Guide to the Human Genome
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Search of human proteins with 239749996

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
         (487 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]         1009   0.0  
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]         1004   0.0  
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]          999   0.0  
gi|4504425 high-mobility group box 1 [Homo sapiens]                   329   4e-90
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]           309   3e-84
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]            266   3e-71
gi|194688135 high-mobility group box 2 [Homo sapiens]                 259   4e-69
gi|194688133 high-mobility group box 2 [Homo sapiens]                 259   4e-69
gi|11321591 high-mobility group box 2 [Homo sapiens]                  259   4e-69
gi|71143137 high-mobility group box 3 [Homo sapiens]                  224   2e-58
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...   212   5e-55
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...   212   5e-55
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...   212   7e-55
gi|169212060 PREDICTED: high mobility group protein B3-like prot...   192   8e-49
gi|239745831 PREDICTED: high mobility group protein B3-like prot...   192   8e-49
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]          187   2e-47
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]          187   2e-47
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...   187   2e-47
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...   187   2e-47
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...   187   2e-47
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...   187   2e-47
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...   180   3e-45
gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]          179   4e-45
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]          179   4e-45
gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]          166   3e-41
gi|57232750 HMG2 like isoform 1 [Homo sapiens]                        112   8e-25
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     83   6e-16
gi|7662322 thymus high mobility group box protein TOX [Homo sapi...    82   1e-15
gi|226246533 TOX high mobility group box family member 3 isoform...    80   3e-15
gi|226054295 TOX high mobility group box family member 3 isoform...    80   3e-15

>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score = 1009 bits (2608), Expect = 0.0
 Identities = 487/487 (100%), Positives = 487/487 (100%)

Query: 1   MELKLEAEGGEHYDIFLLIYRFCKKWRIYPEKYEDKVVPKANVNGDGFPSMKCSDELSLL 60
           MELKLEAEGGEHYDIFLLIYRFCKKWRIYPEKYEDKVVPKANVNGDGFPSMKCSDELSLL
Sbjct: 1   MELKLEAEGGEHYDIFLLIYRFCKKWRIYPEKYEDKVVPKANVNGDGFPSMKCSDELSLL 60

Query: 61  FLPTLDATLEPRPNAGCRETPKCLLITQKPLSSFGAYRGDQEGQCPALSKNCQLLLDSSL 120
           FLPTLDATLEPRPNAGCRETPKCLLITQKPLSSFGAYRGDQEGQCPALSKNCQLLLDSSL
Sbjct: 61  FLPTLDATLEPRPNAGCRETPKCLLITQKPLSSFGAYRGDQEGQCPALSKNCQLLLDSSL 120

Query: 121 GCPPGPLEHSQDCWIDHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKN 180
           GCPPGPLEHSQDCWIDHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKN
Sbjct: 121 GCPPGPLEHSQDCWIDHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKN 180

Query: 181 MSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL 240
           MSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL
Sbjct: 181 MSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL 240

Query: 241 YFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRA 300
           YFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRA
Sbjct: 241 YFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRA 300

Query: 301 KGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDEDEEDGDDEQSHW 360
           KGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDEDEEDGDDEQSHW
Sbjct: 301 KGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDEDEEDGDDEQSHW 360

Query: 361 QLFLACCPEDQRRLVPQCPANARAIACKTPVSFPPLSFLSAKEGSDLNAVGRPLGPLLSG 420
           QLFLACCPEDQRRLVPQCPANARAIACKTPVSFPPLSFLSAKEGSDLNAVGRPLGPLLSG
Sbjct: 361 QLFLACCPEDQRRLVPQCPANARAIACKTPVSFPPLSFLSAKEGSDLNAVGRPLGPLLSG 420

Query: 421 LQLAFRVLAVTLASGLSPDGLFFRRLPPYNRVDTSFQKYLFAYLQGRRGGNKVIEDKINY 480
           LQLAFRVLAVTLASGLSPDGLFFRRLPPYNRVDTSFQKYLFAYLQGRRGGNKVIEDKINY
Sbjct: 421 LQLAFRVLAVTLASGLSPDGLFFRRLPPYNRVDTSFQKYLFAYLQGRRGGNKVIEDKINY 480

Query: 481 YFSSLTK 487
           YFSSLTK
Sbjct: 481 YFSSLTK 487


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score = 1004 bits (2596), Expect = 0.0
 Identities = 487/488 (99%), Positives = 487/488 (99%), Gaps = 1/488 (0%)

Query: 1   MELKLEAEGGEHYDIFLLIYRFCKKWRIYPEKYEDKVVPKANVNGDGFPSMKCSDELSLL 60
           MELKLEAEGGEHYDIFLLIYRFCKKWRIYPEKYEDKVVPKANVNGDGFPSMKCSDELSLL
Sbjct: 1   MELKLEAEGGEHYDIFLLIYRFCKKWRIYPEKYEDKVVPKANVNGDGFPSMKCSDELSLL 60

Query: 61  FLPTLDATLEPRPNAGCRETPKCLLITQKPLSSFGAYRGDQEGQCPALSKNCQLLLDSSL 120
           FLPTLDATLEPRPNAGCRETPKCLLITQKPLSSFGAYRGDQEGQCPALSKNCQLLLDSSL
Sbjct: 61  FLPTLDATLEPRPNAGCRETPKCLLITQKPLSSFGAYRGDQEGQCPALSKNCQLLLDSSL 120

