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Search of human proteins with 239750127
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750127 PREDICTED: hypothetical protein XP_002347282 [Homo
sapiens]
(457 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750127 PREDICTED: hypothetical protein XP_002347282 [Homo ... 931 0.0
gi|239755624 PREDICTED: hypothetical protein XP_002344645 [Homo ... 848 0.0
gi|239744435 PREDICTED: hypothetical protein XP_002343144 [Homo ... 530 e-150
gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo ... 36 0.064
gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo ... 36 0.064
gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sap... 36 0.083
gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sap... 36 0.083
gi|157504499 ankyrin repeat domain 47 [Homo sapiens] 35 0.11
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 35 0.18
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 34 0.24
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 34 0.24
gi|126032348 hect domain and RLD 2 [Homo sapiens] 34 0.32
gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo ... 34 0.32
gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo ... 34 0.32
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 34 0.32
gi|119220598 apolipoprotein B48 receptor [Homo sapiens] 33 0.41
gi|126722969 centromere protein T [Homo sapiens] 33 0.54
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 32 0.92
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 32 0.92
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 32 0.92
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 32 0.92
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 32 1.2
gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens] 32 1.2
gi|239749498 PREDICTED: hypothetical protein [Homo sapiens] 32 1.6
gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo ... 32 1.6
gi|6912486 U6 snRNA-associated Sm-like protein 4 [Homo sapiens] 31 2.0
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 31 2.0
gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens] 31 2.7
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 31 2.7
gi|116008447 CAP-GLY domain containing linker protein 2 isoform ... 31 2.7
>gi|239750127 PREDICTED: hypothetical protein XP_002347282 [Homo
sapiens]
Length = 457
Score = 931 bits (2407), Expect = 0.0
Identities = 457/457 (100%), Positives = 457/457 (100%)
Query: 1 MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAPDTVHITGTDGTHPLIHSPQKH 60
MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAPDTVHITGTDGTHPLIHSPQKH
Sbjct: 1 MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAPDTVHITGTDGTHPLIHSPQKH 60
Query: 61 VGVFVMACSENRSASDKWLWLLKAHGKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQ 120
VGVFVMACSENRSASDKWLWLLKAHGKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQ
Sbjct: 61 VGVFVMACSENRSASDKWLWLLKAHGKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQ 120
Query: 121 DVRYPERESCLLSMDMVGGPGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGPD 180
DVRYPERESCLLSMDMVGGPGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGPD
Sbjct: 121 DVRYPERESCLLSMDMVGGPGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGPD 180
Query: 181 ALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEEL 240
ALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEEL
Sbjct: 181 ALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEEL 240
Query: 241 RRHEVLAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACS 300
RRHEVLAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACS
Sbjct: 241 RRHEVLAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACS 300
