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Search of human proteins with 239750047
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750047 PREDICTED: similar to neuron navigator 2, partial
[Homo sapiens]
(453 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750047 PREDICTED: similar to neuron navigator 2, partial [... 929 0.0
gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens] 929 0.0
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens] 929 0.0
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens] 929 0.0
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens] 929 0.0
gi|169218146 PREDICTED: similar to neuron navigator 3, partial [... 701 0.0
gi|120953251 neuron navigator 3 [Homo sapiens] 701 0.0
gi|239747580 PREDICTED: similar to NAV1 protein [Homo sapiens] 468 e-132
gi|27262622 neuron navigator 1 [Homo sapiens] 468 e-132
gi|16975496 cortactin binding protein 2 [Homo sapiens] 119 6e-27
gi|90093355 jumonji C domain containing histone demethylase 1 ho... 35 0.18
gi|11321607 thyroid hormone receptor interactor 13 [Homo sapiens] 33 0.53
gi|28827807 NLR family, pyrin domain containing 10 [Homo sapiens] 33 0.69
gi|5729999 Ras-related GTP binding A [Homo sapiens] 32 0.91
gi|46249395 Ras-related GTP binding B short isoform [Homo sapiens] 32 0.91
gi|91984775 regulator of telomere elongation helicase 1 isoform ... 32 1.2
gi|7706541 regulator of telomere elongation helicase 1 isoform 1... 32 1.2
gi|9955968 ATP-binding cassette, sub-family B (MDR/TAP), member ... 31 2.0
gi|9955966 ATP-binding cassette, sub-family B (MDR/TAP), member ... 31 2.0
gi|45243524 ATP-binding cassette, sub-family B (MDR/TAP), member... 31 2.0
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 30 4.5
gi|17865802 vacuolar protein sorting factor 4B [Homo sapiens] 30 4.5
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens] 30 5.9
gi|4506753 RuvB-like 1 [Homo sapiens] 30 5.9
gi|4506209 proteasome 26S ATPase subunit 2 [Homo sapiens] 30 5.9
gi|6005942 valosin-containing protein [Homo sapiens] 29 7.7
gi|21361116 versican isoform 1 [Homo sapiens] 29 7.7
gi|241666479 hypothetical protein LOC79363 [Homo sapiens] 29 7.7
gi|75677353 AAA-ATPase TOB3 [Homo sapiens] 29 7.7
gi|194018490 ATPase family, AAA domain containing 3C [Homo sapiens] 29 7.7
>gi|239750047 PREDICTED: similar to neuron navigator 2, partial
[Homo sapiens]
Length = 453
Score = 929 bits (2402), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT 60
HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT
Sbjct: 1 HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT 60
Query: 61 SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL 120
SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL
Sbjct: 61 SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL 120
Query: 121 SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN 180
SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN
Sbjct: 121 SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN 180
Query: 181 NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW 240
NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW
Sbjct: 181 NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW 240
Query: 241 VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS 300
VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS
Sbjct: 241 VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS 300
Query: 301 DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM 360
DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM
Sbjct: 301 DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM 360
Query: 361 DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ 420
DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ
Sbjct: 361 DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ 420
Query: 421 EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL 453
EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL
Sbjct: 421 EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL 453
>gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens]
Length = 1493
Score = 929 bits (2402), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT 60
HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT
Sbjct: 1041 HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT 1100
Query: 61 SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL 120
SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL
Sbjct: 1101 SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL 1160
Query: 121 SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN 180
SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN
Sbjct: 1161 SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN 1220
Query: 181 NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW 240
NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW
Sbjct: 1221 NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW 1280
Query: 241 VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS 300
VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS
Sbjct: 1281 VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS 1340
Query: 301 DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM 360
DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM
Sbjct: 1341 DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM 1400
Query: 361 DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ 420
DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ
Sbjct: 1401 DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ 1460
Query: 421 EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL 453
EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL
Sbjct: 1461 EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL 1493
>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
Length = 2365
Score = 929 bits (2402), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT 60
HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT
Sbjct: 1913 HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT 1972
Query: 61 SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL 120
SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL
Sbjct: 1973 SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL 2032
Query: 121 SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN 180
SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN
Sbjct: 2033 SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN 2092
Query: 181 NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW 240
NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW
Sbjct: 2093 NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW 2152
Query: 241 VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS 300
VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS
Sbjct: 2153 VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS 2212
Query: 301 DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM 360
DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM
Sbjct: 2213 DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM 2272
Query: 361 DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ 420
DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ
Sbjct: 2273 DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ 2332
Query: 421 EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL 453
EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL
Sbjct: 2333 EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL 2365
