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Search of human proteins with 239749959
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749959 PREDICTED: hypothetical protein [Homo sapiens]
(959 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749959 PREDICTED: hypothetical protein [Homo sapiens] 1991 0.0
gi|19924097 synapsin I isoform Ib [Homo sapiens] 47 9e-05
gi|122937321 UNC homeobox [Homo sapiens] 46 2e-04
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 44 6e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 0.001
gi|19924099 synapsin I isoform Ia [Homo sapiens] 44 0.001
gi|163965366 nascent polypeptide-associated complex alpha subuni... 42 0.002
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 42 0.003
gi|110832843 TBP-associated factor 4 [Homo sapiens] 42 0.004
gi|118402590 myosin XV [Homo sapiens] 41 0.005
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 40 0.008
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 40 0.008
gi|40787999 single-stranded DNA binding protein 2 [Homo sapiens] 40 0.010
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 40 0.010
gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo ... 39 0.018
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 39 0.023
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 39 0.023
gi|154090979 hypothetical protein LOC57481 [Homo sapiens] 39 0.023
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens] 39 0.030
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.030
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens] 39 0.030
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens] 39 0.030
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens] 38 0.040
gi|58331144 proline rich region 18 [Homo sapiens] 38 0.040
gi|13899269 SRY-box 7 [Homo sapiens] 38 0.052
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 38 0.052
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 38 0.052
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 38 0.052
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 38 0.052
>gi|239749959 PREDICTED: hypothetical protein [Homo sapiens]
Length = 959
Score = 1991 bits (5157), Expect = 0.0
Identities = 959/959 (100%), Positives = 959/959 (100%)
Query: 1 MHIWKYLLPSVGMEISQPRGRKGRRRALSLHYGSGRSCVLMTPALGGLSAVQGALRPLVL 60
MHIWKYLLPSVGMEISQPRGRKGRRRALSLHYGSGRSCVLMTPALGGLSAVQGALRPLVL
Sbjct: 1 MHIWKYLLPSVGMEISQPRGRKGRRRALSLHYGSGRSCVLMTPALGGLSAVQGALRPLVL 60
Query: 61 LPLLWPLGPVAKALVLIQFRGLRGLQAEAEGSRGELRTGRLLPPLPRAHTHLTAPAQALD 120
LPLLWPLGPVAKALVLIQFRGLRGLQAEAEGSRGELRTGRLLPPLPRAHTHLTAPAQALD
Sbjct: 61 LPLLWPLGPVAKALVLIQFRGLRGLQAEAEGSRGELRTGRLLPPLPRAHTHLTAPAQALD 120
Query: 121 SKLLTWRKWNKRGQKEGKHYWKNSPAQPRRPPGPKEEASQPGRQVGRGSHLLLRPLGDMA 180
SKLLTWRKWNKRGQKEGKHYWKNSPAQPRRPPGPKEEASQPGRQVGRGSHLLLRPLGDMA
Sbjct: 121 SKLLTWRKWNKRGQKEGKHYWKNSPAQPRRPPGPKEEASQPGRQVGRGSHLLLRPLGDMA 180
Query: 181 ASLLVLGLKLPVSLMLALLVDGLLLVLHAPLSNVVPTWAGATAGTQREGPSQPGIQPPAP 240
ASLLVLGLKLPVSLMLALLVDGLLLVLHAPLSNVVPTWAGATAGTQREGPSQPGIQPPAP
Sbjct: 181 ASLLVLGLKLPVSLMLALLVDGLLLVLHAPLSNVVPTWAGATAGTQREGPSQPGIQPPAP 240
Query: 241 LPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWLTSPSQTHHPWGCRE 300
LPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWLTSPSQTHHPWGCRE
Sbjct: 241 LPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWLTSPSQTHHPWGCRE 300
Query: 301 DMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPLPSPRMGVSFGASLSLSFPVCKMGGPREL 360
DMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPLPSPRMGVSFGASLSLSFPVCKMGGPREL
Sbjct: 301 DMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPLPSPRMGVSFGASLSLSFPVCKMGGPREL 360
Query: 361 MTWLGLQPLNPQEPGVGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGP 420
MTWLGLQPLNPQEPGVGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGP
Sbjct: 361 MTWLGLQPLNPQEPGVGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGP 420
Query: 421 KAATPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPS 480
KAATPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPS
Sbjct: 421 KAATPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPS 480
Query: 481 HKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCL 540
HKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCL
Sbjct: 481 HKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCL 540
Query: 541 LPRSTGTGPEPGPTRFQCLLSAACSPGAAVGAGPAGRMLMAEPLVTRGGGNRLGEGTTLA 600
LPRSTGTGPEPGPTRFQCLLSAACSPGAAVGAGPAGRMLMAEPLVTRGGGNRLGEGTTLA
Sbjct: 541 LPRSTGTGPEPGPTRFQCLLSAACSPGAAVGAGPAGRMLMAEPLVTRGGGNRLGEGTTLA 600
Query: 601 QHLQVDKARAPSLALRSLPLRSQAESLGLGERCEQVTVQPAVQVGRRERVTVQSVVQVGW 660
QHLQVDKARAPSLALRSLPLRSQAESLGLGERCEQVTVQPAVQVGRRERVTVQSVVQVGW
Sbjct: 601 QHLQVDKARAPSLALRSLPLRSQAESLGLGERCEQVTVQPAVQVGRRERVTVQSVVQVGW 660
Query: 661 CEWVTVQPAVQVGRCERVTVQPAVRVGRCEQATAQPAVQPSWVSVDSSACQPTRKKTSFC 720
CEWVTVQPAVQVGRCERVTVQPAVRVGRCEQATAQPAVQPSWVSVDSSACQPTRKKTSFC
Sbjct: 661 CEWVTVQPAVQVGRCERVTVQPAVRVGRCEQATAQPAVQPSWVSVDSSACQPTRKKTSFC 720
Query: 721 FPGKLPDASDPLPRAGGRGPPQGSWVQTSGLDHRKVSALFPEQSWAPLGALRAICPSVEH 780
FPGKLPDASDPLPRAGGRGPPQGSWVQTSGLDHRKVSALFPEQSWAPLGALRAICPSVEH
Sbjct: 721 FPGKLPDASDPLPRAGGRGPPQGSWVQTSGLDHRKVSALFPEQSWAPLGALRAICPSVEH 780
Query: 781 CTSSRWCLALARRAGTDVPTQPSASPGLCLASTPLTALGVPSVAPRTCTQVGFGSKKSEM 840
CTSSRWCLALARRAGTDVPTQPSASPGLCLASTPLTALGVPSVAPRTCTQVGFGSKKSEM
Sbjct: 781 CTSSRWCLALARRAGTDVPTQPSASPGLCLASTPLTALGVPSVAPRTCTQVGFGSKKSEM 840
Query: 841 QTPHTYQTHSNVTATKDTDTGQFPIRHLSSPPSMQLKDYAPVDTAQGAGRRRRPLPQQLF 900
QTPHTYQTHSNVTATKDTDTGQFPIRHLSSPPSMQLKDYAPVDTAQGAGRRRRPLPQQLF
Sbjct: 841 QTPHTYQTHSNVTATKDTDTGQFPIRHLSSPPSMQLKDYAPVDTAQGAGRRRRPLPQQLF 900
Query: 901 PLLSTRVTRSLRHQPVVWAPQGAGRSLEWVYVLWLSVLSGAASEPPPPAKFHFPLPAAG 959
PLLSTRVTRSLRHQPVVWAPQGAGRSLEWVYVLWLSVLSGAASEPPPPAKFHFPLPAAG
Sbjct: 901 PLLSTRVTRSLRHQPVVWAPQGAGRSLEWVYVLWLSVLSGAASEPPPPAKFHFPLPAAG 959
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 47.0 bits (110), Expect = 9e-05
Identities = 66/224 (29%), Positives = 79/224 (35%), Gaps = 37/224 (16%)
Query: 371 PQEPGVGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLW 430
P +PG G RQG P P QG + +SGL GP A +P
Sbjct: 467 PPQPGPGPQRQGP-------------PLQQRPPPQGQQH----LSGL-GPPAGSP----- 503
Query: 431 LEAWLPP---APSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPSHKARTPQ 487
L LP AP PA QAA P P A + A P +A PQ
Sbjct: 504 LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP-PASPSPQRQAGPPQ 562
Query: 488 LDKGLLLPSAQPP--SGQVPREFKGTGP--YATNPLADHRKSTGTGPEP--GPTRLQCLL 541
+ + PP SG P + GP P R+++ GP P GP Q
Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQ--Q 620
Query: 542 PRSTGTGP--EPGPTRFQCLLSAACSPGAAVGAGPAGRMLMAEP 583
PR +G GP P P Q P A GP L A P
Sbjct: 621 PRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASP 664
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 45.8 bits (107), Expect = 2e-04
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 467 AQGYKALSAGLVPSHKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLADHRKST 526
+QG S G + H A + D G S +PP P KG G +A+
Sbjct: 214 SQGRHLHSPGGLSLHSAPSSDSDSGGGGLSPEPPEPPPPAA-KGPGAHASGAAGTAPAPP 272
Query: 527 GTGPEPGPTRLQCLLPRSTGTGPEPGPTRFQCLLSAACSPGAAVGAGPAG 576
G P PG + +G GP+P P R +A+C PGAAV A G
Sbjct: 273 GEPPAPGTCDPAFYPSQRSGAGPQPRPGRPADKDAASCGPGAAVAAVERG 322