Query: 121 GCPPGPLEHSQDCWIDHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKN 180
           GCPPGPLEHSQDCWIDHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKN
Sbjct: 121 GCPPGPLEHSQDCWIDHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKN 180

Query: 181 MSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL 240
           MSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL
Sbjct: 181 MSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL 240

Query: 241 YFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRA 300
           YFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRA
Sbjct: 241 YFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRA 300

Query: 301 KGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDED-EEDGDDEQSH 359
           KGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDED EEDGDDEQSH
Sbjct: 301 KGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDEDEEEDGDDEQSH 360

Query: 360 WQLFLACCPEDQRRLVPQCPANARAIACKTPVSFPPLSFLSAKEGSDLNAVGRPLGPLLS 419
           WQLFLACCPEDQRRLVPQCPANARAIACKTPVSFPPLSFLSAKEGSDLNAVGRPLGPLLS
Sbjct: 361 WQLFLACCPEDQRRLVPQCPANARAIACKTPVSFPPLSFLSAKEGSDLNAVGRPLGPLLS 420

Query: 420 GLQLAFRVLAVTLASGLSPDGLFFRRLPPYNRVDTSFQKYLFAYLQGRRGGNKVIEDKIN 479
           GLQLAFRVLAVTLASGLSPDGLFFRRLPPYNRVDTSFQKYLFAYLQGRRGGNKVIEDKIN
Sbjct: 421 GLQLAFRVLAVTLASGLSPDGLFFRRLPPYNRVDTSFQKYLFAYLQGRRGGNKVIEDKIN 480

Query: 480 YYFSSLTK 487
           YYFSSLTK
Sbjct: 481 YYFSSLTK 488


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score =  999 bits (2583), Expect = 0.0
 Identities = 485/487 (99%), Positives = 485/487 (99%), Gaps = 1/487 (0%)

Query: 1   MELKLEAEGGEHYDIFLLIYRFCKKWRIYPEKYEDKVVPKANVNGDGFPSMKCSDELSLL 60
           MELKLEAEGGEHYDIFLLIYRFCKKWRIYPEKYEDKVVPKANVN DGFPSMKCSDELSLL
Sbjct: 1   MELKLEAEGGEHYDIFLLIYRFCKKWRIYPEKYEDKVVPKANVNEDGFPSMKCSDELSLL 60

Query: 61  FLPTLDATLEPRPNAGCRETPKCLLITQKPLSSFGAYRGDQEGQCPALSKNCQLLLDSSL 120
           FLPTLDATLEPRPNAGCRETPKCLLITQKPLSSFGAYRGDQEGQCPALSKNCQLLLDSSL
Sbjct: 61  FLPTLDATLEPRPNAGCRETPKCLLITQKPLSSFGAYRGDQEGQCPALSKNCQLLLDSSL 120

Query: 121 GCPPGPLEHSQDCWIDHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKN 180
           GCPPGPLEHSQDCWIDHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKN
Sbjct: 121 GCPPGPLEHSQDCWIDHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKN 180

Query: 181 MSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL 240
           MSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL
Sbjct: 181 MSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL 240

Query: 241 YFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRA 300
           YFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRA
Sbjct: 241 YFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRA 300

Query: 301 KGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDEDEEDGDDEQSHW 360
           KGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKD EDEDEEDDEDEEDGDDEQSHW
Sbjct: 301 KGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKD-EDEDEEDDEDEEDGDDEQSHW 359

Query: 361 QLFLACCPEDQRRLVPQCPANARAIACKTPVSFPPLSFLSAKEGSDLNAVGRPLGPLLSG 420
           QLFLACCPEDQRRLVPQCPANARAIACKTPVSFPPLSFLSAKEGSDLNAVGRPLGPLLSG
Sbjct: 360 QLFLACCPEDQRRLVPQCPANARAIACKTPVSFPPLSFLSAKEGSDLNAVGRPLGPLLSG 419

Query: 421 LQLAFRVLAVTLASGLSPDGLFFRRLPPYNRVDTSFQKYLFAYLQGRRGGNKVIEDKINY 480
           LQLAFRVLAVTLASGLSPDGLFFRRLPPYNRVDTSFQKYLFAYLQGRRGGNKVIEDKINY
Sbjct: 420 LQLAFRVLAVTLASGLSPDGLFFRRLPPYNRVDTSFQKYLFAYLQGRRGGNKVIEDKINY 479

Query: 481 YFSSLTK 487
           YFSSLTK
Sbjct: 480 YFSSLTK 486


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score =  329 bits (843), Expect = 4e-90
 Identities = 162/188 (86%), Positives = 171/188 (90%), Gaps = 7/188 (3%)

Query: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223
           SVNFSEFSKKCSERWK MSAKEKGKF       EDMAKADKA Y+REMKTYIPPKGETKK
Sbjct: 35  SVNFSEFSKKCSERWKTMSAKEKGKF-------EDMAKADKARYEREMKTYIPPKGETKK 87