>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
Length = 2432
Score = 929 bits (2402), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT 60
HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT
Sbjct: 1980 HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT 2039
Query: 61 SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL 120
SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL
Sbjct: 2040 SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL 2099
Query: 121 SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN 180
SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN
Sbjct: 2100 SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN 2159
Query: 181 NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW 240
NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW
Sbjct: 2160 NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW 2219
Query: 241 VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS 300
VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS
Sbjct: 2220 VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS 2279
Query: 301 DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM 360
DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM
Sbjct: 2280 DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM 2339
Query: 361 DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ 420
DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ
Sbjct: 2340 DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ 2399
Query: 421 EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL 453
EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL
Sbjct: 2400 EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL 2432
>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
Length = 2429
Score = 929 bits (2402), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT 60
HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT
Sbjct: 1977 HLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNT 2036
Query: 61 SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL 120
SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL
Sbjct: 2037 SETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIIL 2096
Query: 121 SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN 180
SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN
Sbjct: 2097 SGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSEN 2156
Query: 181 NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW 240
NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW
Sbjct: 2157 NAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRW 2216
Query: 241 VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS 300
VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS
Sbjct: 2217 VLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSS 2276
Query: 301 DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM 360
DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM
Sbjct: 2277 DVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVM 2336
Query: 361 DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ 420
DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ
Sbjct: 2337 DTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQ 2396
Query: 421 EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL 453
EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL
Sbjct: 2397 EAANYSSPQSYDSDSNSNSHHDDILDSSLESTL 2429
>gi|169218146 PREDICTED: similar to neuron navigator 3, partial
[Homo sapiens]
Length = 733
Score = 701 bits (1808), Expect = 0.0
Identities = 324/451 (71%), Positives = 388/451 (86%), Gaps = 2/451 (0%)
Query: 3 FLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNTSE 62
