotein endopeptidase [Homo sapiens]            30   3.8  
gi|54873613 agrin [Homo sapiens]                                       30   4.9  
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       30   4.9  

>gi|239756667 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 484

 Score =  994 bits (2571), Expect = 0.0
 Identities = 484/484 (100%), Positives = 484/484 (100%)

Query: 1   MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60
           MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP
Sbjct: 1   MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60

Query: 61  QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120
           QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC
Sbjct: 61  QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120

Query: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180
           GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH
Sbjct: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180

Query: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240
           KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ
Sbjct: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240

Query: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300
           DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY
Sbjct: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300

Query: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360
           EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW
Sbjct: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360

Query: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420
           LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR
Sbjct: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420

Query: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
           LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG
Sbjct: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480

Query: 481 AACS 484
           AACS
Sbjct: 481 AACS 484


>gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo
           sapiens]
          Length = 484

 Score =  994 bits (2571), Expect = 0.0
 Identities = 484/484 (100%), Positives = 484/484 (100%)

Query: 1   MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60
           MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP
Sbjct: 1   MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60

Query: 61  QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120
           QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC
Sbjct: 61  QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120

Query: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180
           GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH
Sbjct: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180

Query: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240
           KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ
Sbjct: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240

Query: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300
           DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY
Sbjct: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300

Query: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360
           EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW
Sbjct: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360

Query: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420
           LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR
Sbjct: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420

Query: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
           LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG
Sbjct: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480

Query: 481 AACS 484
           AACS
Sbjct: 481 AACS 484


>gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo
           sapiens]
          Length = 484

 Score =  994 bits (2571), Expect = 0.0
 Identities = 484/484 (100%), Positives = 484/484 (100%)

Query: 1   MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60
           MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP
Sbjct: 1   MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60

Query: 61  QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120
           QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC
Sbjct: 61  QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120

Query: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180
           GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH
Sbjct: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180

Query: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240
           KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ
Sbjct: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240

Query: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300
           DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY
Sbjct: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300

Query: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360
           EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW
Sbjct: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360

Query: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420
           LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR
Sbjct: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420

Query: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
           LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG
Sbjct: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480

Query: 481 AACS 484
           AACS
Sbjct: 481 AACS 484


>gi|239754195 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 631

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 7/128 (5%)

Query: 119 QCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVV 178
           Q GVG + R+G  K       HL V L   G     L E  AQ   +  ++++  + L V
Sbjct: 436 QGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRPAVVARDLVVALELAV 495

Query: 179 LHKMLPILELPSPSSRDALHRGGP-----LPPPTHGRCSGDEVRLHEQDVLAQLLQTRRE 233
           + +     ++  P  RD    GG      L P       G+E  L    ++ QL+Q    
Sbjct: 496 VRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEE--LSRGPIMQQLVQAAPN 553

Query: 234 QAGLLSQD 241
            A +   D
Sbjct: 554 SAAVTGDD 561


>gi|239748723 PREDICTED: hypothetical protein XP_002346783 [Homo
           sapiens]
          Length = 541

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 7/128 (5%)

Query: 119 QCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVV 178
           Q GVG + R+G  K       HL V L   G     L E  AQ   +  ++++  + L V
Sbjct: 346 QGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRPAVVARDLVVALELAV 405

Query: 179 LHKMLPILELPSPSSRDALHRGGP-----LPPPTHGRCSGDEVRLHEQDVLAQLLQTRRE 233
           + +     ++  P  RD    GG      L P       G+E  L    ++ QL+Q    
Sbjct: 406 VRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEE--LSRGPIMQQLVQAAPN 463

Query: 234 QAGLLSQD 241
            A +   D
Sbjct: 464 SAAVTGDD 471


>gi|239742758 PREDICTED: hypothetical protein XP_002342618 [Homo
           sapiens]
          Length = 631

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 7/128 (5%)

Query: 119 QCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVV 178
           Q GVG + R+G  K       HL V L   G     L E  AQ   +  ++++  + L V
Sbjct: 436 QGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRPAVVARDLVVALELAV 495

Query: 179 LHKMLPILELPSPSSRDALHRGGP-----LPPPTHGRCSGDEVRLHEQDVLAQLLQTRRE 233
           + +     ++  P  RD    GG      L P       G+E  L    ++ QL+Q    
Sbjct: 496 VRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEE--LSRGPIMQQLVQAAPN 553

Query: 234 QAGLLSQD 241
            A +   D
Sbjct: 554 SAAVTGDD 561


>gi|22547204 hairless protein isoform a [Homo sapiens]
          Length = 1189

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 405 LPQLLDVRGQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHP-EKETQPRGHR 463
           + Q+++ + QE+ L   G G   GP  R  L  P+   RPR  P       +E QP   R
Sbjct: 801 IAQVVERKIQEKAL---GPGLRAGPGLRKGLGLPLSPVRPRLPPPGALLWLQEPQPCPRR 857

Query: 464 GLAPGQERWQHGQ 476
           G    QE W+ GQ
Sbjct: 858 GFHLFQEHWRQGQ 870


>gi|22547207 hairless protein isoform b [Homo sapiens]
          Length = 1134

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 405 LPQLLDVRGQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHP-EKETQPRGHR 463
           + Q+++ + QE+ L   G G   GP  R  L  P+   RPR  P       +E QP   R
Sbjct: 801 IAQVVERKIQEKAL---GPGLRAGPGLRKGLGLPLSPVRPRLPPPGALLWLQEPQPCPRR 857

Query: 464 GLAPGQERWQHGQ 476
           G    QE W+ GQ
Sbjct: 858 GFHLFQEHWRQGQ 870


>gi|223029463 fibrinogen C domain containing 1 [Homo sapiens]
          Length = 461

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 62/230 (26%), Positives = 87/230 (37%), Gaps = 43/230 (18%)

Query: 224 LAQLLQTRREQAGLLSQDTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVT 283
           LA LL      A L       P   PPP           V   A   +S +V V  A   
Sbjct: 39  LAVLLAVAVTGAVLFLNHAHAPGTAPPPV----------VSTGAASANSALVTVERA--- 85

Query: 284 PSMRLSVLCDFSLVLIYEAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDA 343
            S  LS+L D     + ++F R    Q   LQ L      P L    D    L+  L D 
Sbjct: 86  DSSHLSILIDPRCPDLTDSFARLESAQASVLQALTEHQAQPRL--VGDQEQELLDTLADQ 143

Query: 344 LALLLVKAVLKEHSDVWLILIGVL-------QRLLELQPEVDESHHGILLLLRLLGQLQN 396
           L  LL +A     S++    +G+        Q L  LQ E          L++LL + Q 
Sbjct: 144 LPRLLARA-----SELQTECMGLRKGHGTLGQGLSALQSEQGR-------LIQLLSESQG 191

Query: 397 HLLALLDRLPQLLDVRGQEQTLPRLGAGAVKGPSCRSSLLR-PIRRDRPR 445
           H+  L++ +  +LD   +++ L R        P  ++ L R P R  RPR
Sbjct: 192 HMAHLVNSVSDILDALQRDRGLGR--------PRNKADLQRAPARGTRPR 233


>gi|223029461 fibrinogen C domain containing 1 [Homo sapiens]
          Length = 461

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 62/230 (26%), Positives = 87/230 (37%), Gaps = 43/230 (18%)

Query: 224 LAQLLQTRREQAGLLSQDTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVT 283
           LA LL      A L       P   PPP           V   A   +S +V V  A   
Sbjct: 39  LAVLLAVAVTGAVLFLNHAHAPGTAPPPV----------VSTGAASANSALVTVERA--- 85

Query: 284 PSMRLSVLCDFSLVLIYEAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDA 343
            S  LS+L D     + ++F R    Q   LQ L      P L    D    L+  L D 
Sbjct: 86  DSSHLSILIDPRCPDLTDSFARLESAQASVLQALTEHQAQPRL--VGDQEQELLDTLADQ 143