Query: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283
           KFKDPNAPKRPPSAFFL+ SEY PKIKGE PGLS GDVAKKLGEMWNNTAADDKQPYEK+
Sbjct: 88  KFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147

Query: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343
           +AKLKEKYEKDIAAYRAKGK DAA  GVVKA KSKKKKEEEE+EEDEEDEEEE+DEEDED
Sbjct: 148 AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 207

Query: 344 EEDDEDEE 351
           EE+D+D+E
Sbjct: 208 EEEDDDDE 215


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score =  309 bits (792), Expect = 3e-84
 Identities = 154/185 (83%), Positives = 165/185 (89%), Gaps = 8/185 (4%)

Query: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223
           SVNFSEFS KCSERWK MSAKEKGKF       EDMAKADK HY+R+MKTYIPPKGETKK
Sbjct: 35  SVNFSEFSNKCSERWKTMSAKEKGKF-------EDMAKADKTHYERQMKTYIPPKGETKK 87

Query: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283
           KFKDPNAPKRPPSAFFL+ SEY PKIKGE PGLS GDVAKKLGEMWNNTAADDKQP EK+
Sbjct: 88  KFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPGEKK 147

Query: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343
           +AKLKEKYEKDIAAY+AKGK +AA  GVVKA KSKKKKEEEE+EEDEEDEEEE DEEDE+
Sbjct: 148 AAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE-DEEDEE 206

Query: 344 EEDDE 348
           ++DDE
Sbjct: 207 DDDDE 211



 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 53/207 (25%), Positives = 79/207 (38%), Gaps = 77/207 (37%)

Query: 227 DPNAPKRPPS--AFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284
           DP  P+   S  AFF+       K K     ++F + + K  E W   +A +K  +E  +
Sbjct: 5   DPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMA 64

Query: 285 AKLKEKYEKDIAAY---------------------------------RAKGKH------- 304
              K  YE+ +  Y                                 + KG+H       
Sbjct: 65  KADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGD 124

Query: 305 --------------DAANNGVVKAAKSKKKKEE---------------------EENEED 329
                         D    G  KAAK K+K E+                     E++++ 
Sbjct: 125 VAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKK 184

Query: 330 EEDEEEEKDEEDEDEEDDEDEEDGDDE 356
           +E+EE+E+DEEDE+EED+EDEED DDE
Sbjct: 185 KEEEEDEEDEEDEEEEDEEDEEDDDDE 211


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score =  266 bits (680), Expect = 3e-71
 Identities = 136/181 (75%), Positives = 149/181 (82%), Gaps = 10/181 (5%)

Query: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223
           SV FSEF KKCSE WK + AKEKGKF       EDMAKADKAHY+REMKTYIPPKGE KK
Sbjct: 709 SVKFSEFLKKCSETWKTIFAKEKGKF-------EDMAKADKAHYEREMKTYIPPKGEKKK 761

Query: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283
           KFKDPNAPKRPP AFFL+ SEY PKIKGE PGLS  DV KKL  MWNNTAA DKQ YEK+
Sbjct: 762 KFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKK 821

Query: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343
           +AKLKEKY+KDIAAYRAKGK ++A   VVKA KSKKKKEEEE   DEEDE+EE++EED+D
Sbjct: 822 AAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEE---DEEDEQEEENEEDDD 878

Query: 344 E 344
           +
Sbjct: 879 K 879



 Score = 38.1 bits (87), Expect = 0.018
 Identities = 38/177 (21%), Positives = 63/177 (35%), Gaps = 72/177 (40%)

Query: 248 KIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAY--------- 298
           K K     + F +  KK  E W    A +K  +E  +   K  YE+++  Y         
Sbjct: 702 KKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGEKKK 761

Query: 299 ------------------------RAKGKHDAA-------------NNGVV--------K 313
                                   + KG+H                NN           K
Sbjct: 762 KFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKK 821

Query: 314 AAKSKKKKEEE------------------ENEEDEEDEEEEKDEEDEDEEDDEDEED 352
           AAK K+K +++                  + E+ ++ +EEE+DEEDE EE++E+++D
Sbjct: 822 AAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDD 878


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  259 bits (662), Expect = 4e-69
 Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 7/182 (3%)

Query: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223
           SVNF+EFSKKCSERWK MSAKEK KF       EDMAK+DKA Y REMK Y+PPKG+ K 
Sbjct: 35  SVNFAEFSKKCSERWKTMSAKEKSKF-------EDMAKSDKARYDREMKNYVPPKGDKKG 87

Query: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283
           K KDPNAPKRPPSAFFL+ SE+ PKIK E PGLS GD AKKLGEMW+  +A DKQPYE++
Sbjct: 88  KKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147

Query: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343
           +AKLKEKYEKDIAAYRAKGK +A   G  +   SKKK E E+ EE+EE+E+E+++EEDED
Sbjct: 148 AAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDED 207

Query: 344 EE 345
           EE
Sbjct: 208 EE 209



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 49/205 (23%), Positives = 76/205 (37%), Gaps = 80/205 (39%)

Query: 227 DPNAPKRPPS--AFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284
           DPN P+   S  AFF+       K K     ++F + +KK  E W   +A +K  +E  +
Sbjct: 5   DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64