+LIG IGVSGKTKWDVLDGV+RRLFKEY+ +D + LGL+SD + Y IG++ RS+ E
Sbjct: 285 YLIGSIGVSGKTKWDVLDGVIRRLFKEYVFRIDTSTSLGLSSDCIASYCIGDLIRSHNLE 344
Query: 63 TPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIILSG 122
PELLPCGYLVG+N I+V +KG+ ENSLDS VF++LIPKPI QRY +LL+EH RIILSG
Sbjct: 345 VPELLPCGYLVGDNNIITVNLKGVEENSLDSFVFDTLIPKPITQRYFNLLMEHHRIILSG 404
Query: 123 PSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSENNA 182
PSGTGKTYLAN+L+EY++ + GR+ T+ IATFNVDHKSSKEL+QYL+NLA+QC+++NN
Sbjct: 405 PSGTGKTYLANKLAEYVITKSGRKKTEDAIATFNVDHKSSKELQQYLANLAEQCSADNNG 464
Query: 183 VDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRWVL 242
V++P+VIILDNLHHV SL +IFNG LNCKY+KCPYIIGTMNQ SS+PNL+LHHNFRWVL
Sbjct: 465 VELPVVIILDNLHHVGSLSDIFNGFLNCKYNKCPYIIGTMNQGVSSSPNLELHHNFRWVL 524
Query: 243 CANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSSDV 302
CANHTEPVKGFLGR+LRRKL+E EI +RN +LVKIIDWIPK WHHLN FLE HSSSDV
Sbjct: 525 CANHTEPVKGFLGRYLRRKLIEIEIERNIRNNDLVKIIDWIPKTWHHLNSFLETHSSSDV 584
Query: 303 TIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVMDT 362
TIGPRLFL CP+DV+GSRVWF DLWNYS++PY+LEAVREGLQ+YG+R PWEDP+KWV+DT
Sbjct: 585 TIGPRLFLPCPMDVEGSRVWFMDLWNYSLVPYILEAVREGLQMYGKRTPWEDPSKWVLDT 644
Query: 363 YPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQEA 422
YPW+++ E P LLQLRPEDVG++ + +E +TSK +P +D EGDPLMNMLM+LQEA
Sbjct: 645 YPWSSATLPQESPALLQLRPEDVGYESCTSTKEATTSKHIPQTDTEGDPLMNMLMKLQEA 704
Query: 423 ANYSSPQSYDSDSNSNSHHDDILDSSLESTL 453
ANYSS QS DS+ S SHH+DILDSSLESTL
Sbjct: 705 ANYSSTQSCDSE--STSHHEDILDSSLESTL 733
>gi|120953251 neuron navigator 3 [Homo sapiens]
Length = 2363
Score = 701 bits (1808), Expect = 0.0
Identities = 324/451 (71%), Positives = 388/451 (86%), Gaps = 2/451 (0%)
Query: 3 FLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNTSE 62
+LIG IGVSGKTKWDVLDGV+RRLFKEY+ +D + LGL+SD + Y IG++ RS+ E
Sbjct: 1915 YLIGSIGVSGKTKWDVLDGVIRRLFKEYVFRIDTSTSLGLSSDCIASYCIGDLIRSHNLE 1974
Query: 63 TPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIILSG 122
PELLPCGYLVG+N I+V +KG+ ENSLDS VF++LIPKPI QRY +LL+EH RIILSG
Sbjct: 1975 VPELLPCGYLVGDNNIITVNLKGVEENSLDSFVFDTLIPKPITQRYFNLLMEHHRIILSG 2034
Query: 123 PSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSENNA 182
PSGTGKTYLAN+L+EY++ + GR+ T+ IATFNVDHKSSKEL+QYL+NLA+QC+++NN
Sbjct: 2035 PSGTGKTYLANKLAEYVITKSGRKKTEDAIATFNVDHKSSKELQQYLANLAEQCSADNNG 2094
Query: 183 VDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRWVL 242
V++P+VIILDNLHHV SL +IFNG LNCKY+KCPYIIGTMNQ SS+PNL+LHHNFRWVL
Sbjct: 2095 VELPVVIILDNLHHVGSLSDIFNGFLNCKYNKCPYIIGTMNQGVSSSPNLELHHNFRWVL 2154
Query: 243 CANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSSDV 302
CANHTEPVKGFLGR+LRRKL+E EI +RN +LVKIIDWIPK WHHLN FLE HSSSDV
Sbjct: 2155 CANHTEPVKGFLGRYLRRKLIEIEIERNIRNNDLVKIIDWIPKTWHHLNSFLETHSSSDV 2214
Query: 303 TIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVMDT 362
TIGPRLFL CP+DV+GSRVWF DLWNYS++PY+LEAVREGLQ+YG+R PWEDP+KWV+DT
Sbjct: 2215 TIGPRLFLPCPMDVEGSRVWFMDLWNYSLVPYILEAVREGLQMYGKRTPWEDPSKWVLDT 2274
Query: 363 YPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQEA 422
YPW+++ E P LLQLRPEDVG++ + +E +TSK +P +D EGDPLMNMLM+LQEA
Sbjct: 2275 YPWSSATLPQESPALLQLRPEDVGYESCTSTKEATTSKHIPQTDTEGDPLMNMLMKLQEA 2334
Query: 423 ANYSSPQSYDSDSNSNSHHDDILDSSLESTL 453
ANYSS QS DS+ S SHH+DILDSSLESTL
Sbjct: 2335 ANYSSTQSCDSE--STSHHEDILDSSLESTL 2363
>gi|239747580 PREDICTED: similar to NAV1 protein [Homo sapiens]
Length = 559
Score = 468 bits (1203), Expect = e-132
Identities = 230/452 (50%), Positives = 311/452 (68%), Gaps = 17/452 (3%)
Query: 3 FLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNTSE 62
F +GC VSGK W +LD V ++FK+YI +DP S LGL+++S+ GYSI +KR +E