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 44.3 bits (103), Expect = 6e-04
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 457 QEPQRSLDQAAQGYKALSAGLVPSHKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYAT 516
Q+PQR Q +G +A A LVP+ A PQ +LP+A+P + + + G G A
Sbjct: 28 QQPQRVPGQRGRGARA--APLVPAASASAPQRGPSGILPAAEPTICSLHQAWGGPGCRAQ 85
Query: 517 NPLADHRKSTGTG----PEPGPTRLQCLLPRSTGTGPEPGPTRFQCLLSAACSPGAAVG 571
+ S G G P PGP ++ LP S GP PGP + + A PG G
Sbjct: 86 KGI-PAALSPGPGPIPAPIPGPAQIPGPLPGSI-PGPIPGPAQIPSPIPAPI-PGPISG 141
Score = 30.8 bits (68), Expect = 6.3
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 10/141 (7%)
Query: 202 GLLLVLHAPLSNVVPTWAGATAGTQREGPS--QPGIQP-PAPLPQHRDLPTVAPSSQALF 258
G+L + ++ W G Q+ P+ PG P PAP+P +P P S
Sbjct: 61 GILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGP 120
Query: 259 LTPPHHVCLWSSGVPSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVC-PWAGTS-- 315
+ P + S +P+ GP + P + P + P++G +
Sbjct: 121 IPGPAQI---PSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPG 177
Query: 316 -FPGDSPVYVPGCCGHPLPSP 335
PG +P +PG P+P P
Sbjct: 178 PIPGPNPGPIPGPISGPIPGP 198
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.5 bits (101), Expect = 0.001
Identities = 99/378 (26%), Positives = 122/378 (32%), Gaps = 63/378 (16%)
Query: 210 PLSNVVPTWAGATA-GTQREG--PSQP------GIQPPAPLPQHRDL-PTVAPSSQALFL 259
PLS+ P +G +A GT R PSQP ++PP P +D P + P S +
Sbjct: 248 PLSS--PARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA 305
Query: 260 TPPHHVCLWSSGVPSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGD 319
TP L S P+L +P S LT T P
Sbjct: 306 TPSPSAALQSQAPPTLPA--TPHSSSLTCQLATPLP--------------------LAPP 343
Query: 320 SPVYVPGCCGHPLPSPRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGKT 379
SP P LPSP A+ SL P + ++L PL+P T
Sbjct: 344 SPSAPPSL--QTLPSPPATPPSQATTSLGSPTLQA-----THSFLPSPPLSPLA-----T 391
Query: 380 RQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAP 439
Q P + L P P P L P+A L+A P P
Sbjct: 392 PPPQAPPALAL------PPLQAPPSPPAS-PPLSPLATPSPQAPNALAVHLLQAPFSPPP 444
Query: 440 SGPAQQAASPFLPHWPHQEPQRS-LDQAAQGYKALSAGLVPSHKARTPQLDKGLLLPSAQ 498
S P Q SP P P P + QA A + PS A P P A
Sbjct: 445 SPPVQAPFSP--PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 502
Query: 499 PPSGQVPREFKGTGP-----YATNPLADHRKSTGTGPEPGPTRLQCLLPRSTGTGPEP-- 551
PP P + P AT PL + P P LP S P P
Sbjct: 503 PPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA 562
Query: 552 GPTRFQCLLSAACSPGAA 569
P LL SP A+
Sbjct: 563 PPVLAAPLLQVPPSPPAS 580
Score = 38.5 bits (88), Expect = 0.030
Identities = 82/345 (23%), Positives = 105/345 (30%), Gaps = 46/345 (13%)
Query: 220 GATAGTQREGP-SQPGIQPPAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATG 278
G +GT R GP Q G++ A R T AP AL + G PS A
Sbjct: 118 GRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMA 177
Query: 279 PSPKLSW----LTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPLPS 334
+ + L P+ + P E P S + P PS
Sbjct: 178 RRSRAAGTEVGLPRPAPSARPRPPTEG--------PRKSVSSASEHSTTEPSPAARRRPS 229
Query: 335 PRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGKTR--QGQRPEEVL--- 389
G+ AS SLS + P P P P K + Q RP +V
Sbjct: 230 AGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR 289
Query: 390 ---------LLNDGLCPKTDFQPCQGGGYPTLRISGLDGP---KAATPFWTLWLEAWLPP 437
L + L + Q PTL + + ATP PP
Sbjct: 290 KDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPL------PLAPP 343
Query: 438 APSGPAQQAASPFLPHWPHQEPQRSLD----QAAQGYKALSAGLVPSHKARTPQLDKGLL 493
+PS P P P P + SL QA + L + + PQ L
Sbjct: 344 SPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSF--LPSPPLSPLATPPPQAPPALA 401
Query: 494 LPSAQ----PPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGP 534
LP Q PP+ P A N LA H P P P
Sbjct: 402 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 446
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 43.5 bits (101), Expect = 0.001
Identities = 81/330 (24%), Positives = 104/330 (31%), Gaps = 46/330 (13%)
Query: 220 GATAGTQREGP-SQPGIQPPAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATG 278
G +GT R GP Q G++ A R T AP AL + G PS A
Sbjct: 109 GRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMA 168
Query: 279 PSPKLSW----LTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPLPS 334
+ + L P+ + P E P S + P PS
Sbjct: 169 RRSRAAGTEVGLPRPAPSARPRPPTEG--------PRKSVSSASEHSTTEPSPAARRRPS 220
Query: 335 PRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGKTR--QGQRPEEVLLLN 392
G+ AS SLS + P P P P K + Q RP +V
Sbjct: 221 AGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTP-- 278
Query: 393 DGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAASPFLP 452
P+ D P G P +++P T A PP+PS P P P
Sbjct: 279 ----PRKDAAPALG-------------PLSSSPLATPSPSA--PPSPSAPPSLQTLPSPP 319
Query: 453 HWPHQEPQRSLD----QAAQGYKALSAGLVPSHKARTPQLDKGLLLPSAQ----PPSGQV 504
P + SL QA + L + + PQ L LP Q PP+
Sbjct: 320 ATPPSQATTSLGSPTLQATHSF--LPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPP 377
Query: 505 PREFKGTGPYATNPLADHRKSTGTGPEPGP 534
P A N LA H P P P
Sbjct: 378 LSPLATPSPQAPNALAVHLLQAPFSPPPSP 407
Score = 37.7 bits (86), Expect = 0.052
Identities = 92/366 (25%), Positives = 124/366 (33%), Gaps = 41/366 (11%)
Query: 210 PLSNVVPTWAGATA-GTQREG--PSQP------GIQPPAPLPQHRDL-PTVAPSSQALFL 259
PLS+ P +G +A GT R PSQP ++PP P +D P + P S +
Sbjct: 239 PLSS--PARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA 296
Query: 260 TPPHHVCLWSSGVPSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGD 319
TP S PSL T PSP T PSQ G A + +
Sbjct: 297 TPSPSAPPSPSAPPSLQTLPSPP---ATPPSQATTSLGSPTLQATHSFLPSPPLSPLATP 353
Query: 320 SPVYVPGCCGHPLPSPRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGKT 379
P P PL +P + L+ P P L L P +P P
Sbjct: 354 PPQAPPALALPPLQAPPSPPASPPLSPLATP--SPQAPNALAVHLLQAPFSP--PPSPPV 409
Query: 380 RQGQRPEEVLLLNDGLCPKTDFQPCQGG----------GYPTLRISGLDGPKAATPFWTL 429
+ P ++ P + P P + S P+A P
Sbjct: 410 QAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 469
Query: 430 WLEAWLPPAPSGPAQQAASPF--LPHWPHQEPQRSLDQAAQGYKALSAGLVPSHKARTPQ 487
L+ PP P P A P LP P P ++ + +S P +A P
Sbjct: 470 PLQLAKPP-PQAPPALATPPLQALPSPPASFPGQA-PFSPSASLPMSPLATPPPQA-PPV 526
Query: 488 LDKGLLLPSAQPPSG---QVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLPRS 544
L LL PP+ Q PR GP + + GP P P+R P S
Sbjct: 527 LAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR----SPSS 582
Query: 545 TGTGPE 550
T +GP+
Sbjct: 583 TLSGPD 588
Score = 36.2 bits (82), Expect = 0.15
Identities = 79/309 (25%), Positives = 98/309 (31%), Gaps = 36/309 (11%)
Query: 273 PSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHP- 331
P+ + P PK P Q P R+D A + P + + SP P P
Sbjct: 257 PAHPSQPKPKGLQALRPPQVTPP---RKDAAPA--LGPLSSSPLATPSPSAPPSPSAPPS 311
Query: 332 ---LPSPRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGKTRQGQRPEEV 388
LPSP A+ SL P + ++L PL+P T Q P +
Sbjct: 312 LQTLPSPPATPPSQATTSLGSPTLQA-----THSFLPSPPLSPLA-----TPPPQAPPAL 361
Query: 389 LLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAAS 448
L P P P L P+A L+A P PS P Q S
Sbjct: 362 AL------PPLQAPPSPPAS-PPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 414
Query: 449 PFLPHWPHQEPQRS-LDQAAQGYKALSAGLVPSHKARTPQLDKGLLLPSAQPPSGQVPRE 507
P P P P + QA A + PS A P P A PP P +