Query: 285 AKLKEKYEKDIAAY---------------------------------RAKGKHDAANNGV 311
              K +Y++++  Y                                 + K +H   + G 
Sbjct: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124

Query: 312 V---------------------KAAKSKKKKEEE-----------------------ENE 327
                                 KAAK K+K E++                       + +
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184

Query: 328 EDEEDEEEEKDEEDED-EEDDEDEE 351
            + EDEEEE++EEDED EE+DEDEE
Sbjct: 185 NEPEDEEEEEEEEDEDEEEEDEDEE 209


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  259 bits (662), Expect = 4e-69
 Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 7/182 (3%)

Query: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223
           SVNF+EFSKKCSERWK MSAKEK KF       EDMAK+DKA Y REMK Y+PPKG+ K 
Sbjct: 35  SVNFAEFSKKCSERWKTMSAKEKSKF-------EDMAKSDKARYDREMKNYVPPKGDKKG 87

Query: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283
           K KDPNAPKRPPSAFFL+ SE+ PKIK E PGLS GD AKKLGEMW+  +A DKQPYE++
Sbjct: 88  KKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147

Query: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343
           +AKLKEKYEKDIAAYRAKGK +A   G  +   SKKK E E+ EE+EE+E+E+++EEDED
Sbjct: 148 AAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDED 207

Query: 344 EE 345
           EE
Sbjct: 208 EE 209



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 49/205 (23%), Positives = 76/205 (37%), Gaps = 80/205 (39%)

Query: 227 DPNAPKRPPS--AFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284
           DPN P+   S  AFF+       K K     ++F + +KK  E W   +A +K  +E  +
Sbjct: 5   DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64

Query: 285 AKLKEKYEKDIAAY---------------------------------RAKGKHDAANNGV 311
              K +Y++++  Y                                 + K +H   + G 
Sbjct: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124

Query: 312 V---------------------KAAKSKKKKEEE-----------------------ENE 327
                                 KAAK K+K E++                       + +
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184

Query: 328 EDEEDEEEEKDEEDED-EEDDEDEE 351
            + EDEEEE++EEDED EE+DEDEE
Sbjct: 185 NEPEDEEEEEEEEDEDEEEEDEDEE 209


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  259 bits (662), Expect = 4e-69
 Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 7/182 (3%)

Query: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223
           SVNF+EFSKKCSERWK MSAKEK KF       EDMAK+DKA Y REMK Y+PPKG+ K 
Sbjct: 35  SVNFAEFSKKCSERWKTMSAKEKSKF-------EDMAKSDKARYDREMKNYVPPKGDKKG 87

Query: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283
           K KDPNAPKRPPSAFFL+ SE+ PKIK E PGLS GD AKKLGEMW+  +A DKQPYE++
Sbjct: 88  KKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147

Query: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343
           +AKLKEKYEKDIAAYRAKGK +A   G  +   SKKK E E+ EE+EE+E+E+++EEDED
Sbjct: 148 AAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDED 207

Query: 344 EE 345
           EE
Sbjct: 208 EE 209



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 49/205 (23%), Positives = 76/205 (37%), Gaps = 80/205 (39%)

Query: 227 DPNAPKRPPS--AFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284
           DPN P+   S  AFF+       K K     ++F + +KK  E W   +A +K  +E  +
Sbjct: 5   DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64

Query: 285 AKLKEKYEKDIAAY---------------------------------RAKGKHDAANNGV 311
              K +Y++++  Y                                 + K +H   + G 
Sbjct: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124

Query: 312 V---------------------KAAKSKKKKEEE-----------------------ENE 327
                                 KAAK K+K E++                       + +
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184

Query: 328 EDEEDEEEEKDEEDED-EEDDEDEE 351
            + EDEEEE++EEDED EE+DEDEE
Sbjct: 185 NEPEDEEEEEEEEDEDEEEEDEDEE 209


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score =  224 bits (570), Expect = 2e-58
 Identities = 115/180 (63%), Positives = 133/180 (73%), Gaps = 13/180 (7%)

Query: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222
           V VNF+EFSKKCSERWK MS KEK KF       ++MAKADK  Y REMK Y P KG  K
Sbjct: 34  VPVNFAEFSKKCSERWKTMSGKEKSKF-------DEMAKADKVRYDREMKDYGPAKGGKK 86

Query: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282
           KK  DPNAPKRPPS FFL+ SE+ PKIK   PG+S GDVAKKLGEMWNN    +KQPY  
Sbjct: 87  KK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYIT 144

Query: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDE 342
           ++AKLKEKYEKD+A Y++KGK D A       AK  +KK EEE+EE+EE+EEEE++EEDE
Sbjct: 145 KAAKLKEKYEKDVADYKSKGKFDGAKG----PAKVARKKVEEEDEEEEEEEEEEEEEEDE 200



 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 74/196 (37%)

Query: 227 DPNAPKRPPSA--FFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284
           DP  PK   SA  FF+       K K     ++F + +KK  E W   +  +K  +++ +
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64

Query: 285 AKLKEKYEKDIAAY-RAKG--------------------------KHDAANNG------- 310
              K +Y++++  Y  AKG                          K  + N G       
Sbjct: 65  KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVA 124