Sbjct: 124 FFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKRVLDAE 183
Query: 63 TPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIILSG 122
PE+ PC V ISV++KGL E +DSLVFE+LIPKP++Q Y+SLL++HRR++LSG
Sbjct: 184 PPEMPPCRRGVNN---ISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSG 240
Query: 123 PSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSENNA 182
PSGTGKTYL NRL+EY+V R GRE+T+G+++TFN+ +S K+L+ YLSNLA+Q + E
Sbjct: 241 PSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGI 300
Query: 183 VDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRWVL 242
D+PLVI+LD+L S+ E+ NG L CKYHKCPYIIGT NQ TPN LH +FR +
Sbjct: 301 GDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLT 360
Query: 243 CANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSSDV 302
+N+ EP GFL R+LRRKL+E++ EL++++DW+PK+W+HL+ FLE HS+SD
Sbjct: 361 FSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKHSTSDF 420
Query: 303 TIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVMDT 362
IGP FLSCPI ++ R WF DLWN SIIPYL E ++G++++G++A WEDP +WV DT
Sbjct: 421 LIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDT 480
Query: 363 YPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQEA 422
PW ++ Q + L L P VG + P E T K PS + DPLM ML++LQEA
Sbjct: 481 LPWPSA--QQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLLKLQEA 538
Query: 423 ANY-SSPQSYDSDSNSNSHHDDILDSSLESTL 453
ANY SP + ILD +L++TL
Sbjct: 539 ANYIESPD-----------RETILDPNLQATL 559
>gi|27262622 neuron navigator 1 [Homo sapiens]
Length = 1874
Score = 468 bits (1203), Expect = e-132
Identities = 230/452 (50%), Positives = 311/452 (68%), Gaps = 17/452 (3%)
Query: 3 FLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNTSE 62
F +GC VSGK W +LD V ++FK+YI +DP S LGL+++S+ GYSI +KR +E
Sbjct: 1439 FFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKRVLDAE 1498
Query: 63 TPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIILSG 122
PE+ PC V ISV++KGL E +DSLVFE+LIPKP++Q Y+SLL++HRR++LSG
Sbjct: 1499 PPEMPPCRRGVNN---ISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSG 1555
Query: 123 PSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSENNA 182
PSGTGKTYL NRL+EY+V R GRE+T+G+++TFN+ +S K+L+ YLSNLA+Q + E
Sbjct: 1556 PSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGI 1615
Query: 183 VDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRWVL 242
D+PLVI+LD+L S+ E+ NG L CKYHKCPYIIGT NQ TPN LH +FR +
Sbjct: 1616 GDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLT 1675
Query: 243 CANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSSDV 302
+N+ EP GFL R+LRRKL+E++ EL++++DW+PK+W+HL+ FLE HS+SD
Sbjct: 1676 FSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKHSTSDF 1735
Query: 303 TIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVMDT 362
IGP FLSCPI ++ R WF DLWN SIIPYL E ++G++++G++A WEDP +WV DT
Sbjct: 1736 LIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDT 1795
Query: 363 YPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQEA 422
PW ++ Q + L L P VG + P E T K PS + DPLM ML++LQEA
Sbjct: 1796 LPWPSA--QQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLLKLQEA 1853
Query: 423 ANY-SSPQSYDSDSNSNSHHDDILDSSLESTL 453
ANY SP + ILD +L++TL
Sbjct: 1854 ANYIESPD-----------RETILDPNLQATL 1874
>gi|16975496 cortactin binding protein 2 [Homo sapiens]
Length = 1663
Score = 119 bits (298), Expect = 6e-27
Identities = 93/331 (28%), Positives = 159/331 (48%), Gaps = 32/331 (9%)
Query: 38 SQLGLNSDSVLGYSIGEIKRSNTSETPELLPCGYLVGENTT-ISVTVKGLAENSLDSLVF 96
S +GL++ S+ ++G + S ++ P ++ I+V + G E L S+ +
Sbjct: 1043 SNIGLSARSIRSITLGNVPWS-VGQSFAQSPWDFMRKNKAEHITVLLSGPQEGCLSSVTY 1101
Query: 97 ESLIPKPILQRYVSLLIEHRRIILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFN 156