Sbjct: 415 P--PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 472
Query: 508 FKGTGP-----YATNPLADHRKSTGTGPEPGPTRLQCLLPRSTGTGPEP--GPTRFQCLL 560
P AT PL + P P LP S P P P LL
Sbjct: 473 LAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL 532
Query: 561 SAACSPGAA 569
SP A+
Sbjct: 533 QVPPSPPAS 541
Score = 36.2 bits (82), Expect = 0.15
Identities = 103/417 (24%), Positives = 133/417 (31%), Gaps = 87/417 (20%)
Query: 209 APLSNVVPTWAGATAGTQREGPSQPGIQPPAPLPQHRDL-PTVAPSSQALFLTPPHHVCL 267
+PL+ P A A + P P PP P P V+PS+ PP
Sbjct: 379 SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPP----- 433
Query: 268 WSSGVPSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGC 327
S P L PSP S SPS T P A P + P P P
Sbjct: 434 -SLAAPPLQVPPSPPASPPMSPSATPPP------QAPPPLAAPPLQLAKP---PPQAPPA 483
Query: 328 CGHP----LPSPRMGVSFGA--SLSLSFPVCKMGGPRELMTWLGLQPL--NPQEPGVGKT 379
P LPSP A S S S P+ + P + PL P P T
Sbjct: 484 LATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPT 543
Query: 380 RQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAP 439
Q R P G P +SG P TL L PP P
Sbjct: 544 LQAPRR----------------PPTPG---PDTSVSG--------PRLTLALAPGPPPPP 576
Query: 440 S-GPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPSHKARTPQLDKGLLLPSAQ 498
S P+ + P L H S + +GY + G + + P + P+A
Sbjct: 577 SRSPSSTLSGPDLA--GHSSSATSTPEELRGYDSGPEG--GAAASPPPDAELAACHPAAW 632
Query: 499 PPSGQVPREFKG-----------TGPYATNPLADHRKSTGTGPEPGPTRLQCLLPRSTGT 547
P F+G TGP + + L ++ GPE P +
Sbjct: 633 SRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYET--EGPESATP-----APGALDP 685
Query: 548 GPEPGPTRFQCLLSAACSPGAAVGAGPAGRMLMAEPLVTRGGGNRLGE-GTTLAQHL 603
GP PG ++ A GAG + R P R G LG ++ QHL
Sbjct: 686 GPSPG--------TSGGKAAAGAGAGASSR----SPKQARLGELPLGALQASVVQHL 730
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 43.5 bits (101), Expect = 0.001
Identities = 63/215 (29%), Positives = 76/215 (35%), Gaps = 37/215 (17%)
Query: 371 PQEPGVGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLW 430
P +PG G RQG P P QG + +SGL GP A +P
Sbjct: 467 PPQPGPGPQRQGP-------------PLQQRPPPQGQQH----LSGL-GPPAGSP----- 503
Query: 431 LEAWLPP---APSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPSHKARTPQ 487
L LP AP PA QAA P P A + A P +A PQ
Sbjct: 504 LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP-PASPSPQRQAGPPQ 562
Query: 488 LDKGLLLPSAQPP--SGQVPREFKGTGP--YATNPLADHRKSTGTGPEP--GPTRLQCLL 541
+ + PP SG P + GP P R+++ GP P GP Q
Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQ--Q 620
Query: 542 PRSTGTGP--EPGPTRFQCLLSAACSPGAAVGAGP 574
PR +G GP P P Q P A GP
Sbjct: 621 PRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGP 655
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 42.4 bits (98), Expect = 0.002
Identities = 97/377 (25%), Positives = 124/377 (32%), Gaps = 67/377 (17%)
Query: 210 PLSNVVPTWAGATAGTQREGPSQPGIQ----PPA------------PLPQHRDLPTVA-- 251
PL PT AT + + GP+ P ++ PPA P P+ +P A
Sbjct: 1051 PLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP 1110
Query: 252 PSSQALFLTPPHHVCLWSSGVPS--LATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVC 309
PS + TPPH G P+ AT PSPK T P P G A
Sbjct: 1111 PSPKGGLATPPH------KGAPTTPAATPPSPKGGLATPP-----PKGAPTTPAATP-PS 1158
Query: 310 PWAGTSFPGDSPVYVPGCCGHPLPSPRMGVSFGASLSL-SFPVCKMGGPRELMTWLGLQP 368
P G + P P P PSP+ G++ + + P P+ GL
Sbjct: 1159 PKGGLATP--PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG-----GL-- 1209
Query: 369 LNPQEPGVGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWT 428
P G T P PK G PT + PK P
Sbjct: 1210 ATPSPKGAPTTPAATPPS----------PKGGLATPSPKGAPTTPAATPPSPKGG-PATP 1258
Query: 429 LWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGL-VPSHKARTPQ 487
A PPA + P+ + PH P + +G A S P+ A TP
Sbjct: 1259 PPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPP 1318
Query: 488 LDKGLLLPSAQPPSGQ------VPREFKGTGPY-ATNPLADHRKSTGTGPE----PGPTR 536
KG P PP G P KGT AT P + +T + E P T
Sbjct: 1319 SPKG--SPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATP 1376
Query: 537 LQCLLPRSTGTGPEPGP 553
P T P+ GP
Sbjct: 1377 SHKGGPAMTPPSPKRGP 1393
Score = 37.7 bits (86), Expect = 0.052
Identities = 103/414 (24%), Positives = 142/414 (34%), Gaps = 73/414 (17%)
Query: 207 LHAPLSNVVPTWAGATAGTQREGPSQPGIQPP--APLPQHRDLPTVAPSSQALFLTPPHH 264
L P PT AT + + GP+ P PP AP P PS + TPPH
Sbjct: 1232 LATPSPKGAPTTPAATPPSPKGGPATP---PPKGAPTPP----AATPPSLKGGLATPPHK 1284
Query: 265 VCLWSSGVPSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSP--- 321
+ P++ T PSPK TSP P G A P + PG P
Sbjct: 1285 ----GAPNPAVVTPPSPKGGPATSP-----PKGAPTPPA----ATPPSPKGSPGTPPPKG 1331
Query: 322 ------VYVPGCCGHP-----LPSPRMGVSFGASLSLSFPVC----KMGGPRELMTWLGL 366
V P G P PS + G + +S P GGP +
Sbjct: 1332 APTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGP-------AM 1384
Query: 367 QPLNPQE-PGVGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATP 425
P +P+ P + + V+ L+ P T +G P+ G P A TP
Sbjct: 1385 TPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTR-EGAATPS---KGDLTPPAVTP 1440
Query: 426 FWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPSHKART 485
+A AP G +S P P P + A A S+ P T
Sbjct: 1441 --VSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSS--PKKAPAT 1496
Query: 486 PQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLAD-----HRKSTGT-GPEPG--PTRL 537
P LP+ P S P+E T +P+A +K+ T P+ P +
Sbjct: 1497 PAPMGAPTLPAVIPSS---PKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAM 1553
Query: 538 QCLLPRSTGTGPEP-----GPTRFQCLLSAACSPGAAVGAGPAGRMLMAEPLVT 586
P+ T P P P+ + A +P GA P+ + L+ P VT
Sbjct: 1554 TVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGA-PSPKELLIPPAVT 1606
Score = 35.4 bits (80), Expect = 0.26
Identities = 105/460 (22%), Positives = 150/460 (32%), Gaps = 92/460 (20%)
Query: 144 SPAQPRRPPGPKEEASQ------PGRQVGRGSHLLLRPL---------------GDMAAS 182
+P P+ PP PK+ A+ P G+ L + +A +
Sbjct: 1471 TPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPT 1530
Query: 183 LLVLGLKLPVSLM-LALLVDGLLLVLHAPLSNVVPTWAGATA-GTQREGPSQPGIQPP-- 238
+L K P +L L+ + V + +PT A A + +E S P + P
Sbjct: 1531 ATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTY 1590
Query: 239 --APLPQHRDLPTV--------APSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWLTS 288
AP P+ +P AP+ A +TPP G + A +P +T
Sbjct: 1591 KGAPSPKELLIPPAVTSPSPKEAPTPPA--VTPPSP----EKGPATPAPKGTPTSPPVTP 1644
Query: 289 PSQTHHPWGCREDMAEQKRVCPWAGTSFPG-DSPVYVPGCCGHPLPS--------PRMGV 339
S P + P A P P + P P R G
Sbjct: 1645 SSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGP 1704
Query: 340 SFGASLSLSFPVC----KMGGPRELMTWLGLQPLNPQEPGVGKTRQGQRPEEVLLLNDGL 395
S + S P+C G + ++ + PL P + KT +G+
Sbjct: 1705 QTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASH-------- 1756
Query: 396 CPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAASP--FLPH 453
PK P + KA+TP E LP S A SP LP
Sbjct: 1757 SPKGPLAPPES--------------KASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPL 1802
Query: 454 WPHQEPQRSLDQAAQGYKALSAGLV---PSHKARTPQLDKGLLLPSAQPPSGQVPREFKG 510
P P Q + S GLV PS D+ L L +P SG VP F+
Sbjct: 1803 APSPVPTL---PPKQQFLPSSPGLVLESPSKPLAPADEDELLPLIPPEPISGGVP--FQS 1857
Query: 511 TGPYATNPLADHRKSTGTGPEPGPTRLQCLLPRSTGTGPE 550
P KS G P P P+ Q + + G+G E
Sbjct: 1858 VLVNMPTP-----KSAGI-PVPTPSAKQPVTKNNKGSGTE 1891