Query: 301 QPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHR 360
QPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHR
Sbjct: 301 QPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHR 360
Query: 361 QEQEHASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELR 420
QEQEHASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELR
Sbjct: 361 QEQEHASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELR 420
Query: 421 GRLVSRGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC 457
GRLVSRGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC
Sbjct: 421 GRLVSRGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC 457
>gi|239755624 PREDICTED: hypothetical protein XP_002344645 [Homo
sapiens]
Length = 427
Score = 848 bits (2192), Expect = 0.0
Identities = 426/457 (93%), Positives = 426/457 (93%), Gaps = 30/457 (6%)
Query: 1 MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAPDTVHITGTDGTHPLIHSPQKH 60
MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAP
Sbjct: 1 MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAP--------------------- 39
Query: 61 VGVFVMACSENRSASDKWLWLLKAHGKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQ 120
ENRSASDKWLWLLKAHGKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQ
Sbjct: 40 ---------ENRSASDKWLWLLKAHGKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQ 90
Query: 121 DVRYPERESCLLSMDMVGGPGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGPD 180
DVRYPERESCLLSMDMVGGPGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEG D
Sbjct: 91 DVRYPERESCLLSMDMVGGPGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGSD 150
Query: 181 ALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEEL 240
ALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEEL
Sbjct: 151 ALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEEL 210
Query: 241 RRHEVLAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACS 300
RRHEVLAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACS
Sbjct: 211 RRHEVLAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACS 270
Query: 301 QPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHR 360
QPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHR
Sbjct: 271 QPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHR 330
Query: 361 QEQEHASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELR 420
QEQEHASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELR
Sbjct: 331 QEQEHASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELR 390
Query: 421 GRLVSRGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC 457
GRLVSRGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC
Sbjct: 391 GRLVSRGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC 427
>gi|239744435 PREDICTED: hypothetical protein XP_002343144 [Homo
sapiens]
Length = 278
Score = 530 bits (1365), Expect = e-150
Identities = 265/272 (97%), Positives = 267/272 (98%)
Query: 186 GRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEV 245
G + +THAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEV
Sbjct: 7 GARPARSKTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEV 66
Query: 246 LAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQ 305
LAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQ
Sbjct: 67 LAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQ 126
Query: 306 VQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHRQEQEH 365
VQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHRQEQEH
Sbjct: 127 VQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHRQEQEH 186
Query: 366 ASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELRGRLVS 425
ASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELRGRLVS
Sbjct: 187 ASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELRGRLVS 246
Query: 426 RGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC 457
RGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC
Sbjct: 247 RGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC 278
>gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo
sapiens]
Length = 609
Score = 36.2 bits (82), Expect = 0.064
Identities = 44/168 (26%), Positives = 60/168 (35%), Gaps = 17/168 (10%)
Query: 27 GPVPWGAMRQVAPDTV----HITGTDGTHPLIHSPQKHVGVFVMACSENRSASDKWLWLL 82
GP+P +R P H G P P + GV ++ R AS
Sbjct: 426 GPLPRPGLRSARPPRQCRGEHRLGPHAPMPSPRCPGEAQGV-----TDGRRASPS----- 475
Query: 83 KAHGKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGL 142
A G +V+ P P A P G R G+ VR PE ++ G
Sbjct: 476 -APGGDQDRVSTTPQPTAQPGSGAGPQRPGPTQKRGGRGVRVPEGSPARIAFSGRRGGAK 534
Query: 143 KPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGPDALVAAGRQAG 190
P E+ R + G A +++QL A G AL AA R +G
Sbjct: 535 AQPMAEAESLGDRERRDGG--GAAGGGAVAQLRAVGQGALCAAPRDSG 580
>gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo
sapiens]
Length = 240
Score = 36.2 bits (82), Expect = 0.064
Identities = 43/153 (28%), Positives = 59/153 (38%), Gaps = 13/153 (8%)
Query: 93 TEVPPPPASFNLSELPCAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKPPNWPQETR 152
+ V P A LS A +H A R R CL G +PPN TR
Sbjct: 70 SRVTPATALLPLSHRGRAQRRSMHAAAAQERSLGR-GCL---------GKEPPNRESWTR 119
Query: 153 C-PRSQLS--AGLCSAFHMSSISQLHAEGPDALVAAGRQAGALQTHAHVGVVDGEERGVA 209
PR +S A + S Q G L G +A A++T + G ++
Sbjct: 120 SDPRHCISQDASRSGSRVCRSRPQTRGSGGKKLRQRGEKAAAVKTCSGRSKKPGRQKAAV 179
Query: 210 GGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRR 242
G GRG ++AAAA +G G++L R
Sbjct: 180 MGAKSRGGRGKKPQKAAAAGAKSCNGGGKKLGR 212
>gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 451
Score = 35.8 bits (81), Expect = 0.083
Identities = 56/213 (26%), Positives = 78/213 (36%), Gaps = 35/213 (16%)
Query: 215 GPGRGAGQEEAAAAAVHRVSGPGEELRRHEVL-APAVADGHGALHELAGEQVAAGWLRLQ 273
GPGR G E AA +H V+ P ++ E P + G +L G+QV++G +Q
Sbjct: 14 GPGRSCGSEGTAAGNLH-VAFPRGVMQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQ 72
Query: 274 EADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHVAKEAAHWP 333
A C + + VLE E + G P Q P
Sbjct: 73 R-------------RAAMPVPDAWVCPVAQQHLNVLEEERKAGAGLSPTQRCG------P 113
Query: 334 PAVAALLP-PRAPDELASLVVLRRRLHRQEQEHASAAG----------ALGRCVPKQREV 382
A+ + P P +E R H Q A AAG A GR P +R
Sbjct: 114 RAIPGVHPRPARQEEAQRRPAPRSGSHEQGAVQARAAGRQQLQHRQPPARGR--PVRRRP 171
Query: 383 AAVAVPQEVLDARGQLLEVGRGVRRGVRHARGP 415
AA + +R + L+ RG +R V GP
Sbjct: 172 AARVLRLRCRGSRARSLQQARGQQR-VAQGSGP 203
>gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 487
Score = 35.8 bits (81), Expect = 0.083
Identities = 56/213 (26%), Positives = 78/213 (36%), Gaps = 35/213 (16%)
Query: 215 GPGRGAGQEEAAAAAVHRVSGPGEELRRHEVL-APAVADGHGALHELAGEQVAAGWLRLQ 273
GPGR G E AA +H V+ P ++ E P + G +L G+QV++G +Q
Sbjct: 14 GPGRSCGSEGTAAGNLH-VAFPRGVMQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQ 72
Query: 274 EADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHVAKEAAHWP 333
A C + + VLE E + G P Q P
Sbjct: 73 R-------------RAAMPVPDAWVCPVAQQHLNVLEEERKAGAGLSPTQRCG------P 113
Query: 334 PAVAALLP-PRAPDELASLVVLRRRLHRQEQEHASAAG----------ALGRCVPKQREV 382
A+ + P P +E R H Q A AAG A GR P +R
Sbjct: 114 RAIPGVHPRPARQEEAQRRPAPRSGSHEQGAVQARAAGRQQLQHRQPPARGR--PVRRRP 171
Query: 383 AAVAVPQEVLDARGQLLEVGRGVRRGVRHARGP 415
AA + +R + L+ RG +R V GP
Sbjct: 172 AARVLRLRCRGSRARSLQQARGQQR-VAQGSGP 203
>gi|157504499 ankyrin repeat domain 47 [Homo sapiens]
Length = 821
Score = 35.4 bits (80), Expect = 0.11
Identities = 71/248 (28%), Positives = 96/248 (38%), Gaps = 56/248 (22%)