Query: 311 ------------------VVKAAKSKKKKEEE--------------------ENEEDEED 332
                             + KAAK K+K E++                      + +EED
Sbjct: 125 KKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEED 184

Query: 333 EEEEKDEEDEDEEDDE 348
           EEEE++EE+E+EE+DE
Sbjct: 185 EEEEEEEEEEEEEEDE 200



 Score = 30.8 bits (68), Expect = 2.9
 Identities = 17/73 (23%), Positives = 28/73 (38%)

Query: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199
           P RP        S            ++  + +KK  E W N++  EK  +     K ++ 
Sbjct: 93  PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEK 152

Query: 200 AKADKAHYKREMK 212
            + D A YK + K
Sbjct: 153 YEKDVADYKSKGK 165


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  212 bits (540), Expect = 5e-55
 Identities = 112/180 (62%), Positives = 129/180 (71%), Gaps = 14/180 (7%)

Query: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222
           V VNF+EFSKKCS RWK MS+KEK KFG       +MAKAD+  Y REMK Y P KG  K
Sbjct: 34  VPVNFAEFSKKCSGRWKTMSSKEKFKFG-------EMAKADEVCYDREMKDYGPAKGGKK 86

Query: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282
           K   DPNAPKRPPS FFL+ SE+ PKIK   PG+S GDVAKKLGEMWNN    +KQPY  
Sbjct: 87  K---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVT 143

Query: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDE 342
           ++AKLKEKYEKD+   + KGK      G  + AK  +KK EEE+EEDEE+EE+EKDEEDE
Sbjct: 144 KAAKLKEKYEKDVVDCKLKGKF----YGAKRPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  212 bits (540), Expect = 5e-55
 Identities = 112/180 (62%), Positives = 129/180 (71%), Gaps = 14/180 (7%)

Query: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222
           V VNF+EFSKKCS RWK MS+KEK KFG       +MAKAD+  Y REMK Y P KG  K
Sbjct: 34  VPVNFAEFSKKCSGRWKTMSSKEKFKFG-------EMAKADEVCYDREMKDYGPAKGGKK 86

Query: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282
           K   DPNAPKRPPS FFL+ SE+ PKIK   PG+S GDVAKKLGEMWNN    +KQPY  
Sbjct: 87  K---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVT 143

Query: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDE 342
           ++AKLKEKYEKD+   + KGK      G  + AK  +KK EEE+EEDEE+EE+EKDEEDE
Sbjct: 144 KAAKLKEKYEKDVVDCKLKGKF----YGAKRPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  212 bits (539), Expect = 7e-55
 Identities = 112/180 (62%), Positives = 129/180 (71%), Gaps = 14/180 (7%)

Query: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222
           V VNF+EFSKKCS RWK MS+KEK KFG       +MAKAD+  Y REMK Y P KG  K
Sbjct: 34  VLVNFAEFSKKCSGRWKTMSSKEKFKFG-------EMAKADEVCYDREMKDYGPAKGGKK 86

Query: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282
           K   DPNAPKRPPS FFL+ SE+ PKIK   PG+S GDVAKKLGEMWNN    +KQPY  
Sbjct: 87  K---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVT 143

Query: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDE 342
           ++AKLKEKYEKD+   + KGK      G  + AK  +KK EEE+EEDEE+EE+EKDEEDE
Sbjct: 144 KAAKLKEKYEKDVVDCKLKGKF----YGAKRPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  192 bits (487), Expect = 8e-49
 Identities = 98/169 (57%), Positives = 118/169 (69%), Gaps = 14/169 (8%)

Query: 162 RVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGET 221
           +V +NF+EFSKKCSERWK MS KEK KF        ++AKADK HY +E+K Y P KG  
Sbjct: 33  KVPINFAEFSKKCSERWKTMSKKEKSKFN-------ELAKADKVHYDQEIKDYGPAKGGK 85

Query: 222 KKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYE 281
           KK   DPNAPKRPPS FFL+ SE+ PK K   PG+  GDVAKKLGEMW N    +KQPY 
Sbjct: 86  KK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYI 142

Query: 282 KRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDE 330
            ++AKLKEKYEKD+A Y++KGK D A       AK  +KK EEE+E++E
Sbjct: 143 TQAAKLKEKYEKDVAVYKSKGKSDGAKG----PAKVAQKKVEEEDEDEE 187



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 227 DPNAPKRPPSA--FFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284
           DP  PK   SA  FF+       K K  +  ++F + +KK  E W   +  +K  + + +
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64

Query: 285 AKLKEKYEKDIAAY-RAKG 302
              K  Y+++I  Y  AKG
Sbjct: 65  KADKVHYDQEIKDYGPAKG 83


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  192 bits (487), Expect = 8e-49
 Identities = 98/169 (57%), Positives = 118/169 (69%), Gaps = 14/169 (8%)

Query: 162 RVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGET 221
           +V +NF+EFSKKCSERWK MS KEK KF        ++AKADK HY +E+K Y P KG  
Sbjct: 33  KVPINFAEFSKKCSERWKTMSKKEKSKFN-------ELAKADKVHYDQEIKDYGPAKGGK 85

Query: 222 KKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYE 281
           KK   DPNAPKRPPS FFL+ SE+ PK K   PG+  GDVAKKLGEMW N    +KQPY 
Sbjct: 86  KK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYI 142