S+IP ++Q Y+ L+ ++ +I GP G+ + Y+ ++L+ + R+ I
Sbjct: 1102 ASMIPLQMMQNYLRLVEQYHNVIFHGPEGSLQDYIVHQLALCLKHRQMAAGFSCEIVRAE 1161
Query: 157 VDHKSSKE-LRQYLSNLADQCNSENNAVDMPLVIILDNLHHVSSLGEIF----------- 204
VD SKE L + A + + ++IIL+NL SSL E+
Sbjct: 1162 VDAGFSKEQLLDLFISSACLIPVKQSPSKKKIIIILENLEK-SSLSELLRDFLAPLENRS 1220
Query: 205 ----------NGLLNCKY-HKCPYIIGTMNQATSSTPNLQLHHNFRWVLCANHTEPVKGF 253
NGL C Y H+ +++GT+ +A +L + +FRWV EP++G
Sbjct: 1221 TESPCTFQKGNGLSECYYFHENCFLMGTIAKACLQGSDLLVQQHFRWVQLRWDGEPMQGL 1280
Query: 254 LGRFLRRKLMETEISGRVRNM--ELVKIIDWIPKVWHHLNRFLEAHSSSDVTIGPRLFLS 311
L RFLRRK++ + G+ + + KI+DW VW LN L + + +GP+ FLS
Sbjct: 1281 LQRFLRRKVV-NKFKGQAPSPCDPVCKIVDWALSVWRQLNSCLARLGTPEALLGPKYFLS 1339
Query: 312 CPIDVDGSRV---WFTDLWNYSIIPYLLEAV 339
CP+ ++V W + LWN I P + EA+
Sbjct: 1340 CPVVPGHAQVTVKWMSKLWNGVIAPRVQEAI 1370
>gi|90093355 jumonji C domain containing histone demethylase 1
homolog D [Homo sapiens]
Length = 941
Score = 34.7 bits (78), Expect = 0.18
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 218 IIGTMNQATSSTPNLQLHHNFRWVLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELV 277
+I ++ A + + LH+ ++ + N + + + + +T++S V ++
Sbjct: 191 VIDVIDVARQADSKMTLHNYVKYFMNPNRPKVLN-----VISLEFSDTKMSELVEVPDIA 245
Query: 278 KIIDWIPKVWHHLNRFLEAHSSSDVTIGPR-LFLSCPIDVDGSRVWFTDLWNYSIIPYLL 336
K + W+ W + F + +G + + ID G+ VW+ LW I YL+
Sbjct: 246 KKLSWVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIF-YLI 304
Query: 337 EAVREGLQLY 346
+ E L Y
Sbjct: 305 KPTDENLARY 314
>gi|11321607 thyroid hormone receptor interactor 13 [Homo sapiens]
Length = 432
Score = 33.1 bits (74), Expect = 0.53
Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 4/142 (2%)
Query: 110 SLLIEHRRIILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYL 169
+L+ +R ++L GP GTGKT L L++ + +R G + N SK +
Sbjct: 167 NLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESG 226
Query: 170 SNLADQCNSENNAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPY-IIGTMNQATSS 228
+ + +D ++ + V SL N C+ P I +N +
Sbjct: 227 KLVTKMFQKIQDLIDDKDALVFVLIDEVESLTAARNA---CRAGTEPSDAIRVVNAVLTQ 283
Query: 229 TPNLQLHHNFRWVLCANHTEPV 250
++ H N + +N TE +
Sbjct: 284 IDQIKRHSNVVILTTSNITEKI 305
>gi|28827807 NLR family, pyrin domain containing 10 [Homo sapiens]
Length = 655
Score = 32.7 bits (73), Expect = 0.69
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 24 RRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNTSETPELLPCGYLVGENTTISVTV 83
R +++E++ ++ + G+N Y+ + +SE+PE L C + E SVTV
Sbjct: 99 REVYREHVRCLEEWQEAGVNGR----YNQVLLVAKPSSESPESLACPF--PEQELESVTV 152
Query: 84 KGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIILSGPSGTGKTYLANRL 135
+ L DS SL P ++L G +GTGKT LA ++
Sbjct: 153 EAL----FDSGEKPSLAPS--------------LVVLQGSAGTGKTTLARKM 186
>gi|5729999 Ras-related GTP binding A [Homo sapiens]
Length = 313
Score = 32.3 bits (72), Expect = 0.91
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 116 RRIILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQ 175
++++L G SG+GKT + + + + R+ R L AT +V+H + L + NL D
Sbjct: 8 KKVLLMGKSGSGKTSMRSIIFANYIARDTRRLG----ATIDVEHSHVRFLGNLVLNLWD- 62
Query: 176 CNSENNAVDMPLVIILDNL 194
C ++ ++ DN+
Sbjct: 63 CGGQDTFMENYFTSQRDNI 81
>gi|46249395 Ras-related GTP binding B short isoform [Homo sapiens]
Length = 346
Score = 32.3 bits (72), Expect = 0.91
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 116 RRIILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQ 175
++++L G SG+GKT + + + + R+ R L AT +V+H + L + NL D
Sbjct: 41 KKVLLMGKSGSGKTSMRSIIFANYIARDTRRLG----ATIDVEHSHVRFLGNLVLNLWD- 95
Query: 176 CNSENNAVDMPLVIILDNL 194
C ++ ++ DN+
Sbjct: 96 CGGQDTFMENYFTSQRDNI 114
>gi|91984775 regulator of telomere elongation helicase 1 isoform 2