Query: 212 RAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAGEQVAAGWLR 271
RA PGRG + + S P L APA + G L +L EQ+AA R
Sbjct: 149 RAPSPGRGVPRSPRGSGR----SSPAPNL------APA-SPGPAQL-QLVREQMAAALRR 196
Query: 272 LQE----ADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHVAK 327
L+E A + + E V +KAR+ A +QP + R + L+ + +
Sbjct: 197 LRELEDQARTLPELQEQVRALRAEKARLLAGRAQPEPDGEAETRPD----KLAQLRRLTE 252
Query: 328 EAAHWPPAVAALLPPRA--PDELAS------LVVLRRR---LHRQEQEHASAAGALGRCV 376
A A PRA PD LA+ L VL L Q AA A V
Sbjct: 253 RLATSERGGRARASPRADSPDGLAAGRSEGALQVLDGEVGSLDGTPQTREVAAEA----V 308
Query: 377 PKQREVAAVAVPQ----------EVLDARGQLLEVGRGV-----------RRGVRHARGP 415
P+ RE A AVP+ E ++A + E G+ R + H RG
Sbjct: 309 PETREAGAQAVPETREAGVEAAPETVEADAWVTEALLGLPAAAERELELLRASLEHQRGV 368
Query: 416 GDELRGRL 423
+ LRGRL
Sbjct: 369 SELLRGRL 376
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 34.7 bits (78), Expect = 0.18
Identities = 45/173 (26%), Positives = 56/173 (32%), Gaps = 21/173 (12%)
Query: 86 GKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKPP 145
G+G R E PPPP F + R G+ P MVGG G +P
Sbjct: 706 GRGGRGGNEPPPPPPPFRGA-----------RGGRSGGGPPNGRGGPGGGMVGGGGHRPH 754
Query: 146 NWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGPDALVAAGRQAGALQTHAHVGVVDGEE 205
P S M S + H EGP + G G + H +G
Sbjct: 755 EGPGGGMGNSSGHRPHEGPGGGMGSGHRPH-EGPGGSMGGG---GGHRPH------EGPG 804
Query: 206 RGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALH 258
G++GG P G G A GPG + P GHG H
Sbjct: 805 GGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPH 857
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 34.3 bits (77), Expect = 0.24
Identities = 75/249 (30%), Positives = 89/249 (35%), Gaps = 50/249 (20%)
Query: 183 VAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRR 242
VA+ GA A +V G E GVAGG A+G G AG A A V R+ R
Sbjct: 799 VASVAAEGAQVAWAGAVLVQGHEAGVAGG-ARGGGAAAG-GPLAGAVVQRMRQRRVRAGR 856
Query: 243 HEVLAPAVADGHGALHELAGEQVA---AGWLRLQEADYVGGVHEHVVVAAEQKARVRAAC 299
V A AVA AG Q A G R++ H H + RA C
Sbjct: 857 RRVGARAVA--------AAGRQGAGAGGGGRRVRHG------HGHGAAVLQ-----RAPC 897
Query: 300 SQPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLH 359
Q +GVR A+ AH P A A P R R
Sbjct: 898 RQQRHLAPAAAAAAAQGVR------AAQGRAHRPGAQGAPSHRHRPG-------ARGRRS 944
Query: 360 RQEQEHASAAG------ALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHAR 413
R+ A A G ALGR + V A A Q L A GQ+ +V R
Sbjct: 945 RRRAAVALAGGAHPARAALGRRRGGGQAVGARAAHQARL-AGGQVDQVVVAAR------A 997
Query: 414 GPGDELRGR 422
G D +RGR
Sbjct: 998 GDADGVRGR 1006
Score = 33.9 bits (76), Expect = 0.32
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 207 GVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAG--EQ 264
G AG QG RG + A A R + RRH + G LAG
Sbjct: 416 GQAGQPLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWRG 475
Query: 265 VAAGWLRLQEADYVGGVHEHVVVA 288
+ L LQ+A + GG HEHV+VA
Sbjct: 476 LRLQTLLLQDAPH-GGAHEHVLVA 498
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 34.3 bits (77), Expect = 0.24
Identities = 75/249 (30%), Positives = 89/249 (35%), Gaps = 50/249 (20%)
Query: 183 VAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRR 242
VA+ GA A +V G E GVAGG A+G G AG A A V R+ R
Sbjct: 799 VASVAAEGAQVAWAGAVLVQGHEAGVAGG-ARGGGAAAG-GPLAGAVVQRMRQRRVRAGR 856
Query: 243 HEVLAPAVADGHGALHELAGEQVA---AGWLRLQEADYVGGVHEHVVVAAEQKARVRAAC 299
V A AVA AG Q A G R++ H H + RA C
Sbjct: 857 RRVGARAVA--------AAGRQGAGAGGGGRRVRHG------HGHGAAVLQ-----RAPC 897
Query: 300 SQPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLH 359
Q +GVR A+ AH P A A P R R
Sbjct: 898 RQQRHLAPAAAAAAAQGVR------AAQGRAHRPGAQGAPSHRHRPG-------ARGRRS 944
Query: 360 RQEQEHASAAG------ALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHAR 413