Query: 344 LALLLVKAVLKEHSDVWLILIGVL-------QRLLELQPEVDESHHGILLLLRLLGQLQN 396
           L  LL +A     S++    +G+        Q L  LQ E          L++LL + Q 
Sbjct: 144 LPRLLARA-----SELQTECMGLRKGHGTLGQGLSALQSEQGR-------LIQLLSESQG 191

Query: 397 HLLALLDRLPQLLDVRGQEQTLPRLGAGAVKGPSCRSSLLR-PIRRDRPR 445
           H+  L++ +  +LD   +++ L R        P  ++ L R P R  RPR
Sbjct: 192 HMAHLVNSVSDILDALQRDRGLGR--------PRNKADLQRAPARGTRPR 233


>gi|85067503 arachidonate 15-lipoxygenase, second type isoform b
           [Homo sapiens]
          Length = 602

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)

Query: 117 GEQCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHL 176
           GE  G G   ++ +   G R E+   + LD LG+E     E   Q     + E + RV L
Sbjct: 11  GEAFGAGTWDKVSVSIVGTRGESP-PLPLDNLGKEFTAGAEEDFQVT---LPEDVGRVLL 66

Query: 177 VVLHKMLPILELPSPSSRDA-LHRGGPLPPPTHG 209
           + +HK  P+L L  P + DA   R   L PP  G
Sbjct: 67  LRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGG 100


>gi|85067499 arachidonate 15-lipoxygenase, second type isoform a
           [Homo sapiens]
          Length = 647

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)

Query: 117 GEQCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHL 176
           GE  G G   ++ +   G R E+   + LD LG+E     E   Q     + E + RV L
Sbjct: 11  GEAFGAGTWDKVSVSIVGTRGESP-PLPLDNLGKEFTAGAEEDFQVT---LPEDVGRVLL 66

Query: 177 VVLHKMLPILELPSPSSRDA-LHRGGPLPPPTHG 209
           + +HK  P+L L  P + DA   R   L PP  G
Sbjct: 67  LRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGG 100


>gi|85067501 arachidonate 15-lipoxygenase, second type isoform d
           [Homo sapiens]
          Length = 676

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)

Query: 117 GEQCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHL 176
           GE  G G   ++ +   G R E+   + LD LG+E     E   Q     + E + RV L
Sbjct: 11  GEAFGAGTWDKVSVSIVGTRGESP-PLPLDNLGKEFTAGAEEDFQVT---LPEDVGRVLL 66

Query: 177 VVLHKMLPILELPSPSSRDA-LHRGGPLPPPTHG 209
           + +HK  P+L L  P + DA   R   L PP  G
Sbjct: 67  LRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGG 100


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 19/106 (17%)

Query: 190 SPSSRDALHRGGPLPPP-----------THGRCSGDEVRLHEQDVLAQLLQTRREQAGLL 238
           +P  R   H+  PLPPP           T  R  G+E        L +LL  RR QA   
Sbjct: 148 APRGRGRKHKTTPLPPPRLADVAPTPPKTPARKRGEEGTERMVQALTELL--RRAQAPQA 205

Query: 239 SQDTGRPLGMPPPSNPHLSRLKVP-VVYNACRDHSQVVPVAVAAVT 283
            +          PS P  SR + P      CR   Q V VA AAVT
Sbjct: 206 PRSRA-----CEPSTPRRSRGRPPGRPAGPCRRKQQAVVVAEAAVT 246


>gi|169164530 PREDICTED: similar to hCG1818432 [Homo sapiens]
          Length = 541

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 391 LGQLQNHLLALLDRLPQLLDVR-GQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRADP- 448
           L  L + LL LL    +LL  R G  +  P L   A+  P+ R S L P R  R  +   
Sbjct: 335 LRSLAHTLLGLLRNAQELLGPRPGLRRLAPAL---ALPAPALRESPLHPARELRLHSGSR 391

Query: 449 --DTPHPEKETQPRGHRGLAPGQE 470
              T  P++  +PRG     PG E
Sbjct: 392 AAGTRFPKRRPEPRGEANGCPGLE 415


>gi|169164924 PREDICTED: similar to hCG1818432 [Homo sapiens]
          Length = 541