Query: 282 KRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDE 330
            ++AKLKEKYEKD+A Y++KGK D A       AK  +KK EEE+E++E
Sbjct: 143 TQAAKLKEKYEKDVAVYKSKGKSDGAKG----PAKVAQKKVEEEDEDEE 187



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 227 DPNAPKRPPSA--FFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284
           DP  PK   SA  FF+       K K  +  ++F + +KK  E W   +  +K  + + +
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64

Query: 285 AKLKEKYEKDIAAY-RAKG 302
              K  Y+++I  Y  AKG
Sbjct: 65  KADKVHYDQEIKDYGPAKG 83


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  187 bits (475), Expect = 2e-47
 Identities = 100/177 (56%), Positives = 126/177 (71%), Gaps = 11/177 (6%)

Query: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222
           V VNF EFSKKCSE+ K MS KEK KF       ++MAK DK HY +EMK   P +G  K
Sbjct: 34  VPVNFVEFSKKCSEKRKTMSGKEKTKF-------DEMAKVDKVHYDQEMKDNGPVEGGKK 86

Query: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282
           K   DPNA KRP S FFL+ SE+ PKIK   PG+S GD+AKKLGEMW N +  +KQPY  
Sbjct: 87  K---DPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYIT 143

Query: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDE 339
           ++A LKEKYEKD+A Y++KGK D+A  G  K A  K K++++E+EE+EE+EEE+K+E
Sbjct: 144 KAADLKEKYEKDVADYKSKGKFDSA-KGPTKIAWKKVKEKDKEDEEEEEEEEEKKEE 199


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  187 bits (475), Expect = 2e-47
 Identities = 100/177 (56%), Positives = 126/177 (71%), Gaps = 11/177 (6%)

Query: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222
           V VNF EFSKKCSE+ K MS KEK KF       ++MAK DK HY +EMK   P +G  K
Sbjct: 34  VPVNFVEFSKKCSEKRKTMSGKEKTKF-------DEMAKVDKVHYDQEMKDNGPVEGGKK 86

Query: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282
           K   DPNA KRP S FFL+ SE+ PKIK   PG+S GD+AKKLGEMW N +  +KQPY  
Sbjct: 87  K---DPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYIT 143

Query: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDE 339
           ++A LKEKYEKD+A Y++KGK D+A  G  K A  K K++++E+EE+EE+EEE+K+E
Sbjct: 144 KAADLKEKYEKDVADYKSKGKFDSA-KGPTKIAWKKVKEKDKEDEEEEEEEEEKKEE 199


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
           sapiens]
          Length = 201

 Score =  187 bits (475), Expect = 2e-47
 Identities = 100/177 (56%), Positives = 126/177 (71%), Gaps = 11/177 (6%)

Query: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222
           V VNF EFSKKCSE+ K MS KEK KF       ++MAK DK HY +EMK   P +G  K
Sbjct: 34  VPVNFVEFSKKCSEKRKTMSGKEKTKF-------DEMAKVDKVHYDQEMKDNGPVEGGKK 86

Query: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282
           K   DPNA KRP S FFL+ SE+ PKIK   PG+S GD+AKKLGEMW N +  +KQPY  
Sbjct: 87  K---DPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYIT 143

Query: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDE 339
           ++A LKEKYEKD+A Y++KGK D+A  G  K A  K K++++E+EE+EE+EEE+K+E
Sbjct: 144 KAADLKEKYEKDVADYKSKGKFDSA-KGPTKIAWKKVKEKDKEDEEEEEEEEEKKEE 199


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  187 bits (474), Expect = 2e-47
 Identities = 102/172 (59%), Positives = 119/172 (69%), Gaps = 15/172 (8%)

Query: 160 KVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKG 219
           K +  VNF+EFSKKCSERWK MS KEK KF       ++MAK DK H  REMK   P KG
Sbjct: 28  KKKNPVNFAEFSKKCSERWKTMSGKEKSKF-------DEMAKTDKVHCDREMKG--PAKG 78

Query: 220 ETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQP 279
             KKK  DP+APKRPPS FFL+ SE  PKIK   PG+S GDVAKKLGEMWNN    +KQP
Sbjct: 79  GKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 136

Query: 280 YEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEE 331
           Y  ++AKLKEKYEKD+A  ++KGK D    G  + AK   KK EEE+E++EE
Sbjct: 137 YITKTAKLKEKYEKDVADSKSKGKFD----GSKRPAKVAWKKVEEEDEDEEE 184


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  187 bits (474), Expect = 2e-47
 Identities = 102/172 (59%), Positives = 119/172 (69%), Gaps = 15/172 (8%)

Query: 160 KVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKG 219
           K +  VNF+EFSKKCSERWK MS KEK KF       ++MAK DK H  REMK   P KG
Sbjct: 28  KKKNPVNFAEFSKKCSERWKTMSGKEKSKF-------DEMAKTDKVHCDREMKG--PAKG 78

Query: 220 ETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQP 279
             KKK  DP+APKRPPS FFL+ SE  PKIK   PG+S GDVAKKLGEMWNN    +KQP
Sbjct: 79  GKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 136