Score = 34.7 bits (78), Expect = 0.44
Identities = 44/159 (27%), Positives = 52/159 (32%), Gaps = 20/159 (12%)
Query: 419 GPKAATPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLV 478
GP +P W A PP+P G + P P P G S
Sbjct: 953 GPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATP----PSPKGGPATPSPKGA 1008
Query: 479 PSHKARTPQLDKGLLLPSAQP-PSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRL 537
P+ A TP KG P+A P P G T P AT P + P+ PT
Sbjct: 1009 PTPPAVTPPSPKG--SPAATPFPKG------ASTPPAATPPSPKGSPAATPLPKGAPTTP 1060
Query: 538 QCLLPRSTGTGPEPGPTRFQCLLSAACSPGAAVGAGPAG 576
LP G P L A +P AA P G
Sbjct: 1061 AATLPSPKGGPATPS-------LKGAPTPPAATPPSPKG 1092
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 42.0 bits (97), Expect = 0.003
Identities = 39/138 (28%), Positives = 51/138 (36%), Gaps = 25/138 (18%)
Query: 422 AATPFWTL--WLEAWLPPAPSGPAQQAASPFLP-HWPHQEPQRSLDQAAQGYKALSAGLV 478
A+ FW+ W E LP +P+ PA +SP P P Q Q + G +AL G +
Sbjct: 86 ASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSL 145
Query: 479 PSHKARTPQLDKGLLLPSAQPP-SGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRL 537
P + R P A PP PR F+ P++ P P P P
Sbjct: 146 PEGEPR----------PYALPPRESPAPRPFRWGDPFSPAP-----------PRPQPPSR 184
Query: 538 QCLLPRSTGTGPEPGPTR 555
P S P P R
Sbjct: 185 PAAQPPSRPAFRSPRPVR 202
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 41.6 bits (96), Expect = 0.004
Identities = 127/517 (24%), Positives = 158/517 (30%), Gaps = 93/517 (17%)
Query: 227 REGPSQPGIQPPAPLPQHRDLPTVAPSSQALFLTPPHH----VCLWSSGVPSLATGPSPK 282
R P G Q P P R L P+ A L PP C ++A GP P
Sbjct: 94 RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEP- 152
Query: 283 LSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPLPSPRMGVSFG 342
+P+ P G A + PG P PG P P P G
Sbjct: 153 -----APAGPAKPAG----------PAALAARAGPGPGPGPGPG----PGPGPGKPAGPG 193
Query: 343 ASLSLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGKTRQGQRPEEVLLLNDGLCPKTDFQ 402
A+ +L+ G L L + P V G P +L L P T Q
Sbjct: 194 AAQTLN-------GSAAL-----LNSHHAAAPAVSLVNNG--PAALLPLPKPAAPGTVIQ 239
Query: 403 --PCQGGGYPTLRI--SGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQE 458
P G P S P A P A PP P PA A P P P
Sbjct: 240 TPPFVGAAAPPAPAAPSPPAAPAPAAP------AAAPPPPPPAPATLARPPGHPAGP-PT 292
Query: 459 PQRSLDQAAQGYKALSAGLVPSHKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNP 518
++ A SAG P+ P+A P+G + G A P
Sbjct: 293 AAPAVPPPAAAQNGGSAGAAPAP------------APAAGGPAGVSGQPGPGAAAAAPAP 340
Query: 519 --LADHRKSTGTGPEPGPTRLQCLLPRSTGTGPEPGPTRFQCLLSAACSPGAAVG----- 571
A+ K P L P ST GPT L S A P A G
Sbjct: 341 GVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGL 400
Query: 572 ----AGPAGRMLMAEPLVTRGGGNRLGEGTTLAQHLQVDKARAPSLALRSLP-----LRS 622
AG + L P T G T LA L ++ LP +RS
Sbjct: 401 PKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRS 460
Query: 623 QAESL------GLGERCEQVTVQPAVQVGRRERV-TVQSVVQVGWCEWVTVQPAVQVGRC 675
+ L L + Q QP + R T VQ+ TVQ
Sbjct: 461 ENGQLLMIPQQALAQMQAQAHAQPQTTMAPRPATPTSAPPVQIS-----TVQAPGTPIIA 515
Query: 676 ERVTVQPAVRVGRCEQATAQPAVQPSWVSVDSSACQP 712
+VT ++ + + AQ VQPS S QP
Sbjct: 516 RQVTPTTIIK----QVSQAQTTVQPSATLQRSPGVQP 548
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 41.2 bits (95), Expect = 0.005
Identities = 74/290 (25%), Positives = 94/290 (32%), Gaps = 44/290 (15%)
Query: 227 REGPSQPGIQPPAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWL 286
R S +PPAP P R L S + L+PP SSG P A SP LS L
Sbjct: 634 RARSSNDARRPPAPQPAPRTL-----SHWSALLSPPVPPRPPSSGPPP-APPLSPALSGL 687
Query: 287 TSPSQTHH-------PWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPLPSPRMGV 339
P+ + PW + + WA P SP P P P P
Sbjct: 688 PRPASPYGSLRRHPPPWAAPAHVPPAPQASWWAFVEPPAVSPEVPPDLLAFPGPRPSFRG 747
Query: 340 SFGASLSLSFPVCKMGGPRELMTWLGL---QPLNPQEPGVGKTRQGQRPEEVLLLNDG-- 394
S + FP R W L QP PG+G P L L G
Sbjct: 748 SRRRGAAFGFPGASPRASRR-RAWSPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPF 806
Query: 395 ----LCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAASPF 450
L P + Q P R +G GP + P P P +
Sbjct: 807 QPPFLPPARRPRSLQESPAPR-RAAGRLGPPGS-------------PLPGSPRPPSPPLG 852
Query: 451 LPHWPHQEPQRSLDQAAQGYKALSAGLVPSHKARTPQLDKGLLLPSAQPP 500
L H P + + ++ LS P +A PQ + LP +PP
Sbjct: 853 LCHSPRRSSLNLPSRLPHTWRRLSE---PPTRAVKPQ----VRLPFHRPP 895
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 40.4 bits (93), Expect = 0.008
Identities = 83/335 (24%), Positives = 114/335 (34%), Gaps = 59/335 (17%)
Query: 222 TAGTQREGPSQPGIQPPAPLPQHR-------DLPTVAPSSQALFLTPPHHVCLWSSGVPS 274
TA T E + Q L HR + P V+ S + +P H S+ +P
Sbjct: 1253 TASTSVEQVRERSYQRALLLSDHRKDKDSGGESPCVSCSPSHVQSSPSSH----SNHIPQ 1308
Query: 275 L-ATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTS---FPGDSPVYVPGCCGH 330
L A GP P S L +P CP TS + PG G
Sbjct: 1309 LQAKGPVPSFSELMEDPDPENP------EPTTTNECPSPDTSQNTCKSPPKMSKPGSPGS 1362
Query: 331 PLPSPRMGVSF---GASLSLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGKTRQGQRPEE 387
+P+ G F + + L T L + L+ + K Q
Sbjct: 1363 VIPAQAHGKIFTKPDPQWDSTVSASEAENGVHLKTELQQKQLSNNNQALSKNHPPQT--H 1420
Query: 388 VLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAA 447
V ++ L K P + P+ + + PK++TP T +L P P P+QQ
Sbjct: 1421 VRNSSEQLSQKLPSVPTKLHCPPSPHLE--NPPKSSTPH-TPVQHGYLSPKP--PSQQLG 1475
Query: 448 SPFLPH--------WPHQEPQRSLDQAAQGYKALSAGLVPSHKARTPQLDKGLLLPSAQP 499
SP+ PH P +EPQR+ AAQ A T Q G L Q
Sbjct: 1476 SPYRPHHSQSPQVGTPQREPQRNFYPAAQNL-----------PANTQQATSGTLF--TQT 1522
Query: 500 PSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGP 534
PSGQ + + N ST P P P
Sbjct: 1523 PSGQSSATYSQFNQQSLN-------STAPPPPPPP 1550
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 40.4 bits (93), Expect = 0.008
Identities = 83/335 (24%), Positives = 114/335 (34%), Gaps = 59/335 (17%)
Query: 222 TAGTQREGPSQPGIQPPAPLPQHR-------DLPTVAPSSQALFLTPPHHVCLWSSGVPS 274
TA T E + Q L HR + P V+ S + +P H S+ +P
Sbjct: 1253 TASTSVEQVRERSYQRALLLSDHRKDKDSGGESPCVSCSPSHVQSSPSSH----SNHIPQ 1308
Query: 275 L-ATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTS---FPGDSPVYVPGCCGH 330
L A GP P S L +P CP TS + PG G
Sbjct: 1309 LQAKGPVPSFSELMEDPDPENP------EPTTTNECPSPDTSQNTCKSPPKMSKPGSPGS 1362
Query: 331 PLPSPRMGVSF---GASLSLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGKTRQGQRPEE 387
+P+ G F + + L T L + L+ + K Q
Sbjct: 1363 VIPAQAHGKIFTKPDPQWDSTVSASEAENGVHLKTELQQKQLSNNNQALSKNHPPQT--H 1420
Query: 388 VLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAA 447
V ++ L K P + P+ + + PK++TP T +L P P P+QQ
Sbjct: 1421 VRNSSEQLSQKLPSVPTKLHCPPSPHLE--NPPKSSTPH-TPVQHGYLSPKP--PSQQLG 1475
Query: 448 SPFLPH--------WPHQEPQRSLDQAAQGYKALSAGLVPSHKARTPQLDKGLLLPSAQP 499
SP+ PH P +EPQR+ AAQ A T Q G L Q
Sbjct: 1476 SPYRPHHSQSPQVGTPQREPQRNFYPAAQNL-----------PANTQQATSGTLF--TQT 1522
Query: 500 PSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGP 534
PSGQ + + N ST P P P
Sbjct: 1523 PSGQSSATYSQFNQQSLN-------STAPPPPPPP 1550
>gi|40787999 single-stranded DNA binding protein 2 [Homo sapiens]
Length = 361
Score = 40.0 bits (92), Expect = 0.010
Identities = 45/165 (27%), Positives = 61/165 (36%), Gaps = 21/165 (12%)
Query: 437 PAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKA----LSAGLVPSHKARTPQLDKGL 492
P P G Q SP P P + P R +QA G L +G+ P+ + P + G
