Guide to the Human Genome
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Name: OSGEP Sequence: fasta or formatted (335aa) NCBI GI: 8923380
Description:

O-sialoglycoprotein endopeptidase

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         29           1
 C cysteine            2.7          9           1
 D aspartate           4.8         16           1
 E glutamate           6.3         21           1
 F phenylalanine       3.3         11           1
 G glycine            10.1         34           2
 H histidine           2.4          8           2
 I isoleucine          5.7         19           1
 K lysine              2.7          9           2
 L leucine             7.8         26           2
 M methionine          3.9         13           2
 N asparagine          3.0         10           1
 P proline             4.2         14           2
 Q glutamine           3.3         11           1
 R arginine            6.9         23           2
 S serine              4.8         16           1
 T threonine           7.2         24           1
 V valine              9.3         31           2
 W tryptophan          0.9          3           1
 Y tyrosine            2.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   O-sialoglycoprotein endopeptidase 
OSGEPL1               0.127   O-sialoglycoprotein endopeptidase-like 1 
SPEG                  0.012   SPEG complex locus 
ZMIZ2                 0.009   zinc finger, MIZ-type containing 2 isoform 1 
ZMIZ2                 0.009   zinc finger, MIZ-type containing 2 isoform 2 
LOC100293709          0.008   PREDICTED: hypothetical protein 
LOC100290329          0.008   PREDICTED: hypothetical protein XP_002347739 
LOC100289615          0.008   PREDICTED: hypothetical protein XP_002344167 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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