R+ A A G ALGR + V A A Q L A GQ+ +V R
Sbjct: 945 RRRAAVALAGGAHPARAALGRRRGGGQAVGARAAHQARL-AGGQVDQVVVAAR------A 997
Query: 414 GPGDELRGR 422
G D +RGR
Sbjct: 998 GDADGVRGR 1006
Score = 33.9 bits (76), Expect = 0.32
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 207 GVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAG--EQ 264
G AG QG RG + A A R + RRH + G LAG
Sbjct: 416 GQAGQPLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWRG 475
Query: 265 VAAGWLRLQEADYVGGVHEHVVVA 288
+ L LQ+A + GG HEHV+VA
Sbjct: 476 LRLQTLLLQDAPH-GGAHEHVLVA 498
>gi|126032348 hect domain and RLD 2 [Homo sapiens]
Length = 4834
Score = 33.9 bits (76), Expect = 0.32
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 388 PQEVLDARGQLLEV--GRGVRRGVRHARGPGDELRGRLVSRGSVGGTLWRLLLRGPLLP- 444
P V+D +++ V GR R PGDEL+ + +S GSV G WR + P++P
Sbjct: 3654 PLTVMDGVNRIVSVRSGREWSDWSSELRIPGDELKWKFISDGSVNGWGWRFTVY-PIMPA 3712
Query: 445 RGPWRL 450
GP L
Sbjct: 3713 AGPKEL 3718
>gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo
sapiens]
Length = 220
Score = 33.9 bits (76), Expect = 0.32
Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 262 GEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVRE-- 319
G AAGW R + AD G V +A + + A ++ +V ER VE GV E
Sbjct: 66 GVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDER-VEAGVGEAQ 124
Query: 320 ----GPLQH------VAKEAAHWPPAVAALLP------PRAPDELASLVVLRRRLHRQEQ 363
G H E H A A +LP RA A + + RR R++Q
Sbjct: 125 RAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREERRQQ 184
Query: 364 EHASAAGA 371
H GA
Sbjct: 185 PHQPHCGA 192
>gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo
sapiens]
Length = 220
Score = 33.9 bits (76), Expect = 0.32
Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 262 GEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVRE-- 319
G AAGW R + AD G V +A + + A ++ +V ER VE GV E
Sbjct: 66 GVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDER-VEAGVGEAQ 124
Query: 320 ----GPLQH------VAKEAAHWPPAVAALLP------PRAPDELASLVVLRRRLHRQEQ 363
G H E H A A +LP RA A + + RR R++Q
Sbjct: 125 RAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREERRQQ 184
Query: 364 EHASAAGA 371
H GA
Sbjct: 185 PHQPHCGA 192
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 33.9 bits (76), Expect = 0.32
Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 205 ERGVAGGRAQGPGRGAGQEEA--AAAAVHRVSGPGEELRRHEVLAPAVADGHG 255
E G AGG A+GP G EEA AAAV G G + R E A HG
Sbjct: 30 EPGAAGGEAEGPEGSEGAEEAPRGAAAVKEAGGGGPD-RGPEAEARGTRGAHG 81
>gi|119220598 apolipoprotein B48 receptor [Homo sapiens]
Length = 1088
Score = 33.5 bits (75), Expect = 0.41
Identities = 50/200 (25%), Positives = 74/200 (37%), Gaps = 34/200 (17%)
Query: 72 RSASDKWLWLLKAHGK---------GCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQDV 122
R A +W W + GK G + E A +E P A G G++V
Sbjct: 194 RGAESEWTWHGETEGKAGAVGPKAAGDNREMEQGVREADAGETEEPGAEGAG---KGEEV 250
Query: 123 RYPERESCLLSMDMVGGPGLKPPNWP----QETRC-PRSQLSAGLCSAFHMSSIS----- 172
E+ GPG +P +W +E R P + + + +IS
Sbjct: 251 VVVEKACESTRAWGTWGPGAEPEDWGILGREEARTTPGREEARAILDGEEARTISGGEEA 310
Query: 173 QLHAEGPDALVAAG-RQAGALQTHAHVGVVDGEERGVA-GGRAQGPGRG-------AGQE 223
+ + G +A A+G +AG G+ G E G A GG G G +G+E
Sbjct: 311 ETASGGEEAETASGGEEAGTASGGEEAGIASGGEAGTASGGEEAGTASGGDEAWTTSGKE 370
Query: 224 EAAAAAVHRV---SGPGEEL 240
EA V + + PGE L
Sbjct: 371 EADLLGVRQTEYGAVPGERL 390
>gi|126722969 centromere protein T [Homo sapiens]
Length = 561
Score = 33.1 bits (74), Expect = 0.54
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 12/93 (12%)
Query: 170 SISQLHAEGPDALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAA--A 227
S+S++ A G G H V +G + G A A GPG +G E+A+ A