Sbjct: 117 PVPPGFFQPFMSPRYPGGP-RPPLRIPNQALGGVPGSQPLLPSGMDPTRQQGHPNM--GG 173
Query: 493 LLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLPRSTGTGPEPG 552
+ PP G VP + G PL G GP G P P
Sbjct: 174 PMQRMTPPRGMVPLGPQNYGGAMRPPLNALGGPGMPGMNMGPG----------GGRPWPN 223
Query: 553 PTRFQCLLSAACSPGAAV----GAGPAGRMLMAEPLVTRGGGNRL 593
PT + ++ SPG V G GP G +M P + G+ +
Sbjct: 224 PTNANSIPYSSASPGNYVGPPGGGGPPGTPIMPSPADSTNSGDNM 268
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 40.0 bits (92), Expect = 0.010
Identities = 108/478 (22%), Positives = 154/478 (32%), Gaps = 121/478 (25%)
Query: 188 LKLPVSLMLALLVDG--LLLVLHAPLSNVVPTWAGATAGTQREGPSQPGIQPPAPLPQHR 245
L +P+S L + G LL + PL+ VVP P P + P
Sbjct: 1455 LTIPISAPLTVSASGPALLTSVTPPLAPVVPA-----------APGPPSLAPSG------ 1497
Query: 246 DLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQ 305
+PS+ AL L + PSL++ +P L +P+ +H P G +A
Sbjct: 1498 ----ASPSASAL--------TLGLATAPSLSSSQTPGHPLLLAPTSSHVP-GLNSTVA-- 1542
Query: 306 KRVCPWAGTSFPGDSPVYVPGCC------GHPLPSPR----MGVSFGASLSLSFPVCKMG 355
P SPV VP P P+P + + AS +L+ P+ M
Sbjct: 1543 -----------PACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMA 1591
Query: 356 GPRELMTWLGLQPLNPQEPGVGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRIS 415
P+ + L P P L P P G P L S
Sbjct: 1592 APQTAI--LAPSPAPP-----------------------LAPLPVLAPSPGAA-PVLASS 1625
Query: 416 GLDGP---KAATPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKA 472
P ++TP +L A P P+ A S P P A+ A
Sbjct: 1626 QTPVPVMAPSSTPGTSL---ASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLA 1682
Query: 473 LSAGLVPSHKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYAT-NPLADHRKSTGTGPE 531
L+ L P+ +P L P G P + P ++ P S GP
Sbjct: 1683 LAPALAPTLGGSSPSQTLSL---GTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPP 1739
Query: 532 PGPTRLQCLLPR-----STGTGPEPGPTRFQCLLSAAC-------------SPGAAVGAG 573
GPT+ L P ++ GP P T S++ SP G
Sbjct: 1740 LGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLG 1799
Query: 574 PAGRMLMA-EPLVTRGGGNRLGE-----------GTTLAQHLQVDKARAPSLALRSLP 619
PA +A P T+ ++ T+ L V K +L LRS P
Sbjct: 1800 PAAAQTLALAPASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRSGP 1857
Score = 32.7 bits (73), Expect = 1.7
Identities = 71/308 (23%), Positives = 96/308 (31%), Gaps = 59/308 (19%)
Query: 152 PGPKEEASQPGRQVGRGSHLLLRPLGDMAASLLVLGLKLPVSLMLALLVDGLLLVLHAPL 211
P P + S L PL MAA + P + L V AP
Sbjct: 1563 PNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPV-------LAPS 1615
Query: 212 SNVVPTWAGATAGTQREGPSQ-PGIQPPAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSS 270
P A + PS PG + P P +APSS L
Sbjct: 1616 PGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTML----------- 1664
Query: 271 GVPSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGH 330
P+P S L SP+ T + +A + P G S P + G
Sbjct: 1665 --------PAPVPSPLPSPAST-------QTLALAPALAPTLGGSSPSQTLSLGTGNPQG 1709
Query: 331 PLPSPRMGVSFGASL------SLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGKTRQGQR 384
P P+ + ++ +SL +LS GP + ++ PL P P G
Sbjct: 1710 PFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASP------VGPA 1763
Query: 385 PEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLD----GPKAATPFWTLWLEAWLPPAPS 440
P L L + P TL +S GP AA A P +
Sbjct: 1764 PAHTLTLAPASSSASLLAP---ASVQTLTLSPAPVPTLGPAAAQTL------ALAPASTQ 1814
Query: 441 GPAQQAAS 448
PA QA+S
Sbjct: 1815 SPASQASS 1822
Score = 32.0 bits (71), Expect = 2.8
Identities = 44/176 (25%), Positives = 62/176 (35%), Gaps = 15/176 (8%)
Query: 700 PSWVSVDSSACQPTRKKTSFCFPGKLPDASDPLPRAGGRGPPQGSWVQTSGLDHRKVSA- 758
P S + AC P S P A +P P P S Q ++A
Sbjct: 1535 PGLNSTVAPACSPVLVPAS-ALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAP 1593
Query: 759 ----LFPEQSWAPLGALRAICPSVEHCTSSRWCLALARRAGTDVPTQ-PSASPGLCLAST 813
L P + PL L + PS + + T VP PS++PG LAS
Sbjct: 1594 QTAILAPSPA-PPLAPLPVLAPSPG-------AAPVLASSQTPVPVMAPSSTPGTSLASA 1645
Query: 814 PLTALGVPSVAPRTCTQVGFGSKKSEMQTPHTYQTHSNVTATKDTDTGQFPIRHLS 869
P +AP + + S + +P + QT + A T G P + LS
Sbjct: 1646 SPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLS 1701
Score = 32.0 bits (71), Expect = 2.8
Identities = 81/325 (24%), Positives = 107/325 (32%), Gaps = 51/325 (15%)
Query: 232 QPGIQPPAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWLTSPSQ 291
Q I P+P P LP +APS A P LA+ +P + +PS
Sbjct: 1594 QTAILAPSPAPPLAPLPVLAPSPGA---------------APVLASSQTPVP--VMAPSS 1636
Query: 292 THHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPLPSPRMGVSFGASLSLSFPV 351
T +A V P + +P PLPSP + + +L+
Sbjct: 1637 TP-----GTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALA--- 1688
Query: 352 CKMGGPRELMTWLGLQPLNPQEPGVGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPT 411
+GG T L L NP QG P + L L P + P P
Sbjct: 1689 PTLGGSSPSQT-LSLGTGNP---------QGPFPTQTL----SLTPASSLVPT-----PA 1729
Query: 412 LRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYK 471
+S GP P TL L P AP+ P A + L P L A+
Sbjct: 1730 QTLSLAPGPPLG-PTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTL 1788
Query: 472 ALSAGLVPSHKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPE 531
LS VP+ Q L S Q P+ Q A P+ + + E
Sbjct: 1789 TLSPAPVPTLGPAAAQ-TLALAPASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKDE 1847
Query: 532 PGPTRLQC--LLPRSTGT---GPEP 551
P L+ P ST T GP P
Sbjct: 1848 PDTLTLRSGPPSPPSTATSFGGPRP 1872
Score = 30.4 bits (67), Expect = 8.3
Identities = 39/137 (28%), Positives = 51/137 (37%), Gaps = 20/137 (14%)
Query: 436 PPAPSGPA--QQAASPFLPHWPHQEPQRSLDQAAQGYKALSAG--LVPSHKARTPQLDKG 491
P AP GP + P L P P + A+ A AG L+P+ + P
Sbjct: 1015 PRAPLGPVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPGP----- 1069
Query: 492 LLLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPT-RLQCLLPRSTGTGPE 550
+LLP QP SG +P+ +PL +GT P PT L+ P P
Sbjct: 1070 VLLPPLQPNSGSLPQ-------VLPSPLG---VLSGTSRPPTPTLSLKPTPPAPVRLSPA 1119
Query: 551 PGPTRFQCLLSAACSPG 567
P P L PG
Sbjct: 1120 PPPGSSSLLKPLTVPPG 1136
>gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
Length = 359
Score = 39.3 bits (90), Expect = 0.018
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 422 AATPFWTL--WLEAWLPPAPSGPAQQAASPFLP-HWPHQEPQRSLDQAAQGYKALSAGLV 478
A+ FW+ W E LP +P+ PA +SP P P Q Q + G +AL G +
Sbjct: 86 ASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSL 145
Query: 479 PSHKARTPQLDKGLLLPSAQPPSG---QVPREFKGTGP 513
P A+ P P+AQPPS + PR +G P
Sbjct: 146 P-EAAQPPS------RPAAQPPSRPAFRSPRPVRGPHP 176
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 38.9 bits (89), Expect = 0.023
Identities = 94/370 (25%), Positives = 113/370 (30%), Gaps = 93/370 (25%)
Query: 262 PHHVCLWSSGVPSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTS--FPGD 319
P H+ S +PS SP +SPSQ P + + AG S P
Sbjct: 823 PRHLKRLQSLIPSALGSASPA----SSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSS 878
Query: 320 SPVYVPGCCGHP-LPSPRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGK 378
S PG CG P P+P GV+ +GG L PL P
Sbjct: 879 SSSPPPGACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLTPLQP------- 931
Query: 379 TRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPA 438
G P+AA P PA
Sbjct: 932 -------------------------------------GARSPQAAQP----------SPA 944
Query: 439 PSGPAQQAASP--FLPHWPH-QEPQRSLDQAAQGYKALSAGLV---------PSHKARTP 486