[Homo sapiens]
Length = 1300
Score = 32.0 bits (71), Expect = 1.2
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 101 PKPILQRYVSLLIE--HRRI--ILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFN 156
P Q Y++ ++E +++ IL P+GTGKT L + RE L DG+ A
Sbjct: 17 PYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCL--LCTTLAWRE--HLRDGISAR-K 71
Query: 157 VDHKSSKEL--RQYLSNLADQCNSENNAV----DMPLVIILDNLHHVSSLGEIFNGLLNC 210
+ ++ EL + LS+ + + + + D+P +I H S L ++ N L N
Sbjct: 72 IAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTH--SQLTQVINELRNT 129
Query: 211 KYHKCPYIIGTMNQ-------ATSSTPNLQLHHNFRWVLCANHTEPVKGFLGRFLRRKLM 263
Y ++G+ Q + +LQ+H LC + K +
Sbjct: 130 SYRPKVCVLGSREQLCIHPEVKKQESNHLQIH------LCRKKVASRSCHFYNNVEEKSL 183
Query: 264 ETEISGRVRNME-LVK 278
E E++ + ++E LVK
Sbjct: 184 EQELASPILDIEDLVK 199
>gi|7706541 regulator of telomere elongation helicase 1 isoform 1
[Homo sapiens]
Length = 1219
Score = 32.0 bits (71), Expect = 1.2
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 101 PKPILQRYVSLLIE--HRRI--ILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFN 156
P Q Y++ ++E +++ IL P+GTGKT L + RE L DG+ A
Sbjct: 17 PYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCL--LCTTLAWRE--HLRDGISAR-K 71
Query: 157 VDHKSSKEL--RQYLSNLADQCNSENNAV----DMPLVIILDNLHHVSSLGEIFNGLLNC 210
+ ++ EL + LS+ + + + + D+P +I H S L ++ N L N
Sbjct: 72 IAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTH--SQLTQVINELRNT 129
Query: 211 KYHKCPYIIGTMNQ-------ATSSTPNLQLHHNFRWVLCANHTEPVKGFLGRFLRRKLM 263
Y ++G+ Q + +LQ+H LC + K +
Sbjct: 130 SYRPKVCVLGSREQLCIHPEVKKQESNHLQIH------LCRKKVASRSCHFYNNVEEKSL 183
Query: 264 ETEISGRVRNME-LVK 278
E E++ + ++E LVK
Sbjct: 184 EQELASPILDIEDLVK 199
>gi|9955968 ATP-binding cassette, sub-family B (MDR/TAP), member 9
isoform 2 [Homo sapiens]
Length = 723
Score = 31.2 bits (69), Expect = 2.0
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 104 ILQRYVSLLIEHRRIILSGPSGTGKTYLANRLSEYIVLREGRELTDG 150
+LQ L + L GPSG+GK+ N L + L GR L DG
Sbjct: 478 VLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDG 524
>gi|9955966 ATP-binding cassette, sub-family B (MDR/TAP), member 9
isoform 1 [Homo sapiens]
Length = 766
Score = 31.2 bits (69), Expect = 2.0
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 104 ILQRYVSLLIEHRRIILSGPSGTGKTYLANRLSEYIVLREGRELTDG 150
+LQ L + L GPSG+GK+ N L + L GR L DG
Sbjct: 521 VLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDG 567
>gi|45243524 ATP-binding cassette, sub-family B (MDR/TAP), member 9
isoform 1 [Homo sapiens]
Length = 766
Score = 31.2 bits (69), Expect = 2.0
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 104 ILQRYVSLLIEHRRIILSGPSGTGKTYLANRLSEYIVLREGRELTDG 150
+LQ L + L GPSG+GK+ N L + L GR L DG
Sbjct: 521 VLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDG 567
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 30.0 bits (66), Expect = 4.5
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 15/98 (15%)
Query: 117 RIILSGPSGTGKTYLANRLSEYI---------VLREGREL--TDGVIATFNVDHKSSKEL 165
RI L GP G+GKT +L+E + VL+E L V F D ++ +
Sbjct: 993 RICLVGPQGSGKTMCGRQLAEKLNIFHIQFEEVLQEKLLLKTEKKVGPEFEEDSENEQAA 1052
Query: 166 RQYLSNLADQCN----SENNAVDMPLVIILDNLHHVSS 199
+Q L LA Q N EN +P V + + + S
Sbjct: 1053 KQELEELAIQANVKVEEENTKKQLPEVQLTEEEEVIKS 1090
>gi|17865802 vacuolar protein sorting factor 4B [Homo sapiens]
Length = 444
Score = 30.0 bits (66), Expect = 4.5
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 83 VKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIILSGPSGTGKTYLANRLSEYIVLR 142
V GL E + ++L ++P + R I+L GP GTGK+YLA V
Sbjct: 136 VAGL-EGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAK-----AVAT 189