Sbjct: 343 SVSEMEATGAQGPSRVEEAEG----HTEVTEAEGSQ-GTA--EADGPGASSGDEDASGRA 395
Query: 228 AAVHRVSGPGEEL---RRHEVLAPAVADGHGAL 257
A+ S E L R H+ L PA A G L
Sbjct: 396 ASPESASSTPESLQARRHHQFLEPAPAPGAAVL 428
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 0.92
Identities = 36/132 (27%), Positives = 46/132 (34%), Gaps = 11/132 (8%)
Query: 140 PGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGPDALVAAGRQAGALQTHAHVG 199
P + P +E+ C L G C S G R+ G
Sbjct: 276 PRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRG-------G 328
Query: 200 VVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHE 259
+GE G A PGR +E AAV R +G GE RR L P HGAL
Sbjct: 329 GGEGEGTHATHGPASPPGRR--HDEEVGAAVLR-AGSGEGSRRGLQLTPPPRRVHGALQR 385
Query: 260 L-AGEQVAAGWL 270
G + + W+
Sbjct: 386 FGGGRNLKSNWM 397
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 0.92
Identities = 36/132 (27%), Positives = 46/132 (34%), Gaps = 11/132 (8%)
Query: 140 PGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGPDALVAAGRQAGALQTHAHVG 199
P + P +E+ C L G C S G R+ G
Sbjct: 276 PRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRG-------G 328
Query: 200 VVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHE 259
+GE G A PGR +E AAV R +G GE RR L P HGAL
Sbjct: 329 GGEGEGTHATHGPASPPGRR--HDEEVGAAVLR-AGSGEGSRRGLQLTPPPRRVHGALQR 385
Query: 260 L-AGEQVAAGWL 270
G + + W+
Sbjct: 386 FGGGRNLKSNWM 397
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 0.92
Identities = 36/132 (27%), Positives = 46/132 (34%), Gaps = 11/132 (8%)
Query: 140 PGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGPDALVAAGRQAGALQTHAHVG 199
P + P +E+ C L G C S G R+ G
Sbjct: 276 PRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRG-------G 328
Query: 200 VVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHE 259
+GE G A PGR +E AAV R +G GE RR L P HGAL
Sbjct: 329 GGEGEGTHATHGPASPPGRR--HDEEVGAAVLR-AGSGEGSRRGLQLTPPPRRVHGALQR 385
Query: 260 L-AGEQVAAGWL 270
G + + W+
Sbjct: 386 FGGGRNLKSNWM 397
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 32.3 bits (72), Expect = 0.92
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 205 ERGVAGGRAQGP--------GRGAGQEEAAAAAVHRVSGPGEE---LRRHEVLAPAVADG 253
+RG AG +GP G+ G+E+A AA + EE RH+++ P ADG
Sbjct: 201 DRGEAGSLQKGPKDFDRFLVGKELGREKAGKAAEGKERPAAEEDGGKERHKLVLPVPADG 260
Query: 254 H 254
H
Sbjct: 261 H 261
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 32.0 bits (71), Expect = 1.2
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 202 DGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHEL- 260
+GE G A PGR +E AAV R +G GE RR L P HGAL
Sbjct: 351 EGEGTHATHGPASPPGRR--HDEEVGAAVLR-AGSGEGSRRGLQLTPPPRRVHGALQRFG 407
Query: 261 AGEQVAAGWL 270
G + + W+
Sbjct: 408 GGRNLKSNWM 417
>gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens]
Length = 306
Score = 32.0 bits (71), Expect = 1.2
Identities = 45/146 (30%), Positives = 54/146 (36%), Gaps = 37/146 (25%)
Query: 207 GVAGGRAQGPGR------GAGQEEAAAAAVHRVSGPG--------EELRRHEVL------ 246
G AGGR GPGR GAG E A G G EEL E+L
Sbjct: 12 GAAGGRGSGPGRRRHLVPGAGGEAGEGAP----GGAGDYGNGLESEELEPEELLLEPEPE 67
Query: 247 -----------APAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARV 295
AP A G G G Q L E D G E + A KARV
Sbjct: 68 PEPEEEPPRPRAPPGAPGPGPGSGAPGSQEEEEEPGLVEGDPGDGAIEDPELEA-IKARV 126
Query: 296 RAACSQPVEQVQVLEREVEEGVREGP 321
R + E+++ L+ EVE+ + P
Sbjct: 127 R-EMEEEAEKLKELQNEVEKQMNMSP 151
>gi|239749498 PREDICTED: hypothetical protein [Homo sapiens]
Length = 692
Score = 31.6 bits (70), Expect = 1.6
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 237 GEELRRHEVLAPAVADGHG-----ALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQ 291
GEE H VL V+ H AL ++A E V A + E D +H V AE
Sbjct: 291 GEEAHSHHVLHRHVSVAHATALLNALQQVAHEGVHA-LAQALEHDQCQRDAQHGVEHAEG 349