P G P FLP P + P S Q Q LS GL P + P
Sbjct: 945 PPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPP 1004
Query: 487 QLDKGL---LLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTG-----PEPGPTRLQ 538
L G P P G + GP T P A R S G P P Q
Sbjct: 1005 SLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQ 1064
Query: 539 CLLPRSTGTGP-EPGPTRFQCLLSAACSP-----GAAV--GAGP--AGRMLMAEPLVTRG 588
+P+ GT P PG L +A P GA A P +G + A PL R
Sbjct: 1065 --VPQRRGTPPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRA 1122
Query: 589 GGNRLGEGTT 598
GG G G++
Sbjct: 1123 GGGSGGSGSS 1132
Score = 32.0 bits (71), Expect = 2.8
Identities = 38/149 (25%), Positives = 49/149 (32%), Gaps = 15/149 (10%)
Query: 424 TPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPSHKA 483
TP +W P + A + + L H P G L AG P H
Sbjct: 768 TPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPAAIFRPPPGSGLGNLGAGQTPRHLK 827
Query: 484 RTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLPR 543
R L L SA P S + + + LA G P LLP
Sbjct: 828 RLQSLIPS-ALGSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSP---------LLP- 876
Query: 544 STGTGPEPGPTRFQCLLSAACSPGAAVGA 572
S+ + P PG C +A +P A V A
Sbjct: 877 SSSSSPPPG----ACGSPSAPTPSAGVAA 901
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 38.9 bits (89), Expect = 0.023
Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 35/149 (23%)
Query: 437 PAPSGPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPSHKARTPQLDKGLLLPS 496
PA P +A P LP P + P R+ + + A + G+ + L LP
Sbjct: 33 PAVCSPTARAPPPILPA-PQRPPTRAREWEGAAWAAGATGVGAAL----------LALPG 81
Query: 497 AQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLPRSTGT-GPEPGPTR 555
++ G+VP F+ P GP PG PR+ G+ G EPGP R
Sbjct: 82 SRR-LGRVPLTFREASP---------------GPAPGA-------PRARGSCGREPGPRR 118
Query: 556 FQCLLSAACSPGAAVGAGPAGRMLMAEPL 584
+ SA P AA A P + +A L
Sbjct: 119 RRAPSSAGKRPAAAARAAPPRQRSLARCL 147
>gi|154090979 hypothetical protein LOC57481 [Homo sapiens]
Length = 1709
Score = 38.9 bits (89), Expect = 0.023
Identities = 61/248 (24%), Positives = 97/248 (39%), Gaps = 26/248 (10%)
Query: 673 GRCERVTVQPAVRVGRCEQATAQPAVQPSWVSVDSSACQPTRKKTSFCFPGKLPDASDPL 732
G+C Q + R + QA +P + V +S+ + R P ASD
Sbjct: 1283 GKCSSFKEQLSPR--QLSQALRKPEYEQKVSPVSASSPKEWRNSKKQLPPKHSSQASDRS 1340
Query: 733 ---PRAGGRGPPQGSWVQTSGLDHRKVSALFPEQSWAPLGALRAICPSVEHCTSSRWCLA 789
P+ +GP Q+SG H S+ F +Q + A SV S W L
Sbjct: 1341 KFQPQMSSKGPVNVPVKQSSGEKHLPSSSPFQQQVHSS-SVNAAARRSVFESNSDNWFLG 1399
Query: 790 L--ARRAGTDVPTQPSASPGLCLASTPLTALGVPSVAP--RTCTQVGFGSKKSEMQTPH- 844
A T +Q S +P + + P T G ++AP +T T G SKK ++++
Sbjct: 1400 RDEAFAIKTKKFSQGSKNPIKSIPA-PATKPGKFTIAPVRQTSTSGGIYSKKEDLESGDG 1458
Query: 845 TYQTHSNVTATKDTDTGQFPIRHLSSPPSMQLKD-------------YAPVDTAQGAGRR 891
H+N++ D + F +R +PPS + K P+ ++ G G +
Sbjct: 1459 NNNQHANLSNQDDVEK-LFGVRLKRAPPSQKYKSEKQDNFTQLASVPSGPISSSVGRGHK 1517
Query: 892 RRPLPQQL 899
R Q L
Sbjct: 1518 IRSTSQGL 1525
>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 38.5 bits (88), Expect = 0.030
Identities = 48/169 (28%), Positives = 64/169 (37%), Gaps = 28/169 (16%)
Query: 404 CQGGGYPTLRIS---GLD-GPKA--ATPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQ 457
C GGG ++RIS GL GP+A A FW + P + +A PHQ
Sbjct: 321 CSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQ 380
Query: 458 EPQRSLDQAAQGYKALSAGL-------------VPSHKARTPQLDKGLLLPSAQPPSGQV 504
R +A G LS L VP+ +R P P+ P+
Sbjct: 381 RGLRDGCPSAAG--RLSPALPAPSPREVTLGSHVPARVSRRPCPPT----PAELNPATSS 434
Query: 505 PREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLPRSTGTGPEPGP 553
PR P A + H T T P P P R + PR++ + P P P
Sbjct: 435 PRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR---PRTSASRPGPSP 480
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 38.5 bits (88), Expect = 0.030
Identities = 109/429 (25%), Positives = 144/429 (33%), Gaps = 67/429 (15%)
Query: 209 APLSNVVPTWAGATAGTQREGPSQPGIQPPAPLPQHRDL-PTVAPSSQALFLTPPHHVCL 267
+PL+ P A A + P P PP P P V+PS+ PP
Sbjct: 643 SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPP----- 697
Query: 268 WSSGVPSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGC 327
S P L PSP S SPS T P A +V P S P SP P
Sbjct: 698 -SLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPAS-PPMSPSATPPP 755
Query: 328 CGHPL---PSPRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPLN--PQEPGVGKTRQG 382
PL P ++ S ASL +S P+ K P + L PL P P +
Sbjct: 756 RVPPLLAAPPLQVPPSPPASLPMS-PLAK--PPPQAPPALATPPLQALPSPPASFPGQAP 812
Query: 383 QRPEEVLLLNDGLCPKTDFQPCQGG----------GYPTL---RISGLDGPKAAT--PFW 427
P L ++ P P PTL R GP + P
Sbjct: 813 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRL 872
Query: 428 TLWLEAWLPPAPS-GPAQQAASPFLPHWPHQEPQRSLDQAAQGYKALSAGLVPSHKARTP 486
TL L PP PS P+ + P L H S + +GY + G + + P
Sbjct: 873 TLALAPGPPPPPSRSPSSTLSGPDLA--GHSSSATSTPEELRGYDSGPEG--GAAASPPP 928
Query: 487 QLDKGLLLPSAQPPSGQVPREFKG-----------TGPYATNPLADHRKSTGTGPEPGPT 535
+ P+A P F+G TGP + + L ++ GPE
Sbjct: 929 DAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYET--EGPESATP 986
Query: 536 RLQCLLPRSTGTGPEPGPTRFQCLLSAACSPGAAVGAGPAGRMLMAEPLVTRGGGNRLGE 595
P + GP PG ++ A GAG + R P R G LG
Sbjct: 987 -----APGALDPGPSPG--------TSGGKAAAGAGAGASSR----SPKQARLGELPLGA 1029
Query: 596 -GTTLAQHL 603
++ QHL
Sbjct: 1030 LQASVVQHL 1038
Score = 35.0 bits (79), Expect = 0.34
Identities = 87/330 (26%), Positives = 103/330 (31%), Gaps = 41/330 (12%)
Query: 230 PSQPGIQPPAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSP-------K 282
PS P P P P AP S L PP V S PSL PSP
Sbjct: 358 PSPPATPPSQAPPSMTTPPMQAPPS--LQTIPPIQVP-HSLTSPSLQAPPSPLALSSLQA 414
Query: 283 LSWLTSPS--QTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPLPSP-RMGV 339
+ L SP+ TH + P S P DSP PL +P +
Sbjct: 415 TTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSP---------PLQAPLSLPA 465
Query: 340 SFGASLSLSFPVCKMGGPRELMTWLGLQPLNPQEPGVGKTRQGQRPEEVLLLNDGLCPKT 399
S SLS V + P + L L P + P E L P +
Sbjct: 466 SPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLET---QSSLAPPS 522
Query: 400 DFQPCQGGGYPTLR-ISGLDGPK---AATPFWTLWLEAWLPPAPSGPAQQAASPFL---P 452
P P L + L P A+ P T LE PAP P Q SP P
Sbjct: 523 LQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPC-PLQAPPSPLTTPPP 581
Query: 453 HWPHQ----EPQRSLDQAAQGYKALSAGLVPSHKARTPQLDKGLLLPSAQ----PPSGQV 504
P PQ A+ + L + + PQ L LP Q PP+
Sbjct: 582 ETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPP 641
Query: 505 PREFKGTGPYATNPLADHRKSTGTGPEPGP 534
P A N LA H P P P
Sbjct: 642 LSPLATPSPQAPNALAVHLLQAPFSPPPSP 671
>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 38.5 bits (88), Expect = 0.030
Identities = 48/169 (28%), Positives = 64/169 (37%), Gaps = 28/169 (16%)
Query: 404 CQGGGYPTLRIS---GLD-GPKA--ATPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQ 457
C GGG ++RIS GL GP+A A FW + P + +A PHQ
Sbjct: 321 CSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQ 380
Query: 458 EPQRSLDQAAQGYKALSAGL-------------VPSHKARTPQLDKGLLLPSAQPPSGQV 504
R +A G LS L VP+ +R P P+ P+
Sbjct: 381 RGLRDGCPSAAG--RLSPALPAPSPREVTLGSHVPARVSRRPCPPT----PAELNPATSS 434
Query: 505 PREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLPRSTGTGPEPGP 553
PR P A + H T T P P P R + PR++ + P P P
Sbjct: 435 PRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR---PRTSASRPGPSP 480