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 391 LGQLQNHLLALLDRLPQLLDVR-GQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRADP- 448
           L  L + LL LL    +LL  R G  +  P L   A+  P+ R S L P R  R  +   
Sbjct: 335 LRSLAHTLLGLLRNAQELLGPRPGLRRLAPAL---ALPAPALRESPLHPARELRLHSGSR 391

Query: 449 --DTPHPEKETQPRGHRGLAPGQE 470
              T  P++  +PRG     PG E
Sbjct: 392 AAGTRFPKRRPEPRGEANGCPGLE 415


>gi|169163549 PREDICTED: hypothetical protein LOC646960 [Homo
           sapiens]
          Length = 541

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 391 LGQLQNHLLALLDRLPQLLDVR-GQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRADP- 448
           L  L + LL LL    +LL  R G  +  P L   A+  P+ R S L P R  R  +   
Sbjct: 335 LRSLAHTLLGLLRNAQELLGPRPGLRRLAPAL---ALPAPALRESPLHPARELRLHSGSR 391

Query: 449 --DTPHPEKETQPRGHRGLAPGQE 470
              T  P++  +PRG     PG E
Sbjct: 392 AAGTRFPKRRPEPRGEANGCPGLE 415


>gi|77681565 NG5 protein [Homo sapiens]
          Length = 306

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 8/52 (15%)

Query: 417 TLPRLGAG--------AVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPR 460
           TLPRLGAG        A +GPS  ++L RP     P      P P   T PR
Sbjct: 55  TLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPR 106


>gi|24308115 interferon regulatory factor 2 binding protein 1 [Homo
           sapiens]
          Length = 584

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 403 DRLPQLLDVRGQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRA---DPDTPHPEKETQP 459
           DR+  L+D   Q +    L  G   GP    +L  P  +D   A    P  P P+ + QP
Sbjct: 43  DRIELLIDAARQLKRSHVLPEGRSPGPP---ALKHPATKDLAAAAAQGPQLPPPQAQPQP 99

Query: 460 RGHRGLAPGQERW 472
            G  G   GQ+R+
Sbjct: 100 SGTGGGVSGQDRY 112


>gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo
           sapiens]
          Length = 669

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)

Query: 30  PYVIPFTGCVTQKGQCQLPRHHPTGGQGAAPQRTAQSPSPRVRGPGHTHLWKTAEQSAHT 89
           P +IP +G + +  +  L R  PT  +   P+       P   GP  T L  +  Q + T
Sbjct: 125 PKLIPVSGKLEKNMEKILIR--PTAFKPVLPKPRGAPSLPSFMGPRATGL--SGSQGSLT 180

Query: 90  DVWLSNGNSTSPSLQSSHT-KPLAWHRWGEQCGVGARARLG 129
            ++    +S+S S  SS   KPLA+  W   C  G  +  G
Sbjct: 181 QLFGGPASSSSSSSSSSAADKPLAFSGWASGCPSGTLSDSG 221


>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
           [Homo sapiens]
          Length = 690

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 188 LPSPSSRDALHRGGPLP----------PPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGL 237
           +P+PS+  +L   G  P          P  HG   G+   LH  D L QLL+  +  +GL
Sbjct: 441 VPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSA-LHHLDALDQLLEEAKVTSGL 499

Query: 238 LSQDTGRPLGMPPPSNPHL 256
           +   T   +    P+ P L
Sbjct: 500 VKPTTSPLIPTTTPARPLL 518


>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
           [Homo sapiens]
          Length = 723

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 188 LPSPSSRDALHRGGPLP----------PPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGL 237
           +P+PS+  +L   G  P          P  HG   G+   LH  D L QLL+  +  +GL
Sbjct: 474 VPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSA-LHHLDALDQLLEEAKVTSGL 532

Query: 238 LSQDTGRPLGMPPPSNPHL 256
           +   T   +    P+ P L
Sbjct: 533 VKPTTSPLIPTTTPARPLL 551


>gi|4507447 transcription factor AP-4 (activating enhancer binding
           protein 4) [Homo sapiens]
          Length = 338