Query: 143 EGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSENNAVDMPLVIILDNL 194
E T I++ ++ K E + + NL Q EN P +I +D +
Sbjct: 190 EANNSTFFSISSSDLVSKWLGESEKLVKNLF-QLARENK----PSIIFIDEI 236
>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
Length = 980
Score = 29.6 bits (65), Expect = 5.9
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 66 LLPCGYLVGENTTISVTVKGLAENSLDSLVFE-SLIPKPILQRYVSLLIEHRRIILSGPS 124
L P +L E +T+ L+ L++LV E + KP LQ +LL ++L GP
Sbjct: 416 LSPVPWLPSEESTLW---SSLSPPGLEALVSELCAVLKPRLQPGGALLTGTSSVLLRGPP 472
Query: 125 GTGKT 129
G GKT
Sbjct: 473 GCGKT 477
>gi|4506753 RuvB-like 1 [Homo sapiens]
Length = 456
Score = 29.6 bits (65), Expect = 5.9
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 52 IGEIKRSNTSETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKP---ILQRY 108
I E+K +T++T + ++ G + + GLA+ + LV + + I++
Sbjct: 3 IEEVK--STTKTQRIASHSHVKG----LGLDESGLAKQAASGLVGQENAREACGVIVELI 56
Query: 109 VSLLIEHRRIILSGPSGTGKTYLANRLSE 137
S + R ++L+GP GTGKT LA +++
Sbjct: 57 KSKKMAGRAVLLAGPPGTGKTALALAIAQ 85
>gi|4506209 proteasome 26S ATPase subunit 2 [Homo sapiens]
Length = 433
Score = 29.6 bits (65), Expect = 5.9
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 73 VGENTTISVTVKGLAENSLDSLVFESLIPKPIL--QRYVSLLIEHRR-IILSGPSGTGKT 129
V E ++ + G + ++ L ++ P+L +R+V+L IE + ++L GP GTGKT
Sbjct: 166 VEEKPDVTYSDVGGCKEQIEKL--REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 130 Y----LANRLSEYIVLREGREL 147
+ANR + G EL
Sbjct: 224 LCARAVANRTDACFIRVIGSEL 245
>gi|6005942 valosin-containing protein [Homo sapiens]
Length = 806
Score = 29.3 bits (64), Expect = 7.7
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Query: 116 RRIILSGPSGTGKTYL----ANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSN 171
R I+L GP GTGKT + AN + L G E+ + +S LR+
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAG------ESESNLRKAFE- 291
Query: 172 LADQCNSENNAVDMPLVIILDNLHHVSSLGEIFNG 206
+E NA P +I +D L ++ E +G
Sbjct: 292 -----EAEKNA---PAIIFIDELDAIAPKREKTHG 318
>gi|21361116 versican isoform 1 [Homo sapiens]
Length = 3396
Score = 29.3 bits (64), Expect = 7.7
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 395 EGSTSKQMPPSDAEGDPLMNMLMRLQEAANYSSPQSY-DSDSNSNSHHDDILDSSLEST 452
EG T +P S G P N +R E S PQ+ + DSN NS +I +++ ST
Sbjct: 2342 EGPTVAPLPFSTDIGHP-QNQTVRWAEEIQTSRPQTITEQDSNKNSSTAEINETTTSST 2399
>gi|241666479 hypothetical protein LOC79363 [Homo sapiens]
Length = 258
Score = 29.3 bits (64), Expect = 7.7
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 99 LIPKPILQRYVSLLIEHRRIILSGPSGTGKTYLANRLS 136
L+ +P+L VS+ +I +SG SG GKT L +L+
Sbjct: 39 LLERPVLLPPVSIDTASYKIFVSGKSGVGKTALVAKLA 76
>gi|75677353 AAA-ATPase TOB3 [Homo sapiens]
Length = 648
Score = 29.3 bits (64), Expect = 7.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 115 HRRIILSGPSGTGKTYLANRLS 136
+R I+L GP GTGKT A +L+
Sbjct: 345 YRHILLYGPPGTGKTLFAKKLA 366
>gi|194018490 ATPase family, AAA domain containing 3C [Homo sapiens]
Length = 411
Score = 29.3 bits (64), Expect = 7.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 115 HRRIILSGPSGTGKTYLANRLS 136
+R I+L GP GTGKT A +L+
Sbjct: 170 YRHILLYGPPGTGKTLFAKKLA 191
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,723,131
Number of Sequences: 37866
Number of extensions: 806796
Number of successful extensions: 2278
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2243
Number of HSP's gapped (non-prelim): 40
length of query: 453
length of database: 18,247,518
effective HSP length: 106
effective length of query: 347
effective length of database: 14,233,722
effective search space: 4939101534
effective search space used: 4939101534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.