>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
Length = 536
Score = 38.5 bits (88), Expect = 0.030
Identities = 48/169 (28%), Positives = 64/169 (37%), Gaps = 28/169 (16%)
Query: 404 CQGGGYPTLRIS---GLD-GPKA--ATPFWTLWLEAWLPPAPSGPAQQAASPFLPHWPHQ 457
C GGG ++RIS GL GP+A A FW + P + +A PHQ
Sbjct: 358 CSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQ 417
Query: 458 EPQRSLDQAAQGYKALSAGL-------------VPSHKARTPQLDKGLLLPSAQPPSGQV 504
R +A G LS L VP+ +R P P+ P+
Sbjct: 418 RGLRDGCPSAAG--RLSPALPAPSPREVTLGSHVPARVSRRPCPPT----PAELNPATSS 471
Query: 505 PREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLPRSTGTGPEPGP 553
PR P A + H T T P P P R + PR++ + P P P
Sbjct: 472 PRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR---PRTSASRPGPSP 517
>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
Length = 2013
Score = 38.1 bits (87), Expect = 0.040
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 807 GLCLASTPLTALGVPS---VAPRTCTQVGFGSKKSEMQTPHTYQT-HSNVTATKDTDTGQ 862
G + STP+TA PS ++P T S+ + + T T T ++ T T T
Sbjct: 1846 GCPVTSTPVTAPSTPSGRAISPTQSTSSWQKSRTTTLVTTSTTSTPQTSTTYAHTTSTTS 1905
Query: 863 FPIRHLSSPPSMQLKDYAPVDTAQGAGRRRRPLP 896
P +S P+ + +P T G G P+P
Sbjct: 1906 APTARTTSAPTTRTTSASPASTTSGPGNTPSPVP 1939
Score = 30.8 bits (68), Expect = 6.3
Identities = 32/116 (27%), Positives = 37/116 (31%), Gaps = 5/116 (4%)
Query: 782 TSSRWCLALARRAGTDVPTQPSASPGLCLASTPLTALGVPSVAPRTCT-QVGFGSKKSEM 840
T+S AR SASP AST PS P T T S S
Sbjct: 1900 TTSTTSAPTARTTSAPTTRTTSASP----ASTTSGPGNTPSPVPTTSTISAPTTSITSAP 1955
Query: 841 QTPHTYQTHSNVTATKDTDTGQFPIRHLSSPPSMQLKDYAPVDTAQGAGRRRRPLP 896
T T S+ T+ T T P +S P T G G P+P
Sbjct: 1956 TTSTTSAPTSSTTSAPTTSTTSAPTSSTTSSPQTSTTSAPTTSTTSGPGTTPSPVP 2011
>gi|58331144 proline rich region 18 [Homo sapiens]
Length = 295
Score = 38.1 bits (87), Expect = 0.040
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 449 PFLPHWPHQEPQRSLDQAAQ-GYKALSAGLVPSHKARTPQLDKGLLLPSAQPPSGQVPRE 507
PF P P P A Q + +AG K R PQ +GLL S + + P
Sbjct: 2 PFPPMPPPPAPAPGAQAARQLPRRPCAAG---DKKKRPPQRPEGLLSSSWPSATLKRPPA 58
Query: 508 FKGTGPYATNPLADHRKSTGTGPEPGPTRLQ----CLLPRSTGTGPEPGPTRFQCLL--S 561
+G G T P A G P+ P+R + C PR G+G P T + +
Sbjct: 59 RRGPGLDRTQPPAP----PGVSPQALPSRARAPATCAPPRPAGSGHSPARTTYAATSAGT 114
Query: 562 AACSPGAAVGAGP 574
+ G + GAGP
Sbjct: 115 GTTAAGTSSGAGP 127
>gi|13899269 SRY-box 7 [Homo sapiens]
Length = 388
Score = 37.7 bits (86), Expect = 0.052
Identities = 41/153 (26%), Positives = 56/153 (36%), Gaps = 9/153 (5%)
Query: 202 GLLLVLHAPLSNVVPTWAGATAGTQREGPSQPGIQPPAPLPQHRDLPTVAPSSQALFLTP 261
G LL + N +P + G E + P LP R P+ TP
Sbjct: 132 GFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEGPAGGGGGGTP 191
Query: 262 PHHVCLWSSGVPSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSP 321
V + G+P T P + P QT C+E+ +R+ G + SP
Sbjct: 192 SS-VDTYPYGLP---TPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPY---SP 244
Query: 322 VYVPGC--CGHPLPSPRMGVSFGASLSLSFPVC 352
Y P C HPL S +G S G S+ P C
Sbjct: 245 EYAPSPLHCSHPLGSLALGQSPGVSMMSPVPGC 277
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 37.7 bits (86), Expect = 0.052
Identities = 81/341 (23%), Positives = 111/341 (32%), Gaps = 66/341 (19%)
Query: 273 PSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPL 332
PS GPSP SP + P + S G SP P GHP+
Sbjct: 16 PSPGPGPSPGAMLGPSPGPS-----------------PGSAHSMMGPSPG--PPSAGHPI 56
Query: 333 PSPRMGVSFGASLSLSFP---VCKMGGPRELMTWLGLQ--PLNPQEPGVGKTRQGQRPEE 387
P+ G +P + +M P E M G+ P Q G+G G
Sbjct: 57 PTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHA--- 104
Query: 388 VLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAA 447
G+ P GYP+ + G + + P + P G A
Sbjct: 105 ------GMGPPPSPMDQHSQGYPS-PLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGA 157
Query: 448 SPFLPHWPHQEP----QRSLDQAA---QGYKALSAGL-VPSH-----KARTPQLDKGLLL 494
P ++ P Q L Q YK L+ G +P H + + P +
Sbjct: 158 DPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQM 217
Query: 495 PSAQPPS--------GQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLP-RST 545
P+ PPS G P G GP N H P PGP+ + +P +
Sbjct: 218 PTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
Query: 546 GTGPEPGPTRFQCLLSAACS-PGAAVGAGPAGRMLMAEPLV 585
G P+P P +A S P + P GR A P V
Sbjct: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 37.4 bits (85), Expect = 0.068
Identities = 72/281 (25%), Positives = 99/281 (35%), Gaps = 57/281 (20%)
Query: 310 PWAGTSFPGDSPVYVPGCCGHPLPSPRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPL 369
P GT PG SP PG P P +G S G S + M GP G P+
Sbjct: 7 PLGGTPRPGPSPG--PG----PSPGAMLGPSPGPSPGSAH---SMMGPSPGPPSAG-HPI 56
Query: 370 NPQEPG---VGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPF 426
Q PG Q +P E + G+ + +G G + +G+ P +
Sbjct: 57 PTQGPGGYPQDNMHQMHKPMESMH-EKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ 115
Query: 427 WTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRS-------LDQA-AQGYKALSAGLV 478
+ P+P G ++ A+SP P PQ S LD A Q + G
Sbjct: 116 HSQGY-----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT 170
Query: 479 PSHKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQ 538
P ++ + QL + ++ GQ PL DH + G P P Q
Sbjct: 171 PFNQNQLHQL-RAQIMAYKMLARGQ--------------PLPDHLQMAVQGKRPMPGMQQ 215
Query: 539 CL----LPRSTGTGPEPGPTRFQCLLSAACSPGAAVGAGPA 575
+ P + TGP PGP PG G GPA
Sbjct: 216 QMPTLPPPSVSATGPGPGP-----------GPGPGPGPGPA 245
Score = 31.6 bits (70), Expect = 3.7
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Query: 230 PSQPGIQPPAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWLT-S 288
P QP PP P P+ AP+S L PP S P++ SP + T S
Sbjct: 273 PGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQS 332
Query: 289 PSQTHHPWGCREDMAEQKRVCP 310
P Q P +Q R+ P
Sbjct: 333 PGQPAQPAPMVPLHQKQSRITP 354
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 37.7 bits (86), Expect = 0.052
Identities = 81/341 (23%), Positives = 111/341 (32%), Gaps = 66/341 (19%)
Query: 273 PSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPL 332
PS GPSP SP + P + S G SP P GHP+
Sbjct: 16 PSPGPGPSPGAMLGPSPGPS-----------------PGSAHSMMGPSPG--PPSAGHPI 56
Query: 333 PSPRMGVSFGASLSLSFP---VCKMGGPRELMTWLGLQ--PLNPQEPGVGKTRQGQRPEE 387
P+ G +P + +M P E M G+ P Q G+G G
Sbjct: 57 PTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHA--- 104
Query: 388 VLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAA 447
G+ P GYP+ + G + + P + P G A
Sbjct: 105 ------GMGPPPSPMDQHSQGYPS-PLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGA 157
Query: 448 SPFLPHWPHQEP----QRSLDQAA---QGYKALSAGL-VPSH-----KARTPQLDKGLLL 494
P ++ P Q L Q YK L+ G +P H + + P +
Sbjct: 158 DPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQM 217
Query: 495 PSAQPPS--------GQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLP-RST 545
P+ PPS G P G GP N H P PGP+ + +P +
Sbjct: 218 PTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
Query: 546 GTGPEPGPTRFQCLLSAACS-PGAAVGAGPAGRMLMAEPLV 585
G P+P P +A S P + P GR A P V
Sbjct: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 37.4 bits (85), Expect = 0.068
Identities = 72/281 (25%), Positives = 99/281 (35%), Gaps = 57/281 (20%)
Query: 310 PWAGTSFPGDSPVYVPGCCGHPLPSPRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPL 369
P GT PG SP PG P P +G S G S + M GP G P+