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 127 RLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLHKMLPIL 186
           R+ LE+     EAH+  +   +  ++V L ++  Q   +H QE L+R    +  ++LP  
Sbjct: 169 RMMLEEQVRSLEAHMYPEKLKVIAQQVQLQQQQEQVRLLH-QEKLEREQQQLRTQLLPP- 226

Query: 187 ELPSPSSRDALHRGGPLPPPTH 208
             P+P+    +    P PPP+H
Sbjct: 227 --PAPTHHPTVIVPAPPPPPSH 246


>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 380

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 417 TLPRLGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQ 476
           T PR  +   + P+  +   RP R  RP + P  P P + +    H G  PG+ R +   
Sbjct: 170 TGPRHASPGARRPAPGARRSRP-RLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQP 228

Query: 477 GPPGAACS 484
              GA C+
Sbjct: 229 HLAGAGCA 236


>gi|93141049 collagen, type XII, alpha 1 short isoform precursor [Homo
            sapiens]
          Length = 1899

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 419  PRLGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLA-PGQERWQHGQG 477
            P  G GA KGP     +   I    PR D   P P+    P+G  GL+ PG++  Q  +G
Sbjct: 1590 PAGGPGA-KGPRGERGISGAIGPPGPRGDIGPPGPQGPPGPQGPNGLSIPGEQGRQGMKG 1648

Query: 478  PPG 480
              G
Sbjct: 1649 DAG 1651


>gi|93141047 collagen, type XII, alpha 1 long isoform precursor [Homo
            sapiens]
          Length = 3063

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 419  PRLGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLA-PGQERWQHGQG 477
            P  G GA KGP     +   I    PR D   P P+    P+G  GL+ PG++  Q  +G
Sbjct: 2754 PAGGPGA-KGPRGERGISGAIGPPGPRGDIGPPGPQGPPGPQGPNGLSIPGEQGRQGMKG 2812

Query: 478  PPG 480
              G
Sbjct: 2813 DAG 2815


>gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens]
          Length = 765

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 16/57 (28%), Positives = 23/57 (40%)

Query: 428 GPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPGAACS 484
           GP   + +   +    P       HP+ +T P    G +PG  R     GPPG + S
Sbjct: 687 GPKAVAFIHTDLPEPPPSLTVQRDHPQLKTPPSKLNGQSPGLARLGPATGPPGPSAS 743


>gi|8923380 O-sialoglycoprotein endopeptidase [Homo sapiens]
          Length = 335

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 14/95 (14%)

Query: 205 PPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQD-------TGRPLGMPPPSNPHLS 257
           PP  G   GD  R H + V+  LLQ    ++GL SQD        G  +G P  S   ++
Sbjct: 35  PPGTGFLPGDTAR-HHRAVILDLLQEALTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVA 93

Query: 258 RL------KVPVVYNACRDHSQVVPVAVAAVTPSM 286
           R       K  V  N C  H ++  +   A +P++
Sbjct: 94  RTVAQLWNKPLVGVNHCIGHIEMGRLITGATSPTV 128


>gi|54873613 agrin [Homo sapiens]
          Length = 2045

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 17/76 (22%)

Query: 4   DHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGA----- 58
           D PCV      + PGS  C +D      V   T C  +K +C+  R      QGA     
Sbjct: 700 DGPCVCDFSCQSVPGSPVCGSDG-----VTYSTECELKKARCESQRGLYVAAQGACRGPT 754

Query: 59  -------APQRTAQSP 67
                  AP   AQ+P
Sbjct: 755 FAPLPPVAPLHCAQTP 770


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 11/57 (19%)

Query: 424 GAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
           GA+  P  +  L +P     P AD    HP KE  P G +G          GQGPPG
Sbjct: 736 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPP-GEKG----------GQGPPG 781


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,001,353
Number of Sequences: 37866
Number of extensions: 1307854
Number of successful extensions: 4561
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 4520
Number of HSP's gapped (non-prelim): 85
length of query: 484
length of database: 18,247,518
effective HSP length: 106
effective length of query: 378
effective length of database: 14,233,722
effective search space: 5380346916
effective search space used: 5380346916
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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