Query: 280 YEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEE 331
           Y  ++AKLKEKYEKD+A  ++KGK D    G  + AK   KK EEE+E++EE
Sbjct: 137 YITKTAKLKEKYEKDVADSKSKGKFD----GSKRPAKVAWKKVEEEDEDEEE 184


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score =  187 bits (474), Expect = 2e-47
 Identities = 102/172 (59%), Positives = 119/172 (69%), Gaps = 15/172 (8%)

Query: 160 KVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKG 219
           K +  VNF+EFSKKCSERWK MS KEK KF       ++MAK DK H  REMK   P KG
Sbjct: 28  KKKNPVNFAEFSKKCSERWKTMSGKEKSKF-------DEMAKTDKVHCDREMKG--PAKG 78

Query: 220 ETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQP 279
             KKK  DP+APKRPPS FFL+ SE  PKIK   PG+S GDVAKKLGEMWNN    +KQP
Sbjct: 79  GKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 136

Query: 280 YEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEE 331
           Y  ++AKLKEKYEKD+A  ++KGK D    G  + AK   KK EEE+E++EE
Sbjct: 137 YITKTAKLKEKYEKDVADSKSKGKFD----GSKRPAKVAWKKVEEEDEDEEE 184


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score =  180 bits (456), Expect = 3e-45
 Identities = 98/163 (60%), Positives = 113/163 (69%), Gaps = 15/163 (9%)

Query: 169 EFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDP 228
           EFSKKCSERWK MS KEK KF       ++MAK DK H  REMK   P KG  KKK  DP
Sbjct: 19  EFSKKCSERWKTMSGKEKSKF-------DEMAKTDKVHCDREMKG--PAKGGKKKK--DP 67

Query: 229 NAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLK 288
           +APKRPPS FFL+ SE  PKIK   PG+S GDVAKKLGEMWNN    +KQPY  ++AKLK
Sbjct: 68  SAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLK 127

Query: 289 EKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEE 331
           EKYEKD+A  ++KGK D    G  + AK   KK EEE+E++EE
Sbjct: 128 EKYEKDVADSKSKGKFD----GSKRPAKVAWKKVEEEDEDEEE 166


>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  179 bits (455), Expect = 4e-45
 Identities = 88/125 (70%), Positives = 98/125 (78%), Gaps = 1/125 (0%)

Query: 201 KADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGD 260
           K D AHY+REMK YIPPK ETK KF+DPNAPK PP AFF++ SE  PKIK E PGLS  D
Sbjct: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92

Query: 261 VAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKK 320
           VAKKLGEMWN  A DDK PYEK++ KLKEKYEKDIAA+  KGK DAA  G +KA K KKK
Sbjct: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152

Query: 321 KEEEE 325
           KEE++
Sbjct: 153 KEEDK 157


>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  179 bits (455), Expect = 4e-45
 Identities = 88/125 (70%), Positives = 98/125 (78%), Gaps = 1/125 (0%)

Query: 201 KADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGD 260
           K D AHY+REMK YIPPK ETK KF+DPNAPK PP AFF++ SE  PKIK E PGLS  D
Sbjct: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92

Query: 261 VAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKK 320
           VAKKLGEMWN  A DDK PYEK++ KLKEKYEKDIAA+  KGK DAA  G +KA K KKK
Sbjct: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152

Query: 321 KEEEE 325
           KEE++
Sbjct: 153 KEEDK 157


>gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 227

 Score =  166 bits (421), Expect = 3e-41
 Identities = 95/180 (52%), Positives = 113/180 (62%), Gaps = 24/180 (13%)

Query: 146 SHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKA 205
           SHCSTLSSIETAPG+VR      +     S   K  S+ +             M ++   
Sbjct: 29  SHCSTLSSIETAPGQVRAKQALGD-----SALLKKKSSTQ-------------MLQSTSQ 70

Query: 206 HYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKL 265
            + R  +     + ETK KF+DPNAPK PP AFF++ SE  PKIK E PGLS  DVAKKL
Sbjct: 71  SFLRSAQ-----RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKL 124

Query: 266 GEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEE 325
           GEMWN  A DDK PYEK++ KLKEKYEKDIAA+  KGK DAA  G +KA K KKKKEE++
Sbjct: 125 GEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184


>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
          Length = 186

 Score =  112 bits (280), Expect = 8e-25
 Identities = 58/136 (42%), Positives = 84/136 (61%), Gaps = 11/136 (8%)

Query: 165 VNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKK 224
           V F EFS+KCSE+W+++S  EK K+       E +AK DKA Y+ EM  Y+   G+ KK+
Sbjct: 36  VGFKEFSRKCSEKWRSISKHEKAKY-------EALAKLDKARYQEEMMNYV---GKRKKR 85

Query: 225 FK-DPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283
            K DP  P+RPPS+F L+  ++  ++K E P  S   VAK  G+MW+     +K PYE+R
Sbjct: 86  RKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPYEQR 145

Query: 284 SAKLKEKYEKDIAAYR 299
            A L+ KY +++  YR
Sbjct: 146 VALLRAKYFEELELYR 161



 Score = 36.6 bits (83), Expect = 0.053
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 231 PKRPPSAFFLYFSEYGPKIKGERPG--LSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLK 288
           PK   S++  +   Y  K K ++P   + F + ++K  E W + +  +K  YE  +   K
Sbjct: 9   PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68