Sbjct: 7 PLGGTPRPGPSPG--PG----PSPGAMLGPSPGPSPGSAH---SMMGPSPGPPSAG-HPI 56
Query: 370 NPQEPG---VGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPF 426
Q PG Q +P E + G+ + +G G + +G+ P +
Sbjct: 57 PTQGPGGYPQDNMHQMHKPMESMH-EKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ 115
Query: 427 WTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRS-------LDQA-AQGYKALSAGLV 478
+ P+P G ++ A+SP P PQ S LD A Q + G
Sbjct: 116 HSQGY-----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT 170
Query: 479 PSHKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQ 538
P ++ + QL + ++ GQ PL DH + G P P Q
Sbjct: 171 PFNQNQLHQL-RAQIMAYKMLARGQ--------------PLPDHLQMAVQGKRPMPGMQQ 215
Query: 539 CL----LPRSTGTGPEPGPTRFQCLLSAACSPGAAVGAGPA 575
+ P + TGP PGP PG G GPA
Sbjct: 216 QMPTLPPPSVSATGPGPGP-----------GPGPGPGPGPA 245
Score = 31.6 bits (70), Expect = 3.7
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Query: 230 PSQPGIQPPAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWLT-S 288
P QP PP P P+ AP+S L PP S P++ SP + T S
Sbjct: 273 PGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQS 332
Query: 289 PSQTHHPWGCREDMAEQKRVCP 310
P Q P +Q R+ P
Sbjct: 333 PGQPAQPAPMVPLHQKQSRITP 354
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 37.7 bits (86), Expect = 0.052
Identities = 81/341 (23%), Positives = 111/341 (32%), Gaps = 66/341 (19%)
Query: 273 PSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPL 332
PS GPSP SP + P + S G SP P GHP+
Sbjct: 16 PSPGPGPSPGAMLGPSPGPS-----------------PGSAHSMMGPSPG--PPSAGHPI 56
Query: 333 PSPRMGVSFGASLSLSFP---VCKMGGPRELMTWLGLQ--PLNPQEPGVGKTRQGQRPEE 387
P+ G +P + +M P E M G+ P Q G+G G
Sbjct: 57 PTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHA--- 104
Query: 388 VLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAA 447
G+ P GYP+ + G + + P + P G A
Sbjct: 105 ------GMGPPPSPMDQHSQGYPS-PLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGA 157
Query: 448 SPFLPHWPHQEP----QRSLDQAA---QGYKALSAGL-VPSH-----KARTPQLDKGLLL 494
P ++ P Q L Q YK L+ G +P H + + P +
Sbjct: 158 DPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQM 217
Query: 495 PSAQPPS--------GQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLP-RST 545
P+ PPS G P G GP N H P PGP+ + +P +
Sbjct: 218 PTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
Query: 546 GTGPEPGPTRFQCLLSAACS-PGAAVGAGPAGRMLMAEPLV 585
G P+P P +A S P + P GR A P V
Sbjct: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 37.4 bits (85), Expect = 0.068
Identities = 72/281 (25%), Positives = 99/281 (35%), Gaps = 57/281 (20%)
Query: 310 PWAGTSFPGDSPVYVPGCCGHPLPSPRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPL 369
P GT PG SP PG P P +G S G S + M GP G P+
Sbjct: 7 PLGGTPRPGPSPG--PG----PSPGAMLGPSPGPSPGSAH---SMMGPSPGPPSAG-HPI 56
Query: 370 NPQEPG---VGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPF 426
Q PG Q +P E + G+ + +G G + +G+ P +
Sbjct: 57 PTQGPGGYPQDNMHQMHKPMESMH-EKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ 115
Query: 427 WTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRS-------LDQA-AQGYKALSAGLV 478
+ P+P G ++ A+SP P PQ S LD A Q + G
Sbjct: 116 HSQGY-----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT 170
Query: 479 PSHKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQ 538
P ++ + QL + ++ GQ PL DH + G P P Q
Sbjct: 171 PFNQNQLHQL-RAQIMAYKMLARGQ--------------PLPDHLQMAVQGKRPMPGMQQ 215
Query: 539 CL----LPRSTGTGPEPGPTRFQCLLSAACSPGAAVGAGPA 575
+ P + TGP PGP PG G GPA
Sbjct: 216 QMPTLPPPSVSATGPGPGP-----------GPGPGPGPGPA 245
Score = 31.6 bits (70), Expect = 3.7
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Query: 230 PSQPGIQPPAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWLT-S 288
P QP PP P P+ AP+S L PP S P++ SP + T S
Sbjct: 273 PGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQS 332
Query: 289 PSQTHHPWGCREDMAEQKRVCP 310
P Q P +Q R+ P
Sbjct: 333 PGQPAQPAPMVPLHQKQSRITP 354
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 37.7 bits (86), Expect = 0.052
Identities = 81/341 (23%), Positives = 111/341 (32%), Gaps = 66/341 (19%)
Query: 273 PSLATGPSPKLSWLTSPSQTHHPWGCREDMAEQKRVCPWAGTSFPGDSPVYVPGCCGHPL 332
PS GPSP SP + P + S G SP P GHP+
Sbjct: 16 PSPGPGPSPGAMLGPSPGPS-----------------PGSAHSMMGPSPG--PPSAGHPI 56
Query: 333 PSPRMGVSFGASLSLSFP---VCKMGGPRELMTWLGLQ--PLNPQEPGVGKTRQGQRPEE 387
P+ G +P + +M P E M G+ P Q G+G G
Sbjct: 57 PTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHA--- 104
Query: 388 VLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPFWTLWLEAWLPPAPSGPAQQAA 447
G+ P GYP+ + G + + P + P G A
Sbjct: 105 ------GMGPPPSPMDQHSQGYPS-PLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGA 157
Query: 448 SPFLPHWPHQEP----QRSLDQAA---QGYKALSAGL-VPSH-----KARTPQLDKGLLL 494
P ++ P Q L Q YK L+ G +P H + + P +
Sbjct: 158 DPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQM 217
Query: 495 PSAQPPS--------GQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQCLLP-RST 545
P+ PPS G P G GP N H P PGP+ + +P +
Sbjct: 218 PTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP 277
Query: 546 GTGPEPGPTRFQCLLSAACS-PGAAVGAGPAGRMLMAEPLV 585
G P+P P +A S P + P GR A P V
Sbjct: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 37.4 bits (85), Expect = 0.068
Identities = 72/281 (25%), Positives = 99/281 (35%), Gaps = 57/281 (20%)
Query: 310 PWAGTSFPGDSPVYVPGCCGHPLPSPRMGVSFGASLSLSFPVCKMGGPRELMTWLGLQPL 369
P GT PG SP PG P P +G S G S + M GP G P+
Sbjct: 7 PLGGTPRPGPSPG--PG----PSPGAMLGPSPGPSPGSAH---SMMGPSPGPPSAG-HPI 56
Query: 370 NPQEPG---VGKTRQGQRPEEVLLLNDGLCPKTDFQPCQGGGYPTLRISGLDGPKAATPF 426
Q PG Q +P E + G+ + +G G + +G+ P +
Sbjct: 57 PTQGPGGYPQDNMHQMHKPMESMH-EKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ 115
Query: 427 WTLWLEAWLPPAPSGPAQQAASPFLPHWPHQEPQRS-------LDQA-AQGYKALSAGLV 478
+ P+P G ++ A+SP P PQ S LD A Q + G
Sbjct: 116 HSQGY-----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT 170
Query: 479 PSHKARTPQLDKGLLLPSAQPPSGQVPREFKGTGPYATNPLADHRKSTGTGPEPGPTRLQ 538
P ++ + QL + ++ GQ PL DH + G P P Q
Sbjct: 171 PFNQNQLHQL-RAQIMAYKMLARGQ--------------PLPDHLQMAVQGKRPMPGMQQ 215
Query: 539 CL----LPRSTGTGPEPGPTRFQCLLSAACSPGAAVGAGPA 575
+ P + TGP PGP PG G GPA
Sbjct: 216 QMPTLPPPSVSATGPGPGP-----------GPGPGPGPGPA 245
Score = 31.6 bits (70), Expect = 3.7
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Query: 230 PSQPGIQPPAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGPSPKLSWLT-S 288
P QP PP P P+ AP+S L PP S P++ SP + T S
Sbjct: 273 PGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQS 332
Query: 289 PSQTHHPWGCREDMAEQKRVCP 310
P Q P +Q R+ P
Sbjct: 333 PGQPAQPAPMVPLHQKQSRITP 354
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,797,910
Number of Sequences: 37866
Number of extensions: 2945400
Number of successful extensions: 12796
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 241
Number of HSP's that attempted gapping in prelim test: 12003
Number of HSP's gapped (non-prelim): 999
length of query: 959
length of database: 18,247,518
effective HSP length: 112
effective length of query: 847
effective length of database: 14,006,526
effective search space: 11863527522
effective search space used: 11863527522
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.