Query: 292 KARVRAACSQPVEQVQV----LEREVEEGVREGPL 322
AR+ A CS P+ + +R+V EG E PL
Sbjct: 350 LARIGARCSVPITSLTYGGDDRDRKV-EGAGEFPL 383
>gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo
sapiens]
Length = 692
Score = 31.6 bits (70), Expect = 1.6
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 237 GEELRRHEVLAPAVADGHG-----ALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQ 291
GEE H VL V+ H AL ++A E V A + E D +H V AE
Sbjct: 291 GEEAHSHHVLHRHVSVAHATALLNALQQVAHEGVHA-LAQALEHDQCQRDAQHGVEHAEG 349
Query: 292 KARVRAACSQPVEQVQV----LEREVEEGVREGPL 322
AR+ A CS P+ + +R+V EG E PL
Sbjct: 350 LARIGARCSVPITSLTYGGDDRDRKV-EGAGEFPL 383
>gi|6912486 U6 snRNA-associated Sm-like protein 4 [Homo sapiens]
Length = 139
Score = 31.2 bits (69), Expect = 2.0
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 180 DALVAAGRQAGALQTHAHVGV--VDGEERGVAGGRAQG--PGRGAGQEE 224
+ +VA GR G LQ + G RGV GGR +G PG G GQ E
Sbjct: 81 EEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGIPGTGRGQPE 129
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 31.2 bits (69), Expect = 2.0
Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 15/125 (12%)
Query: 114 QVHRAGQDVRYPERESCLLSMDMVGGPGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQ 173
Q H+A +DV YP RE + + V + ++P Q + G + +
Sbjct: 106 QFHQAARDVGYPNREGAYQNREAVYRDKERDASYP-------LQDTTGYTARERDVAQCH 158
Query: 174 LHAEGPDALVAAGRQAGALQT-HAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHR 232
LH E P A GR+ G + AH G A G P R GQ A+ R
Sbjct: 159 LHHENP----ALGRERGGREAGPAHPGREKEAGYSAAVGVGPRPPRERGQLSRGAS---R 211
Query: 233 VSGPG 237
S PG
Sbjct: 212 SSSPG 216
>gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens]
Length = 462
Score = 30.8 bits (68), Expect = 2.7
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Query: 175 HAEGPDALVAAGRQAGALQTHAHVGVVDGEERGVAG-----GRAQGPGRGAGQEEAAAAA 229
H P A V + A + G + R AG G A G G G G E+ A
Sbjct: 275 HCAPPPADVEPDESSAAAERRRRRGALRRGGRRRAGAEGGAGGADGQGAGPGAAESGALT 334
Query: 230 VHRVSGPGEELRR 242
R GPG L R
Sbjct: 335 ASRSPGPGGRLSR 347
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 30.8 bits (68), Expect = 2.7
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 21/126 (16%)
Query: 184 AAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPG----RGAGQEEAAAAAVHRVSGPGEE 239
A G++A + G V G+E +A G G RG G+++AAAA + G G +
Sbjct: 66 AGGKKA---RLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRK 122
Query: 240 LRRHEVLAPAVAD-----------GHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVA 288
RR A A G+ + AG Q AA ++ GG A
Sbjct: 123 PRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQ---GGEKPQKAAA 179
Query: 289 AEQKAR 294
A K+R
Sbjct: 180 AGAKSR 185
>gi|116008447 CAP-GLY domain containing linker protein 2 isoform 1
[Homo sapiens]
Length = 1046
Score = 30.8 bits (68), Expect = 2.7
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 304 EQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHRQEQ 363
E+ +VL+ E E +R G ++ + + H P PP PD A ++ LR RL +
Sbjct: 501 EKSRVLQLEEELTLRRGEIEELQQCLLHSGPP-----PPDHPDA-AEILRLRERLLSASK 554
Query: 364 EHASAAGAL 372
EH +G L
Sbjct: 555 EHQRESGVL 563
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,192,309
Number of Sequences: 37866
Number of extensions: 1112124
Number of successful extensions: 4592
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 4494
Number of HSP's gapped (non-prelim): 166
length of query: 457
length of database: 18,247,518
effective HSP length: 106
effective length of query: 351
effective length of database: 14,233,722
effective search space: 4996036422
effective search space used: 4996036422
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.