Query: 289 EKYEKDIAAYRAKGK 303
            +Y++++  Y  K K
Sbjct: 69  ARYQEEMMNYVGKRK 83


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 31/196 (15%)

Query: 182 SAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLY 241
           S+  +G   R   K + + KA  A  ++  K     K    KK KDPNAPKRP SA+ L+
Sbjct: 503 SSSNEGDSDRDEKKRKQLKKAKMAKDRKSRK-----KPVEVKKGKDPNAPKRPMSAYMLW 557

Query: 242 FSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAK 301
            +    KIK + PG+S  D++KK GE+W   + + K+ +++++   +  YEK +  Y   
Sbjct: 558 LNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYEG- 616

Query: 302 GKHDAANNGVVKAAKSKKKKEEEEN-------------------------EEDEEDEEEE 336
           G+ +++     K  K  K K E+++                           DE    E 
Sbjct: 617 GRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESFKSKEFVSSDESSSGEN 676

Query: 337 KDEEDEDEEDDEDEED 352
           K ++     +D +EE+
Sbjct: 677 KSKKKRRRSEDSEEEE 692



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 46/209 (22%)

Query: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199
           P RP  ++   L++           ++ ++ SKK  E WK MS ++K ++ R   K ED 
Sbjct: 547 PKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDR---KAED- 602

Query: 200 AKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFG 259
           A+ D   Y++ MK Y   +GE+ K+ K     K               K+K E+      
Sbjct: 603 ARRD---YEKAMKEYEGGRGESSKRDKSKKKKK--------------VKVKMEK------ 639

Query: 260 DVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKK 319
              K      +++ +  +Q  E  S K KE    D +   + G++           KSKK
Sbjct: 640 ---KSTPSRGSSSKSSSRQLSE--SFKSKEFVSSDES---SSGEN-----------KSKK 680

Query: 320 KKEEEENEEDEEDEEEEKDEEDEDEEDDE 348
           K+   E+ E+EE        ED     DE
Sbjct: 681 KRRRSEDSEEEELASTPPSSEDSASGSDE 709



 Score = 29.3 bits (64), Expect = 8.4
 Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 22/167 (13%)

Query: 249 IKGERPGLSFGDVAKKLGEMWNNTAADDKQP-YEKRSAKLKEKYEKDIAAYRAKGKHDAA 307
           I+ E  G  F  V  K   + N    +   P Y++ +   +++++  +   + +GK    
Sbjct: 406 IEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREE 465

Query: 308 NNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDEDEEDGDDEQSHWQLFLACC 367
           N         ++  E     E+EED  EE D          + +   DE+   QL  A  
Sbjct: 466 NANDSSDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKM 525

Query: 368 PEDQRRLVPQCPANARAIACKTPVSFPPLSFLSAKEGSDLNAVGRPL 414
            +D++             + K PV          K+G D NA  RP+
Sbjct: 526 AKDRK-------------SRKKPV--------EVKKGKDPNAPKRPM 551


>gi|7662322 thymus high mobility group box protein TOX [Homo
           sapiens]
          Length = 526

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 37/84 (44%), Positives = 55/84 (65%)

Query: 217 PKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADD 276
           PK   KKK KDPN P++P SA+ L+F +    IKG+ P  +FG+V+K +  MW+    + 
Sbjct: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306

Query: 277 KQPYEKRSAKLKEKYEKDIAAYRA 300
           KQ Y+K++   K++Y K +AAYRA
Sbjct: 307 KQVYKKKTEAAKKEYLKQLAAYRA 330


>gi|226246533 TOX high mobility group box family member 3 isoform 2
           [Homo sapiens]
          Length = 571

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 36/84 (42%), Positives = 56/84 (66%)

Query: 217 PKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADD 276
           PK   KKK KDPN P++P SA+ L+F +    IKG+ P  +FG+V+K +  MW++   + 
Sbjct: 236 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ 295

Query: 277 KQPYEKRSAKLKEKYEKDIAAYRA 300
           KQ Y++++   K++Y K +AAYRA
Sbjct: 296 KQVYKRKTEAAKKEYLKALAAYRA 319


>gi|226054295 TOX high mobility group box family member 3 isoform 1
           [Homo sapiens]
          Length = 576

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 36/84 (42%), Positives = 56/84 (66%)

Query: 217 PKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADD 276
           PK   KKK KDPN P++P SA+ L+F +    IKG+ P  +FG+V+K +  MW++   + 
Sbjct: 241 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ 300

Query: 277 KQPYEKRSAKLKEKYEKDIAAYRA 300
           KQ Y++++   K++Y K +AAYRA
Sbjct: 301 KQVYKRKTEAAKKEYLKALAAYRA 324


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.134    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,775,886
Number of Sequences: 37866
Number of extensions: 1279792
Number of successful extensions: 51191
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 311
Number of HSP's that attempted gapping in prelim test: 14192
Number of HSP's gapped (non-prelim): 15296
length of query: 487
length of database: 18,247,518
effective HSP length: 106
effective length of query: 381
effective length of database: 14,233,722
effective search space: 5423048082
effective search space used: 5423048082
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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